View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4794_low_1 (Length: 332)

Name: NF4794_low_1
Description: NF4794
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4794_low_1
NF4794_low_1
[»] chr3 (30 HSPs)
chr3 (159-314)||(9236052-9236207)
chr3 (20-117)||(9236232-9236329)
chr3 (158-278)||(21662888-21663007)
chr3 (161-278)||(54537445-54537561)
chr3 (161-255)||(52864975-52865069)
chr3 (159-272)||(51723386-51723498)
chr3 (158-278)||(51516960-51517078)
chr3 (158-278)||(53441934-53442053)
chr3 (158-244)||(23222985-23223071)
chr3 (158-275)||(12747724-12747840)
chr3 (160-237)||(25954051-25954128)
chr3 (160-272)||(44518044-44518155)
chr3 (158-244)||(19649606-19649692)
chr3 (158-263)||(12064936-12065040)
chr3 (161-248)||(2544489-2544577)
chr3 (159-275)||(45010778-45010893)
chr3 (159-210)||(20028499-20028549)
chr3 (159-209)||(9197109-9197159)
chr3 (160-278)||(36985158-36985275)
chr3 (160-278)||(37010597-37010714)
chr3 (158-249)||(8266263-8266352)
chr3 (159-271)||(43448967-43449078)
chr3 (164-276)||(49885383-49885493)
chr3 (158-221)||(47720727-47720790)
chr3 (164-246)||(32711235-32711317)
chr3 (187-276)||(5177822-5177909)
chr3 (167-263)||(29290795-29290890)
chr3 (164-276)||(29457873-29457983)
chr3 (166-246)||(48593175-48593255)
chr3 (214-278)||(53703813-53703877)
[»] chr2 (48 HSPs)
chr2 (158-263)||(11030219-11030323)
chr2 (158-278)||(41153138-41153257)
chr2 (158-263)||(11182192-11182297)
chr2 (158-275)||(38554485-38554601)
chr2 (159-278)||(7943467-7943586)
chr2 (159-278)||(12873725-12873843)
chr2 (158-255)||(12962729-12962826)
chr2 (158-269)||(4410804-4410915)
chr2 (159-269)||(38983027-38983136)
chr2 (158-246)||(9152406-9152494)
chr2 (159-255)||(32457241-32457337)
chr2 (164-278)||(22333558-22333671)
chr2 (158-275)||(20555263-20555378)
chr2 (159-275)||(5109368-5109483)
chr2 (159-274)||(5281206-5281319)
chr2 (158-209)||(29988962-29989013)
chr2 (159-255)||(28248961-28249057)
chr2 (165-237)||(35728499-35728571)
chr2 (164-276)||(45034402-45034512)
chr2 (159-246)||(10204959-10205046)
chr2 (161-244)||(39118049-39118132)
chr2 (158-244)||(3837437-3837523)
chr2 (159-269)||(30758748-30758856)
chr2 (161-255)||(39445019-39445113)
chr2 (158-278)||(36881535-36881648)
chr2 (158-238)||(2936334-2936414)
chr2 (158-278)||(11794452-11794570)
chr2 (214-278)||(42698147-42698210)
chr2 (164-276)||(45571034-45571144)
chr2 (164-276)||(45574701-45574811)
chr2 (164-276)||(45578368-45578478)
chr2 (164-276)||(45582035-45582145)
chr2 (164-276)||(45585702-45585812)
chr2 (164-276)||(45589369-45589479)
chr2 (164-276)||(45593036-45593146)
chr2 (164-276)||(45596703-45596813)
chr2 (164-276)||(45600370-45600480)
chr2 (164-276)||(45604037-45604147)
chr2 (164-276)||(45607704-45607814)
chr2 (164-276)||(45611371-45611481)
chr2 (164-276)||(45615038-45615148)
chr2 (189-244)||(7833317-7833372)
chr2 (158-209)||(28494774-28494825)
chr2 (158-276)||(30761382-30761499)
chr2 (159-205)||(32487064-32487110)
chr2 (161-246)||(41153144-41153229)
chr2 (161-209)||(12486062-12486110)
chr2 (159-255)||(33824374-33824470)
[»] chr7 (34 HSPs)
chr7 (158-285)||(28677344-28677470)
chr7 (158-278)||(36245403-36245522)
chr7 (158-262)||(29365648-29365751)
chr7 (158-243)||(6838411-6838496)
chr7 (158-278)||(2523797-2523916)
chr7 (158-269)||(8566108-8566218)
chr7 (158-269)||(11668042-11668152)
chr7 (158-278)||(13807244-13807359)
chr7 (158-255)||(41850620-41850717)
chr7 (158-256)||(39153314-39153412)
chr7 (159-263)||(32811738-32811840)
chr7 (159-209)||(2680886-2680936)
chr7 (158-244)||(48838347-48838433)
chr7 (166-283)||(10007611-10007727)
chr7 (161-278)||(10462379-10462495)
chr7 (164-285)||(32811411-32811530)
chr7 (159-256)||(45441464-45441561)
chr7 (158-278)||(24163270-24163390)
chr7 (158-246)||(30869213-30869301)
chr7 (158-266)||(45533244-45533351)
chr7 (159-255)||(48082823-48082918)
chr7 (158-284)||(40142800-40142925)
chr7 (158-246)||(2399979-2400067)
chr7 (166-237)||(2610229-2610300)
chr7 (167-246)||(30823742-30823821)
chr7 (173-255)||(34117981-34118063)
chr7 (216-278)||(43174363-43174425)
chr7 (166-275)||(44682571-44682679)
chr7 (159-283)||(9979829-9979951)
chr7 (164-276)||(27231867-27231977)
chr7 (158-209)||(28298924-28298975)
chr7 (216-278)||(32811380-32811441)
chr7 (158-256)||(40176063-40176161)
chr7 (164-281)||(45123244-45123360)
[»] chr1 (33 HSPs)
chr1 (158-256)||(38590093-38590191)
chr1 (158-274)||(519860-519975)
chr1 (158-276)||(38040303-38040420)
chr1 (158-269)||(38737958-38738068)
chr1 (158-271)||(34146832-34146943)
chr1 (158-246)||(26070857-26070945)
chr1 (158-278)||(26924215-26924334)
chr1 (158-274)||(49944839-49944954)
chr1 (158-244)||(44939093-44939179)
chr1 (166-276)||(50155333-50155442)
chr1 (159-263)||(8971245-8971348)
chr1 (158-278)||(26760200-26760319)
chr1 (158-246)||(34332509-34332597)
chr1 (158-244)||(6661549-6661635)
chr1 (159-255)||(15342961-15343057)
chr1 (158-237)||(15286036-15286115)
chr1 (166-285)||(29256634-29256751)
chr1 (158-263)||(11386171-11386275)
chr1 (175-248)||(25554570-25554643)
chr1 (161-249)||(34146835-34146922)
chr1 (164-276)||(43929379-43929489)
chr1 (164-244)||(23923585-23923665)
chr1 (164-276)||(34662686-34662796)
chr1 (164-276)||(47678289-47678399)
chr1 (167-206)||(9387259-9387298)
chr1 (217-283)||(2351130-2351195)
chr1 (216-278)||(26924298-26924359)
chr1 (158-255)||(6793618-6793715)
chr1 (216-281)||(26760172-26760236)
chr1 (159-255)||(27819339-27819436)
chr1 (159-255)||(24305693-24305789)
chr1 (164-276)||(47844538-47844648)
chr1 (160-196)||(52427376-52427412)
[»] chr4 (38 HSPs)
chr4 (158-278)||(44111772-44111891)
chr4 (158-274)||(42670770-42670885)
chr4 (158-278)||(48361054-48361173)
chr4 (158-278)||(53225671-53225790)
chr4 (159-270)||(21554137-21554246)
chr4 (158-278)||(48195892-48196011)
chr4 (159-246)||(25477573-25477660)
chr4 (158-269)||(30191907-30192017)
chr4 (159-281)||(45828443-45828564)
chr4 (159-255)||(4386160-4386256)
chr4 (158-274)||(32714296-32714411)
chr4 (189-276)||(41116566-41116652)
chr4 (158-269)||(42169070-42169180)
chr4 (166-276)||(42804260-42804368)
chr4 (158-274)||(8347651-8347766)
chr4 (158-278)||(47943729-47943848)
chr4 (160-281)||(696379-696499)
chr4 (160-281)||(764677-764797)
chr4 (158-263)||(3162912-3163016)
chr4 (159-276)||(16412238-16412354)
chr4 (164-277)||(43020759-43020870)
chr4 (166-263)||(43117889-43117985)
chr4 (166-246)||(25700486-25700566)
chr4 (159-263)||(36132663-36132766)
chr4 (159-238)||(35429801-35429880)
chr4 (164-238)||(26066410-26066484)
chr4 (158-244)||(45096609-45096695)
chr4 (159-244)||(9044415-9044500)
chr4 (158-211)||(19150791-19150844)
chr4 (158-255)||(50121461-50121558)
chr4 (187-275)||(9894630-9894717)
chr4 (159-223)||(17284763-17284827)
chr4 (164-276)||(20459274-20459384)
chr4 (164-276)||(47866040-47866150)
chr4 (159-246)||(55951690-55951777)
chr4 (164-274)||(20745365-20745473)
chr4 (214-283)||(24100756-24100824)
chr4 (160-209)||(44061417-44061466)
[»] chr8 (27 HSPs)
chr8 (158-255)||(16448816-16448913)
chr8 (158-276)||(5031468-5031585)
chr8 (158-274)||(7693060-7693175)
chr8 (158-269)||(15720210-15720320)
chr8 (159-276)||(10184579-10184695)
chr8 (160-256)||(42122995-42123091)
chr8 (160-243)||(24618987-24619070)
chr8 (167-269)||(10839774-10839875)
chr8 (158-275)||(8453622-8453737)
chr8 (159-243)||(8793755-8793839)
chr8 (159-255)||(8803252-8803348)
chr8 (158-278)||(35149695-35149814)
chr8 (158-255)||(32597525-32597622)
chr8 (159-255)||(40483311-40483407)
chr8 (173-244)||(27789314-27789385)
chr8 (160-278)||(1223125-1223242)
chr8 (164-274)||(12958782-12958890)
chr8 (159-283)||(3236329-3236450)
chr8 (164-276)||(6899424-6899534)
chr8 (166-274)||(24915205-24915311)
chr8 (214-275)||(4156385-4156446)
chr8 (216-276)||(8803313-8803372)
chr8 (225-273)||(15726853-15726900)
chr8 (190-262)||(22193619-22193690)
chr8 (164-256)||(34711104-34711196)
chr8 (159-238)||(36191775-36191852)
chr8 (164-276)||(36366058-36366168)
[»] chr5 (29 HSPs)
chr5 (158-278)||(38394430-38394549)
chr5 (159-243)||(919670-919754)
chr5 (158-246)||(18473508-18473596)
chr5 (158-275)||(5002167-5002283)
chr5 (166-278)||(11931971-11932083)
chr5 (158-244)||(33478142-33478228)
chr5 (159-278)||(34297202-34297323)
chr5 (158-278)||(13789759-13789878)
chr5 (159-255)||(36434706-36434802)
chr5 (159-278)||(21488311-21488429)
chr5 (165-263)||(39239811-39239909)
chr5 (161-246)||(36286089-36286174)
chr5 (158-206)||(18391525-18391573)
chr5 (158-209)||(13664973-13665024)
chr5 (189-256)||(14723409-14723476)
chr5 (160-256)||(19295986-19296083)
chr5 (159-244)||(22101943-22102028)
chr5 (158-278)||(29299359-29299479)
chr5 (166-274)||(14913141-14913248)
chr5 (164-276)||(26327539-26327650)
chr5 (164-284)||(29031070-29031188)
chr5 (164-278)||(1015189-1015301)
chr5 (166-223)||(1248885-1248942)
chr5 (164-281)||(27488346-27488461)
chr5 (158-206)||(14221872-14221920)
chr5 (164-276)||(15968315-15968425)
chr5 (214-282)||(20502170-20502237)
chr5 (214-278)||(29002744-29002807)
chr5 (214-278)||(38978825-38978888)
[»] chr6 (16 HSPs)
chr6 (158-278)||(12999782-12999902)
chr6 (159-249)||(12450381-12450471)
chr6 (161-274)||(28630759-28630871)
chr6 (158-246)||(27909007-27909096)
chr6 (159-263)||(3064900-3065003)
chr6 (158-237)||(17265748-17265827)
chr6 (158-233)||(30627869-30627944)
chr6 (158-211)||(30895252-30895305)
chr6 (158-246)||(2972197-2972285)
chr6 (164-278)||(2230382-2230495)
chr6 (159-209)||(9077656-9077706)
chr6 (159-275)||(10283322-10283437)
chr6 (159-238)||(15467597-15467676)
chr6 (164-278)||(8646712-8646824)
chr6 (189-246)||(3673826-3673883)
chr6 (158-206)||(3046686-3046734)
[»] scaffold0110 (1 HSPs)
scaffold0110 (158-278)||(1560-1678)
[»] scaffold0236 (1 HSPs)
scaffold0236 (158-237)||(16678-16757)
[»] scaffold0136 (1 HSPs)
scaffold0136 (160-255)||(16553-16648)
[»] scaffold0238 (1 HSPs)
scaffold0238 (174-244)||(2539-2609)
[»] scaffold0070 (1 HSPs)
scaffold0070 (159-263)||(40162-40266)
[»] scaffold0086 (1 HSPs)
scaffold0086 (158-209)||(1507-1557)
[»] scaffold0001 (1 HSPs)
scaffold0001 (158-269)||(156795-156905)
[»] scaffold0123 (1 HSPs)
scaffold0123 (166-206)||(28124-28164)


Alignment Details
Target: chr3 (Bit Score: 128; Significance: 4e-66; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 159 - 314
Target Start/End: Complemental strand, 9236207 - 9236052
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttct 258  Q
    ||||||||||||||||||||||||||| |||| |||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  9236207 atttgacttttttgattcattacataaatgatatatttagtctatattctatatcagatacatcaattactcaatgaatcaaaaaagttaacttttttct 9236108  T
Q  259 tataagtaggatcggagggaataattagttattttaaaaatacacgtcattaattc 314  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  9236107 tataagtaggatcggagagaataattagttattttaaaaatacacatcattaattc 9236052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 9236329 - 9236232
Alignment:
Q  20 ctaaatactgcgttttgggttaaaccagttgaattatgagaagaaatcttgtatgatcatacgtatttggacactttattttggcaaacacgtataaa 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  9236329 ctaaatactgcgttttgggttaaaccagttgaattatgagaagaagtcttatatgatcattcgtatttggacactttattttggcaaacacgtataaa 9236232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 158 - 278
Target Start/End: Complemental strand, 21663007 - 21662888
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    ||||| |||||||||||||||| ||||| ||||||||||| |||||| |||||| ||  ||||| | |||||||||||||| ||||||| ||| ||||||    
T  21663007 catttaacttttttgattcattgcataaatgatgtatttggtctataatctataccaagtacattaattactcaatgaatctaaaaagtcaac-tttttc 21662909  T
Q  258 ttataagtaggatcggaggga 278  Q
    |||||| ||||| ||||||||    
T  21662908 ttataaataggaccggaggga 21662888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 161 - 278
Target Start/End: Complemental strand, 54537561 - 54537445
Alignment:
Q  161 ttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttctta 260  Q
    ||||||||||||||||||| ||||| |  |||||||||||||||||||| |  |||||||||| ||||||||||||||  |||||| ||  |||||||||    
T  54537561 ttgacttttttgattcattgcataaattgtgtatttgatctatattctagactagatacatcaattactcaatgaatcttaaaagtcaa-atttttctta 54537463  T
Q  261 taagtaggatcggaggga 278  Q
    ||| |||||||| |||||    
T  54537462 taaataggatcgaaggga 54537445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 161 - 255
Target Start/End: Complemental strand, 52865069 - 52864975
Alignment:
Q  161 ttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttt 255  Q
    ||||||||||||||||||| ||||| |||| |||||  |||||||| || || |||||||||| |||||||||||||| |||||||||| |||||    
T  52865069 ttgacttttttgattcattgcataaatgatatatttagtctatattttagataagatacatcaattactcaatgaatctaaaaagttaaattttt 52864975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 272
Target Start/End: Complemental strand, 51723498 - 51723386
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttct 258  Q
    |||| ||||||||||||||||  |||| |||| |||||  |||||||||||||||| |||||| | |||||||||||||| ||||| | ||| |||||||    
T  51723498 atttaacttttttgattcattgtataaatgatatatttagtctatattctatatcaaatacattaattactcaatgaatctaaaaaatcaac-tttttct 51723400  T
Q  259 tataagtaggatcg 272  Q
    ||||| ||||||||    
T  51723399 tataaataggatcg 51723386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 278
Target Start/End: Complemental strand, 51517078 - 51516960
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    ||||||||||||||| |||||| ||||| ||||||||||| ||||||||||||  ||  ||||| | |||||| || |||| ||||||| ||| ||||||    
T  51517078 catttgacttttttggttcattgcataaatgatgtatttggtctatattctatgccaagtacattaattactccat-aatctaaaaagtcaac-tttttc 51516981  T
Q  258 ttataagtaggatcggaggga 278  Q
    |||||| ||||| ||||||||    
T  51516980 ttataaataggaccggaggga 51516960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 278
Target Start/End: Original strand, 53441934 - 53442053
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    ||||| |||||||||||||||| ||||| ||||||||||| | || |||||||| ||  ||||| | ||| |||||||||  ||||||| ||| ||||||    
T  53441934 cattttacttttttgattcattgcataaatgatgtatttggtatacattctataccaagtacattaattattcaatgaatttaaaaagtcaac-tttttc 53442032  T
Q  258 ttataagtaggatcggaggga 278  Q
    |||||| ||||| ||||||||    
T  53442033 ttataaataggaccggaggga 53442053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 244
Target Start/End: Original strand, 23222985 - 23223071
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaa 244  Q
    |||||||||||||| ||| |||| |||| ||||||||||| |||||||| || |  |||||||||| |||||||||||||| |||||    
T  23222985 catttgacttttttaatttattatataaatgatgtatttggtctatattttagacaagatacatcagttactcaatgaatctaaaaa 23223071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 12747724 - 12747840
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    ||||||| |||||||||||||| ||||| |  |||||||| | ||||||||| | || |||||||| |||||| ||||||| ||||| | || |||||||    
T  12747724 catttgatttttttgattcattgcataaattgtgtatttggtgtatattctagaccaaatacatcaattactcgatgaatctaaaaaatcaa-ttttttc 12747822  T
Q  258 ttataagtaggatcggag 275  Q
    |||||| ||||| |||||    
T  12747823 ttataaataggaccggag 12747840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 160 - 237
Target Start/End: Original strand, 25954051 - 25954128
Alignment:
Q  160 tttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaat 237  Q
    |||||||||||| |||||||| |||| |||| |||||||||||||||||| |  |||||||| | |||||||||||||    
T  25954051 tttgacttttttaattcattatataaatgatatatttgatctatattctagacaagatacattaattactcaatgaat 25954128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 272
Target Start/End: Complemental strand, 44518155 - 44518044
Alignment:
Q  160 tttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttctt 259  Q
    ||||||||||||||||||||   ||| ||||||||||| |||||||| || |  |||||||| | |||||||||||||| ||||||| ||   |||||||    
T  44518155 tttgacttttttgattcattgtctaaatgatgtatttggtctatattttagacaagatacattaattactcaatgaatctaaaaagtcaa-agttttctt 44518057  T
Q  260 ataagtaggatcg 272  Q
    |||| ||||||||    
T  44518056 ataaataggatcg 44518044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 158 - 244
Target Start/End: Original strand, 19649606 - 19649692
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaa 244  Q
    ||||||||||||||||||||||  |||| ||||||||||  |||||||| || | |  |||||||| |||||||||||||| |||||    
T  19649606 catttgacttttttgattcattgaataattgatgtatttagtctatattttagaccgaatacatcaattactcaatgaatctaaaaa 19649692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 263
Target Start/End: Original strand, 12064936 - 12065040
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    ||||| |||||||||||||||| ||| | ||||||||||| |||||||||||||  | ||| || | ||||| |||||||  ||||||| || |||||||    
T  12064936 cattttacttttttgattcattgcattaatgatgtatttggtctatattctatactaaatatattaattacttaatgaatttaaaaagtcaa-ttttttc 12065034  T
Q  258 ttataa 263  Q
    ||||||    
T  12065035 ttataa 12065040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 161 - 248
Target Start/End: Complemental strand, 2544577 - 2544489
Alignment:
Q  161 ttgacttttttgattcattacataagtgatgtatttgatctatattctatatc-agatacatcatttactcaatgaatcaaaaaagtta 248  Q
    |||||||||| ||||||||  |||||||||||||||| |||||| | |||| | |||||||||| ||| |||||||| | |||||||||    
T  2544577 ttgactttttagattcattgtataagtgatgtatttggtctataatttataacaagatacatcaattattcaatgaacctaaaaagtta 2544489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 159 - 275
Target Start/End: Original strand, 45010778 - 45010893
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttct 258  Q
    ||||||||||||||||| |||  |||| |||||| | || ||||||||||| |  |||||||||| ||| ||||| |||| ||||| |||| |||| |||    
T  45010778 atttgacttttttgatttattgtataaatgatgtttgtggtctatattctaaactagatacatcaattattcaataaatctaaaaaattaa-ttttctct 45010876  T
Q  259 tataagtaggatcggag 275  Q
    ||||| ||||| |||||    
T  45010877 tataaataggaccggag 45010893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 20028499 - 20028549
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctat 210  Q
    ||||||||||||| ||||||| ||||| ||||||||||||||||||||||||    
T  20028499 atttgactttttt-attcatttcataaatgatgtatttgatctatattctat 20028549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 9197109 - 9197159
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattcta 209  Q
    ||||||||||||||||||||| ||||| ||||||||||  |||||||||||    
T  9197109 atttgacttttttgattcattgcataaatgatgtattttgtctatattcta 9197159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 278
Target Start/End: Complemental strand, 36985275 - 36985158
Alignment:
Q  160 tttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttctt 259  Q
    |||||||||||||||||||| ||||| | ||||||||  ||||||||||| |  |||||||| | |||  |||| ||||  |||| |||||  |||||||    
T  36985275 tttgacttttttgattcattgcataaataatgtatttagtctatattctaaacaagatacattaattatacaataaatcttaaaaattaac-attttctt 36985177  T
Q  260 ataagtaggatcggaggga 278  Q
    |||| ||||| ||||||||    
T  36985176 ataaataggaccggaggga 36985158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 278
Target Start/End: Complemental strand, 37010714 - 37010597
Alignment:
Q  160 tttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttctt 259  Q
    |||||||||||||||||||| ||||| | ||||||||  ||||||||||| |  |||||||| | |||  |||| ||||  |||| |||||  |||||||    
T  37010714 tttgacttttttgattcattgcataaataatgtatttagtctatattctaaacaagatacattaattatacaataaatcttaaaaattaac-attttctt 37010616  T
Q  260 ataagtaggatcggaggga 278  Q
    |||| ||||| ||||||||    
T  37010615 ataaataggaccggaggga 37010597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 249
Target Start/End: Complemental strand, 8266352 - 8266263
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaa 249  Q
    ||||||||||||||||||||||  |||| | |||| |||| |  ||||| || || | |||||||| |||||||||||||| ||||||||||    
T  8266352 catttgacttttttgattcattgtataaataatgtgtttggt--atattttagataaaatacatcaattactcaatgaatctaaaaagttaa 8266263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 271
Target Start/End: Complemental strand, 43449078 - 43448967
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttct 258  Q
    |||||| ||||||| ||||||  |||| ||||||||||| | |||||  || |  ||||| |||| |||||||||||||| ||||| | ||| |||||||    
T  43449078 atttgatttttttggttcattgtataaatgatgtatttggtttatatcatagacaagatatatcaattactcaatgaatctaaaaaatcaac-tttttct 43448980  T
Q  259 tataagtaggatc 271  Q
    ||||| |||||||    
T  43448979 tataaataggatc 43448967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 276
Target Start/End: Complemental strand, 49885493 - 49885383
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    |||||||||||| | |  |||| ||||||||||| ||||| ||||| |  |||||||||| ||| | |||||||| ||||| |||| |||||||||||||    
T  49885493 acttttttgattaagtggataattgatgtatttggtctat-ttctagactagatacatcaattattgaatgaatctaaaaaattaa-ttttttcttataa 49885396  T
Q  264 gtaggatcggagg 276  Q
     ||| ||||||||    
T  49885395 atagaatcggagg 49885383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 221
Target Start/End: Complemental strand, 47720790 - 47720727
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacat 221  Q
    ||||||| ||||| |||||||||||||| |||| |||||| | ||||||||||| || ||||||    
T  47720790 catttgattttttcgattcattacataaatgatatatttggtttatattctataccaaatacat 47720727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 246
Target Start/End: Original strand, 32711235 - 32711317
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagt 246  Q
    ||||||| | ||||||  |||| |||||||||||  ||||||| || | ||||||||||| ||| |||||||||| |||||||    
T  32711235 actttttaggttcattgaataattgatgtatttggcctatattatagaccagatacatcaattattcaatgaatctaaaaagt 32711317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 276
Target Start/End: Original strand, 5177822 - 5177909
Alignment:
Q  187 tgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataagtaggatcggagg 276  Q
    ||||||||||| ||||| |||||  | || ||||||| ||| | |||||||| |||||||||| ||||||||||||| ||||| ||||||    
T  5177822 tgatgtatttggtctat-ttctaagttaggtacatcaattattgaatgaatctaaaaagttaa-ttttttcttataaataggaccggagg 5177909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 263
Target Start/End: Complemental strand, 29290890 - 29290795
Alignment:
Q  167 tttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    ||||| |||||||  |||| | ||||||||  |||||| | || ||||||||||||| ||  |||||||||| ||||||| || |||||||||||||    
T  29290890 tttttaattcattgaataacttatgtatttagtctataatatagatcagatacatcagttgttcaatgaatctaaaaagtgaa-ttttttcttataa 29290795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 276
Target Start/End: Original strand, 29457873 - 29457983
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    ||||||||||||||||  |||  ||||||||||| ||||| ||||| |  || ||||||| | | | |||||||| ||||||||||| ||||||||||||    
T  29457873 acttttttgattcattgaatagttgatgtatttggtctat-ttctagactaggtacatcaatcattgaatgaatctaaaaagttaac-tttttcttataa 29457970  T
Q  264 gtaggatcggagg 276  Q
     ||| | ||||||    
T  29457971 atagaaccggagg 29457983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 48593255 - 48593175
Alignment:
Q  166 ttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagt 246  Q
    ||||| ||||||||  |||| | ||||||||| ||||||||||| | | ||||||||| ||| |||||| ||| |||||||    
T  48593255 tttttagattcattgaataatttatgtatttggtctatattctagacccgatacatcaattattcaatgtatctaaaaagt 48593175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 278
Target Start/End: Original strand, 53703813 - 53703877
Alignment:
Q  214 agatacatcatttactcaatgaatcaaaaaagttaacttttttcttataagtaggatcggaggga 278  Q
    |||||||||| |||| ||||||| | |||| || ||||||||||||||||  |||| ||||||||    
T  53703813 agatacatcacttacacaatgaacctaaaaggtcaacttttttcttataataaggaccggaggga 53703877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 1e-38; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 158 - 263
Target Start/End: Original strand, 11030219 - 11030323
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||    
T  11030219 catttgacttttttgattcattacataaatgatgtatttggtctatattctatatcagatacatcaattactcaatgaatctaaaaagttaa-ttttttc 11030317  T
Q  258 ttataa 263  Q
    ||||||    
T  11030318 ttataa 11030323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 158 - 278
Target Start/End: Original strand, 41153138 - 41153257
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    |||||||||||||||||||||| ||||| ||||||||||| |||||||| || | || |||||||| |||||||||||||| ||||||| ||| ||||||    
T  41153138 catttgacttttttgattcattgcataaatgatgtatttggtctatattataaaccaaatacatcaattactcaatgaatctaaaaagtcaac-tttttc 41153236  T
Q  258 ttataagtaggatcggaggga 278  Q
    |||||| ||||||||||||||    
T  41153237 ttataaataggatcggaggga 41153257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 158 - 263
Target Start/End: Original strand, 11182192 - 11182297
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    |||||||||||||||||||||| ||||| |||||||||||||  ||||||||||||| |||||||| ||||||||| |||  |||||||||| ||||||     
T  11182192 catttgacttttttgattcattccataaatgatgtatttgattcatattctatatcatatacatcaattactcaataaatttaaaaagttaatttttttt 11182291  T
Q  258 ttataa 263  Q
    ||||||    
T  11182292 ttataa 11182297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 38554485 - 38554601
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    ||||||||| |||||||||||||||||| | ||||||||| ||||||||||||| ||  ||||| | |||||||||||||  ||||||||||| ||||||    
T  38554485 catttgactattttgattcattacataaataatgtatttggtctatattctataccaagtacattaattactcaatgaatttaaaaagttaac-tttttc 38554583  T
Q  258 ttataagtaggatcggag 275  Q
    |||||| ||||| |||||    
T  38554584 ttataaataggaccggag 38554601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 159 - 278
Target Start/End: Original strand, 7943467 - 7943586
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttct 258  Q
    ||||||||||||| ||||||| ||||| |||| |||||| |||||||| || |  |||||||||| ||| |||||||||| ||||||| || ||||||||    
T  7943467 atttgactttttttattcattgcataaatgatatatttggtctatattgtagacaagatacatcaattattcaatgaatctaaaaagtcaatttttttct 7943566  T
Q  259 tataagtaggatcggaggga 278  Q
    ||||| ||||| ||||||||    
T  7943567 tataaataggaccggaggga 7943586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 159 - 278
Target Start/End: Complemental strand, 12873843 - 12873725
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttct 258  Q
    |||||||||| |||||||||| ||||| ||||||||||  ||||||||||||| || |||||| | ||||| |||||||| ||||||| ||| |||||||    
T  12873843 atttgactttattgattcattgcataaatgatgtatttagtctatattctataccaaatacattaattacttaatgaatctaaaaagtcaac-tttttct 12873745  T
Q  259 tataagtaggatcggaggga 278  Q
    |||||  |||||||||||||    
T  12873744 tataaaaaggatcggaggga 12873725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 158 - 255
Target Start/End: Complemental strand, 12962826 - 12962729
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttt 255  Q
    |||||||||||||||||||||| ||||| ||||||||||| |||||||| |||| ||  ||||| | |||||||||||||| ||||||| ||||||||    
T  12962826 catttgacttttttgattcattgcataaatgatgtatttggtctatattttataccaagtacattaattactcaatgaatctaaaaagtcaacttttt 12962729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 158 - 269
Target Start/End: Original strand, 4410804 - 4410915
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    ||||| || ||||||||| ||| ||||| |||||||||||||||||||| || |  |||||||| | |||| ||||||||| ||||||| ||||||||||    
T  4410804 catttaacctttttgatttattgcataaatgatgtatttgatctatattttaaacaagatacattaattacacaatgaatctaaaaagtcaacttttttc 4410903  T
Q  258 ttataagtagga 269  Q
    |||||| |||||    
T  4410904 ttataaatagga 4410915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 269
Target Start/End: Original strand, 38983027 - 38983136
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttct 258  Q
    ||||||||||||||||||||| ||||| ||||||||||  ||||||||||| |  |||||||||| |||| ||||||||| ||||| | ||||||||| |    
T  38983027 atttgacttttttgattcattgcataaatgatgtattttgtctatattctagacaagatacatcaattacacaatgaatctaaaaaatcaactttttt-t 38983125  T
Q  259 tataagtagga 269  Q
    ||||| |||||    
T  38983126 tataaatagga 38983136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 158 - 246
Target Start/End: Original strand, 9152406 - 9152494
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagt 246  Q
    |||||||||||||||| |||||| |||| ||||||||||| |||||||| || |  |||||||||| |||||||||||||| |||||||    
T  9152406 catttgacttttttgagtcattaaataattgatgtatttggtctatattttagactagatacatcaattactcaatgaatctaaaaagt 9152494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 32457241 - 32457337
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttt 255  Q
    ||||||||||||||||||||| ||||| ||||||||||  ||||||||||| |  |||||||||| ||||| |||||||| ||||||| || |||||    
T  32457241 atttgacttttttgattcattgcataaatgatgtatttagtctatattctagacaagatacatcaattacttaatgaatctaaaaagtcaaattttt 32457337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 164 - 278
Target Start/End: Original strand, 22333558 - 22333671
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    |||||||||||||||| ||||| | |||||||||||||||||| |||||||  || || | |||||||||||||| ||||||| || |||||||| ||||    
T  22333558 acttttttgattcattgcataaataatgtatttgatctatattatatatcaagtatattaattactcaatgaatctaaaaagtcaa-ttttttctaataa 22333656  T
Q  264 gtaggatcggaggga 278  Q
     ||||| | ||||||    
T  22333657 ctaggaccagaggga 22333671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 20555378 - 20555263
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    ||||| |||||||| ||||||||||||| | ||||||||| ||||||||||| |  |||||||||| ||| |||||| ||| ||||| |||| |||||||    
T  20555378 catttaactttttt-attcattacataaataatgtatttggtctatattctagacaagatacatcaattattcaatgtatctaaaaaattaa-ttttttc 20555281  T
Q  258 ttataagtaggatcggag 275  Q
    |||||| ||||| |||||    
T  20555280 ttataaataggaccggag 20555263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 275
Target Start/End: Complemental strand, 5109483 - 5109368
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttct 258  Q
    |||||||||||||||||||    |||| | ||||||||   |||||||||||| || |||||| | |||||||||||||| |||||||||||| ||||||    
T  5109483 atttgacttttttgattcaaagtataaattatgtatttagcctatattctataccaaatacattaattactcaatgaatctaaaaagttaact-ttttct 5109385  T
Q  259 tataagtaggatcggag 275  Q
    ||||| ||||| |||||    
T  5109384 tataaataggaccggag 5109368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 159 - 274
Target Start/End: Original strand, 5281206 - 5281319
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttct 258  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||| |||| || |||||| | ||||  ||| |||  ||||||| ||| |||||||    
T  5281206 atttgacttttttgattcattgcataaatgatgtatttgatctatattttataccaaatacattaattacaaaat-aatataaaaagtcaac-tttttct 5281303  T
Q  259 tataagtaggatcgga 274  Q
    ||||| || |||||||    
T  5281304 tataaatatgatcgga 5281319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 29989013 - 29988962
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattcta 209  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  29989013 catttgacttttttgattcattgcataaatgatgtatttgatctatattcta 29988962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 28248961 - 28249057
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttt 255  Q
    ||||||||||||||||| ||| ||||| | ||||||||  ||||||||||||| || |||||| | ||| | |||||||| ||||||| ||||||||    
T  28248961 atttgacttttttgattaattgcataaataatgtatttagtctatattctataccaaatacattaattatttaatgaatctaaaaagtcaacttttt 28249057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 165 - 237
Target Start/End: Original strand, 35728499 - 35728571
Alignment:
Q  165 cttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaat 237  Q
    ||||||||||||||| ||||| |||| |||||| ||||||||||| |  |||||||||| ||| |||||||||    
T  35728499 cttttttgattcattgcataaatgatatatttggtctatattctaaacaagatacatcaattattcaatgaat 35728571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 164 - 276
Target Start/End: Complemental strand, 45034512 - 45034402
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    ||||||||||||||||  |||  ||||||||||| ||||| |||||  | || ||||||| ||| | |||||||| |||||||||||| |||||||||||    
T  45034512 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggttaggtacatcaattattgaatgaatctaaaaagttaact-ttttcttataa 45034415  T
Q  264 gtaggatcggagg 276  Q
     ||||| ||||||    
T  45034414 ataggaccggagg 45034402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 10205046 - 10204959
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagt 246  Q
    |||||||| ||||||||||||  |||| ||||||||||  |||||||| || |  |||||||||| || ||||||||||| |||||||    
T  10205046 atttgactcttttgattcattgtataaatgatgtatttagtctatattttagacaagatacatcaattgctcaatgaatctaaaaagt 10204959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 244
Target Start/End: Complemental strand, 39118132 - 39118049
Alignment:
Q  161 ttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaa 244  Q
    ||||||||||||||| |||  |||| | ||||||||| ||||||||||| || ||||| |||| |||||||||| ||| |||||    
T  39118132 ttgacttttttgatttattgtataaattatgtatttggtctatattctagataagatatatcaattactcaatggatctaaaaa 39118049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 244
Target Start/End: Original strand, 3837437 - 3837523
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaa 244  Q
    ||||||| |||||||||||||| ||||| | ||||||||| |||||||| || |  ||||| |||| |||||||||| ||| |||||    
T  3837437 catttgatttttttgattcattgcataaataatgtatttggtctatattttaaacaagatagatcaattactcaatgcatcgaaaaa 3837523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 269
Target Start/End: Original strand, 30758748 - 30758856
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttct 258  Q
    ||||||||||||| ||||||| ||||| || |||||||| |||||| | || |  |||||||||| ||||||||| |||| ||||||| ||  |||||||    
T  30758748 atttgactttttttattcattgcataaatggtgtatttggtctatactttagacaagatacatcaattactcaat-aatctaaaaagtcaa-atttttct 30758845  T
Q  259 tataagtagga 269  Q
    ||||| |||||    
T  30758846 tataaatagga 30758856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 255
Target Start/End: Complemental strand, 39445113 - 39445019
Alignment:
Q  161 ttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttt 255  Q
    ||||||||||| ||| ||| ||||| || ||||||| |||||||||||| |  | |||||||| ||||||||||||||  |||||| || |||||    
T  39445113 ttgacttttttaatttattgcataaatggtgtatttaatctatattctagacaaaatacatcaattactcaatgaatcttaaaagtcaaattttt 39445019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 278
Target Start/End: Complemental strand, 36881648 - 36881535
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    |||||||||||||||||||||||||||| | ||| ||||| |||||||      | |||||||| | |||||||||| ||| ||||||| ||  ||||||    
T  36881648 catttgacttttttgattcattacataaataatgaatttggtctatat------taagatacattaattactcaatgtatctaaaaagtcaa-atttttc 36881556  T
Q  258 ttataagtaggatcggaggga 278  Q
    |||||| ||| | ||||||||    
T  36881555 ttataaatagaaccggaggga 36881535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 238
Target Start/End: Complemental strand, 2936414 - 2936334
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatc 238  Q
    ||||||||||||||||||||||  |||  |||| |||||  ||||||||||||| ||  ||||| | ||||||||||||||    
T  2936414 catttgacttttttgattcattggatagatgatatatttagtctatattctataccaagtacattaattactcaatgaatc 2936334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 278
Target Start/End: Complemental strand, 11794570 - 11794452
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    ||||| || |||||| |||||  ||||| |||||||||||||||| |||||||| ||  ||||| | ||| ||||| |||| ||||| | || |||||||    
T  11794570 cattttacatttttgtttcatggcataaatgatgtatttgatctacattctataccaagtacattaattattcaataaatctaaaaaatcaa-ttttttc 11794472  T
Q  258 ttataagtaggatcggaggga 278  Q
    |||||| |||| |||||||||    
T  11794471 ttataaatagg-tcggaggga 11794452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 278
Target Start/End: Original strand, 42698147 - 42698210
Alignment:
Q  214 agatacatcatttactcaatgaatcaaaaaagttaacttttttcttataagtaggatcggaggga 278  Q
    |||||||||| |||||||||||||| ||||||| || |||||| |||||| || |||||||||||    
T  42698147 agatacatcaattactcaatgaatctaaaaagtcaaatttttt-ttataaatatgatcggaggga 42698210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 276
Target Start/End: Complemental strand, 45571144 - 45571034
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    ||||||||||||||||  |||  ||||||||||| ||||| |||||    || ||||||| ||| | |||||||| |||||||||| |||||||||||||    
T  45571144 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaagttaa-ttttttcttataa 45571047  T
Q  264 gtaggatcggagg 276  Q
     ||||| ||||||    
T  45571046 ataggaccggagg 45571034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 276
Target Start/End: Complemental strand, 45574811 - 45574701
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    ||||||||||||||||  |||  ||||||||||| ||||| |||||    || ||||||| ||| | |||||||| |||||||||| |||||||||||||    
T  45574811 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaagttaa-ttttttcttataa 45574714  T
Q  264 gtaggatcggagg 276  Q
     ||||| ||||||    
T  45574713 ataggaccggagg 45574701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 276
Target Start/End: Complemental strand, 45578478 - 45578368
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    ||||||||||||||||  |||  ||||||||||| ||||| |||||    || ||||||| ||| | |||||||| |||||||||| |||||||||||||    
T  45578478 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaagttaa-ttttttcttataa 45578381  T
Q  264 gtaggatcggagg 276  Q
     ||||| ||||||    
T  45578380 ataggaccggagg 45578368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 276
Target Start/End: Complemental strand, 45582145 - 45582035
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    ||||||||||||||||  |||  ||||||||||| ||||| |||||    || ||||||| ||| | |||||||| |||||||||| |||||||||||||    
T  45582145 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaagttaa-ttttttcttataa 45582048  T
Q  264 gtaggatcggagg 276  Q
     ||||| ||||||    
T  45582047 ataggaccggagg 45582035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 276
Target Start/End: Complemental strand, 45585812 - 45585702
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    ||||||||||||||||  |||  ||||||||||| ||||| |||||    || ||||||| ||| | |||||||| |||||||||| |||||||||||||    
T  45585812 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaagttaa-ttttttcttataa 45585715  T
Q  264 gtaggatcggagg 276  Q
     ||||| ||||||    
T  45585714 ataggaccggagg 45585702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 276
Target Start/End: Complemental strand, 45589479 - 45589369
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    ||||||||||||||||  |||  ||||||||||| ||||| |||||    || ||||||| ||| | |||||||| |||||||||| |||||||||||||    
T  45589479 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaagttaa-ttttttcttataa 45589382  T
Q  264 gtaggatcggagg 276  Q
     ||||| ||||||    
T  45589381 ataggaccggagg 45589369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 276
Target Start/End: Complemental strand, 45593146 - 45593036
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    ||||||||||||||||  |||  ||||||||||| ||||| |||||    || ||||||| ||| | |||||||| |||||||||| |||||||||||||    
T  45593146 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaagttaa-ttttttcttataa 45593049  T
Q  264 gtaggatcggagg 276  Q
     ||||| ||||||    
T  45593048 ataggaccggagg 45593036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 276
Target Start/End: Complemental strand, 45596813 - 45596703
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    ||||||||||||||||  |||  ||||||||||| ||||| |||||    || ||||||| ||| | |||||||| |||||||||| |||||||||||||    
T  45596813 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaagttaa-ttttttcttataa 45596716  T
Q  264 gtaggatcggagg 276  Q
     ||||| ||||||    
T  45596715 ataggaccggagg 45596703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 276
Target Start/End: Complemental strand, 45600480 - 45600370
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    ||||||||||||||||  |||  ||||||||||| ||||| |||||    || ||||||| ||| | |||||||| |||||||||| |||||||||||||    
T  45600480 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaagttaa-ttttttcttataa 45600383  T
Q  264 gtaggatcggagg 276  Q
     ||||| ||||||    
T  45600382 ataggaccggagg 45600370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 276
Target Start/End: Complemental strand, 45604147 - 45604037
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    ||||||||||||||||  |||  ||||||||||| ||||| |||||    || ||||||| ||| | |||||||| |||||||||| |||||||||||||    
T  45604147 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaagttaa-ttttttcttataa 45604050  T
Q  264 gtaggatcggagg 276  Q
     ||||| ||||||    
T  45604049 ataggaccggagg 45604037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 276
Target Start/End: Complemental strand, 45607814 - 45607704
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    ||||||||||||||||  |||  ||||||||||| ||||| |||||    || ||||||| ||| | |||||||| |||||||||| |||||||||||||    
T  45607814 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaagttaa-ttttttcttataa 45607717  T
Q  264 gtaggatcggagg 276  Q
     ||||| ||||||    
T  45607716 ataggaccggagg 45607704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 276
Target Start/End: Complemental strand, 45611481 - 45611371
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    ||||||||||||||||  |||  ||||||||||| ||||| |||||    || ||||||| ||| | |||||||| |||||||||| |||||||||||||    
T  45611481 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaagttaa-ttttttcttataa 45611384  T
Q  264 gtaggatcggagg 276  Q
     ||||| ||||||    
T  45611383 ataggaccggagg 45611371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 276
Target Start/End: Complemental strand, 45615148 - 45615038
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    ||||||||||||||||  |||  ||||||||||| ||||| |||||    || ||||||| ||| | |||||||| |||||||||| |||||||||||||    
T  45615148 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaagttaa-ttttttcttataa 45615051  T
Q  264 gtaggatcggagg 276  Q
     ||||| ||||||    
T  45615050 ataggaccggagg 45615038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 7833372 - 7833317
Alignment:
Q  189 atgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaa 244  Q
    |||||| ||||||||||| || ||||||||||||| ||| |||||||||| |||||    
T  7833372 atgtatctgatctatattttaaatcagatacatcaattattcaatgaatctaaaaa 7833317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 28494825 - 28494774
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattcta 209  Q
    ||||||| |||||||||||||| ||||| |||| |||||| |||||||||||    
T  28494825 catttgatttttttgattcattgcataaatgatatatttggtctatattcta 28494774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 276
Target Start/End: Complemental strand, 30761499 - 30761382
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    |||||||||||||||||||||| || ||   ||||||||  ||||||||||| |  ||||| || | |||||||||||||  ||||||| ||  | ||||    
T  30761499 catttgacttttttgattcattgcacaaaatatgtatttagtctatattctagacaagataaattaattactcaatgaatgtaaaaagtcaa-atgtttc 30761401  T
Q  258 ttataagtaggatcggagg 276  Q
    |||||| ||||| ||||||    
T  30761400 ttataaataggaccggagg 30761382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 205
Target Start/End: Complemental strand, 32487110 - 32487064
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatat 205  Q
    ||||||||||||||||||||| ||||| | ||||||||| |||||||    
T  32487110 atttgacttttttgattcattgcataaataatgtatttggtctatat 32487064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 246
Target Start/End: Complemental strand, 41153229 - 41153144
Alignment:
Q  161 ttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagt 246  Q
    |||||||||| ||||||||   ||| ||||||||||| | |||| | || | || ||||||||||||  |||||||||||||||||    
T  41153229 ttgactttttagattcattgagtaattgatgtatttggtttataatatagaccaaatacatcatttatgcaatgaatcaaaaaagt 41153144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 12486110 - 12486062
Alignment:
Q  161 ttgacttttttgattcattacataagtgatgtatttgatctatattcta 209  Q
    |||||||||| ||||||||  |||| ||||||||||| |||||||||||    
T  12486110 ttgactttttagattcattgaataattgatgtatttggtctatattcta 12486062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 255
Target Start/End: Complemental strand, 33824470 - 33824374
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttt 255  Q
    ||||||||||| |||||||||  |||| |||| ||||| || |||||| || |  ||||| |||| |||||||||||||  ||||||| || |||||    
T  33824470 atttgacttttctgattcattgtataaatgatatatttaatatatattttagacaagatatatcaattactcaatgaatttaaaaagtcaaattttt 33824374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 1e-32; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 158 - 285
Target Start/End: Original strand, 28677344 - 28677470
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    |||||||||||||||||||||| ||||| ||||||||||| ||||||||||| |  |||||||||| ||||||||| |||| ||||||| || |||||||    
T  28677344 catttgacttttttgattcattgcataaatgatgtatttggtctatattctagacaagatacatcaattactcaataaatctaaaaagtcaa-ttttttc 28677442  T
Q  258 ttataagtaggatcggagggaataatta 285  Q
    |||||| |||||||||||||| ||||||    
T  28677443 ttataaataggatcggagggagtaatta 28677470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 158 - 278
Target Start/End: Original strand, 36245403 - 36245522
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    |||||||||||||||||||||| ||||| ||||||||||| ||||||||||| |  |||||||||| |||||||||||||| ||||||| || |||||||    
T  36245403 catttgacttttttgattcattgcataaatgatgtatttggtctatattctagacaagatacatcaattactcaatgaatctaaaaagtcaa-ttttttc 36245501  T
Q  258 ttataagtaggatcggaggga 278  Q
    |||||| |||||  |||||||    
T  36245502 ttataaataggacaggaggga 36245522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 158 - 262
Target Start/End: Original strand, 29365648 - 29365751
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    |||||||||||||| || |||| ||||| ||||||||||||||||||||||||| || |||||| | |||||||||||||| ||||||| || |||||||    
T  29365648 catttgacttttttaatacattgcataaatgatgtatttgatctatattctataccaaatacattaattactcaatgaatctaaaaagtcaa-ttttttc 29365746  T
Q  258 ttata 262  Q
    |||||    
T  29365747 ttata 29365751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 6838496 - 6838411
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaa 243  Q
    |||||||||||||||||||||| ||||| ||||||||||| ||||||||||| |  |||||||| | |||||||||||||||||||    
T  6838496 catttgacttttttgattcattgcataaatgatgtatttggtctatattctagacaagatacattaattactcaatgaatcaaaaa 6838411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 278
Target Start/End: Original strand, 2523797 - 2523916
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    |||||||||||||||||||||| |||||  ||||||| || ||||||||||||  ||  ||||| | |||||||||||||| ||||||| ||| ||||||    
T  2523797 catttgacttttttgattcattgcataaacgatgtatctggtctatattctatgccaagtacattaattactcaatgaatctaaaaagtcaac-tttttc 2523895  T
Q  258 ttataagtaggatcggaggga 278  Q
    |||||| ||||| ||||||||    
T  2523896 ttataaataggaccggaggga 2523916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 158 - 269
Target Start/End: Original strand, 8566108 - 8566218
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    ||||| |||||||||||||||| ||||| ||||||||||| ||||||||||| |  |||||||||| |||||||||||||| ||||| | ||  ||||||    
T  8566108 catttaacttttttgattcattgcataaatgatgtatttggtctatattctagacaagatacatcaattactcaatgaatctaaaaaatcaa-atttttc 8566206  T
Q  258 ttataagtagga 269  Q
    |||||| |||||    
T  8566207 ttataaatagga 8566218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 158 - 269
Target Start/End: Original strand, 11668042 - 11668152
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    |||||||||||||||||||||| ||||| |||| |||||||||||||||||| |  |||||||||| ||| |||||||||  ||||||| ||  ||||||    
T  11668042 catttgacttttttgattcattgcataaatgatatatttgatctatattctagacaagatacatcaattaatcaatgaatgtaaaaagtcaa-atttttc 11668140  T
Q  258 ttataagtagga 269  Q
    |||||| |||||    
T  11668141 ttataaatagga 11668152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 158 - 278
Target Start/End: Complemental strand, 13807359 - 13807244
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||||| |  ||    |||| |||||||||||||| ||||||| ||| ||||||    
T  13807359 catttgacttttttgattcattacataaatgatatatttgatctatattctaaagaag----atcaattactcaatgaatctaaaaagtcaac-tttttc 13807265  T
Q  258 ttataagtaggatcggaggga 278  Q
    |||||| || || ||||||||    
T  13807264 ttataaataagaccggaggga 13807244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 255
Target Start/End: Complemental strand, 41850717 - 41850620
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttt 255  Q
    ||||| |||||||||||||||| ||||| ||||||||||| |||||||| |||| || |||||| | ||| |||||||||| ||||| ||||||||||    
T  41850717 cattttacttttttgattcattgcataaatgatgtatttgctctatattttataccaaatacattaattattcaatgaatctaaaaaattaacttttt 41850620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 158 - 256
Target Start/End: Original strand, 39153314 - 39153412
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaactttttt 256  Q
    |||||||||||||||||||||| ||||| ||||||||||  |||||||| || | || |||||||| |||||||||||| | ||||||| || ||||||    
T  39153314 catttgacttttttgattcattgcataaatgatgtatttagtctatattatagaccaaatacatcaattactcaatgaagctaaaaagtcaattttttt 39153412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 263
Target Start/End: Original strand, 32811738 - 32811840
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttct 258  Q
    ||||||||||||| ||| ||| ||||| ||||||||||| || |||||||||| || ||| |||| |||||||||||||| ||||| |||| ||||||||    
T  32811738 atttgactttttt-attaattccataaatgatgtatttggtccatattctataccatataaatcaattactcaatgaatctaaaaaattaa-ttttttct 32811835  T
Q  259 tataa 263  Q
    |||||    
T  32811836 tataa 32811840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 2680886 - 2680936
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattcta 209  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  2680886 atttgacttttttgattcattatataaatgatgtatttgatctatattcta 2680936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 244
Target Start/End: Complemental strand, 48838433 - 48838347
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaa 244  Q
    ||||| |||||||| ||||||||||||| ||||||||||| |||||||| |||| || |||||| | || ||||||||||| |||||    
T  48838433 catttaacttttttaattcattacataaatgatgtatttggtctatattttataccaaatacattaattgctcaatgaatctaaaaa 48838347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 166 - 283
Target Start/End: Original strand, 10007611 - 10007727
Alignment:
Q  166 ttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataagt 265  Q
    |||||| ||||||| ||||| | ||||||||| ||||||||||| |  |||||||| | |||  ||||||||| ||||||| ||| |||||||||||| |    
T  10007611 tttttttattcatttcataaattatgtatttggtctatattctacacaagatacattaattatacaatgaatctaaaaagtcaac-tttttcttataaat 10007709  T
Q  266 aggatcggagggaataat 283  Q
    |||| |||||||| ||||    
T  10007710 aggaccggagggagtaat 10007727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 161 - 278
Target Start/End: Complemental strand, 10462495 - 10462379
Alignment:
Q  161 ttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttctta 260  Q
    ||||| ||||| ||||||| ||||| ||||||||||| | |||||| || |  |||||||||| | |||||||||||| |||||| | || |||||||||    
T  10462495 ttgacattttttattcattgcataaatgatgtatttggtatatattttagacaagatacatcaatcactcaatgaatctaaaaag-tcacatttttctta 10462397  T
Q  261 taagtaggatcggaggga 278  Q
    ||| || |||||||||||    
T  10462396 taaataagatcggaggga 10462379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 164 - 285
Target Start/End: Original strand, 32811411 - 32811530
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    ||||||||||||||||  |||| ||||||||||| ||||| |||||    || ||||||| ||||| |||||||| ||||| ||||| ||||||||||||    
T  32811411 acttttttgattcattgaataattgatgtatttggtctat-ttctaggctaggtacatcaattactgaatgaatctaaaaaattaac-tttttcttataa 32811508  T
Q  264 gtaggatcggagggaataatta 285  Q
     ||||| |||||||| ||||||    
T  32811509 ataggaccggagggagtaatta 32811530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 159 - 256
Target Start/End: Original strand, 45441464 - 45441561
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaactttttt 256  Q
    ||||||||||||||||| |||  |||  ||||||||||||||||||||||| |  ||||||| || ||| ||| |||||| |||||||||| ||||||    
T  45441464 atttgacttttttgatttattgtatagatgatgtatttgatctatattctagacaagatacaccaattattcattgaatctaaaaagttaattttttt 45441561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 278
Target Start/End: Complemental strand, 24163390 - 24163270
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    ||||| |||||||| ||||||| ||||| |||||||| || |||||||||||    |||||||| | |||  ||||||||| ||||||| || |||||||    
T  24163390 catttcacttttttaattcattgcataaatgatgtatatggtctatattctacgcaagatacattaattatacaatgaatctaaaaagtaaatttttttc 24163291  T
Q  258 ttataagtaggatcggaggga 278  Q
     ||||| ||||| ||||||||    
T  24163290 ctataaataggaccggaggga 24163270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 246
Target Start/End: Original strand, 30869213 - 30869301
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagt 246  Q
    |||||||| ||||||||| |||  |||| | ||||||||| ||||||||||| |  |||||||||| |||||||||||||| |||||||    
T  30869213 catttgacgtttttgatttattgtataaataatgtatttggtctatattctagacaagatacatcaattactcaatgaatctaaaaagt 30869301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 266
Target Start/End: Complemental strand, 45533351 - 45533244
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    |||||||||||||| |||||||  |||| | ||||||||| ||||||||||| |  |||||||| | ||||  |||||||| ||||||| || |||||||    
T  45533351 catttgacttttttaattcattgtataaataatgtatttggtctatattctagacaagatacattaattacataatgaatctaaaaagtcaa-ttttttc 45533253  T
Q  258 ttataagta 266  Q
    |||||||||    
T  45533252 ttataagta 45533244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 255
Target Start/End: Complemental strand, 48082918 - 48082823
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttt 255  Q
    ||||||||||||| ||||||||||||| || |||||||| ||||||||||| |   ||||||| | |||| ||||||||| ||||||| ||||||||    
T  48082918 atttgactttttttattcattacataaatggtgtatttg-tctatattctacacatgatacattaattacacaatgaatctaaaaagtcaacttttt 48082823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 158 - 284
Target Start/End: Original strand, 40142800 - 40142925
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    |||||||||||||||||||||| ||||| | ||||||||| ||||||| ||| |  |||||||| | |||  |||| |||| ||||| | || |||||||    
T  40142800 catttgacttttttgattcattgcataaataatgtatttggtctatatcctaaacaagatacattaattatacaataaatctaaaaaatcaa-ttttttc 40142898  T
Q  258 ttataagtaggatcggagggaataatt 284  Q
    |||||  ||||| |||||||| |||||    
T  40142899 ttatacataggaccggagggagtaatt 40142925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 158 - 246
Target Start/End: Original strand, 2399979 - 2400067
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagt 246  Q
    ||||||||||||||||||||||  |||| |||||||||| ||||||||| || |  |||||||||| ||| |||| ||| | |||||||    
T  2399979 catttgacttttttgattcattgtataaatgatgtatttaatctatattttagactagatacatcaattattcaacgaacctaaaaagt 2400067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 237
Target Start/End: Complemental strand, 2610300 - 2610229
Alignment:
Q  166 ttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaat 237  Q
    |||||| ||||||| ||||| ||||||||||  ||||||||||| | || |||||||| |||||||||||||    
T  2610300 ttttttaattcattgcataaatgatgtatttagtctatattctagaccaaatacatcaattactcaatgaat 2610229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 246
Target Start/End: Complemental strand, 30823821 - 30823742
Alignment:
Q  167 tttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagt 246  Q
    ||||| |||||||| |||| | ||||||||| ||||||||||||| || |||||| | || ||||||||||| |||||||    
T  30823821 ttttttattcattatataaataatgtatttggtctatattctataccaaatacattaatttctcaatgaatctaaaaagt 30823742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 255
Target Start/End: Original strand, 34117981 - 34118063
Alignment:
Q  173 attcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttt 255  Q
    ||||||| ||||| ||||||||||| ||||||||||| |  |||||||| | |||| ||||||||  ||||||| ||||||||    
T  34117981 attcattgcataaatgatgtatttggtctatattctagacaagatacattaattacacaatgaatttaaaaagtcaacttttt 34118063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 278
Target Start/End: Original strand, 43174363 - 43174425
Alignment:
Q  216 atacatcatttactcaatgaatcaaaaaagttaacttttttcttataagtaggatcggaggga 278  Q
    |||||||||||||  ||||||| |||||||| || |||||| |||||| ||||||||||||||    
T  43174363 atacatcatttacgaaatgaattaaaaaagtaaattttttttttataaataggatcggaggga 43174425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 275
Target Start/End: Complemental strand, 44682679 - 44682571
Alignment:
Q  166 ttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataagt 265  Q
    |||||||||||||| ||||| |||| |||||| |||||| |||| |  | |||||||| ||||| ||||||||  |||||| ||  |||||||||||| |    
T  44682679 ttttttgattcattgcataaatgatatatttggtctataatctagacaaaatacatcagttacttaatgaatctcaaaagtcaa-atttttcttataaat 44682581  T
Q  266 aggatcggag 275  Q
    |||| |||||    
T  44682580 aggaccggag 44682571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 283
Target Start/End: Original strand, 9979829 - 9979951
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttct 258  Q
    |||||||| |||||||| ||| ||||| ||||||||||  || |||||||| |  |||||||| | ||||||||| |||| ||||||| || |||| |||    
T  9979829 atttgactattttgatttatt-cataaatgatgtatttagtcaatattctagacaagatacatgaattactcaataaatctaaaaagtcaaatttt-tct 9979926  T
Q  259 tataagtaggatcggagggaataat 283  Q
    ||||| || | ||||||||| ||||    
T  9979927 tataaataagttcggagggagtaat 9979951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 276
Target Start/End: Original strand, 27231867 - 27231977
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    ||||||||||||||||  |||  ||||||||||| ||||| |||||    || ||||||| ||| | |||||||| ||||||||||| ||||||||||||    
T  27231867 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaagttaac-tttttcttataa 27231964  T
Q  264 gtaggatcggagg 276  Q
     ||||| ||||||    
T  27231965 ataggaccggagg 27231977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 28298975 - 28298924
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattcta 209  Q
    |||||||||||||||||||||| ||||| |  | ||||||||||||||||||    
T  28298975 catttgacttttttgattcattgcataaatagtatatttgatctatattcta 28298924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 278
Target Start/End: Complemental strand, 32811441 - 32811380
Alignment:
Q  216 atacatcatttactcaatgaatcaaaaaagttaacttttttcttataagtaggatcggaggga 278  Q
    |||||||| ||| ||||||||||||||||| ||| || |||||||||  ||||||||||||||    
T  32811441 atacatcaattattcaatgaatcaaaaaag-taaattgtttcttatatataggatcggaggga 32811380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 256
Target Start/End: Original strand, 40176063 - 40176161
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaactttttt 256  Q
    ||||| |||||||| ||||||| | ||| ||||||||||| ||||||||||| | ||  ||||| | || || |||||||| ||||||| || ||||||    
T  40176063 catttcactttttttattcattgcttaaatgatgtatttggtctatattctaaaccaagtacattaatttcttaatgaatctaaaaagtcaattttttt 40176161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 281
Target Start/End: Complemental strand, 45123360 - 45123244
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctat-atcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttata 262  Q
    ||||||||||||||||  ||||||||||||| | ||||||||| ||| || |||||||| | ||| || ||||||  ||||||| ||||||||| |||||    
T  45123360 acttttttgattcattgtataagtgatgtatctaatctatatt-tataataagatacattaattattctatgaatttaaaaagtcaactttttt-ttata 45123263  T
Q  263 agtaggatcggagggaata 281  Q
       |||| |||||||||||    
T  45123262 gtaaggaccggagggaata 45123244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 1e-29; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 158 - 256
Target Start/End: Original strand, 38590093 - 38590191
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaactttttt 256  Q
    |||||||||||||||||||||| ||||| | ||||||||| ||||||||||||| ||||||||||| |||||||||||||| |||||||||| ||||||    
T  38590093 catttgacttttttgattcatttcataaataatgtatttggtctatattctataccagatacatcaattactcaatgaatctaaaaagttaattttttt 38590191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 158 - 274
Target Start/End: Original strand, 519860 - 519975
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    |||||||||||||||||| |||  |||| ||||||||||||||||||||||| || |||||||||| |||||||||||||| ||||||||||   |||||    
T  519860 catttgacttttttgatttattgtataaatgatgtatttgatctatattctagataagatacatcaattactcaatgaatctaaaaagttaa-aattttc 519958  T
Q  258 ttataagtaggatcgga 274  Q
    |||||| ||||||||||    
T  519959 ttataaataggatcgga 519975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 158 - 276
Target Start/End: Original strand, 38040303 - 38040420
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    |||||||||||||||||||||| ||||| |||| |||||||||||||||||| |  |||||||||| ||| |||||||||| ||||||| ||  ||||||    
T  38040303 catttgacttttttgattcattgcataaatgatatatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtcaa-atttttc 38040401  T
Q  258 ttataagtaggatcggagg 276  Q
    |||||| ||||| ||||||    
T  38040402 ttataaataggaccggagg 38040420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 269
Target Start/End: Original strand, 38737958 - 38738068
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    |||||||||||||||||||||| |||||  |||||||||| | ||||||||| |  |||||||||| |||||||||||||| ||||||||||  ||||||    
T  38737958 catttgacttttttgattcattgcataaaggatgtatttggtttatattctagacaagatacatcaattactcaatgaatctaaaaagttaa-atttttc 38738056  T
Q  258 ttataagtagga 269  Q
    |||||| |||||    
T  38738057 ttataaatagga 38738068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 158 - 271
Target Start/End: Original strand, 34146832 - 34146943
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    ||||| ||||||||||||||||||| || ||||||||||||| ||||||||| |||| |||||| | ||| |||||||||||||||| | || |||||||    
T  34146832 catttaacttttttgattcattacaaaa-tgatgtatttgatatatattctagatcaaatacattaattattcaatgaatcaaaaaaatcaa-ttttttc 34146929  T
Q  258 ttataagtaggatc 271  Q
    |||||| |||||||    
T  34146930 ttataaataggatc 34146943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 246
Target Start/End: Complemental strand, 26070945 - 26070857
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagt 246  Q
    ||||| |||||||||||||||| ||||| | ||||||||| ||||||||||| || |||||||||| |||||||||||||| |||||||    
T  26070945 cattttacttttttgattcattgcataaataatgtatttggtctatattctagataagatacatcaattactcaatgaatctaaaaagt 26070857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 278
Target Start/End: Complemental strand, 26924334 - 26924215
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    ||||||||||||||||||||||  |||| ||||||||||| ||||||||||||| ||  ||||| | | |||||||||||  ||||||| ||| ||||||    
T  26924334 catttgacttttttgattcattgaataaatgatgtatttggtctatattctataccaagtacattaatgactcaatgaatttaaaaagtcaac-tttttc 26924236  T
Q  258 ttataagtaggatcggaggga 278  Q
    |||||| ||||| ||||||||    
T  26924235 ttataaataggaccggaggga 26924215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 49944954 - 49944839
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    ||||||| ||||||||||||||  |||| ||||||||||| ||||||||||| |  |||||||||| ||| |||||||||| ||||||||||  ||||||    
T  49944954 catttgatttttttgattcattgtataaatgatgtatttggtctatattctagacaagatacatcaattattcaatgaatctaaaaagttaa-atttttc 49944856  T
Q  258 ttataagtaggatcgga 274  Q
    |||||| ||||| ||||    
T  49944855 ttataaataggaccgga 49944839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 158 - 244
Target Start/End: Original strand, 44939093 - 44939179
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaa 244  Q
    |||||||||||||| |||||||  |||| ||||||||||| ||||||||||| || |||||||||| |||||||||||||| |||||    
T  44939093 catttgactttttttattcattgtataaatgatgtatttggtctatattctagattagatacatcaattactcaatgaatctaaaaa 44939179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 166 - 276
Target Start/End: Original strand, 50155333 - 50155442
Alignment:
Q  166 ttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataagt 265  Q
    |||||| ||||||| ||||| ||||||||||| |||||||| || | || |||||||| |||||||||||||| ||||||| ||| |||||||||||| |    
T  50155333 ttttttaattcattgcataaatgatgtatttggtctatattatagaccaaatacatcaattactcaatgaatctaaaaagtcaac-tttttcttataaat 50155431  T
Q  266 aggatcggagg 276  Q
    |||| ||||||    
T  50155432 aggaccggagg 50155442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 159 - 263
Target Start/End: Complemental strand, 8971348 - 8971245
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttct 258  Q
    ||||||||||||||||||||| ||||| | | || ||||||||||||||||| ||| |||||| | |||||||||||||| || || |||| ||||||||    
T  8971348 atttgacttttttgattcattgcataaataacgtgtttgatctatattctatgtcaaatacattaattactcaatgaatctaacaacttaa-ttttttct 8971250  T
Q  259 tataa 263  Q
    |||||    
T  8971249 tataa 8971245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 158 - 278
Target Start/End: Original strand, 26760200 - 26760319
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    ||||||||||||||||||||||  |||| ||||||||||| ||||||||||||| ||  ||||| | | |||||||||||  ||||| | || |||||||    
T  26760200 catttgacttttttgattcattgaataaatgatgtatttggtctatattctataccaagtacattaatgactcaatgaatttaaaaaatcaa-ttttttc 26760298  T
Q  258 ttataagtaggatcggaggga 278  Q
    |||||| ||||| ||||||||    
T  26760299 ttataaataggaccggaggga 26760319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 158 - 246
Target Start/End: Complemental strand, 34332597 - 34332509
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagt 246  Q
    ||||||||||||||||||||||  |||| ||||||||||| ||||||||||| |  | |||||||| |||||||||||||| |||||||    
T  34332597 catttgacttttttgattcattggataaatgatgtatttggtctatattctagacaaaatacatcaattactcaatgaatctaaaaagt 34332509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 158 - 244
Target Start/End: Complemental strand, 6661635 - 6661549
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaa 244  Q
    |||||||||||||||||| ||| ||||| ||||||||||| |||||||||||||  |||||||| | ||||| |||||||| |||||    
T  6661635 catttgacttttttgattaattgcataaatgatgtatttggtctatattctatacaagatacattaattactaaatgaatctaaaaa 6661549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 255
Target Start/End: Complemental strand, 15343057 - 15342961
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttt 255  Q
    |||||| |||||||||||||| ||||| ||||||||||| ||||||||||| |  |||||||| | |||| ||||||||| ||||| | ||||||||    
T  15343057 atttgatttttttgattcattgcataaatgatgtatttggtctatattctagacaagatacattaattacacaatgaatctaaaaattcaacttttt 15342961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 15286036 - 15286115
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaat 237  Q
    |||||||||||||| |||||||| |||| ||||||||||||||||||||||||| ||  ||||| | ||| |||||||||    
T  15286036 catttgacttttttaattcattatataaatgatgtatttgatctatattctataccaagtacattaattattcaatgaat 15286115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 166 - 285
Target Start/End: Original strand, 29256634 - 29256751
Alignment:
Q  166 ttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataagt 265  Q
    |||||||||||||| ||||| ||||||||||| ||| |||| |||| || | |||| | |||||||||||||| ||||||| ||| |||||||||||| |    
T  29256634 ttttttgattcattgcataaatgatgtatttggtct-tattttataccaaaaacattaattactcaatgaatctaaaaagtcaac-tttttcttataaat 29256731  T
Q  266 aggatcggagggaataatta 285  Q
    |||| |||||| | ||||||    
T  29256732 aggaccggaggaagtaatta 29256751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 158 - 263
Target Start/End: Complemental strand, 11386275 - 11386171
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    ||||||||||||| |||||||| ||||| ||||||||||  ||||||||||| | |||| |||||| ||| |||||||||| |||||  | | |||||||    
T  11386275 catttgacttttt-gattcattgcataaatgatgtatttcgtctatattctagaccagaaacatcaattattcaatgaatctaaaaaaatcaattttttc 11386177  T
Q  258 ttataa 263  Q
    ||||||    
T  11386176 ttataa 11386171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 248
Target Start/End: Complemental strand, 25554643 - 25554570
Alignment:
Q  175 tcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagtta 248  Q
    |||||| |||| |||||||||||  ||||| | ||||||| |||||||||||| |||||||||| |||||||||    
T  25554643 tcattaaataactgatgtatttggcctatagtatatatcacatacatcatttattcaatgaatctaaaaagtta 25554570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 161 - 249
Target Start/End: Complemental strand, 34146922 - 34146835
Alignment:
Q  161 ttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaa 249  Q
    |||| ||||||||||||||  |||| | |||||||||||||| | | ||||||| |||||||||||  | |||||||||||||||||||    
T  34146922 ttgatttttttgattcattgaataattaatgtatttgatctagaatatatatcaaatacatcattttgt-aatgaatcaaaaaagttaa 34146835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 164 - 276
Target Start/End: Original strand, 43929379 - 43929489
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    ||||||||||||||||| |||  ||||||||||| ||||| |||||    || ||||||| ||| | |||||||| ||||||||||| ||||||||||||    
T  43929379 acttttttgattcattaaatagttgatgtatttggtctat-ttctaagctaggtacatcaattattgaatgaatctaaaaagttaac-tttttcttataa 43929476  T
Q  264 gtaggatcggagg 276  Q
     ||||| ||||||    
T  43929477 ataggaccggagg 43929489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 244
Target Start/End: Complemental strand, 23923665 - 23923585
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaa 244  Q
    |||||| ||||||||| ||||| ||||| ||||| ||||||||||| |  | |||||| | |||||||||||||| |||||    
T  23923665 acttttctgattcattgcataaatgatgcatttggtctatattctagacaatatacattaattactcaatgaatctaaaaa 23923585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 276
Target Start/End: Complemental strand, 34662796 - 34662686
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    ||||||||||||||||  |||  ||||||||||| ||||| |||||    || ||||||| ||| | |||||||| ||||||||||||||||| ||||||    
T  34662796 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaagttaactttttt-ttataa 34662699  T
Q  264 gtaggatcggagg 276  Q
     ||| ||||||||    
T  34662698 atagaatcggagg 34662686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 276
Target Start/End: Original strand, 47678289 - 47678399
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    ||||||||||||||||  |||  ||||||||||||||||| |||||  | || ||||||| ||| | ||||||||  |||||||||  ||||||||||||    
T  47678289 acttttttgattcattgaatagttgatgtatttgatctat-ttctaggttaggtacatcaattattgaatgaatctcaaaagttaa-atttttcttataa 47678386  T
Q  264 gtaggatcggagg 276  Q
     ||||| ||||||    
T  47678387 ataggaccggagg 47678399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 9387259 - 9387298
Alignment:
Q  167 tttttgattcattacataagtgatgtatttgatctatatt 206  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  9387259 ttttttattcattacataaatgatgtatttgatctatatt 9387298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 2351195 - 2351130
Alignment:
Q  217 tacatcatttactcaatgaatcaaaaaagttaacttttttcttataagtaggatcggagggaataat 283  Q
    |||| ||||||  |||||||||||||||||||| | ||| ||||||| |||||||||||||| ||||    
T  2351195 tacaacatttatgcaatgaatcaaaaaagttaaatgttt-cttataaataggatcggagggagtaat 2351130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 278
Target Start/End: Original strand, 26924298 - 26924359
Alignment:
Q  216 atacatcatttactcaatgaatcaaaaaagttaacttttttcttataagtaggatcggaggga 278  Q
    |||||||||||| |||||||||||||||||| ||  | |||||||||| ||||| ||||||||    
T  26924298 atacatcatttattcaatgaatcaaaaaagtcaa-atgtttcttataaataggaccggaggga 26924359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 255
Target Start/End: Complemental strand, 6793715 - 6793618
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttt 255  Q
    ||||| |||||| ||||||||| ||||| |||||||||||| ||||| | ||||  |  ||||| | ||| |||||||||  ||||| ||||||||||    
T  6793715 catttaacttttatgattcattgcataaatgatgtatttgacctataatatatactaagtacattaattattcaatgaatttaaaaaattaacttttt 6793618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 281
Target Start/End: Complemental strand, 26760236 - 26760172
Alignment:
Q  216 atacatcatttactcaatgaatcaaaaaagttaacttttttcttataagtaggatcggagggaata 281  Q
    |||||||||||| |||||||||||||||||| ||  | |||||||||| ||||| | |||||||||    
T  26760236 atacatcatttattcaatgaatcaaaaaagtcaa-atgtttcttataaataggacccgagggaata 26760172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 27819339 - 27819436
Alignment:
Q  159 atttgacttttttgattcattacataagtgat-gtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttt 255  Q
    ||||||||||||||||||||| ||||| ||||  |||||||| |||||| || |  | ||||| ||  || |||||||||| |||||||||| |||||    
T  27819339 atttgacttttttgattcatttcataaatgatattatttgatttatattttagacaaaatacaccaaatattcaatgaatctaaaaagttaaattttt 27819436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 24305693 - 24305789
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttt 255  Q
    |||||| |||||| ||||||  ||||| ||||||||  | | |||||||||||  |||||||||| ||||||||| |||  ||||| |||| |||||    
T  24305693 atttgattttttttattcatcgcataaatgatgtataaggtttatattctatacaagatacatcaattactcaataaatttaaaaaattaaattttt 24305789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 276
Target Start/End: Complemental strand, 47844648 - 47844538
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    ||||||||||||||||  |||  |||| |||||||||||| |||||  | || ||||||| ||| | ||||||||  |||||||||  ||||||||||||    
T  47844648 acttttttgattcattgaatagttgatatatttgatctat-ttctaggttaggtacatcaattattgaatgaatctcaaaagttaa-atttttcttataa 47844551  T
Q  264 gtaggatcggagg 276  Q
     ||||| ||||||    
T  47844550 ataggaccggagg 47844538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 52427376 - 52427412
Alignment:
Q  160 tttgacttttttgattcattacataagtgatgtattt 196  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  52427376 tttgacttttttgattcattgcataaatgatgtattt 52427412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 1e-28; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 158 - 278
Target Start/End: Original strand, 44111772 - 44111891
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    |||||||||||||||||| ||||||||| ||||||||||| ||||||||||| |  |||||||||| |||||||||||||| ||||||| ||| ||||||    
T  44111772 catttgacttttttgattaattacataaatgatgtatttggtctatattctaaagaagatacatcaattactcaatgaatctaaaaagtcaac-tttttc 44111870  T
Q  258 ttataagtaggatcggaggga 278  Q
    |||||| || || ||||||||    
T  44111871 ttataaataagaccggaggga 44111891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 42670885 - 42670770
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    ||||||||||||| |||||||| ||||| |||| |||||| ||||||||||| |  |||||||| | |||| |||||||||||||||||||||| |||||    
T  42670885 catttgactttttagattcattgcataaatgatatatttggtctatattctaaacgagatacattaattacacaatgaatcaaaaaagttaact-ttttc 42670787  T
Q  258 ttataagtaggatcgga 274  Q
    |||||| ||||||||||    
T  42670786 ttataaataggatcgga 42670770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 158 - 278
Target Start/End: Complemental strand, 48361173 - 48361054
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    |||||||||||||||||||||| ||||| ||||||||||| ||||||||||| |  | |||||||| |||||||||||||| ||||||| ||  ||||||    
T  48361173 catttgacttttttgattcattgcataaatgatgtatttggtctatattctagacaaaatacatcaattactcaatgaatctaaaaagtcaa-atttttc 48361075  T
Q  258 ttataagtaggatcggaggga 278  Q
    |||||| ||||| ||||||||    
T  48361074 ttataaataggaccggaggga 48361054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 158 - 278
Target Start/End: Original strand, 53225671 - 53225790
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    ||||| |||||||||||||||| ||||| ||||||||||| |||| |||||||| || |||||| | ||| |||||||||| ||||||| || |||||||    
T  53225671 cattttacttttttgattcattgcataaatgatgtatttggtctacattctataccaaatacattaattattcaatgaatctaaaaagtcaa-ttttttc 53225769  T
Q  258 ttataagtaggatcggaggga 278  Q
    |||||| ||||| ||||||||    
T  53225770 ttataaataggaccggaggga 53225790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 159 - 270
Target Start/End: Original strand, 21554137 - 21554246
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttct 258  Q
    |||||||||||| |||||||| ||||| ||||||||||| |||||||||||||||| |||||| | |||||||||||||| ||||| | ||| |||||||    
T  21554137 atttgactttttcgattcattgcataaatgatgtatttggtctatattctatatca-atacattaattactcaatgaatctaaaaaatcaac-tttttct 21554234  T
Q  259 tataagtaggat 270  Q
    ||||| ||||||    
T  21554235 tataaataggat 21554246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 278
Target Start/End: Complemental strand, 48196011 - 48195892
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    ||||||||||||||| |||||| ||||| ||||||||||| ||||||||||| |  |||||| ||| |||||||||||||  |||||||| | |||||||    
T  48196011 catttgacttttttggttcattgcataaatgatgtatttggtctatattctagacaagatacgtcaattactcaatgaatttaaaaagtt-agttttttc 48195913  T
Q  258 ttataagtaggatcggaggga 278  Q
    |||||| ||||| | ||||||    
T  48195912 ttataaataggaccagaggga 48195892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 25477573 - 25477660
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagt 246  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||| |  | |||||||| |||||||||||||  |||||||    
T  25477573 atttgacttttttgattcattgcataaatgatgtatttgatctatattctacacaaaatacatcaattactcaatgaatttaaaaagt 25477660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 158 - 269
Target Start/End: Complemental strand, 30192017 - 30191907
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    ||||| |||||||||||||||| ||||| ||||||||||| ||||||||||| |  | |||||||| |||||||||||||| ||||| | || |||||||    
T  30192017 catttaacttttttgattcattgcataaatgatgtatttggtctatattctagacaaaatacatcaattactcaatgaatctaaaaaatcaa-ttttttc 30191919  T
Q  258 ttataagtagga 269  Q
    |||||| |||||    
T  30191918 ttataaatagga 30191907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 159 - 281
Target Start/End: Original strand, 45828443 - 45828564
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttct 258  Q
    |||||| ||||||||||| |||||||| ||||||||||| | |||||| || | || |||||| | |||||||||||||| ||||| | || ||||||||    
T  45828443 atttgatttttttgattctttacataaatgatgtatttggtttatattatagaccaaatacattaattactcaatgaatctaaaaaatcaa-ttttttct 45828541  T
Q  259 tataagtaggatcggagggaata 281  Q
    ||||| ||||| || ||||||||    
T  45828542 tataaataggaccgaagggaata 45828564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 255
Target Start/End: Complemental strand, 4386256 - 4386160
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttt 255  Q
    ||||||||||||||||||||||||||| ||||||||||  |||||||| || || | |||||||| ||||| |||||||  ||||||| || |||||    
T  4386256 atttgacttttttgattcattacataaatgatgtatttagtctatattgtagataaaatacatcaattacttaatgaatttaaaaagtcaaattttt 4386160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 274
Target Start/End: Original strand, 32714296 - 32714411
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    |||||||||||||||||||||||||||| ||||||||||  ||||||||||| |  | |||||||| | | | ||||||||  |||||| || ||||||     
T  32714296 catttgacttttttgattcattacataaatgatgtatttagtctatattctagacaaaatacatcaatcattgaatgaatc-taaaagtcaatttttttt 32714394  T
Q  258 ttataagtaggatcgga 274  Q
    |||||| ||||||||||    
T  32714395 ttataaataggatcgga 32714411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 189 - 276
Target Start/End: Complemental strand, 41116652 - 41116566
Alignment:
Q  189 atgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataagtaggatcggagg 276  Q
    ||||||||| |||||||| || || |||||||||| |||||||||||||| ||||||||||  |||||||||||| ||||| ||||||    
T  41116652 atgtatttggtctatattttagataagatacatcaattactcaatgaatctaaaaagttaa-atttttcttataaataggaccggagg 41116566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 158 - 269
Target Start/End: Original strand, 42169070 - 42169180
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    |||||||||||||||||||||||||||| ||||||||||| || |||||| | |  | |||||||| ||| ||||| |||| ||||||| ||  ||||||    
T  42169070 catttgacttttttgattcattacataaatgatgtatttggtccatattcaagacaaaatacatcaattattcaataaatctaaaaagtcaa-atttttc 42169168  T
Q  258 ttataagtagga 269  Q
    |||||| |||||    
T  42169169 ttataaatagga 42169180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 276
Target Start/End: Complemental strand, 42804368 - 42804260
Alignment:
Q  166 ttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataagt 265  Q
    ||||||||||||||| |||  ||||||||||| ||||| ||||| || || ||||||| ||| | |||||||| |||||||||||| ||||||||||| |    
T  42804368 ttttttgattcattaaatagttgatgtatttggtctat-ttctaaattaggtacatcaattattgaatgaatctaaaaagttaact-ttttcttataaat 42804271  T
Q  266 aggatcggagg 276  Q
    |||| ||||||    
T  42804270 aggaccggagg 42804260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 8347766 - 8347651
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    |||||||||||||| |||||||  |||| ||||||||| | |||||||| ||||  | |||||||| | |||||||||||| ||||||| ||  ||||||    
T  8347766 catttgactttttttattcattgtataaatgatgtattcggtctatattttatacaaaatacatcaatcactcaatgaatctaaaaagtcaa-atttttc 8347668  T
Q  258 ttataagtaggatcgga 274  Q
    |||||| ||||| ||||    
T  8347667 ttataaataggagcgga 8347651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 278
Target Start/End: Complemental strand, 47943848 - 47943729
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    |||||||| ||||||||||||| ||||| ||||||||||  |||||||| |||| ||  ||||| | ||||||||| |||| ||||||| || |||||||    
T  47943848 catttgacatttttgattcattgcataaatgatgtatttagtctatattttataccaagtacattaattactcaattaatctaaaaagtcaa-ttttttc 47943750  T
Q  258 ttataagtaggatcggaggga 278  Q
     ||||| ||||| || |||||    
T  47943749 atataaataggaccgaaggga 47943729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 281
Target Start/End: Original strand, 696379 - 696499
Alignment:
Q  160 tttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttctt 259  Q
    |||||||||||||||||||| ||||| ||||| ||||  ||||||||||| |  |||||||| | |||   ||| ||||  |||| ||||| ||||||||    
T  696379 tttgacttttttgattcattgcataaatgatggatttagtctatattctaaacaagatacattaattatataataaatcttaaaaattaac-tttttctt 696477  T
Q  260 ataagtaggatcggagggaata 281  Q
    |||| ||||| |||||||||||    
T  696478 ataaataggaccggagggaata 696499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 281
Target Start/End: Original strand, 764677 - 764797
Alignment:
Q  160 tttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttctt 259  Q
    |||||||||||||||||||| ||||| ||||| ||||  ||||||||||| |  |||||||| | |||   ||| ||||  |||| ||||| ||||||||    
T  764677 tttgacttttttgattcattgcataaatgatggatttagtctatattctaaacaagatacattaattatataataaatcttaaaaattaac-tttttctt 764775  T
Q  260 ataagtaggatcggagggaata 281  Q
    |||| ||||| |||||||||||    
T  764776 ataaataggaccggagggaata 764797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 263
Target Start/End: Complemental strand, 3163016 - 3162912
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    |||||||||||||||||||||| ||||| |||||||||   ||||||||||| |  ||||| || | |||| ||||||||  ||||||| || |||||||    
T  3163016 catttgacttttttgattcattgcataaatgatgtattgagtctatattctagacaagatatattaattacacaatgaatttaaaaagtcaa-ttttttc 3162918  T
Q  258 ttataa 263  Q
    ||||||    
T  3162917 ttataa 3162912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 276
Target Start/End: Complemental strand, 16412354 - 16412238
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttct 258  Q
    ||||||||| |||||  |||| ||||| | ||||||||| ||||||||||| | || ||| |||| ||| |||||||||| ||||||| || ||||||||    
T  16412354 atttgacttctttgacacattgcataaataatgtatttggtctatattctagaccaaatatatcaattattcaatgaatctaaaaagtcaa-ttttttct 16412256  T
Q  259 tataagtaggatcggagg 276  Q
    ||||| ||| | ||||||    
T  16412255 tataaatagaaccggagg 16412238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 277
Target Start/End: Complemental strand, 43020870 - 43020759
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    ||||||||||||||||  |||  ||||||||||| ||||| |||||  | || ||||||| ||| | |||||||| |||||||||||| |||||||||||    
T  43020870 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggttaggtacatcaattattgaatgaatctaaaaagttaact-ttttcttataa 43020773  T
Q  264 gtaggatcggaggg 277  Q
     ||||| |||||||    
T  43020772 ataggaccggaggg 43020759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 263
Target Start/End: Original strand, 43117889 - 43117985
Alignment:
Q  166 ttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    |||||||||| ||| ||||| ||||||||||| |||||||| |||| || |||||||| ||| |||||||||  ||||| | || |||||||||||||    
T  43117889 ttttttgatttattgcataaatgatgtatttggtctatattttataccaaatacatcaattattcaatgaatgtaaaaaatcaa-ttttttcttataa 43117985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 25700566 - 25700486
Alignment:
Q  166 ttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagt 246  Q
    ||||| ||||||||  |||| |||||||| || |||||||| || |||| |||||||||||||| |||||||| |||||||    
T  25700566 tttttagattcattcaataaatgatgtatgtggtctatattgtagatcacatacatcatttactgaatgaatctaaaaagt 25700486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 159 - 263
Target Start/End: Original strand, 36132663 - 36132766
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttct 258  Q
    |||||||||||||||||||||  |||| ||||||||||  ||||||||| | |  ||||||||||  ||||||||| |||  |||||| || ||||||||    
T  36132663 atttgacttttttgattcattgtataaatgatgtatttagtctatattcaagacaagatacatcaactactcaatgtatcttaaaagtcaa-ttttttct 36132761  T
Q  259 tataa 263  Q
    |||||    
T  36132762 tataa 36132766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 35429801 - 35429880
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatc 238  Q
    ||||||||||||| |||| || |||||  |||||||||| ||||||||||| |  |||||||||| ||||||||| ||||    
T  35429801 atttgactttttttattcgttgcataaaagatgtatttggtctatattctagacaagatacatcaattactcaattaatc 35429880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 238
Target Start/End: Complemental strand, 26066484 - 26066410
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatc 238  Q
    ||||||| ||||||||| |||| |||||||| || ||||||||||| | | ||||||||| ||| ||||||||||    
T  26066484 actttttagattcattaaataactgatgtatctggtctatattctagaccggatacatcaattattcaatgaatc 26066410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 244
Target Start/End: Complemental strand, 45096695 - 45096609
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaa 244  Q
    |||||||||||||||||| ||| ||||| |||| |||||| |||||| |||| |  |||||||||| ||| ||||| |||| |||||    
T  45096695 catttgacttttttgatttattgcataaatgatatatttggtctataatctagacaagatacatcaattattcaataaatctaaaaa 45096609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 9044415 - 9044500
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaa 244  Q
    |||||||||||||||||||||  |||| |||||| ||||  |||||||||| |  | |||||||| ||||||||| |||| |||||    
T  9044415 atttgacttttttgattcattgtataaatgatgtctttggcctatattctagacaaaatacatcaattactcaataaatccaaaaa 9044500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 19150844 - 19150791
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctata 211  Q
    ||||| ||||||| |||||||| ||||| ||||||||||| |||||||||||||    
T  19150844 cattttactttttcgattcattgcataaatgatgtatttggtctatattctata 19150791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 255
Target Start/End: Complemental strand, 50121558 - 50121461
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttt 255  Q
    |||||||||||||| ||||||| ||||| |||| |||||| ||||||| ||| |  |||||||||| | | ||||| |||| ||||||| || |||||    
T  50121558 catttgacttttttaattcattgcataaatgatatatttggtctatatactagacaagatacatcaatcattcaataaatctaaaaagtcaaattttt 50121461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 275
Target Start/End: Complemental strand, 9894717 - 9894630
Alignment:
Q  187 tgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataagtaggatcggag 275  Q
    ||||||||||||||||||||||| |  |||||||| | | ||  |||||||| ||||||| ||| |||||||||||| ||||| |||||    
T  9894717 tgatgtatttgatctatattctagacaagatacattaataacataatgaatctaaaaagtcaac-tttttcttataaataggaccggag 9894630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 223
Target Start/End: Original strand, 17284763 - 17284827
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatca 223  Q
    |||||| |||||||||||||| ||||| |||||||| || ||||||||||| |  ||||||||||    
T  17284763 atttgatttttttgattcattgcataaatgatgtatgtggtctatattctagacaagatacatca 17284827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 276
Target Start/End: Original strand, 20459274 - 20459384
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    ||||||||||||||||  |||  ||||||||||| ||||| |||||    || ||||||| ||| | |||||||| ||||||||||| ||||||||||||    
T  20459274 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaagttaac-tttttcttataa 20459371  T
Q  264 gtaggatcggagg 276  Q
     ||||| ||||||    
T  20459372 ataggaccggagg 20459384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 276
Target Start/End: Complemental strand, 47866150 - 47866040
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    ||||||||||||||||  |||  ||||||||||| ||||| |||||    || ||||||| ||| | |||||||| |||||||||||| |||||||||||    
T  47866150 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaagttaact-ttttcttataa 47866053  T
Q  264 gtaggatcggagg 276  Q
     ||||| ||||||    
T  47866052 ataggaccggagg 47866040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 55951690 - 55951777
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagt 246  Q
    ||||||||||||| |||| ||| |||| ||||||||||||| ||||||| | |  |||||||| | ||| ||||| |||| |||||||    
T  55951690 atttgacttttttaattcgttatataaatgatgtatttgatttatattcaagacaagatacattaattaatcaataaatctaaaaagt 55951777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 274
Target Start/End: Original strand, 20745365 - 20745473
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    ||||||||||||||||  |||  ||||||||||||||||| |||||    || ||||||| ||| | |||||||| ||||| ||||| ||||||||||||    
T  20745365 acttttttgattcattgaatagttgatgtatttgatctat-ttctaggctaggtacatcaattattgaatgaatctaaaaaattaac-tttttcttataa 20745462  T
Q  264 gtaggatcgga 274  Q
     ||||| ||||    
T  20745463 ataggaccgga 20745473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 24100824 - 24100756
Alignment:
Q  214 agatacatcatttactcaatgaatcaaaaaagttaacttttttcttataagtaggatcggagggaataat 283  Q
    |||||||| | ||| |||||||||| |||||||||| || ||||||||||  ||||||||||||| ||||    
T  24100824 agatacattaattattcaatgaatctaaaaagttaa-ttatttcttataataaggatcggagggagtaat 24100756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 44061417 - 44061466
Alignment:
Q  160 tttgacttttttgattcattacataagtgatgtatttgatctatattcta 209  Q
    ||||| |||||||||||||| ||||| | ||||||||| |||||||||||    
T  44061417 tttgagttttttgattcattgcataaataatgtatttggtctatattcta 44061466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 9e-27; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 158 - 255
Target Start/End: Original strand, 16448816 - 16448913
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttt 255  Q
    |||||||||||||||||||||| ||||| |||| |||||| | |||||||||||| |||||||||| |||||||||||||| |||||||||| |||||    
T  16448816 catttgacttttttgattcattgcataaatgatatatttggtttatattctatataagatacatcaattactcaatgaatctaaaaagttaaattttt 16448913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 276
Target Start/End: Complemental strand, 5031585 - 5031468
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    |||||||||||||||||||||| ||||| ||||||||||  ||||||||||| |  |||||||||| ||||| |||||||  ||||||||||  ||||||    
T  5031585 catttgacttttttgattcattgcataaatgatgtatttagtctatattctagacaagatacatcaattacttaatgaatttaaaaagttaa-atttttc 5031487  T
Q  258 ttataagtaggatcggagg 276  Q
    |||||| ||||| ||||||    
T  5031486 ttataaataggaccggagg 5031468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 274
Target Start/End: Original strand, 7693060 - 7693175
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    ||||| |||||||||||||||| ||||| ||||||||||  |||||||| |||| || |||||| | |||||||||||||| ||||||| || |||||||    
T  7693060 cattttacttttttgattcattgcataaatgatgtatttagtctatattttataccaaatacattaattactcaatgaatctaaaaagtcaa-ttttttc 7693158  T
Q  258 ttataagtaggatcgga 274  Q
    |||||| ||||| ||||    
T  7693159 ttataaataggaccgga 7693175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 158 - 269
Target Start/End: Complemental strand, 15720320 - 15720210
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    ||||| |||||||||||||||| ||||| | |||||||||||||||||| |||| || |||||||| |||||| || | || |||||||||| |||||||    
T  15720320 catttaacttttttgattcattccataaataatgtatttgatctatattttataacaaatacatcaattactctataagtctaaaaagttaa-ttttttc 15720222  T
Q  258 ttataagtagga 269  Q
    |||||| |||||    
T  15720221 ttataaatagga 15720210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 276
Target Start/End: Original strand, 10184579 - 10184695
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttct 258  Q
    ||||||||||||| |||||||  |||| ||||||||||| ||||||||||  |||| |||||||| ||| |||||||||| |||||||  | ||||||||    
T  10184579 atttgactttttttattcattgtataaatgatgtatttggtctatattctggatcatatacatcaattattcaatgaatctaaaaagtcga-ttttttct 10184677  T
Q  259 tataagtaggatcggagg 276  Q
    ||||| || |||||||||    
T  10184678 tataaatatgatcggagg 10184695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 160 - 256
Target Start/End: Original strand, 42122995 - 42123091
Alignment:
Q  160 tttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaactttttt 256  Q
    |||||||||||||||||||| ||||| ||||||||||| | ||||||||| |  |||||||| | |||||||||||||| ||||||| || ||||||    
T  42122995 tttgacttttttgattcattgcataaatgatgtatttggtatatattctagacaagatacattaattactcaatgaatctaaaaagtcaattttttt 42123091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 243
Target Start/End: Original strand, 24618987 - 24619070
Alignment:
Q  160 tttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaa 243  Q
    |||||||||||||||||||| ||||| ||||||||||| ||||||||||||| ||  ||||| | |||||||||||||| ||||    
T  24618987 tttgacttttttgattcattgcataaatgatgtatttggtctatattctataacaagtacattaattactcaatgaatctaaaa 24619070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 167 - 269
Target Start/End: Complemental strand, 10839875 - 10839774
Alignment:
Q  167 tttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataagta 266  Q
    ||||||||||||| ||||| ||||||||||| ||||||||||||| ||  ||||| | ||| |||||||||| ||||||| || ||||||||||||| ||    
T  10839875 tttttgattcattgcataaatgatgtatttggtctatattctataccaagtacattaattattcaatgaatctaaaaagtcaa-ttttttcttataaata 10839777  T
Q  267 gga 269  Q
    |||    
T  10839776 gga 10839774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 8453622 - 8453737
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    ||||||| |||||||||||||||||||| | |||||||| |||||||||||| |  ||||| |||| |||||||||| ||| ||||| | ||  ||||||    
T  8453622 catttgaattttttgattcattacataaataatgtattt-atctatattctagacaagatatatcaattactcaatgtatctaaaaaatcaa-atttttc 8453719  T
Q  258 ttataagtaggatcggag 275  Q
    |||||| |||||||||||    
T  8453720 ttataaataggatcggag 8453737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 8793839 - 8793755
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaa 243  Q
    ||||||||||||||||||||| ||||| ||||||||||  |||||||| || | || |||||||| |||||||||||||| ||||    
T  8793839 atttgacttttttgattcattgcataaatgatgtatttagtctatattatagaccaaatacatcaattactcaatgaatctaaaa 8793755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 255
Target Start/End: Complemental strand, 8803348 - 8803252
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttt 255  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||||||||| |  |||||||| | ||||  ||| |||  ||||||||||||||||    
T  8803348 atttaacttttttgattcattacataaatgatgtatttggtctatattctagacaagatacattaattacataataaatataaaaagttaacttttt 8803252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 278
Target Start/End: Original strand, 35149695 - 35149814
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    |||||||||||||||||| ||| ||||| ||||||||||| ||||||||||| |  |||||||| | |||| |||| |||| ||||| | ||| ||||||    
T  35149695 catttgacttttttgattaattgcataaatgatgtatttggtctatattctagacaagatacattaattacacaataaatctaaaaaatcaac-tttttc 35149793  T
Q  258 ttataagtaggatcggaggga 278  Q
    |||||| ||||| || |||||    
T  35149794 ttataaataggaccgaaggga 35149814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 255
Target Start/End: Original strand, 32597525 - 32597622
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttt 255  Q
    |||||||||||||||||||||| | |||  |||||||||  |||||||| |||| ||  ||||| | |||||||||||||   |||||||||||||||    
T  32597525 catttgacttttttgattcattgcgtaaacgatgtattttgtctatattttataccacgtacattaattactcaatgaattttaaaagttaacttttt 32597622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 40483311 - 40483407
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttt 255  Q
    |||| |||||||| ||||||| ||||| ||||||||||| || |||||||| || ||||| |||| ||||||||| |||  ||||||| || |||||    
T  40483311 atttaacttttttaattcattgcataaatgatgtatttggtccatattctagataagatatatcaattactcaataaattgaaaaagtcaaattttt 40483407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 27789385 - 27789314
Alignment:
Q  173 attcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaa 244  Q
    |||||||  |||| ||||||||||| || ||||| |||| ||||||||||| ||| ||||||||||||||||    
T  27789385 attcattgaataactgatgtatttggtcaatattatataccagatacatcaattattcaatgaatcaaaaaa 27789314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 278
Target Start/End: Complemental strand, 1223242 - 1223125
Alignment:
Q  160 tttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttctt 259  Q
    ||||||| |||| ||||||| ||||| | ||||||||| |||||||| |  |  |||||||| | |||| ||||||||| ||||||| | ||||||||||    
T  1223242 tttgactattttaattcattgcataaattatgtatttggtctatatttttgacaagatacattaattacacaatgaatctaaaaagtca-cttttttctt 1223144  T
Q  260 ataagtaggatcggaggga 278  Q
    |||| || || ||||||||    
T  1223143 ataaatatgaccggaggga 1223125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 274
Target Start/End: Complemental strand, 12958890 - 12958782
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    ||||||||||||||||  |||  ||||||||||| ||||| |||||    || ||||||| ||| | |||||||| |||||||||||| |||||||||||    
T  12958890 acttttttgattcattgaatagttgatgtatttggtctat-ttctaagctaggtacatcaattattgaatgaatctaaaaagttaact-ttttcttataa 12958793  T
Q  264 gtaggatcgga 274  Q
     ||||||||||    
T  12958792 ataggatcgga 12958782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 283
Target Start/End: Complemental strand, 3236450 - 3236329
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttct 258  Q
    ||||||||||||| |||||||  |||| ||||||||||| |||| ||| || |  |||||||||| ||| |||||||||  ||||||| || |||||||     
T  3236450 atttgacttttttaattcattgtataaatgatgtatttggtctaaattttaaactagatacatcaattattcaatgaatttaaaaagtcaa-ttttttc- 3236353  T
Q  259 tataagtaggatcggagggaataat 283  Q
     |||| || ||||||||||| ||||    
T  3236352 -ataaataagatcggagggagtaat 3236329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 276
Target Start/End: Complemental strand, 6899534 - 6899424
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    ||||||||||||||||  |||  ||||||||||||||||| |||||  | || ||||||| ||| | ||||||||  |||||||||  ||||||||||||    
T  6899534 acttttttgattcattgaatagttgatgtatttgatctat-ttctaggttaggtacatcaattattgaatgaatctcaaaagttaa-atttttcttataa 6899437  T
Q  264 gtaggatcggagg 276  Q
     ||||| ||||||    
T  6899436 ataggaccggagg 6899424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 274
Target Start/End: Original strand, 24915205 - 24915311
Alignment:
Q  166 ttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataagt 265  Q
    ||||||||||||||| |||| ||||||||||  ||||| |||||    |||||||||| ||| | |||||||| |||||||||| ||||||| ||||| |    
T  24915205 ttttttgattcattaaataattgatgtattttgtctat-ttctaagctagatacatcaattatttaatgaatctaaaaagttaa-ttttttcatataaat 24915302  T
Q  266 aggatcgga 274  Q
    |||| ||||    
T  24915303 aggaccgga 24915311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 275
Target Start/End: Complemental strand, 4156446 - 4156385
Alignment:
Q  214 agatacatcatttactcaatgaatcaaaaaagttaacttttttcttataagtaggatcggag 275  Q
    |||||||||| |||||||||| ||| || |||| || ||||||||||||| |||||| ||||    
T  4156446 agatacatcaattactcaatgtatctaacaagtcaatttttttcttataaataggattggag 4156385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 276
Target Start/End: Original strand, 8803313 - 8803372
Alignment:
Q  216 atacatcatttactcaatgaatcaaaaaagttaacttttttcttataagtaggatcggagg 276  Q
    ||||||||||||   ||||||||||||||||||| | |||| |||||| ||||||||||||    
T  8803313 atacatcatttatgtaatgaatcaaaaaagttaaatatttt-ttataaataggatcggagg 8803372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 273
Target Start/End: Original strand, 15726853 - 15726900
Alignment:
Q  225 ttactcaatgaatcaaaaaagttaacttttttcttataagtaggatcgg 273  Q
    |||||||||||||| ||||||| || ||||||||||||| |||||||||    
T  15726853 ttactcaatgaatctaaaaagtcaa-ttttttcttataaataggatcgg 15726900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 262
Target Start/End: Original strand, 22193619 - 22193690
Alignment:
Q  190 tgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttata 262  Q
    ||||| ||||||||||| ||  |||||||||||| ||  |||||||||| ||||||| || ||||||||||||    
T  22193619 tgtatctgatctatattataattcagatacatcagttgttcaatgaatctaaaaagtgaa-ttttttcttata 22193690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 256
Target Start/End: Complemental strand, 34711196 - 34711104
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaactttttt 256  Q
    |||||||||||| ||| ||| | ||||||||||  | |||||| || |  | |||||||| |||||||||||||| ||||||| || ||||||    
T  34711196 acttttttgatttattgcattaatgatgtatttagtttatattttagacaaaatacatcaattactcaatgaatctaaaaagtcaattttttt 34711104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 36191775 - 36191852
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatc 238  Q
    |||||||||||||  |||||| ||||| |||||||||||   |||||| ||||  |||||||||| ||| ||||||||||    
T  36191775 atttgacttttttctttcattgcataaatgatgtatttg--gtatattttatacaagatacatcaattattcaatgaatc 36191852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 276
Target Start/End: Original strand, 36366058 - 36366168
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    ||||||||||||||||  |||  ||||||||||| ||||| |||||    || ||||||| ||| | |||||||| ||||| ||||| ||||||||||||    
T  36366058 acttttttgattcattcaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaaattaac-tttttcttataa 36366155  T
Q  264 gtaggatcggagg 276  Q
     ||||| ||||||    
T  36366156 ataggaccggagg 36366168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 9e-24; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 158 - 278
Target Start/End: Complemental strand, 38394549 - 38394430
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    ||||| |||||||||||||||| ||||| ||||||||||| |||| |||||||| ||  ||||| | ||| |||||||||| ||||||| || |||||||    
T  38394549 cattttacttttttgattcattgcataaatgatgtatttggtctacattctataccaagtacattaattattcaatgaatctaaaaagtcaa-ttttttc 38394451  T
Q  258 ttataagtaggatcggaggga 278  Q
    |||||| ||||||||||||||    
T  38394450 ttataaataggatcggaggga 38394430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 919670 - 919754
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaa 243  Q
    |||||||||||||||||||||  |||| ||||||||||| |||||||||||||  |||||||||| |||||||||||||| ||||    
T  919670 atttgacttttttgattcattcaataaatgatgtatttggtctatattctatactagatacatcaattactcaatgaatctaaaa 919754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 246
Target Start/End: Complemental strand, 18473596 - 18473508
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagt 246  Q
    ||||||||||||||||||||||  |||| ||||| ||||||||||||||||| |  |||||||||| |||||||||||||| |||||||    
T  18473596 catttgacttttttgattcattgtataaatgatgcatttgatctatattctagacaagatacatcaattactcaatgaatctaaaaagt 18473508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 5002167 - 5002283
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    |||||||||||||||||| ||| ||||| |||||||||||||||||||| || |  |||||||||| ||||||||| |||| |||||| |||   |||||    
T  5002167 catttgacttttttgattaattgcataaatgatgtatttgatctatattttagacaagatacatcaattactcaataaatctaaaaag-taaaaattttc 5002265  T
Q  258 ttataagtaggatcggag 275  Q
    |||||| ||||| |||||    
T  5002266 ttataaataggagcggag 5002283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 166 - 278
Target Start/End: Complemental strand, 11932083 - 11931971
Alignment:
Q  166 ttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataagt 265  Q
    |||||||||| |||| |||| ||||||||||| |||||||| || |  |||||||| | |||| ||||||||| ||||||| || ||||||||||||| |    
T  11932083 ttttttgatttattatataaatgatgtatttggtctatattttagacaagatacattaattacacaatgaatctaaaaagtcaatttttttcttataaat 11931984  T
Q  266 aggatcggaggga 278  Q
    |||| ||||||||    
T  11931983 aggaccggaggga 11931971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 158 - 244
Target Start/End: Complemental strand, 33478228 - 33478142
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaa 244  Q
    |||||||| ||||||||||||| ||||| |||||||||||  |||||||||| |  |||||||||| |||||||||||||| |||||    
T  33478228 catttgacatttttgattcattgcataaatgatgtatttggcctatattctagacgagatacatcaattactcaatgaatctaaaaa 33478142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 159 - 278
Target Start/End: Original strand, 34297202 - 34297323
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaact--ttttt 256  Q
    ||||||||||||| ||||||| ||||| ||||||| |||||||||||| || |  ||| |||||| ||||| |||||||| ||||||| || |  |||||    
T  34297202 atttgacttttttaattcattgcataaatgatgtaattgatctatattttagacaagacacatcaattacttaatgaatctaaaaagtcaatttattttt 34297301  T
Q  257 cttataagtaggatcggaggga 278  Q
     |||||| ||||||||||||||    
T  34297302 tttataaataggatcggaggga 34297323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 278
Target Start/End: Original strand, 13789759 - 13789878
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    ||||| |||||||||||||||| ||||| ||||||||||| |||| |||||||| ||  ||||| | ||| ||||||||||  |||||| ||| ||||||    
T  13789759 cattttacttttttgattcattgcataaatgatgtatttggtctacattctataccaagtacattaattattcaatgaatctgaaaagtcaac-tttttc 13789857  T
Q  258 ttataagtaggatcggaggga 278  Q
    |||||| ||| | ||||||||    
T  13789858 ttataaatagaaccggaggga 13789878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 36434706 - 36434802
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttt 255  Q
    |||||| |||||| ||||||||||||| |||| |||||| | |||||| || |  |||||||||| ||||| |||||||| |||||||||| |||||    
T  36434706 atttgattttttttattcattacataaatgatatatttggtttatattttagacaagatacatcaattacttaatgaatctaaaaagttaaattttt 36434802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 278
Target Start/End: Original strand, 21488311 - 21488429
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttct 258  Q
    ||||||||||||| ||||||| ||||| | ||||||||| ||||||||||| |  | |||||| | ||||  ||||| |  ||||| ||||| |||||||    
T  21488311 atttgacttttttaattcattgcataaataatgtatttggtctatattctagacaaaatacattaattacataatgagtttaaaaaattaac-tttttct 21488409  T
Q  259 tataagtaggatcggaggga 278  Q
    ||||| ||||||||||||||    
T  21488410 tataaataggatcggaggga 21488429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 263
Target Start/End: Complemental strand, 39239909 - 39239811
Alignment:
Q  165 cttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    ||||||| ||||||| ||||| | || |||||||||||||||| |||  |||||||| | |||| ||||||||| ||||||  || |||||||||||||    
T  39239909 ctttttttattcattgcataaataatatatttgatctatattcaatacaagatacattaattacacaatgaatctaaaaagacaatttttttcttataa 39239811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 246
Target Start/End: Original strand, 36286089 - 36286174
Alignment:
Q  161 ttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagt 246  Q
    |||| |||||||||||||| ||||| ||||||| ||| ||||||||||| |   ||||||||| ||||||||| |||| |||||||    
T  36286089 ttgatttttttgattcattgcataaatgatgtagttggtctatattctagacatgatacatcaattactcaattaatctaaaaagt 36286174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 18391525 - 18391573
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatatt 206  Q
    |||||||||||||||||||||| ||||| | ||||||||||||||||||    
T  18391525 catttgacttttttgattcattgcataaataatgtatttgatctatatt 18391573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 13664973 - 13665024
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattcta 209  Q
    |||||||||||||| ||| ||| ||||| |||||||||||||||||||||||    
T  13664973 catttgacttttttaattaattgcataaatgatgtatttgatctatattcta 13665024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 256
Target Start/End: Complemental strand, 14723476 - 14723409
Alignment:
Q  189 atgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaactttttt 256  Q
    ||||||||| ||||||||||| || ||||| |||| |||||||||||||  |||||||||| ||||||    
T  14723476 atgtatttggtctatattctagattagatatatcaattactcaatgaatttaaaaagttaattttttt 14723409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 160 - 256
Target Start/End: Original strand, 19295986 - 19296083
Alignment:
Q  160 tttgacttttttgattcattacataagtgatgt-atttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaactttttt 256  Q
    ||||| ||||||||||||||  |||| |||||| ||||| | ||| ||||||| ||  ||||| | |||||||||||||| ||||||| |||||||||    
T  19295986 tttgatttttttgattcattggataaatgatgttatttggtatatcttctataccaagtacattagttactcaatgaatctaaaaagtcaactttttt 19296083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 22102028 - 22101943
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaa 244  Q
    ||||||||||||||||| |||  |||| | |||||||||||||||||| || |  |||||||| | |||| ||||||||| |||||    
T  22102028 atttgacttttttgatttattgtataaataatgtatttgatctatattttagacaagatacattaattacacaatgaatctaaaaa 22101943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 278
Target Start/End: Complemental strand, 29299479 - 29299359
Alignment:
Q  158 catttgacttttttga-ttcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaactttttt 256  Q
    |||||||||||||||| ||||||  |||| ||||||||| | |||||||| || |  | |||||||| | |||||||||||| ||||| | ||  |||||    
T  29299479 catttgacttttttgaattcattgtataaatgatgtattcggtctatattttagacaaaatacatcaatcactcaatgaatctaaaaaatcaa-attttt 29299381  T
Q  257 cttataagtaggatcggaggga 278  Q
    ||||||| ||||| ||||||||    
T  29299380 cttataaataggaccggaggga 29299359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 274
Target Start/End: Original strand, 14913141 - 14913248
Alignment:
Q  166 ttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataagt 265  Q
    |||||||||||||| | | | | ||||||||| |||||||| ||||||| ||| || | |||||||||||||  ||||| | ||  |||||||||||| |    
T  14913141 ttttttgattcattgcctgaataatgtatttggtctatattttatatcaaatatattaattactcaatgaatttaaaaaatcaa-atttttcttataaat 14913239  T
Q  266 aggatcgga 274  Q
    |||||||||    
T  14913240 aggatcgga 14913248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 276
Target Start/End: Complemental strand, 26327650 - 26327539
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    |||||||||||| |||  |||  ||||||||||| ||||| || || || || ||||||| ||| | |||||||| |||||||||| |||||||||||||    
T  26327650 acttttttgatttattgaatagttgatgtatttggtctatttt-tagattaggtacatcaattattgaatgaatctaaaaagttaatttttttcttataa 26327552  T
Q  264 gtaggatcggagg 276  Q
     || || ||||||    
T  26327551 ataagaccggagg 26327539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 284
Target Start/End: Original strand, 29031070 - 29031188
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    ||||||||||||||||  |||  ||||||||||| ||||| |||||    || ||||||| ||  | |||||||| ||||||||||| ||||||||||||    
T  29031070 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattgttgaatgaatctaaaaagttaac-tttttcttataa 29031167  T
Q  264 gtaggatcggagggaataatt 284  Q
     ||||| |||||||| |||||    
T  29031168 ataggaccggagggagtaatt 29031188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 278
Target Start/End: Original strand, 1015189 - 1015301
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    ||||||||||||||||  |||  ||||||||||| ||||| |||||  | || ||||||  ||| | |||||||| ||||||||||| ||||||||||||    
T  1015189 acttttttgattcattgaatagttgatgtatttggtctat-ttctaagttaggtacatcgattattgaatgaatctaaaaagttaac-tttttcttataa 1015286  T
Q  264 gtaggatcggaggga 278  Q
     ||| | ||||||||    
T  1015287 atagaaccggaggga 1015301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 1248942 - 1248885
Alignment:
Q  166 ttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatca 223  Q
    |||||| |||||||  |||| ||||||||||||||||||||||| |  ||||||||||    
T  1248942 tttttttattcatttgataaatgatgtatttgatctatattctagacaagatacatca 1248885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 281
Target Start/End: Complemental strand, 27488461 - 27488346
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    ||||||||||||||||  |||  |||| |||||| ||||| |||||    |||||||||| ||| | |||||||| ||||| |||| |||||||||||||    
T  27488461 acttttttgattcattcaatagttgatatatttggtctat-ttctaggctagatacatcaattattgaatgaatctaaaaaattaa-ttttttcttataa 27488364  T
Q  264 gtaggatcggagggaata 281  Q
     ||||| |||||| ||||    
T  27488363 ataggaccggaggtaata 27488346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 14221872 - 14221920
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatatt 206  Q
    |||||||||||||||||| ||| ||||| |||| |||||||| ||||||    
T  14221872 catttgacttttttgattaattgcataaatgatatatttgatttatatt 14221920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 276
Target Start/End: Complemental strand, 15968425 - 15968315
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    ||||||||||||||||  |||  ||||||||||| ||||| |||||    |||||||| | ||| | |||||||| ||||| ||||| ||||||||||||    
T  15968425 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggctagatacattaattattgaatgaatctaaaaaattaac-tttttcttataa 15968328  T
Q  264 gtaggatcggagg 276  Q
     ||||| ||||||    
T  15968327 ataggaccggagg 15968315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 282
Target Start/End: Original strand, 20502170 - 20502237
Alignment:
Q  214 agatacatcatttactcaatgaatcaaaaaagttaacttttttcttataagtaggatcggagggaataa 282  Q
    |||||||||| |||| ||||||| ||||||| |||| || ||||||||||  |||| ||||||||||||    
T  20502170 agatacatcacttacacaatgaaccaaaaaaattaa-ttgtttcttataataaggaccggagggaataa 20502237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 278
Target Start/End: Complemental strand, 29002807 - 29002744
Alignment:
Q  214 agatacatcatttactcaatgaatcaaaaaagttaacttttttcttataagtaggatcggaggga 278  Q
    |||||||||| |||| ||||||| ||||||||| || || ||||||||||  |||||||||||||    
T  29002807 agatacatcacttacacaatgaaccaaaaaagtcaa-ttgtttcttataacaaggatcggaggga 29002744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 278
Target Start/End: Original strand, 38978825 - 38978888
Alignment:
Q  214 agatacatcatttactcaatgaatcaaaaaagttaacttttttcttataagtaggatcggaggga 278  Q
    |||||||||| |||| ||||||| ||||||| |||| || ||||||||||  |||||||||||||    
T  38978825 agatacatcacttacacaatgaaccaaaaaaattaa-ttgtttcttataataaggatcggaggga 38978888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 278
Target Start/End: Original strand, 12999782 - 12999902
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatc-aaaaaagttaactttttt 256  Q
    ||||| |||||||||||||||| |||||  |||||||||||||||||||||||| ||  ||||| | ||||||||||||||  ||||||| ||| ||||     
T  12999782 catttaacttttttgattcattgcataaaagatgtatttgatctatattctataccaagtacattaattactcaatgaatctgaaaaagtcaac-tttta 12999880  T
Q  257 cttataagtaggatcggaggga 278  Q
    ||||||| || |||||||||||    
T  12999881 cttataaataagatcggaggga 12999902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 12450471 - 12450381
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaa 249  Q
    ||||||||||||| ||||||| ||||| |||||||||| ||||||||| || || | |||||||| ||| |||||||||| ||||||||||    
T  12450471 atttgacttttttaattcattgcataaatgatgtatttaatctatattttagataaaatacatcaattattcaatgaatccaaaaagttaa 12450381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 161 - 274
Target Start/End: Complemental strand, 28630871 - 28630759
Alignment:
Q  161 ttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttctta 260  Q
    |||||||||| |||||||| ||||| | ||||||||| |||||||| || |  |||||||||| ||||||||||||| |||||||| ||  |||||||||    
T  28630871 ttgactttttagattcattgcataaattatgtatttggtctatattatagacaagatacatcaattactcaatgaataaaaaaagtcaa-atttttctta 28630773  T
Q  261 taagtaggatcgga 274  Q
    ||| ||||| ||||    
T  28630772 taaataggaccgga 28630759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 158 - 246
Target Start/End: Complemental strand, 27909096 - 27909007
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaa-tgaatcaaaaaagt 246  Q
    |||||||||||||| |||||||  |||| |||||||||||||||||||| || | | ||||||||| |||||||| |||||| |||||||    
T  27909096 catttgacttttttaattcattgaataattgatgtatttgatctatattttagaccggatacatcaattactcaattgaatctaaaaagt 27909007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 263
Target Start/End: Complemental strand, 3065003 - 3064900
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttct 258  Q
    |||| |||||||||||||||| ||||| || |||||||| |||||||| ||||  |||||||| | |||  ||||||||| |||||| ||| ||||||||    
T  3065003 attttacttttttgattcattgcataaatggtgtatttggtctatattttatacaagatacattaattatacaatgaatctaaaaagataa-ttttttct 3064905  T
Q  259 tataa 263  Q
    |||||    
T  3064904 tataa 3064900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 17265748 - 17265827
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaat 237  Q
    |||||||||||||||||||||| ||||| ||| ||||||  ||||||||||| |  |||||||||| |||||| ||||||    
T  17265748 catttgacttttttgattcattgcataaatgacgtatttagtctatattctagacaagatacatcaattactcgatgaat 17265827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 233
Target Start/End: Complemental strand, 30627944 - 30627869
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaat 233  Q
    |||||||||||| ||||||||| ||||| ||||||||||| |||||||| || |  |||||||||| |||||||||    
T  30627944 catttgacttttctgattcattgcataaatgatgtatttggtctatattttagacaagatacatcaattactcaat 30627869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 30895305 - 30895252
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctata 211  Q
    |||||||||||||||||||||| ||||| |||| |||||| |||||||||||||    
T  30895305 catttgacttttttgattcattgcataaatgatatatttggtctatattctata 30895252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 158 - 246
Target Start/End: Complemental strand, 2972285 - 2972197
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagt 246  Q
    |||| ||| ||||||||||||| ||||| ||||||||||  |||||||| || || ||||||| || ||||||||| |||| |||||||    
T  2972285 cattagacgtttttgattcattgcataaatgatgtattttgtctatattttagataagatacaccaattactcaataaatctaaaaagt 2972197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 278
Target Start/End: Original strand, 2230382 - 2230495
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    ||||| ||||||| ||  |||| ||||||| ||| ||||||||||| |  |||||||| | |||||||||||||| ||||||| ||   |||||||||||    
T  2230382 actttattgattcgttgaataaatgatgtacttggtctatattctagacaagatacattaattactcaatgaatctaaaaagtcaa-agttttcttataa 2230480  T
Q  264 gtaggatcggaggga 278  Q
     ||||| ||||||||    
T  2230481 ataggaccggaggga 2230495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 9077706 - 9077656
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattcta 209  Q
    ||||||||||||||||||||| ||||| ||||| ||||| |||||||||||    
T  9077706 atttgacttttttgattcattgcataaatgatgcatttggtctatattcta 9077656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 275
Target Start/End: Original strand, 10283322 - 10283437
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcag-atacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    ||||||||||||||||||||   |||| ||||||||||||| |||||| || | ||| |||||||| ||||||||| |||  ||||| |||| ||||| |    
T  10283322 atttgacttttttgattcatggtataaatgatgtatttgatatatattttaga-cagtatacatcaattactcaataaatttaaaaaattaa-tttttgc 10283419  T
Q  258 ttataagtaggatcggag 275  Q
    |||||| ||||| |||||    
T  10283420 ttataaataggaccggag 10283437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 15467597 - 15467676
Alignment:
Q  159 atttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatc 238  Q
    |||||||||||| ||||||||  || | |||||||| ||||||||||| || |||| |||||||||| | | ||||||||    
T  15467597 atttgactttttagattcatttaattattgatgtatgtgatctatattataaatcacatacatcattaattgaatgaatc 15467676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 278
Target Start/End: Original strand, 8646712 - 8646824
Alignment:
Q  164 acttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttcttataa 263  Q
    ||||||||||||||||  |||  ||||| ||||| ||||| |||||  | || ||||||| ||| | ||| |||| |||||| |||||||| ||||||||    
T  8646712 acttttttgattcattgaatagttgatgcatttggtctat-ttctaagttaggtacatcaattattaaataaatctaaaaagataactttt-tcttataa 8646809  T
Q  264 gtaggatcggaggga 278  Q
     ||||||||||||||    
T  8646810 ataggatcggaggga 8646824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 246
Target Start/End: Original strand, 3673826 - 3673883
Alignment:
Q  189 atgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagt 246  Q
    |||||| ||||| ||||| ||||||| |||||||||||| | |||||||| |||||||    
T  3673826 atgtatgtgatccatattatatatcatatacatcatttattgaatgaatctaaaaagt 3673883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 3046734 - 3046686
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatatt 206  Q
    |||||||||||||| ||||||||| ||| |||||||| || ||||||||    
T  3046734 catttgacttttttaattcattacttaaatgatgtatgtggtctatatt 3046686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 278
Target Start/End: Original strand, 1560 - 1678
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    ||||||||||||||||||| || ||||| ||||| |||||||||||| |||| | |  |||||||| ||| |||||||||| ||||| |||| |||||||    
T  1560 catttgacttttttgattcgttgcataaatgatgcatttgatctatactctaga-ctaatacatcaattattcaatgaatctaaaaaattaa-ttttttc 1657  T
Q  258 ttataagtaggatcggaggga 278  Q
    |||||| || || ||||||||    
T  1658 ttataaataagaccggaggga 1678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 16678 - 16757
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaat 237  Q
    |||||||||||||||||||||| |||||   ||||||||| ||||||||||| |  |||||||||| |||||||||||||    
T  16678 catttgacttttttgattcattgcataaaatatgtatttggtctatattctagacaagatacatcaattactcaatgaat 16757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 160 - 255
Target Start/End: Complemental strand, 16648 - 16553
Alignment:
Q  160 tttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttt 255  Q
    ||||||||||||||||||||  |||| | ||||||||| |||||||||||    |||| ||||| ||||||||||||| ||||||||||| |||||    
T  16648 tttgacttttttgattcattgtataaataatgtatttggtctatattctagtcaagatgcatcaattactcaatgaattaaaaaagttaaattttt 16553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 244
Target Start/End: Complemental strand, 2609 - 2539
Alignment:
Q  174 ttcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaa 244  Q
    |||||| |||||  ||||||||||||||||||||||||||| |||||| | |||||||||||||| |||||    
T  2609 ttcattgcataaacgatgtatttgatctatattctatatcaaatacattaattactcaatgaatctaaaaa 2539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 159 - 263
Target Start/End: Complemental strand, 40266 - 40162
Alignment:
Q  159 atttgacttttttgattcattacataag-tgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    |||||| |||||| ||||||| |||||  ||||||||||| |||||||| |||||||||||||||| ||||  |||||||| ||| |||||| ||||| |    
T  40266 atttgatttttttaattcattccataaaatgatgtatttggtctatattttatatcagatacatcaattacataatgaatctaaagagttaa-tttttcc 40168  T
Q  258 ttataa 263  Q
    ||||||    
T  40167 ttataa 40162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 1557 - 1507
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattcta 209  Q
    |||||||||||||||||||||  ||||| |||||||||||||||||||||||    
T  1557 catttgacttttttgattcatg-cataaatgatgtatttgatctatattcta 1507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 269
Target Start/End: Original strand, 156795 - 156905
Alignment:
Q  158 catttgacttttttgattcattacataagtgatgtatttgatctatattctatatcagatacatcatttactcaatgaatcaaaaaagttaacttttttc 257  Q
    ||||| |||||||| ||||||| |||||  ||| |||||| ||||||||||||| ||  ||||| | |||||||||||| | ||||| |  | |||||||    
T  156795 catttaacttttttaattcattgcataaacgatatatttggtctatattctataccaagtacattaattactcaatgaaactaaaaaatcta-ttttttc 156893  T
Q  258 ttataagtagga 269  Q
    |||||| |||||    
T  156894 ttataaatagga 156905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 206
Target Start/End: Original strand, 28124 - 28164
Alignment:
Q  166 ttttttgattcattacataagtgatgtatttgatctatatt 206  Q
    |||| ||||||||| ||||| ||||||||||||||||||||    
T  28124 ttttgtgattcattgcataaatgatgtatttgatctatatt 28164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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