View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4799_high_3 (Length: 354)
Name: NF4799_high_3
Description: NF4799
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4799_high_3 |
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Alignment Details
Target: chr4 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 87 - 349
Target Start/End: Original strand, 53053348 - 53053610
Alignment:
| Q |
87 |
gcataagctagctcaagatagtgccatattaactaactataaataactgtgttgcaaacaacaattgtagcaacaaaacagaacattcattagcaatgga |
186 |
Q |
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| T |
53053348 |
gcataagctagctcaagttagtgccatattaactaactataaataactgtgttgcaaacaacaattgtagcaacaaaacagaacattcattagcaatgga |
53053447 |
T |
|
| Q |
187 |
agctccaagctttgtcttcttgtcattgcttcttctcctcacagctactacaagctcagctcaactcactcgtggtttctataacaatgtatgccccaat |
286 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53053448 |
agctccaagctttgtcttcttgtcattgcttcttctcctcacagctactacaagctcagctcaactcactcgtggtttctataacaatgtatgccccaat |
53053547 |
T |
|
| Q |
287 |
gtcgaacaattggttcgttctgccgtgaatcagaagtttcaacaaacatttgtctctgctcct |
349 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
53053548 |
gtcgaacaattggttcgttctgccgtgaatcagaagtttcaacaaacatttgtcactgctcct |
53053610 |
T |
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