View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4795_low_6 (Length: 240)
Name: NF4795_low_6
Description: NF4795
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4795_low_6 |
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Alignment Details
Target: chr2 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 18 - 236
Target Start/End: Original strand, 15214917 - 15215134
Alignment:
| Q |
18 |
tcaagaacaacaattttgttccgaattcgggtaactcgttgtcaaggcctaggaacttggatgtttctgatggattggttgtggataatgattttggttt |
117 |
Q |
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| T |
15214917 |
tcaagaacaacaattttgttccgaattcgggtaactcgttgtcaaggcctaggaacttggatgtttctgatggattggttgtggataatgattttggttt |
15215016 |
T |
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| Q |
118 |
gcatgacctaactgtgaatgaattctccaatgatacttttatgtgatgaaaatagaggtggacttagttatattttgttcattgtgtatgcttccacata |
217 |
Q |
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| T |
15215017 |
gcatgatctaactgtgaatgaattctccaatgatacttttatgtgatgaaaatagaggtggacttagttatattttgttcattgtgtatgcttccacata |
15215116 |
T |
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| Q |
218 |
ttattataagaataatgta |
236 |
Q |
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| T |
15215117 |
tta-tataagaataatgta |
15215134 |
T |
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