View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4793_high_35 (Length: 209)
Name: NF4793_high_35
Description: NF4793
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4793_high_35 |
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Alignment Details
Target: chr4 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 45745516 - 45745699
Alignment:
| Q |
9 |
agagagaagaagaaagctttaatagtagtttccacaaaaaacattcctcacagaaaagcacaaaatgcaataagagacaactaaacgaaaaatcgatggt |
108 |
Q |
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| T |
45745516 |
agagaaaagaagaaagctttaatagtagtttccacaaaaaacattcctcacagaaaagcacaaaatgcaataagagacaactaaacgaaaaatcgatggt |
45745615 |
T |
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| Q |
109 |
cgatgacaaaaatggtgttccaactgtgaacaagtttgatgaatcaagtaggtcattttttccggatgacgattatatagtatt |
192 |
Q |
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| T |
45745616 |
cgatgacaaaaatggtgttccaactgtgaacaagtttgatgaatcaagtaggtcattttttccggatgacgattatatagtatt |
45745699 |
T |
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