View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4800-Insertion-4 (Length: 652)

Name: NF4800-Insertion-4
Description: NF4800
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4800-Insertion-4
NF4800-Insertion-4
[»] chr5 (15 HSPs)
chr5 (8-652)||(37898881-37899527)
chr5 (150-363)||(12338803-12339016)
chr5 (182-363)||(19570933-19571112)
chr5 (179-291)||(11273681-11273792)
chr5 (181-297)||(17768598-17768713)
chr5 (181-359)||(20715723-20715900)
chr5 (230-315)||(107231-107315)
chr5 (182-291)||(18451061-18451169)
chr5 (182-238)||(24518958-24519014)
chr5 (186-290)||(25682104-25682207)
chr5 (182-237)||(16617447-16617502)
chr5 (255-295)||(24518183-24518223)
chr5 (184-291)||(24842909-24843015)
chr5 (182-236)||(16621469-16621523)
chr5 (281-363)||(22230880-22230962)
[»] chr3 (8 HSPs)
chr3 (230-363)||(25884265-25884398)
chr3 (182-356)||(14541073-14541247)
chr3 (187-295)||(10342957-10343064)
chr3 (182-296)||(2728447-2728560)
chr3 (185-269)||(33913400-33913483)
chr3 (33-176)||(25055889-25056029)
chr3 (198-293)||(25918102-25918195)
chr3 (181-227)||(14419353-14419399)
[»] chr8 (7 HSPs)
chr8 (182-325)||(26883407-26883550)
chr8 (181-290)||(32240403-32240511)
chr8 (183-278)||(13305627-13305721)
chr8 (182-269)||(26853586-26853672)
chr8 (181-291)||(23894194-23894303)
chr8 (239-291)||(28900183-28900235)
chr8 (181-235)||(12957567-12957621)
[»] chr2 (11 HSPs)
chr2 (221-359)||(18531714-18531852)
chr2 (183-361)||(25475142-25475319)
chr2 (182-307)||(35708953-35709078)
chr2 (182-306)||(41256208-41256332)
chr2 (8-177)||(25855296-25855463)
chr2 (180-297)||(31000553-31000670)
chr2 (183-290)||(28455128-28455234)
chr2 (10-87)||(24684111-24684188)
chr2 (181-234)||(24318744-24318797)
chr2 (122-177)||(24684025-24684078)
chr2 (8-84)||(28422393-28422469)
[»] chr7 (19 HSPs)
chr7 (182-295)||(2629646-2629759)
chr7 (181-363)||(21472910-21473090)
chr7 (180-291)||(21544678-21544788)
chr7 (182-290)||(18494555-18494662)
chr7 (186-360)||(20342103-20342277)
chr7 (182-297)||(7494441-7494555)
chr7 (182-287)||(14074444-14074547)
chr7 (182-287)||(14384472-14384575)
chr7 (9-177)||(3762881-3763045)
chr7 (286-363)||(316259-316337)
chr7 (198-284)||(316524-316610)
chr7 (181-363)||(7816442-7816623)
chr7 (198-295)||(7152071-7152167)
chr7 (198-290)||(9974209-9974299)
chr7 (230-294)||(20039775-20039843)
chr7 (230-294)||(20049939-20050007)
chr7 (181-295)||(7143526-7143639)
chr7 (180-278)||(7776349-7776446)
chr7 (187-295)||(9687085-9687192)
[»] scaffold0103 (1 HSPs)
scaffold0103 (184-363)||(36494-36672)
[»] chr1 (15 HSPs)
chr1 (188-295)||(30782872-30782979)
chr1 (182-295)||(27682881-27682993)
chr1 (182-295)||(50048198-50048310)
chr1 (222-363)||(12484825-12484965)
chr1 (182-297)||(23224574-23224688)
chr1 (224-363)||(24902650-24902787)
chr1 (181-267)||(34522100-34522185)
chr1 (184-291)||(30676624-30676729)
chr1 (108-177)||(32105711-32105778)
chr1 (184-248)||(17836791-17836854)
chr1 (182-226)||(21450918-21450962)
chr1 (181-278)||(9329213-9329309)
chr1 (181-222)||(12484509-12484550)
chr1 (252-363)||(12811288-12811399)
chr1 (27-87)||(25232269-25232329)
[»] chr4 (14 HSPs)
chr4 (214-307)||(9781921-9782014)
chr4 (195-297)||(51885833-51885934)
chr4 (182-291)||(22219901-22220009)
chr4 (176-295)||(10450292-10450410)
chr4 (181-359)||(12840697-12840875)
chr4 (181-250)||(20717936-20718004)
chr4 (182-359)||(47023552-47023733)
chr4 (199-295)||(24579961-24580056)
chr4 (182-267)||(12805768-12805852)
chr4 (8-87)||(13896693-13896772)
chr4 (181-223)||(15623941-15623983)
chr4 (185-291)||(27303909-27304014)
chr4 (187-228)||(5678677-5678718)
chr4 (187-295)||(13553462-13553569)
[»] chr6 (7 HSPs)
chr6 (181-359)||(15576081-15576254)
chr6 (184-296)||(25940161-25940267)
chr6 (181-363)||(13194170-13194342)
chr6 (195-291)||(8037001-8037095)
chr6 (182-237)||(13782414-13782469)
chr6 (182-237)||(13789736-13789791)
chr6 (182-237)||(13803991-13804046)
[»] scaffold0855 (1 HSPs)
scaffold0855 (188-363)||(2021-2195)
[»] scaffold0847 (1 HSPs)
scaffold0847 (188-363)||(2186-2360)
[»] scaffold0362 (1 HSPs)
scaffold0362 (184-363)||(9844-10021)
[»] scaffold0171 (1 HSPs)
scaffold0171 (182-268)||(7336-7421)
[»] scaffold0542 (1 HSPs)
scaffold0542 (8-87)||(1013-1092)


Alignment Details
Target: chr5 (Bit Score: 559; Significance: 0; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 559; E-Value: 0
Query Start/End: Original strand, 8 - 652
Target Start/End: Original strand, 37898881 - 37899527
Alignment:
Q  8 gtatctatgttccaggaccgtacaactcctaccgaatgatgattgtatttcagataactggattaccaacatctcatgtannnnnnncccaacaagaaca 107  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||    
T  37898881 gtatctatgttccaagaccgtacaactcctaccaaatgatgattgtatttcagataactggattaccaacatctcatgtatttttttcccaacaagaaca 37898980  T
Q  108 caaaccacccatattattgctcaaatatttctttggaatctaccatgagccccttcaact--ctgttggtggctcttgatggacgaaactggcaagtgca 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||    
T  37898981 caaaccacccatattattgctcaaatatttctttggaatctaccatgagccccttcaactatctgttggtggctcttcatggacgaaactggcaagtgca 37899080  T
Q  206 ccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagcaaaacttattttaaaagtgaaaagt 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  37899081 ccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacaaagattgtcgttcaactcaataattaacaaaacttattttaaaagtgaaaagt 37899180  T
Q  306 aataaaagataaatagaattgaaggattgaattatcctgctcaatgcaagattaggttcttggaggctcagctttatagaactgtttgcacctctcaaaa 405  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  37899181 aataaaagataaatagaattgcagggttgaattatcctgctcaatgcaagattaggttcttggaggctcagctttatagagctgtttgcacctctcaaaa 37899280  T
Q  406 ccgtctctgtctaaacccttaccactaagctagtacctgaagtgtatatggaaagctaattgagcatgcaagaagataggaaaaagctattaacttgtct 505  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||    
T  37899281 tcgtctctgtctaaacccttaccactaagctagtacctgaagtgtatatggaaacctaattgagcatgcaagaagatagaaaaaagctattaatttgtct 37899380  T
Q  506 gttagtagttattttatgacatgttaagttaaaataacttcattaaaggaaaaataaaatgcaaatacttaattgagcaacttaagttatatgtgacccc 605  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  37899381 gttagtagttattttatgacatgttaagttaaaataacttcattaaaggaaaaataaaatgcaaatacttaattgagcaacttaagttatatgtgacacc 37899480  T
Q  606 tatcatttgttcctttcaagtaagtgacgagaagtttttgtttttgt 652  Q
    || ||||||||||||||||||||||||||||||||||||||||||||    
T  37899481 taccatttgttcctttcaagtaagtgacgagaagtttttgtttttgt 37899527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 150 - 363
Target Start/End: Original strand, 12338803 - 12339016
Alignment:
Q  150 ccatgagccccttcaactctgttggtggctcttgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctct 249  Q
    |||||||||||||||| ||| ||| ||| |||||||||||||||||| ||||||||||||||||| | ||| ||||||| |  ||| | ||||||||||     
T  12338803 ccatgagccccttcaaatctattgttggttcttgatggacgaaactgacaagtgcaccaaatcgctaaaagcagtaaagtaagaagctatatcgttctcc 12338902  T
Q  250 acagagattgtcgttcaactcaataattagcaaaacttattttaaaagtgaaaagtaataaaagataaatagaattgaaggattgaattatcctgctcaa 349  Q
    |||| ||||| ||||||||| ||||||||| |||| |||||| || || ||||||||| |||  || |||||||||| ||| || ||||  ||||| ||     
T  12338903 acagggattgccgttcaacttaataattagtaaaatttatttcaagagcgaaaagtaaaaaataatgaatagaattgcagggttaaattgccctgcccag 12339002  T
Q  350 tgcaagattaggtt 363  Q
    ||||||||||||||    
T  12339003 tgcaagattaggtt 12339016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 182 - 363
Target Start/End: Complemental strand, 19571112 - 19570933
Alignment:
Q  182 tgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagca 281  Q
    |||||||| ||| | ||||||||||||||||| ||||| || ||||| |||||||| ||||||||||||||  ||||||| ||||||| | ||||||  |    
T  19571112 tgatggactaaatttgcaagtgcaccaaatcgtaacaaataataaagtagtaagtt-tatcgttctctacaaggattgtcattcaacttagtaattatta 19571014  T
Q  282 aaacttattttaaaagtgaaaagtaataaaagataaatagaattgaaggattgaattatcctgctcaatgcaagattaggtt 363  Q
    |||||||||| ||| | | ||||||||||||  | |||||||||| | | ||||||| || | |  ||||||||||||||||    
T  19571013 aaacttatttcaaaggcg-aaagtaataaaaagtgaatagaattgcaaggttgaattgtcattccgaatgcaagattaggtt 19570933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 179 - 291
Target Start/End: Original strand, 11273681 - 11273792
Alignment:
Q  179 tcttgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataatta 278  Q
    ||||||||||| ||| ||||||||||| ||||| | |||||||| ||||| |||||||| |||||||||| | |  ||||||||||||||| |  |||||    
T  11273681 tcttgatggacaaaattggcaagtgcatcaaattgtaacaagtaataaagtagtaagtt-tatcgttctcgatatggattgtcgttcaacttagcaatta 11273779  T
Q  279 gcaaaacttattt 291  Q
    |||||||||||||    
T  11273780 gcaaaacttattt 11273792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 181 - 297
Target Start/End: Complemental strand, 17768713 - 17768598
Alignment:
Q  181 ttgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagc 280  Q
    ||||||||||||| ||||||||  ||||||||| || ||||| ||||| |||||||| ||| |||||| |||| |||||||||||||||  | |||||      
T  17768713 ttgatggacgaaattggcaagtaaaccaaatcgtaagaagtaataaagtagtaagtt-tattgttctccacagggattgtcgttcaacttgagaattaat 17768615  T
Q  281 aaaacttattttaaaag 297  Q
     ||||||||||||||||    
T  17768614 gaaacttattttaaaag 17768598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 359
Target Start/End: Complemental strand, 20715900 - 20715723
Alignment:
Q  181 ttgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagc 280  Q
    ||||||||||||| || |||||||||||||| | || ||||| ||| | |||||||| ||||||||||  ||| |||||| |||||||| | ||||||      
T  20715900 ttgatggacgaaattgacaagtgcaccaaattgtaataagtaataaggtagtaagtt-tatcgttctccgcagggattgttgttcaacttagtaattaaa 20715802  T
Q  281 aaaacttattttaaaagtgaaaagt-aataaaagataaatagaattgaaggattgaattatcctgctcaatgcaagatta 359  Q
    ||||||| |||||||| |||||  | |||||||| | |||||||||| | | ||||| |  ||||| |||||||||||||    
T  20715801 aaaacttcttttaaaaatgaaatttaaataaaag-tgaatagaattgcatggttgaactgccctgcccaatgcaagatta 20715723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 230 - 315
Target Start/End: Complemental strand, 107315 - 107231
Alignment:
Q  230 agtaagttgtatcgttctctacagagattgtcgttcaactcaataattagcaaaacttattttaaaagtgaaaagtaataaaagat 315  Q
    |||||||||||||||| || ||||||| | ||| ||||||||| ||||||||||| |||||||||||  ||||| |||||||||||    
T  107315 agtaagttgtatcgttttccacagagactatcgctcaactcaagaattagcaaaatttattttaaaa-cgaaaaataataaaagat 107231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 18451061 - 18451169
Alignment:
Q  182 tgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagca 281  Q
    |||||||||||| ||||||||| |||| |||| |||||||| |||||  ||||||| |||||||||| |||  |||||| |||||||| |  |||||| |    
T  18451061 tgatggacgaaattggcaagtggaccagatcgtaacaagtaataaagttgtaagtt-tatcgttctccacaatgattgttgttcaacttagcaattagta 18451159  T
Q  282 aaacttattt 291  Q
    ||||||||||    
T  18451160 aaacttattt 18451169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 24519014 - 24518958
Alignment:
Q  182 tgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttg 238  Q
    |||||||||||||||||||||| | ||||||| |||||||| ||||| |||||||||    
T  24519014 tgatggacgaaactggcaagtgtatcaaatcgtaacaagtaataaagtagtaagttg 24518958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 290
Target Start/End: Complemental strand, 25682207 - 25682104
Alignment:
Q  186 ggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagcaaaac 285  Q
    |||||||| |||||||||||| |||||| |||||||| ||||  ||||| || |||||||||| ||   |||||| |||||||||  ||||||| |||||    
T  25682207 ggacgaaattggcaagtgcactaaatcgtaacaagtaataaaatagtaa-ttttatcgttctccacgtggattgtagttcaactcggtaattagaaaaac 25682109  T
Q  286 ttatt 290  Q
    |||||    
T  25682108 ttatt 25682104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 182 - 237
Target Start/End: Original strand, 16617447 - 16617502
Alignment:
Q  182 tgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagtt 237  Q
    ||||||||||||||| |||||||||||||||| ||| |||| ||||| ||||||||    
T  16617447 tgatggacgaaactgacaagtgcaccaaatcgtaactagtaataaagtagtaagtt 16617502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 255 - 295
Target Start/End: Complemental strand, 24518223 - 24518183
Alignment:
Q  255 gattgtcgttcaactcaataattagcaaaacttattttaaa 295  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  24518223 gattgtcgttcaactcgataattagcaaaacttattataaa 24518183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 291
Target Start/End: Complemental strand, 24843015 - 24842909
Alignment:
Q  184 atggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagcaaa 283  Q
    ||||||||||  |||||||  || |||||  |||||||| ||||| |||||||| ||| ||||||||||  |||||| |||||||| | ||||||  |||    
T  24843015 atggacgaaatgggcaagtttactaaatcataacaagtaataaagtagtaagtt-tatagttctctacaaggattgttgttcaacttagtaattaataaa 24842917  T
Q  284 acttattt 291  Q
    ||||||||    
T  24842916 acttattt 24842909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 16621469 - 16621523
Alignment:
Q  182 tgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagt 236  Q
    ||||||||||||||| |||||||||||||||| ||| |||| ||||  |||||||    
T  16621469 tgatggacgaaactgacaagtgcaccaaatcgtaactagtaataaaatagtaagt 16621523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 281 - 363
Target Start/End: Complemental strand, 22230962 - 22230880
Alignment:
Q  281 aaaacttattttaaaagtgaaaagtaataaaagataaatagaattgaaggattgaattatcctgctcaatgcaagattaggtt 363  Q
    ||||||||||| |||||  ||||||||  |||| | |||||||||| ||| |||||||   |||| |||||||||||||||||    
T  22230962 aaaacttatttcaaaaggaaaaagtaaataaaggtgaatagaattgcagggttgaattgctctgcccaatgcaagattaggtt 22230880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 2e-38; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 230 - 363
Target Start/End: Complemental strand, 25884398 - 25884265
Alignment:
Q  230 agtaagttgtatcgttctctacagagattgtcgttcaactcaataattagcaaaacttattttaaaagtgaaaagtaataaaagataaatagaattgaag 329  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||| |||| ||||| ||    
T  25884398 agtaagttgtatcgttctctaaagggattgtcgttcaactcaataattaacaaaacttattttaagagtgaaaagtgataaaagatgaataaaattgcag 25884299  T
Q  330 gattgaattatcctgctcaatgcaagattaggtt 363  Q
    | |||||||  ||| | |||||||||||||||||    
T  25884298 ggttgaatttccctacccaatgcaagattaggtt 25884265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 182 - 356
Target Start/End: Original strand, 14541073 - 14541247
Alignment:
Q  182 tgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagca 281  Q
    |||||||||||| |||||||| ||||||||   || ||||| ||||  ||||||||||||||||||| || |||||||||||||||||||||| |||| |    
T  14541073 tgatggacgaaattggcaagtacaccaaataataataagtaataaaatagtaagttgtatcgttctccactgagattgtcgttcaactcaatagttagta 14541172  T
Q  282 aaacttattttaaaagtgaaaagtaataaaagataaatagaattgaaggattgaattatcctgctcaatgcaaga 356  Q
    |||||||||||||||||||||| |||  |||||| |||||||||| ||  || |||| || ||| ||||||||||    
T  14541173 aaacttattttaaaagtgaaaattaaataaagattaatagaattgcagagttaaattgtcatgcccaatgcaaga 14541247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 187 - 295
Target Start/End: Complemental strand, 10343064 - 10342957
Alignment:
Q  187 gacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagcaaaact 286  Q
    ||||||| | |||||||||| |||||| ||| |||| ||||  |||||||| |||||||||| |||  ||||| ||||||||| |  |||||||||||||    
T  10343064 gacgaaattagcaagtgcacaaaatcgtaacgagtaataaaatagtaagtt-tatcgttctccacaaggattgccgttcaacttagcaattagcaaaact 10342966  T
Q  287 tattttaaa 295  Q
    |||||||||    
T  10342965 tattttaaa 10342957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 296
Target Start/End: Original strand, 2728447 - 2728560
Alignment:
Q  182 tgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagca 281  Q
    |||||||| |||  ||||| |||||||||||| |||||  |  |||| |||||||| |||||||||| |||  ||||||||||||||| | ||||||| |    
T  2728447 tgatggacaaaatgggcaaatgcaccaaatcgtaacaataaacaaagtagtaagtt-tatcgttctccacaaggattgtcgttcaacttagtaattagaa 2728545  T
Q  282 aaacttattttaaaa 296  Q
    ||| |||||||||||    
T  2728546 aaaattattttaaaa 2728560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 269
Target Start/End: Original strand, 33913400 - 33913483
Alignment:
Q  185 tggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaact 269  Q
    ||||||||| ||||||||||||||||| | |||||||| ||||| ||||| || |||||||||||| |  |||||||||| ||||    
T  33913400 tggacgaaattggcaagtgcaccaaattgtaacaagtaataaagtagtaaatt-tatcgttctctatatggattgtcgtttaact 33913483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 176
Target Start/End: Original strand, 25055889 - 25056029
Alignment:
Q  33 ctcctaccgaatgatgattgtatttcagataactggattaccaacatctcatgtannnnnnncccaacaagaacacaaaccacccatattattgctcaaa 132  Q
    |||||| | ||||||| |||||| ||   ||||||||||||||||||||||||||        | |||||| || |||| ||| ||||||| || |||||    
T  25055889 ctcctatcaaatgatgtttgtatctccactaactggattaccaacatctcatgtattttcttac-aacaagtacccaaatcacacatattagtggtcaaa 25055987  T
Q  133 tatttctttggaatctaccatgagccccttcaactctgttggtg 176  Q
    |||  ||||  | |||||||||||||||||| ||||||||||||    
T  25055988 tatgccttt--actctaccatgagccccttcgactctgttggtg 25056029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 293
Target Start/End: Original strand, 25918102 - 25918195
Alignment:
Q  198 caagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagcaaaacttatttta 293  Q
    |||||||||||||| | |||||||| ||| | |||||||| ||||||  || | || ||||||||||||||| |  ||||||||||||||||||||    
T  25918102 caagtgcaccaaattgtaacaagtaataacgtagtaagtt-tatcgtcttc-atagggattgtcgttcaacttagaaattagcaaaacttatttta 25918195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 181 - 227
Target Start/End: Complemental strand, 14419399 - 14419353
Alignment:
Q  181 ttgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaa 227  Q
    ||||| ||||||| ||||||||||||||||||| |||||||| ||||    
T  14419399 ttgatagacgaaattggcaagtgcaccaaatcgtaacaagtaataaa 14419353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 3e-37; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 182 - 325
Target Start/End: Complemental strand, 26883550 - 26883407
Alignment:
Q  182 tgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagca 281  Q
    |||||||| ||| ||||||||||||||||||  ||||| ||||||||  ||||||| |||||||||| | || |||||| |||||| |||||||||||||    
T  26883550 tgatggacaaaattggcaagtgcaccaaatcataacaaatagtaaagttgtaagttctatcgttctccaaagggattgttgttcaattcaataattagca 26883451  T
Q  282 aaacttattttaaaagtgaaaagtaataaaagataaatagaatt 325  Q
    ||| |||||||||||||||||||||||||| ||| |||||||||    
T  26883450 aaagttattttaaaagtgaaaagtaataaacgatgaatagaatt 26883407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 181 - 290
Target Start/End: Complemental strand, 32240511 - 32240403
Alignment:
Q  181 ttgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagc 280  Q
    ||||||||| ||| ||||||||||||||||| | |||||||| ||||| |||||||| |||||||||| | | ||||||| ||||||||||  ||||| |    
T  32240511 ttgatggacaaaattggcaagtgcaccaaattgtaacaagtaataaagtagtaagtt-tatcgttctccaaatagattgttgttcaactcagcaattatc 32240413  T
Q  281 aaaacttatt 290  Q
    ||||||||||    
T  32240412 aaaacttatt 32240403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 278
Target Start/End: Complemental strand, 13305721 - 13305627
Alignment:
Q  183 gatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataatta 278  Q
    ||||||||||| |||||||||| | |||| | |||||||| ||||| ||| |||| ||||||||||||||  ||||||||||||||| | ||||||    
T  13305721 gatggacgaaattggcaagtgcgcaaaattgtaacaagtaataaagtagttagtt-tatcgttctctacatggattgtcgttcaacttagtaatta 13305627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 182 - 269
Target Start/End: Complemental strand, 26853672 - 26853586
Alignment:
Q  182 tgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaact 269  Q
    ||||||| |||| ||| || |||||||||||| |||||||| ||||| ||||||||  ||||||||| |||| ||| |||||||||||    
T  26853672 tgatggatgaaattggaaaatgcaccaaatcgtaacaagtaataaagtagtaagtt-catcgttctccacagggatagtcgttcaact 26853586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 291
Target Start/End: Complemental strand, 23894303 - 23894194
Alignment:
Q  181 ttgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagc 280  Q
    ||||| ||||||| || |||||||||||||| | || || || ||| | | |||||| |||||||||||| || ||||||||||||||| |  ||||||     
T  23894303 ttgatagacgaaattgacaagtgcaccaaattgtaaaaaatattaaggtattaagtt-tatcgttctctatagggattgtcgttcaacttagcaattagt 23894205  T
Q  281 aaaacttattt 291  Q
    |||||||||||    
T  23894204 aaaacttattt 23894194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 291
Target Start/End: Original strand, 28900183 - 28900235
Alignment:
Q  239 tatcgttctctacagagattgtcgttcaactcaataattagcaaaacttattt 291  Q
    |||||||||  |||||||||||||||||||| | |||||| ||||||||||||    
T  28900183 tatcgttcttcacagagattgtcgttcaacttagtaattaacaaaacttattt 28900235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 12957621 - 12957567
Alignment:
Q  181 ttgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaag 235  Q
    ||||||||||||| || ||||||||| |||||| |||||||| ||||| ||||||    
T  12957621 ttgatggacgaaattgacaagtgcactaaatcgtaacaagtaataaagtagtaag 12957567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 1e-36; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 221 - 359
Target Start/End: Original strand, 18531714 - 18531852
Alignment:
Q  221 tagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagcaaaacttattttaaaagtgaaaagtaataaaagataaata 320  Q
    |||||||| ||||  ||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||    
T  18531714 tagtaaagtagtatattgtatcattctccacagggattgtcgttcaactcaataattagcaaaacttattttaaaagtgagaagtaatagaagatgaata 18531813  T
Q  321 gaattgaaggattgaattatcctgctcaatgcaagatta 359  Q
    |||||| | | |||||||  | |||||||||||||||||    
T  18531814 gaattgtatggttgaattgccatgctcaatgcaagatta 18531852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 183 - 361
Target Start/End: Complemental strand, 25475319 - 25475142
Alignment:
Q  183 gatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagcaa 282  Q
    |||||| |||| ||||||||||||||||    |||||| ||||||| |||||||||||||||| || | || |||||||||  |||||||||||||||||    
T  25475319 gatggaagaaattggcaagtgcaccaaaatataacaagcagtaaagtagtaagttgtatcgttttccatagggattgtcgtaaaactcaataattagcaa 25475220  T
Q  283 aacttattttaaaagtgaaaagtaataaaagataaatagaattgaaggattgaattatcctgctcaatgcaagattagg 361  Q
    ||||||||||| ||| |||||||| |||||| | |||||||||| ||| || ||||  | ||| |||||||| ||||||    
T  25475219 aacttattttataagcgaaaagtattaaaag-tgaatagaattgcagggttaaattgccttgcccaatgcaaaattagg 25475142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 182 - 307
Target Start/End: Complemental strand, 35709078 - 35708953
Alignment:
Q  182 tgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagca 281  Q
    |||||||||||| ||  ||||||||||||||| | |||| ||||||| || ||||||||||||| || |||| | ||||||||||||||||||||||  |    
T  35709078 tgatggacgaaattgttaagtgcaccaaatcgaagcaagcagtaaagtagcaagttgtatcgttttccacagggtttgtcgttcaactcaataattaaaa 35708979  T
Q  282 aaacttattttaaaagtgaaaagtaa 307  Q
    |||||||||| ||||| |||||||||    
T  35708978 aaacttatttcaaaagagaaaagtaa 35708953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 182 - 306
Target Start/End: Original strand, 41256208 - 41256332
Alignment:
Q  182 tgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaag-aagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagc 280  Q
    |||||||||||| || |||||||||||||||| ||||| || ||||| ||||||||| |||||||||| |||  ||||||||||||||| |||||||||     
T  41256208 tgatggacgaaattgacaagtgcaccaaatcgtaacaaataataaagtaagtaagtt-tatcgttctccacatggattgtcgttcaacttaataattagt 41256306  T
Q  281 aaaacttattttaaaagtgaaaagta 306  Q
    ||||||||||| |||||  |||||||    
T  41256307 aaaacttatttcaaaagctaaaagta 41256332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 177
Target Start/End: Original strand, 25855296 - 25855463
Alignment:
Q  8 gtatctatgttccaggaccgtacaactcctaccgaatgatgattgtatttcagataactggattaccaacatctcatgtannnnnnncccaacaagaaca 107  Q
    |||||||||||||| | | |||||||||| ||| ||||||| |||||| ||  |||||||||||||||||||||||||||       ||||||||| ||     
T  25855296 gtatctatgttccaaggcagtacaactccaaccaaatgatgtttgtatctcccataactggattaccaacatctcatgtacttatttcccaacaagtacc 25855395  T
Q  108 caaaccacccatattattgctcaaatatttctttggaatctaccatgagccccttcaactctgttggtgg 177  Q
    |||| ||||||   ||  |||||||||||||||   | |||  ||||| |||||||||||||||||||||    
T  25855396 caaatcacccactctagcgctcaaatatttctt--cactctgtcatgatccccttcaactctgttggtgg 25855463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 180 - 297
Target Start/End: Complemental strand, 31000670 - 31000553
Alignment:
Q  180 cttgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaat-aatta 278  Q
    |||||||||||||| | ||||||||| ||||| | |||||||| ||||| |||||||| |||| ||||| |||| ||||||||||||||| | | |||||    
T  31000670 cttgatggacgaaatttgcaagtgcatcaaattgtaacaagtaataaagtagtaagtt-tatcattctccacagggattgtcgttcaacttagtaaatta 31000572  T
Q  279 gcaaaacttattttaaaag 297  Q
      ||||||||||| |||||    
T  31000571 ataaaacttatttcaaaag 31000553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 290
Target Start/End: Original strand, 28455128 - 28455234
Alignment:
Q  183 gatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagcaa 282  Q
    ||||||||||| |||||||| |||||||||  |||||||| ||||| |||||||| ||| |||||| |||  |||||| |||||||||  ||||||  ||    
T  28455128 gatggacgaaattggcaagtacaccaaatcataacaagtattaaagtagtaagtt-tatggttctccacatggattgttgttcaactcgttaattaataa 28455226  T
Q  283 aacttatt 290  Q
    ||||||||    
T  28455227 aacttatt 28455234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 24684188 - 24684111
Alignment:
Q  10 atctatgttccaggaccgtacaactcctaccgaatgatgattgtatttcagataactggattaccaacatctcatgta 87  Q
    |||| ||||||| ||| ||||||||| |||| |||||||||||||| ||   ||| ||||||||||||||||||||||    
T  24684188 atctttgttccaagacagtacaactcataccaaatgatgattgtatctccattaattggattaccaacatctcatgta 24684111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 24318744 - 24318797
Alignment:
Q  181 ttgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaa 234  Q
    ||||||||||||| ||| ||||||||||||| | ||||| || |||||||||||    
T  24318744 ttgatggacgaaattggaaagtgcaccaaattgtaacaattaataaagaagtaa 24318797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 122 - 177
Target Start/End: Complemental strand, 24684078 - 24684025
Alignment:
Q  122 tattgctcaaatatttctttggaatctaccatgagccccttcaactctgttggtgg 177  Q
    |||||||||||||||||||   ||| |||||||||||||||||||| |||| ||||    
T  24684078 tattgctcaaatatttcttc--aatttaccatgagccccttcaactttgtttgtgg 24684025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 28422393 - 28422469
Alignment:
Q  8 gtatctatgttccaggaccgtacaactcctaccgaatgatgattgtatttcagataactggattaccaacatctcat 84  Q
    ||||||||||| || |||||||  ||||||||| |||||||||||||| ||    || |||||| ||||||||||||    
T  28422393 gtatctatgtttcaagaccgtaacactcctaccaaatgatgattgtatctctccaaattggattgccaacatctcat 28422469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 1e-33; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 182 - 295
Target Start/End: Original strand, 2629646 - 2629759
Alignment:
Q  182 tgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagca 281  Q
    |||| ||||||| || |||||||| ||||| |||| ||||||||||| ||||||||||||||||||| |||| |||||| ||||||||||||||||||||    
T  2629646 tgattgacgaaattgacaagtgcaacaaattgcaataagtagtaaagtagtaagttgtatcgttctccacagggattgttgttcaactcaataattagca 2629745  T
Q  282 aaacttattttaaa 295  Q
    ||||||||||||||    
T  2629746 aaacttattttaaa 2629759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 181 - 363
Target Start/End: Complemental strand, 21473090 - 21472910
Alignment:
Q  181 ttgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagc 280  Q
    ||||||||||||| |  |||||||||||||||  |||||||  ||||| |||||||| | || ||||| ||| |||||||||||||||| | ||||||      
T  21473090 ttgatggacgaaattatcaagtgcaccaaatcataacaagttataaagtagtaagtt-tctcattctccacaaagattgtcgttcaacttagtaattaat 21472992  T
Q  281 aaaacttattttaaaagtgaaaagtaataaaagataaatagaattgaaggattgaattatcctgctcaatgcaagattaggtt 363  Q
    ||||||||||| ||||| | |||||||  ||| || |||||||||| ||  |||||||  ||||| |||||||||||||||||    
T  21472991 aaaacttatttcaaaagcg-aaagtaaataaaaatgaatagaattgcagagttgaattgccctgcccaatgcaagattaggtt 21472910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 180 - 291
Target Start/End: Original strand, 21544678 - 21544788
Alignment:
Q  180 cttgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattag 279  Q
    |||||||||||||| ||||||||||||||||||| |||||||| ||||| |||||||| || ||||||| |||  ||||||| ||||||| |  ||||||    
T  21544678 cttgatggacgaaattggcaagtgcaccaaatcgtaacaagtaataaagtagtaagtt-taccgttctccacatggattgtcattcaacttagaaattag 21544776  T
Q  280 caaaacttattt 291  Q
     |||||||||||    
T  21544777 taaaacttattt 21544788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 182 - 290
Target Start/End: Original strand, 18494555 - 18494662
Alignment:
Q  182 tgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagca 281  Q
    |||| ||||||| ||||||||||||||||||| |||||||| ||| | |||||||| ||| |||||| |||| ||||||||||||||||  ||||||| |    
T  18494555 tgatagacgaaattggcaagtgcaccaaatcgtaacaagtaataaggtagtaagtt-tattgttctccacagggattgtcgttcaactcggtaattagaa 18494653  T
Q  282 aaacttatt 290  Q
    ||| |||||    
T  18494654 aaaattatt 18494662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 186 - 360
Target Start/End: Complemental strand, 20342277 - 20342103
Alignment:
Q  186 ggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagcaaaac 285  Q
    |||||||| |||||| |||||| ||||| |||||||| ||||| | |||||| |||| ||||||| || ||||||||||||||| | ||||||  |||||    
T  20342277 ggacgaaattggcaaatgcaccgaatcgtaacaagtaataaagcaataagtt-tatcattctctagagggattgtcgttcaacttagtaattaataaaac 20342179  T
Q  286 ttatttt--aaaagtgaaaagtaataaaagataaatagaattgaaggattgaattatcctgctcaatgcaagattag 360  Q
    ||||| |  ||||| ||||   |||||||| | |||||||||| ||| |||||||   |||| ||||||||||||||    
T  20342178 ttattatcaaaaagcgaaagtaaataaaag-tgaatagaattgcagggttgaattgctctgcccaatgcaagattag 20342103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 297
Target Start/End: Complemental strand, 7494555 - 7494441
Alignment:
Q  182 tgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagca 281  Q
    |||||||||||| ||||||||||||||||||| |||||||| ||||  |||||||| |||| ||||| |||| ||||  ||||||||| | |||| |  |    
T  7494555 tgatggacgaaattggcaagtgcaccaaatcgtaacaagtaataaattagtaagtt-tatcattctccacagggattaccgttcaacttagtaatcatta 7494457  T
Q  282 aaacttattttaaaag 297  Q
    |||||||||| |||||    
T  7494456 aaacttatttcaaaag 7494441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 287
Target Start/End: Complemental strand, 14074547 - 14074444
Alignment:
Q  182 tgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagca 281  Q
    |||||||||||||||| |||||||| |||||| |||||||| ||||| |||||||| ||||| |||  |||  ||||||| ||||||||  |||||||||    
T  14074547 tgatggacgaaactggaaagtgcacaaaatcgtaacaagtaataaagtagtaagtt-tatcg-tcttcacatggattgtcattcaactcggtaattagca 14074450  T
Q  282 aaactt 287  Q
    ||||||    
T  14074449 aaactt 14074444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 287
Target Start/End: Complemental strand, 14384575 - 14384472
Alignment:
Q  182 tgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagca 281  Q
    |||||||||||||||| |||||||| |||||| |||||||| ||||| |||||||| ||||| |||  |||  ||||||| ||||||||  |||||||||    
T  14384575 tgatggacgaaactggaaagtgcacaaaatcgtaacaagtaataaagtagtaagtt-tatcg-tcttcacatggattgtcattcaactcggtaattagca 14384478  T
Q  282 aaactt 287  Q
    ||||||    
T  14384477 aaactt 14384472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 177
Target Start/End: Complemental strand, 3763045 - 3762881
Alignment:
Q  9 tatctatgttccaggaccgtacaactcctaccgaatgatgattgtatttcagataactggattaccaacatctcatgtannnnnnncccaacaagaacac 108  Q
    ||||||||||||| ||  |||||||||||||  |||||||| |||||  ||| |||||||||||||||||||| |||||       ||||||||| || |    
T  3763045 tatctatgttccaagatagtacaactcctactaaatgatgaatgtatcccagttaactggattaccaacatcttatgta-ttttatcccaacaagtac-c 3762948  T
Q  109 aaaccacccatattattgctcaaatatttctttggaatctaccatgagccccttcaactctgttggtgg 177  Q
    ||  || ||| | || ||||||||||||||||   || ||||||||||||||| ||||| |||||||||    
T  3762947 aagtcatccacactagtgctcaaatatttctt--caacctaccatgagcccctacaactgtgttggtgg 3762881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 363
Target Start/End: Complemental strand, 316337 - 316259
Alignment:
Q  286 ttattttaaaagtgaaaagtaa-taaaagataaatagaattgaaggattgaattatcctgctcaatgcaagattaggtt 363  Q
    |||||||||||||||||||||| |||||||| |||||||||| | | |||||||  ||| | |||||||||||||||||    
T  316337 ttattttaaaagtgaaaagtaaataaaagattaatagaattgcatggttgaattcccctacccaatgcaagattaggtt 316259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 198 - 284
Target Start/End: Complemental strand, 316610 - 316524
Alignment:
Q  198 caagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagcaaaa 284  Q
    |||||| || ||||||||||||||||||||  |||||||| || ||||||| ||||  ||||  |||||||||||||||||| ||||    
T  316610 caagtgtactaaatcgcaacaagtagtaaattagtaagttctaccgttctccacaggaattgatgttcaactcaataattagtaaaa 316524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 363
Target Start/End: Complemental strand, 7816623 - 7816442
Alignment:
Q  181 ttgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagc 280  Q
    ||||||||||||| || |||||||| || || | |||||||| ||||| | || ||| |||  || || |||  |||||| |||||||| | ||||||      
T  7816623 ttgatggacgaaattgacaagtgcatcatattgtaacaagtactaaagtaatatgtt-tatatttttccacaaggattgttgttcaacttagtaattaat 7816525  T
Q  281 aaaacttattttaaaagtgaaaagtaataaaagataaatagaattgaaggattgaattatcctgctcaatgcaagattaggtt 363  Q
    ||||||||||| ||||    ||||||||||||  | |||||||||||||| ||||||||  |||| |||||||| ||||||||    
T  7816524 aaaacttatttcaaaaagcgaaagtaataaaaagtgaatagaattgaagggttgaattactctgcccaatgcaaaattaggtt 7816442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 198 - 295
Target Start/End: Complemental strand, 7152167 - 7152071
Alignment:
Q  198 caagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagcaaaacttattttaaa 295  Q
    |||||||||||||||| |||||||| ||||| |||||||| ||||||| |  | || ||||||| ||||||| | ||||||  |||||||||||||||    
T  7152167 caagtgcaccaaatcgtaacaagtaataaagtagtaagtt-tatcgtttttcagagggattgtcattcaacttagtaattaataaaacttattttaaa 7152071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 290
Target Start/End: Complemental strand, 9974299 - 9974209
Alignment:
Q  198 caagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagcaaaacttatt 290  Q
    |||||||||||||| | |||| ||| ||||| |||||||| ||||||| |||||||  |||||||||||||||  ||| ||||||||||||||    
T  9974299 caagtgcaccaaatggtaacatgtaataaagtagtaagtt-tatcgtt-tctacaggaattgtcgttcaactctgtaactagcaaaacttatt 9974209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 230 - 294
Target Start/End: Original strand, 20039775 - 20039843
Alignment:
Q  230 agtaagttgtatcgttctctacagagattgtcgttcaactca----ataattagcaaaacttattttaa 294  Q
    ||||||||||||||||||  ||| ||||||||||||||||||    |||||| ||||||||||||||||    
T  20039775 agtaagttgtatcgttcttcacaaagattgtcgttcaactcaatatataatttgcaaaacttattttaa 20039843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 230 - 294
Target Start/End: Original strand, 20049939 - 20050007
Alignment:
Q  230 agtaagttgtatcgttctctacagagattgtcgttcaactca----ataattagcaaaacttattttaa 294  Q
    ||||||||||||||||||  ||| ||||||||||||||||||    |||||| ||||||||||||||||    
T  20049939 agtaagttgtatcgttcttcacaaagattgtcgttcaactcaatatataatttgcaaaacttattttaa 20050007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 295
Target Start/End: Complemental strand, 7143639 - 7143526
Alignment:
Q  181 ttgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagc 280  Q
    |||||||| |||| || |||||||||||||||| |||||||| ||||| || ||||| |||||||||  | ||  |||||| ||||  ||| ||||||      
T  7143639 ttgatggatgaaattgacaagtgcaccaaatcgtaacaagtaataaagtagcaagtt-tatcgttcttcagaggaattgtcattcacttcagtaattaat 7143541  T
Q  281 aaaacttattttaaa 295  Q
    |||||||||||||||    
T  7143540 aaaacttattttaaa 7143526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 278
Target Start/End: Original strand, 7776349 - 7776446
Alignment:
Q  180 cttgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataatta 278  Q
    ||||||| || ||| | ||||||||||||||||  ||||||||  |||| |||||||| |||||||||| |||| || |||||||||||| | ||||||    
T  7776349 cttgatgaacaaaattagcaagtgcaccaaatcttaacaagtaacaaagtagtaagtt-tatcgttctccacagggactgtcgttcaacttagtaatta 7776446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 187 - 295
Target Start/End: Original strand, 9687085 - 9687192
Alignment:
Q  187 gacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagcaaaact 286  Q
    ||||||| || |||||| | ||||||| || ||||| ||||| |||||||| ||||||||   ||| | |||||||||||||| | || |||  ||||||    
T  9687085 gacgaaattgacaagtgtatcaaatcgtaataagtaataaagtagtaagtt-tatcgttccacacaaaaattgtcgttcaacttagtatttaataaaact 9687183  T
Q  287 tattttaaa 295  Q
    |||||||||    
T  9687184 tattttaaa 9687192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 184 - 363
Target Start/End: Original strand, 36494 - 36672
Alignment:
Q  184 atggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagcaaa 283  Q
    |||||||||| |||||||||||||||||| ||||||||| ||||| |||||||| ||| |||||| |||  ||||||||||||||| ||||||||  |||    
T  36494 atggacgaaattggcaagtgcaccaaatcacaacaagtaataaagtagtaagtt-tattgttctccacaaggattgtcgttcaacttaataattaataaa 36592  T
Q  284 acttattttaaaagtgaaaagtaataaaagataaatagaattgaaggattgaattatcctgctcaatgcaagattaggtt 363  Q
    ||||||||||||||   ||||| || |||  | |||||||||| ||| |||||||  | ||| |||||||||||||||||    
T  36593 acttattttaaaagacgaaagtcattaaaagtgaatagaattgcagggttgaatttccttgcccaatgcaagattaggtt 36672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 3e-25; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 30782979 - 30782872
Alignment:
Q  188 acgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagcaaaactt 287  Q
    |||||| ||| |||| ||||||||||||| || || ||||| ||||||||||||||||||  |||||||||| ||||||||| |||||||| ||||||||    
T  30782979 acgaaattggtaagtacaccaaatcgcaataaataataaagtagtaagttgtatcgttctacacagagattgccgttcaacttaataattaacaaaactt 30782880  T
Q  288 attttaaa 295  Q
    ||||||||    
T  30782879 attttaaa 30782872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 182 - 295
Target Start/End: Complemental strand, 27682993 - 27682881
Alignment:
Q  182 tgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagca 281  Q
    |||||||||||| || ||||||||||||| || |||||||| ||||| |||||||| ||| ||||||||||| ||||||||||||||| |   |||||||    
T  27682993 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtt-tattgttctctacagggattgtcgttcaacttagctattagca 27682895  T
Q  282 aaacttattttaaa 295  Q
    ||||||||||||||    
T  27682894 aaacttattttaaa 27682881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 182 - 295
Target Start/End: Complemental strand, 50048310 - 50048198
Alignment:
Q  182 tgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagca 281  Q
    |||||||||||| ||||||||||| |||||   |||||||| ||||| |||||||| |||||||||| |||| || |||||||||||| || || |||||    
T  50048310 tgatggacgaaattggcaagtgcatcaaattataacaagtaataaagtagtaagtt-tatcgttctccacagggactgtcgttcaacttaacaactagca 50048212  T
Q  282 aaacttattttaaa 295  Q
    ||||||||||||||    
T  50048211 aaacttattttaaa 50048198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 222 - 363
Target Start/End: Original strand, 12484825 - 12484965
Alignment:
Q  222 agtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagcaaaacttattttaaaagtgaaaagtaataaaagataaatag 321  Q
    ||||||| |||||||  ||||||||||||||  ||||||||||||||||||||||||| ||||||||||| ||||| | |||||||| |||  | |||||    
T  12484825 agtaaagtagtaagtattatcgttctctacatggattgtcgttcaactcaataattagtaaaacttatttcaaaagcg-aaagtaattaaaagtgaatag 12484923  T
Q  322 aattgaaggattgaattatcctgctcaatgcaagattaggtt 363  Q
    ||||| | | || ||||  ||| | ||||||| |||||||||    
T  12484924 aattgcaaggttaaattgccctacacaatgcacgattaggtt 12484965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 182 - 297
Target Start/End: Complemental strand, 23224688 - 23224574
Alignment:
Q  182 tgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagca 281  Q
    |||||| ||||| ||||||||||  ||||||| |||||||| ||| | |||||||| |||| ||||| |||  ||||||||||||||| |  |||||| |    
T  23224688 tgatgggcgaaattggcaagtgcgtcaaatcgtaacaagtaataaggtagtaagtt-tatcattctccacatggattgtcgttcaacttagcaattagaa 23224590  T
Q  282 aaacttattttaaaag 297  Q
    |||||||| |||||||    
T  23224589 aaacttatgttaaaag 23224574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 224 - 363
Target Start/End: Original strand, 24902650 - 24902787
Alignment:
Q  224 taaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagcaaaacttattttaaaagtgaaaagtaataaaagataaatagaa 323  Q
    ||||| |||||||| ||||||||||  |||  |||||||||||||| ||||||||  ||||||||||| ||||| | |||||||  |||| | |||| ||    
T  24902650 taaagtagtaagtt-tatcgttctccgcaggtattgtcgttcaacttaataattaataaaacttatttcaaaagcg-aaagtaaataaaggtgaataaaa 24902747  T
Q  324 ttgaaggattgaattatcctgctcaatgcaagattaggtt 363  Q
    ||| ||| ||||||| || ||| |||||||| ||||||||    
T  24902748 ttgcagggttgaattgtcatgcccaatgcaatattaggtt 24902787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 267
Target Start/End: Complemental strand, 34522185 - 34522100
Alignment:
Q  181 ttgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaa 267  Q
    |||||||| |||| ||||||||||||||||||| |||||||| ||||  |||||||| |||||||||| |||  |||||| ||||||    
T  34522185 ttgatggaagaaattggcaagtgcaccaaatcgtaacaagtaataaaatagtaagtt-tatcgttctccacaaggattgttgttcaa 34522100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 184 - 291
Target Start/End: Complemental strand, 30676729 - 30676624
Alignment:
Q  184 atggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagcaaa 283  Q
    |||||||||  || ||||| |||||||||| |||||||| ||||| ||||| || |||||||||  | || ||||||||||||||| |  ||||||||||    
T  30676729 atggacgaacttgacaagttcaccaaatcgtaacaagtaataaagtagtaaatt-tatcgttctgcatag-gattgtcgttcaacttagcaattagcaaa 30676632  T
Q  284 acttattt 291  Q
    ||||||||    
T  30676631 acttattt 30676624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 177
Target Start/End: Original strand, 32105711 - 32105778
Alignment:
Q  108 caaaccacccatattattgctcaaatatttctttggaatctaccatgagccccttcaactctgttggtgg 177  Q
    |||| |||||| |||||||||| |||||||||||  | | || |||||||||||||||||||||||||||    
T  32105711 caaatcacccacattattgctcgaatatttcttt--attatagcatgagccccttcaactctgttggtgg 32105778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 17836791 - 17836854
Alignment:
Q  184 atggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctc 248  Q
    |||||||||| ||||||||||||||||||  ||||||||  |||| |||||||| ||||||||||    
T  17836791 atggacgaaattggcaagtgcaccaaatcataacaagtaagaaagtagtaagtt-tatcgttctc 17836854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 21450918 - 21450962
Alignment:
Q  182 tgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaa 226  Q
    |||||||| ||| |||| |||||||||||||||||||||||||||    
T  21450918 tgatggaccaaattggctagtgcaccaaatcgcaacaagtagtaa 21450962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 278
Target Start/End: Complemental strand, 9329309 - 9329213
Alignment:
Q  181 ttgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataatta 278  Q
    ||||||||||||| |||  ||| ||| |||| | |||||||| ||||| |||| ||| |||||||||| |||  ||||||||||||||| || |||||    
T  9329309 ttgatggacgaaattggagagtacactaaattgtaacaagtattaaagtagtacgtt-tatcgttctccacacggattgtcgttcaactaaacaatta 9329213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 12484509 - 12484550
Alignment:
Q  181 ttgatggacgaaactggcaagtgcaccaaatcgcaacaagta 222  Q
    ||||||||||||| || ||||||||||||||||||| |||||    
T  12484509 ttgatggacgaaattgacaagtgcaccaaatcgcaataagta 12484550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 252 - 363
Target Start/End: Complemental strand, 12811399 - 12811288
Alignment:
Q  252 agagattgtcgttcaactcaataattagcaaaacttattttaaaagtgaaaagtaataaaagata-aatagaattgaaggattgaattatcctgctcaat 350  Q
    |||||||||||||||||| | |||||| | ||| |||||||||| |  |||||||| | || ||  |||||||||| ||| |||||||   |||| ||||    
T  12811399 agagattgtcgttcaacttagtaatta-ctaaatttattttaaaggataaaagtaaaataaaattgaatagaattgcagggttgaattgcactgcccaat 12811301  T
Q  351 gcaagattaggtt 363  Q
    |||||||||||||    
T  12811300 gcaagattaggtt 12811288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 25232329 - 25232269
Alignment:
Q  27 gtacaactcctaccgaatgatgattgtatttcagataactggattaccaacatctcatgta 87  Q
    ||||||||||| || ||||||| |||||| |||| ||||| ||| |||||||| |||||||    
T  25232329 gtacaactcctcccaaatgatgtttgtatctcagttaactagatcaccaacatatcatgta 25232269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 5e-24; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 214 - 307
Target Start/End: Original strand, 9781921 - 9782014
Alignment:
Q  214 caacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagcaaaacttattttaaaagtgaaaagtaa 307  Q
    ||||||||| ||||| |||||||  |||||||||| | ||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||    
T  9781921 caacaagtaataaagtagtaagtgatatcgttctccatagagattgttgttcaactcaataattagtaaaacttatttcaaaagtgaaaagtaa 9782014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 195 - 297
Target Start/End: Complemental strand, 51885934 - 51885833
Alignment:
Q  195 tggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagcaaaacttattttaa 294  Q
    ||||||||||||| ||||| | |||||| ||||| |||||||| ||| |||||| |||| ||||||||||||||| ||||||||  ||||||||||| ||    
T  51885934 tggcaagtgcaccgaatcgtatcaagtaataaagtagtaagtt-tattgttctccacagggattgtcgttcaacttaataattaataaaacttatttcaa 51885836  T
Q  295 aag 297  Q
    |||    
T  51885835 aag 51885833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 22220009 - 22219901
Alignment:
Q  182 tgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagca 281  Q
    |||||||||||| || ||||||||| |||||  |||||||| ||||| |||||||| ||||||||||  || |||||||||||||||| | ||||||  |    
T  22220009 tgatggacgaaattgacaagtgcactaaatcataacaagtaataaagtagtaagtt-tatcgttctccgcaaagattgtcgttcaacttagtaattaata 22219911  T
Q  282 aaacttattt 291  Q
    ||||||||||    
T  22219910 aaacttattt 22219901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 176 - 295
Target Start/End: Original strand, 10450292 - 10450410
Alignment:
Q  176 ggctcttgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataa 275  Q
    |||| ||| |||| |||| ||||||||||||||||||| ||||| || ||||| |||||||| || ||||||||||||  | |||||||||||| | |||    
T  10450292 ggctattgttggatgaaattggcaagtgcaccaaatcgtaacaaataataaagtagtaagtt-tagcgttctctacaggaaatgtcgttcaacttagtaa 10450390  T
Q  276 ttagcaaaacttattttaaa 295  Q
     ||  |||||||||||||||    
T  10450391 ataataaaacttattttaaa 10450410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 181 - 359
Target Start/End: Original strand, 12840697 - 12840875
Alignment:
Q  181 ttgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagc 280  Q
    ||||||||||||| ||||||||||||  ||||| |||||||| ||||| |||||||| |||||||| | |||   ||| | |||||||| | ||||||      
T  12840697 ttgatggacgaaattggcaagtgcactgaatcgtaacaagtattaaagtagtaagtt-tatcgttcgccacatgcattctagttcaacttagtaattaat 12840795  T
Q  281 aaaacttattttaaaagtgaaaag--taataaaagataaatagaattgaaggattgaattatcctgctcaatgcaagatta 359  Q
    ||||||||||| |||||   ||||  ||||||||| | ||||||||||  || |||||||  || || |||||||||||||    
T  12840796 aaaacttatttcaaaagacgaaagtttaataaaag-tgaatagaattgttgggttgaattgcccggcccaatgcaagatta 12840875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 20718004 - 20717936
Alignment:
Q  181 ttgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctcta 250  Q
    ||||| ||||||| ||||||||||||||||||| |||||||| ||||| |||||||| ||||||| ||||    
T  20718004 ttgatagacgaaattggcaagtgcaccaaatcgtaacaagtaataaagtagtaagtt-tatcgttgtcta 20717936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 182 - 359
Target Start/End: Original strand, 47023552 - 47023733
Alignment:
Q  182 tgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataatt---- 277  Q
    ||||| |||||| |||||||| || ||||||| |||||||| ||| | |||||||| |||| ||||  |||||||||||||||||||| | |||||        
T  47023552 tgatgaacgaaattggcaagtacatcaaatcgtaacaagtaataaggtagtaagtt-tatctttcttcacagagattgtcgttcaacttagtaattaatc 47023650  T
Q  278 agcaaaacttattttaaa-agtgaaaagtaataaaagataaatagaattgaaggattgaattatcctgctcaatgcaagatta 359  Q
    |  ||||||||||| ||| ||||||||  ||  | |  | |||||||||| ||| ||||||| |||||| |||||||||||||    
T  47023651 aataaaacttatttcaaagagtgaaaataaactagaattgaatagaattgcagggttgaattttcctgcccaatgcaagatta 47023733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 199 - 295
Target Start/End: Complemental strand, 24580056 - 24579961
Alignment:
Q  199 aagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagcaaaacttattttaaa 295  Q
    ||||||||||||||| |||||||| ||||| ||| |||| |||||||||| |||  ||||||||||||| | | ||||||  ||||||||| |||||    
T  24580056 aagtgcaccaaatcgtaacaagtaataaagtagttagtt-tatcgttctccacaaggattgtcgttcaatttagtaattattaaaacttatattaaa 24579961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 267
Target Start/End: Original strand, 12805768 - 12805852
Alignment:
Q  182 tgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaa 267  Q
    ||||| |||||| ||| || |||||||||||| |||||||| ||||| |||||||| |||| ||||| |||  |||||||||||||    
T  12805768 tgatgaacgaaattggtaaatgcaccaaatcgtaacaagtaataaagtagtaagtt-tatcattctccacaaggattgtcgttcaa 12805852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 13896693 - 13896772
Alignment:
Q  8 gtatctatgttccaggaccgtacaactcctaccgaatgatgattgtatttcagataactggattaccaacatctcatgta 87  Q
    |||||||||||||| ||| |||||||||||||| ||||||  |||||| ||   ||||| |||||| | |||||||||||    
T  13896693 gtatctatgttccaagacagtacaactcctaccaaatgatatttgtatctctcctaactagattactaccatctcatgta 13896772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 181 - 223
Target Start/End: Complemental strand, 15623983 - 15623941
Alignment:
Q  181 ttgatggacgaaactggcaagtgcaccaaatcgcaacaagtag 223  Q
    ||||||||||||| |||||||| |||||||||| |||||||||    
T  15623983 ttgatggacgaaattggcaagtacaccaaatcgaaacaagtag 15623941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 185 - 291
Target Start/End: Complemental strand, 27304014 - 27303909
Alignment:
Q  185 tggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagcaaaa 284  Q
    ||||||||| ||| ||||| ||||||||| || ||||| ||||| |||||||| ||||||| |  |||  ||||||||||||||| | ||||||  | ||    
T  27304014 tggacgaaattggtaagtgtaccaaatcgtaataagtaataaagtagtaagtt-tatcgtttttcacaaggattgtcgttcaacttagtaattaatacaa 27303916  T
Q  285 cttattt 291  Q
    |||||||    
T  27303915 cttattt 27303909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 5678718 - 5678677
Alignment:
Q  187 gacgaaactggcaagtgcaccaaatcgcaacaagtagtaaag 228  Q
    ||||||| |||||||||||||||||| ||||||||| |||||    
T  5678718 gacgaaattggcaagtgcaccaaatcacaacaagtaataaag 5678677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 187 - 295
Target Start/End: Original strand, 13553462 - 13553569
Alignment:
Q  187 gacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagcaaaact 286  Q
    ||||||| || |||||| | ||||||| || ||||| ||||| |||||||| ||||||||   ||| | |||||||||||||| | || |||  ||||||    
T  13553462 gacgaaattgacaagtgtatcaaatcgtaataagtaataaagtagtaagtt-tatcgttccacacaaaaattgtcgttcaacttagtatttaataaaact 13553560  T
Q  287 tattttaaa 295  Q
    |||||||||    
T  13553561 tattttaaa 13553569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 1e-18; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 181 - 359
Target Start/End: Complemental strand, 15576254 - 15576081
Alignment:
Q  181 ttgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagc 280  Q
    ||||||||||||| ||||||||||| ||||||| |||||||| ||||| ||| |||| ||||||||||  ||| ||||||||||||||| | ||| ||      
T  15576254 ttgatggacgaaattggcaagtgcatcaaatcgtaacaagtaataaagtagtcagtt-tatcgttctccgcagggattgtcgttcaacttagtaactaat 15576156  T
Q  281 aaaacttattttaaaagtgaaaagtaataaaagataaatagaattgaaggattgaattatcctgctcaatgcaagatta 359  Q
    ||||||||| | ||||| ||||   |||||||| | |||||||||| ||   ||||||  ||||| |||||||||||||    
T  15576155 aaaacttatatcaaaagcgaaagtaaataaaag-tgaatagaattgcag---tgaatttccctgcccaatgcaagatta 15576081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 184 - 296
Target Start/End: Complemental strand, 25940267 - 25940161
Alignment:
Q  184 atggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagcaaa 283  Q
    |||||||||| |||||||||||| |||| | |||     |||||| ||||||||||||||||||| |||  |||||||||||||||||||||| || |||    
T  25940267 atggacgaaattggcaagtgcactaaattgtaac-----gtaaagtagtaagttgtatcgttctc-acatggattgtcgttcaactcaataataagaaaa 25940174  T
Q  284 acttattttaaaa 296  Q
    |||||||||||||    
T  25940173 acttattttaaaa 25940161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 363
Target Start/End: Complemental strand, 13194342 - 13194170
Alignment:
Q  181 ttgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagc 280  Q
    ||||||||||||| ||||||||||||||||||| |||||||| ||||| |||||           ||| |||| |||| |||||||||| | |||||||     
T  13194342 ttgatggacgaaattggcaagtgcaccaaatcgtaacaagtaataaagtagtaa-----------ctccacagggattatcgttcaacttagtaattagt 13194254  T
Q  281 aaaacttattttaaaagtgaaaagtaataaaagat-aaatagaattgaaggattgaattatcctgctcaatgcaagattaggtt 363  Q
    ||||||||||| ||| |   | ||||| | || || ||||||| ||| ||| |||||||| ||||| |||||||||||||||||    
T  13194253 aaaacttatttcaaagggtgacagtaaaataaaatcaaatagagttgcagggttgaattaccctgcccaatgcaagattaggtt 13194170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 291
Target Start/End: Complemental strand, 8037095 - 8037001
Alignment:
Q  195 tggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagcaaaacttattt 291  Q
    |||||||||||| |||||| |||||||| ||||| |||||||| || || |||| ||| |||||||| ||||||||  |||||||  ||||||||||    
T  8037095 tggcaagtgcactaaatcgtaacaagtaataaagtagtaagtt-taccg-tctccacatagattgtcattcaactcggtaattagtcaaacttattt 8037001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 237
Target Start/End: Complemental strand, 13782469 - 13782414
Alignment:
Q  182 tgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagtt 237  Q
    |||||||||||| || |||||||||||||||| ||||| || ||||| ||||||||    
T  13782469 tgatggacgaaattgacaagtgcaccaaatcgtaacaattaataaagtagtaagtt 13782414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 237
Target Start/End: Complemental strand, 13789791 - 13789736
Alignment:
Q  182 tgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagtt 237  Q
    |||||||||||| || |||||||||||||||| ||||| || ||||| ||||||||    
T  13789791 tgatggacgaaattgacaagtgcaccaaatcgtaacaattaataaagtagtaagtt 13789736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 237
Target Start/End: Complemental strand, 13804046 - 13803991
Alignment:
Q  182 tgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagtt 237  Q
    |||||||||||| || |||||||||||||||| ||||| || ||||| ||||||||    
T  13804046 tgatggacgaaattgacaagtgcaccaaatcgtaacaattaataaagtagtaagtt 13803991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0855 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0855
Description:

Target: scaffold0855; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 188 - 363
Target Start/End: Original strand, 2021 - 2195
Alignment:
Q  188 acgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagcaaaactt 287  Q
    |||||| ||||||||||||||||||| ||||| || ||||| ||||| || |||||||||| |  || |||||||||||||| | |||||   |||||||    
T  2021 acgaaattggcaagtgcaccaaatcgtaacaaatattaaagtagtaaatt-tatcgttctccattgaaattgtcgttcaacttagtaattcataaaactt 2119  T
Q  288 attttaaaagtgaaaagtaataaaagataaatagaattgaaggattgaattatcctgctcaatgcaagattaggtt 363  Q
    ||||||||||   ||||||||||||  | |||| |  || ||| |||||||  ||||| |||| ||||||||||||    
T  2120 attttaaaaggcgaaagtaataaaaagtgaatatacatggagggttgaatttccctgcccaatacaagattaggtt 2195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0847 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0847
Description:

Target: scaffold0847; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 188 - 363
Target Start/End: Original strand, 2186 - 2360
Alignment:
Q  188 acgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagcaaaactt 287  Q
    |||||| ||||||||||||||||||| ||||| || ||||| ||||| || |||||||||| |  || |||||||||||||| | |||||   |||||||    
T  2186 acgaaattggcaagtgcaccaaatcgtaacaaatattaaagtagtaaatt-tatcgttctccattgaaattgtcgttcaacttagtaattcataaaactt 2284  T
Q  288 attttaaaagtgaaaagtaataaaagataaatagaattgaaggattgaattatcctgctcaatgcaagattaggtt 363  Q
    ||||||||||   ||||||||||||  | |||| |  || ||| |||||||  ||||| |||| ||||||||||||    
T  2285 attttaaaaggcgaaagtaataaaaagtgaatatacatggagggttgaatttccctgcccaatacaagattaggtt 2360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 184 - 363
Target Start/End: Complemental strand, 10021 - 9844
Alignment:
Q  184 atggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaactcaataattagcaaa 283  Q
    ||||| |||| |||||| |||||||||||| |||||||| ||||| ||||| || ||||||| |||||||  ||||   ||||| | | ||||||  |||    
T  10021 atggatgaaattggcaaatgcaccaaatcgtaacaagtaataaagtagtaaatt-tatcgttttctacaggtattgctattcaatttagtaattaa-aaa 9924  T
Q  284 acttattttaaaagtgaaaagt--aataaaagataaatagaattgaaggattgaattatcctgctcaatgcaagattaggtt 363  Q
    |||||||| |||||  |||| |  |||||||| | |||||||||| ||| |||||||||| |||||||||||||||||||||    
T  9923 acttatttcaaaaggcaaaaattaaataaaag-tgaatagaattgcagggttgaattatc-tgctcaatgcaagattaggtt 9844  T

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Target: scaffold0171 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 182 - 268
Target Start/End: Complemental strand, 7421 - 7336
Alignment:
Q  182 tgatggacgaaactggcaagtgcaccaaatcgcaacaagtagtaaagaagtaagttgtatcgttctctacagagattgtcgttcaac 268  Q
    |||||||||||| || |||||||||||||||| |||||||| ||||| |||||||| |||||||||| ||||  ||| |||||||||    
T  7421 tgatggacgaaattgacaagtgcaccaaatcgtaacaagtaataaagtagtaagtt-tatcgttctccacaggtattatcgttcaac 7336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0542 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 1013 - 1092
Alignment:
Q  8 gtatctatgttccaggaccgtacaactcctaccgaatgatgattgtatttcagataactggattaccaacatctcatgta 87  Q
    |||||||||||| |  || || |||||||| || ||||||| |||||| |||| ||||||||| |||||||| |||||||    
T  1013 gtatctatgttctaatacagtgcaactcctcccaaatgatgtttgtatctcagttaactggatcaccaacatatcatgta 1092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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