View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4798_high_6 (Length: 257)
Name: NF4798_high_6
Description: NF4798
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4798_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 14 - 238
Target Start/End: Complemental strand, 3668900 - 3668677
Alignment:
| Q |
14 |
ttttgtaaaaatagactctcaggccagaaatcccctcaaacaaaagtaaaacagccttcagggacctgatgttggcctaacttatattccttactaataa |
113 |
Q |
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| T |
3668900 |
ttttgtaaaaatagactttcaggccaaaaatcacctcaaacaaaagtaaaacagc-ttcagggacctgatgttggcctaacttatattccttactaataa |
3668802 |
T |
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| Q |
114 |
agtatcatatgtaaactataaatggaaaacaaacacctcattttgcgtccctatggacctgaaaatgaattattctaaaatcaaaagaacattaagtcat |
213 |
Q |
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||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |
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| T |
3668801 |
agtatcatatgtaaactataaatggaatacaaacacctcattctgcgtccctatggacctggaaatgaattattctaaaatcaaaagaacattaagtgat |
3668702 |
T |
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| Q |
214 |
atattttttagtcaaatgagttaaa |
238 |
Q |
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||||||||||||||||||||||||| |
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| T |
3668701 |
atattttttagtcaaatgagttaaa |
3668677 |
T |
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