View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4793-Insertion-23 (Length: 331)
Name: NF4793-Insertion-23
Description: NF4793
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4793-Insertion-23 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 8 - 331
Target Start/End: Original strand, 2572212 - 2572542
Alignment:
| Q |
8 |
atggattccacgaagtgcaatattaatgttttctctttctttcaagcatgatccctcataatttattgtttcaaattctcaatcttttatggagtattta |
107 |
Q |
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| T |
2572212 |
atggattccacgaagtgcattattaatcttttctctttctttcaagcatgatccctcataatttattgtttcaaattctcaatcttttatggagtattta |
2572311 |
T |
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| Q |
108 |
attttctgtcatttaattccatgatgannnnnnnnnnn-------ggtgaataattccatatgatgaattttatcacatgcctttgagttcataattagg |
200 |
Q |
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| T |
2572312 |
attttctgtcatttaattccatgatgattttttttttttttttttggtgaataattacatatgatgaattttatcacatgcctttgagttcataattagg |
2572411 |
T |
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| Q |
201 |
ctttgctacaataacagcaacatggagttaacttcatccaatgtgtccatactatgttctgctgctcaatttttggagatggaagagtgtgatagtctag |
300 |
Q |
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| T |
2572412 |
ctttgctacaataacagcaacatggagttaacttcatccaatgtgtccatgctatgttctgctgctcaatttttggagatggaagagtgtgatagtctag |
2572511 |
T |
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| Q |
301 |
aagcaccaagcttgaagcctcatattgaaaa |
331 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
2572512 |
aagcaccaagcttgaagcctcatattgaaaa |
2572542 |
T |
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