View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4793_low_34 (Length: 225)
Name: NF4793_low_34
Description: NF4793
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4793_low_34 |
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Alignment Details
Target: chr1 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 2879555 - 2879769
Alignment:
| Q |
1 |
tttggctttatatggacgggcgtgggagcttaaggatccaaatgtcaatggggtgggagcggaggcagtggggcctgcaactgacacggatggtagtatg |
100 |
Q |
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| T |
2879555 |
tttggctttatatggacgggcgtgggagcttaaggatccaaatgtcaacggggtgggagcggaggcggtggggcctgcaactgacacggatggtagtatg |
2879654 |
T |
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| Q |
101 |
aattataatgagattttgaaatttaacaaacagagtggtgctaatgttgtgtatgataaggttgctatatctttttattcttatgcgggtacgacttgga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2879655 |
aattataatgagattttgaaatttaacaaacagagtggtgctaatgttgtgtatgataaggttgctatatctttttattcttatgcgggtacgacttgga |
2879754 |
T |
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| Q |
201 |
tcgggtatgatgatg |
215 |
Q |
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||||||||||||||| |
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| T |
2879755 |
tcgggtatgatgatg |
2879769 |
T |
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