View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4798-Insertion-9 (Length: 243)
Name: NF4798-Insertion-9
Description: NF4798
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4798-Insertion-9 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 8 - 243
Target Start/End: Complemental strand, 55694928 - 55694694
Alignment:
| Q |
8 |
caagtaactcatagggaacatgatcaaatcatacttcataattcatatgtcttatcttcaaataacttgatagatatttttgattgaagttctgctttaa |
107 |
Q |
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| T |
55694928 |
caagtaactcatagggaacatgatcaaaacatacttcataattcatatgtcttatattcaaataacttgatagatatttttgattgaagtgctgcttcta |
55694829 |
T |
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| Q |
108 |
ataacaataatacaatgtagtagaatcaattaannnnnnnaagagcaaattgattattgatcttttttggattatgaaaaataaacacagggaaagagat |
207 |
Q |
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| T |
55694828 |
gtaataaaaatacaatgtagtagaatcaatt-attttttcaagagcaaattgattattgatcttttttggattatgaaaaataaacacagggaaagagat |
55694730 |
T |
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| Q |
208 |
ctacactaatttgttgtttataatccattggactaa |
243 |
Q |
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| T |
55694729 |
ctacactaatttgttgtttataatccattggactaa |
55694694 |
T |
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