View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4793_high_16 (Length: 325)
Name: NF4793_high_16
Description: NF4793
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4793_high_16 |
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Alignment Details
Target: chr6 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 6 - 310
Target Start/End: Complemental strand, 27773489 - 27773185
Alignment:
| Q |
6 |
agaagcaaagggagacagaaaaccatgcagaatccaattgataaatcataaaccagttgatattgatggatgaacatgagcttctacacactactagtgt |
105 |
Q |
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| T |
27773489 |
agaaacaaagggagacagaaaaccatgcagaatccaattgataaatcataaaccagttgatattgatggatgaacatgagcttctacacactactagtgt |
27773390 |
T |
|
| Q |
106 |
agtgattcagaagtcagcacatggaaaggctcaaaatttaactggcacagattattagctcaactactcattacttctatgataagtattttctaagttc |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27773389 |
agtgattcagaagtcagcacatggaaaggctcaaaatttaactggcacagattattagctcaactactcattacttctatgataagtattttctaagttc |
27773290 |
T |
|
| Q |
206 |
caactactcaaacaccaaaagctgaaccatcggagctatagctaacagtaacaccgtgacttcctaacctcaaccagtaggaattcaacttaccattaat |
305 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
27773289 |
caactactcaaacaccaaaagctgaaccaacggagctatagctaacagtaacaccgtgacttcctaacctcaaccagtaggaattcaacttatcattaat |
27773190 |
T |
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| Q |
306 |
gtttt |
310 |
Q |
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||||| |
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| T |
27773189 |
gtttt |
27773185 |
T |
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