View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4801-Insertion-4 (Length: 643)

Name: NF4801-Insertion-4
Description: NF4801
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4801-Insertion-4
NF4801-Insertion-4
[»] chr2 (43 HSPs)
chr2 (11-372)||(6952566-6952927)
chr2 (462-541)||(3201379-3201458)
chr2 (458-541)||(45660418-45660501)
chr2 (463-541)||(19264153-19264231)
chr2 (458-541)||(6110223-6110306)
chr2 (458-541)||(14874016-14874099)
chr2 (458-541)||(28599172-28599255)
chr2 (458-541)||(6765957-6766040)
chr2 (466-541)||(8701655-8701730)
chr2 (458-541)||(35517176-35517259)
chr2 (458-539)||(11617079-11617160)
chr2 (458-541)||(41528309-41528392)
chr2 (458-541)||(45085310-45085393)
chr2 (467-539)||(28858364-28858436)
chr2 (466-541)||(25572098-25572173)
chr2 (458-541)||(33677536-33677619)
chr2 (458-540)||(24204553-24204635)
chr2 (458-527)||(43415468-43415537)
chr2 (458-541)||(12938295-12938378)
chr2 (470-541)||(29524077-29524148)
chr2 (467-541)||(33198664-33198738)
chr2 (472-541)||(40584436-40584505)
chr2 (458-541)||(9864742-9864826)
chr2 (466-538)||(40808752-40808823)
chr2 (465-528)||(32010168-32010231)
chr2 (466-528)||(26998383-26998445)
chr2 (466-528)||(32273737-32273799)
chr2 (466-528)||(38071061-38071123)
chr2 (458-541)||(35115827-35115911)
chr2 (470-528)||(4891675-4891733)
chr2 (470-540)||(5963255-5963324)
chr2 (458-532)||(35022961-35023034)
chr2 (482-527)||(16494974-16495019)
chr2 (458-533)||(4707482-4707557)
chr2 (609-643)||(35517073-35517107)
chr2 (609-643)||(41528207-41528241)
chr2 (466-539)||(9709568-9709641)
chr2 (492-528)||(8032726-8032762)
chr2 (458-533)||(7645251-7645326)
chr2 (609-643)||(6110376-6110410)
chr2 (466-528)||(20380189-20380251)
chr2 (489-522)||(30421237-30421270)
chr2 (495-527)||(44442198-44442230)
[»] chr4 (61 HSPs)
chr4 (458-541)||(20281642-20281725)
chr4 (458-541)||(47867930-47868013)
chr4 (458-541)||(2229298-2229381)
chr4 (458-541)||(4058766-4058849)
chr4 (458-541)||(7654668-7654751)
chr4 (458-541)||(55580721-55580804)
chr4 (458-541)||(26916376-26916459)
chr4 (463-541)||(16604869-16604947)
chr4 (463-541)||(56318093-56318171)
chr4 (458-539)||(39078210-39078290)
chr4 (463-540)||(41414634-41414711)
chr4 (458-541)||(10069748-10069831)
chr4 (469-540)||(14332812-14332883)
chr4 (458-541)||(17794559-17794642)
chr4 (458-541)||(24940416-24940499)
chr4 (458-541)||(5483296-5483379)
chr4 (458-541)||(20716231-20716314)
chr4 (458-541)||(29203557-29203640)
chr4 (462-540)||(28669023-28669101)
chr4 (462-534)||(21722704-21722776)
chr4 (466-541)||(35310768-35310843)
chr4 (466-541)||(42915581-42915656)
chr4 (472-540)||(48793660-48793728)
chr4 (465-539)||(47516216-47516290)
chr4 (471-539)||(46070553-46070621)
chr4 (466-541)||(8683332-8683407)
chr4 (463-541)||(5815520-5815598)
chr4 (458-512)||(16473828-16473882)
chr4 (480-534)||(50145794-50145848)
chr4 (466-527)||(29511490-29511551)
chr4 (458-527)||(32323280-32323349)
chr4 (466-541)||(17186822-17186896)
chr4 (468-527)||(32410393-32410452)
chr4 (462-528)||(32203277-32203343)
chr4 (482-528)||(49080321-49080367)
chr4 (466-539)||(5841805-5841878)
chr4 (470-526)||(5064685-5064741)
chr4 (493-541)||(17799187-17799235)
chr4 (463-534)||(31280253-31280318)
chr4 (466-528)||(28318445-28318505)
chr4 (477-539)||(8178276-8178338)
chr4 (494-528)||(23978169-23978203)
chr4 (479-541)||(25297261-25297323)
chr4 (470-528)||(28142652-28142710)
chr4 (466-528)||(37911948-37912010)
chr4 (472-541)||(1585379-1585448)
chr4 (504-541)||(35529723-35529760)
chr4 (477-540)||(19351899-19351963)
chr4 (465-528)||(50768504-50768567)
chr4 (609-643)||(7654576-7654610)
chr4 (479-541)||(12002679-12002741)
chr4 (609-643)||(14332708-14332742)
chr4 (458-528)||(29180403-29180473)
chr4 (458-528)||(29899774-29899844)
chr4 (458-528)||(30011945-30012015)
chr4 (494-528)||(40411165-40411199)
chr4 (609-643)||(41414778-41414812)
chr4 (609-643)||(47867828-47867862)
chr4 (492-541)||(40553820-40553869)
chr4 (615-643)||(2229196-2229224)
chr4 (466-534)||(53848518-53848586)
[»] chr1 (74 HSPs)
chr1 (465-541)||(2126091-2126167)
chr1 (458-541)||(11241080-11241163)
chr1 (458-541)||(6786891-6786974)
chr1 (458-541)||(12448992-12449075)
chr1 (458-541)||(15959665-15959748)
chr1 (458-541)||(24190522-24190605)
chr1 (458-541)||(42965841-42965923)
chr1 (463-541)||(6785509-6785587)
chr1 (458-541)||(32624030-32624113)
chr1 (458-541)||(33369604-33369686)
chr1 (458-541)||(39555611-39555694)
chr1 (463-539)||(28016776-28016852)
chr1 (458-541)||(35691446-35691529)
chr1 (462-541)||(43667332-43667411)
chr1 (458-540)||(3861720-3861802)
chr1 (461-541)||(32983200-32983278)
chr1 (466-541)||(44148869-44148944)
chr1 (462-541)||(46818531-46818610)
chr1 (458-536)||(40718736-40718814)
chr1 (463-541)||(45226191-45226269)
chr1 (467-541)||(47014525-47014599)
chr1 (458-534)||(7467987-7468064)
chr1 (458-534)||(52984993-52985069)
chr1 (466-541)||(3076348-3076423)
chr1 (458-537)||(46543039-46543118)
chr1 (463-533)||(2246044-2246114)
chr1 (466-539)||(16688191-16688264)
chr1 (466-539)||(33431614-33431687)
chr1 (460-541)||(37735410-37735491)
chr1 (477-541)||(10558800-10558864)
chr1 (458-541)||(13136579-13136661)
chr1 (458-540)||(43765348-43765431)
chr1 (489-540)||(47600095-47600146)
chr1 (466-539)||(5858404-5858477)
chr1 (484-540)||(50370015-50370071)
chr1 (458-532)||(3875044-3875116)
chr1 (470-541)||(24728664-24728735)
chr1 (458-541)||(25391735-25391817)
chr1 (458-541)||(39932597-39932680)
chr1 (466-528)||(7397772-7397834)
chr1 (463-541)||(28120785-28120863)
chr1 (466-539)||(5950494-5950567)
chr1 (465-534)||(8889729-8889798)
chr1 (484-541)||(16854193-16854250)
chr1 (492-541)||(32318619-32318668)
chr1 (493-541)||(6787050-6787098)
chr1 (465-541)||(30221778-30221854)
chr1 (489-528)||(13351746-13351785)
chr1 (478-541)||(23392211-23392274)
chr1 (472-538)||(1034913-1034979)
chr1 (466-528)||(50176588-50176650)
chr1 (466-539)||(37538864-37538937)
chr1 (484-540)||(1820469-1820524)
chr1 (492-527)||(15912265-15912300)
chr1 (463-526)||(32742232-32742295)
chr1 (459-541)||(298696-298777)
chr1 (470-528)||(25185341-25185399)
chr1 (470-528)||(30701422-30701480)
chr1 (609-643)||(43667476-43667510)
chr1 (466-539)||(35366236-35366309)
chr1 (466-527)||(44510252-44510313)
chr1 (472-540)||(47302945-47303012)
chr1 (495-541)||(7876004-7876050)
chr1 (609-643)||(12449143-12449177)
chr1 (458-528)||(23873855-23873925)
chr1 (609-643)||(32624182-32624216)
chr1 (458-528)||(38942469-38942539)
chr1 (609-643)||(39555762-39555796)
chr1 (466-528)||(45840099-45840160)
chr1 (378-412)||(47014436-47014470)
chr1 (477-539)||(51338941-51339003)
chr1 (477-539)||(51840539-51840601)
chr1 (495-539)||(41063796-41063840)
chr1 (466-522)||(46803704-46803760)
[»] chr8 (49 HSPs)
chr8 (458-541)||(34890200-34890283)
chr8 (463-541)||(36190823-36190901)
chr8 (458-541)||(26483583-26483666)
chr8 (458-541)||(7022429-7022512)
chr8 (458-541)||(8711928-8712010)
chr8 (458-541)||(31734166-31734249)
chr8 (458-541)||(43216373-43216456)
chr8 (458-541)||(28348661-28348744)
chr8 (458-533)||(35456051-35456125)
chr8 (458-541)||(41086412-41086495)
chr8 (458-541)||(13143971-13144055)
chr8 (458-541)||(7858579-7858662)
chr8 (458-537)||(13143819-13143898)
chr8 (463-541)||(15957942-15958020)
chr8 (458-540)||(16358138-16358219)
chr8 (472-541)||(35525638-35525707)
chr8 (463-541)||(24892889-24892970)
chr8 (458-541)||(29920294-29920377)
chr8 (463-540)||(34158321-34158399)
chr8 (458-541)||(30575860-30575944)
chr8 (466-528)||(41362341-41362403)
chr8 (458-541)||(8107643-8107727)
chr8 (489-535)||(2052891-2052937)
chr8 (481-539)||(26954441-26954499)
chr8 (466-539)||(17713276-17713349)
chr8 (458-541)||(16879418-16879501)
chr8 (503-541)||(7499778-7499816)
chr8 (466-528)||(8673445-8673507)
chr8 (458-520)||(15824663-15824725)
chr8 (466-528)||(17336806-17336868)
chr8 (492-528)||(8745647-8745683)
chr8 (492-539)||(2628224-2628271)
chr8 (458-541)||(8709812-8709895)
chr8 (609-643)||(7022580-7022614)
chr8 (485-539)||(8712577-8712631)
chr8 (470-528)||(25195085-25195142)
chr8 (466-539)||(28497172-28497245)
chr8 (477-534)||(44663834-44663891)
chr8 (501-541)||(3642039-3642078)
chr8 (458-526)||(4480841-4480909)
chr8 (471-526)||(4038920-4038975)
chr8 (492-527)||(33563571-33563606)
chr8 (609-643)||(7858477-7858511)
chr8 (477-527)||(14693434-14693484)
chr8 (466-528)||(38072227-38072289)
chr8 (493-534)||(14576213-14576254)
chr8 (609-638)||(41086563-41086592)
chr8 (477-541)||(4046939-4047003)
chr8 (467-539)||(5217445-5217517)
[»] chr7 (40 HSPs)
chr7 (458-541)||(45486008-45486091)
chr7 (458-541)||(46760281-46760364)
chr7 (464-541)||(25737657-25737734)
chr7 (458-541)||(6191098-6191181)
chr7 (458-535)||(12632368-12632445)
chr7 (458-541)||(14805923-14806005)
chr7 (458-541)||(15252917-15252999)
chr7 (458-541)||(18102583-18102666)
chr7 (458-541)||(19912793-19912876)
chr7 (458-541)||(20123704-20123787)
chr7 (458-541)||(25944629-25944712)
chr7 (458-541)||(35923305-35923387)
chr7 (458-541)||(4910659-4910740)
chr7 (470-539)||(35068885-35068954)
chr7 (466-541)||(22632142-22632217)
chr7 (466-541)||(47779657-47779732)
chr7 (489-540)||(9158143-9158194)
chr7 (458-541)||(44682930-44683013)
chr7 (467-541)||(31549936-31550010)
chr7 (479-540)||(16917525-16917586)
chr7 (466-527)||(31768994-31769055)
chr7 (489-541)||(4069056-4069108)
chr7 (458-540)||(14574618-14574700)
chr7 (458-533)||(47557623-47557700)
chr7 (470-526)||(35888005-35888061)
chr7 (458-541)||(2610592-2610675)
chr7 (492-539)||(24151640-24151687)
chr7 (458-528)||(9818529-9818599)
chr7 (458-528)||(10720454-10720524)
chr7 (609-643)||(18102480-18102514)
chr7 (492-541)||(48413771-48413820)
chr7 (492-528)||(10248594-10248630)
chr7 (466-526)||(39170602-39170662)
chr7 (493-539)||(8015732-8015778)
chr7 (609-643)||(39174201-39174235)
chr7 (458-528)||(40560443-40560513)
chr7 (458-528)||(41815676-41815746)
chr7 (609-643)||(47557922-47557956)
chr7 (458-528)||(48879449-48879519)
chr7 (465-533)||(38260377-38260445)
[»] chr6 (21 HSPs)
chr6 (458-541)||(11082270-11082353)
chr6 (458-541)||(21542471-21542554)
chr6 (458-541)||(35129079-35129163)
chr6 (458-541)||(3095745-3095827)
chr6 (458-541)||(30794217-30794300)
chr6 (465-541)||(34177673-34177749)
chr6 (466-541)||(7274908-7274983)
chr6 (466-528)||(16524443-16524505)
chr6 (465-541)||(12461461-12461537)
chr6 (466-528)||(4032051-4032113)
chr6 (466-528)||(4988007-4988069)
chr6 (466-528)||(16013465-16013527)
chr6 (492-534)||(5300659-5300701)
chr6 (458-522)||(5822059-5822123)
chr6 (466-525)||(3888494-3888553)
chr6 (458-533)||(5881777-5881852)
chr6 (464-539)||(31107245-31107320)
chr6 (609-643)||(3095897-3095931)
chr6 (458-528)||(17598355-17598425)
chr6 (609-642)||(35129231-35129264)
chr6 (615-643)||(21542369-21542397)
[»] chr5 (46 HSPs)
chr5 (458-541)||(20644067-20644150)
chr5 (458-541)||(42273700-42273783)
chr5 (458-541)||(6686437-6686521)
chr5 (458-541)||(11261909-11261992)
chr5 (458-541)||(34425383-34425466)
chr5 (458-541)||(37522614-37522697)
chr5 (458-541)||(43589987-43590070)
chr5 (467-541)||(38130150-38130224)
chr5 (463-539)||(5984138-5984214)
chr5 (458-541)||(37562786-37562870)
chr5 (466-541)||(19413194-19413269)
chr5 (458-541)||(32111055-32111138)
chr5 (458-540)||(20039156-20039238)
chr5 (465-537)||(12912326-12912398)
chr5 (465-541)||(8225514-8225591)
chr5 (466-541)||(25840917-25840992)
chr5 (470-541)||(39505270-39505341)
chr5 (459-538)||(43454349-43454428)
chr5 (463-541)||(17351441-17351519)
chr5 (488-541)||(32017756-32017809)
chr5 (480-541)||(38280900-38280961)
chr5 (477-541)||(4463413-4463477)
chr5 (467-527)||(8959707-8959767)
chr5 (465-540)||(41625543-41625618)
chr5 (474-540)||(104255-104321)
chr5 (466-539)||(5369064-5369137)
chr5 (472-533)||(42104287-42104348)
chr5 (466-526)||(5736273-5736333)
chr5 (492-536)||(10153987-10154031)
chr5 (458-541)||(23233464-23233547)
chr5 (466-528)||(8506497-8506559)
chr5 (502-540)||(9957488-9957526)
chr5 (466-528)||(16153379-16153440)
chr5 (466-528)||(1144524-1144586)
chr5 (495-541)||(12729937-12729982)
chr5 (495-541)||(12792839-12792884)
chr5 (458-528)||(13146793-13146863)
chr5 (471-528)||(3463853-3463910)
chr5 (467-528)||(29307221-29307282)
chr5 (458-528)||(31690645-31690715)
chr5 (609-643)||(43590138-43590172)
chr5 (470-539)||(30703656-30703725)
chr5 (466-527)||(32432319-32432380)
chr5 (465-525)||(32079573-32079633)
chr5 (615-643)||(37522772-37522800)
chr5 (615-643)||(37562944-37562972)
[»] chr3 (68 HSPs)
chr3 (458-541)||(30189628-30189711)
chr3 (458-539)||(37075019-37075100)
chr3 (458-541)||(6438140-6438223)
chr3 (458-541)||(37042401-37042484)
chr3 (458-541)||(50651021-50651104)
chr3 (463-541)||(23311582-23311660)
chr3 (458-541)||(11054295-11054379)
chr3 (465-541)||(28875463-28875539)
chr3 (463-541)||(23910502-23910580)
chr3 (458-540)||(46711642-46711724)
chr3 (469-541)||(579133-579205)
chr3 (463-539)||(9264610-9264686)
chr3 (463-539)||(36546601-36546677)
chr3 (463-539)||(36561638-36561714)
chr3 (458-541)||(14752192-14752275)
chr3 (458-541)||(35963209-35963292)
chr3 (463-541)||(7866472-7866550)
chr3 (458-540)||(6075139-6075221)
chr3 (463-541)||(29235244-29235322)
chr3 (463-537)||(31836980-31837054)
chr3 (458-540)||(47864249-47864331)
chr3 (458-531)||(41476320-41476393)
chr3 (458-541)||(26724975-26725058)
chr3 (458-541)||(32619814-32619897)
chr3 (458-541)||(53270292-53270375)
chr3 (470-540)||(2927347-2927417)
chr3 (465-541)||(19464132-19464208)
chr3 (458-541)||(54464880-54464962)
chr3 (470-538)||(3972335-3972402)
chr3 (470-538)||(3997476-3997543)
chr3 (492-540)||(34722623-34722671)
chr3 (492-539)||(34194941-34194988)
chr3 (466-528)||(22479046-22479108)
chr3 (463-533)||(26208079-26208149)
chr3 (458-541)||(50730166-50730249)
chr3 (458-541)||(50782605-50782688)
chr3 (492-539)||(16033005-16033052)
chr3 (465-528)||(38401444-38401507)
chr3 (492-539)||(46918231-46918278)
chr3 (482-528)||(10014333-10014379)
chr3 (482-528)||(10114975-10115021)
chr3 (482-528)||(10252075-10252121)
chr3 (471-541)||(20847265-20847335)
chr3 (466-528)||(21214305-21214367)
chr3 (492-534)||(54725628-54725670)
chr3 (466-539)||(8097010-8097083)
chr3 (484-541)||(8703165-8703221)
chr3 (484-541)||(9055052-9055108)
chr3 (458-539)||(31292664-31292745)
chr3 (466-528)||(22456000-22456062)
chr3 (504-541)||(6752727-6752764)
chr3 (466-539)||(30454717-30454789)
chr3 (458-534)||(33973550-33973627)
chr3 (493-541)||(3084199-3084247)
chr3 (466-526)||(6784390-6784450)
chr3 (495-539)||(7886638-7886682)
chr3 (609-643)||(11054443-11054477)
chr3 (609-643)||(23311728-23311762)
chr3 (609-643)||(23910630-23910664)
chr3 (458-528)||(31126275-31126345)
chr3 (609-643)||(36546497-36546531)
chr3 (609-643)||(36561784-36561818)
chr3 (466-524)||(47443966-47444023)
chr3 (458-528)||(55400801-55400871)
chr3 (466-523)||(25242170-25242227)
chr3 (470-523)||(46557166-46557219)
chr3 (465-541)||(30612228-30612304)
chr3 (492-528)||(48291886-48291922)
[»] scaffold0774 (1 HSPs)
scaffold0774 (458-541)||(3453-3536)
[»] scaffold0300 (1 HSPs)
scaffold0300 (458-541)||(598-681)
[»] scaffold0442 (1 HSPs)
scaffold0442 (467-541)||(10098-10172)
[»] scaffold0045 (2 HSPs)
scaffold0045 (463-541)||(78010-78088)
scaffold0045 (609-643)||(77908-77942)
[»] scaffold0062 (1 HSPs)
scaffold0062 (458-541)||(44796-44879)
[»] scaffold0111 (1 HSPs)
scaffold0111 (463-539)||(40234-40310)
[»] scaffold0009 (1 HSPs)
scaffold0009 (466-541)||(157847-157922)
[»] scaffold0018 (1 HSPs)
scaffold0018 (479-541)||(154914-154976)
[»] scaffold0132 (2 HSPs)
scaffold0132 (458-541)||(1065-1148)
scaffold0132 (458-541)||(9025-9108)
[»] scaffold1786 (1 HSPs)
scaffold1786 (478-541)||(900-963)
[»] scaffold0012 (1 HSPs)
scaffold0012 (468-541)||(160303-160376)
[»] scaffold0565 (1 HSPs)
scaffold0565 (465-523)||(5907-5965)
[»] scaffold0330 (1 HSPs)
scaffold0330 (466-528)||(3234-3296)
[»] scaffold1157 (1 HSPs)
scaffold1157 (477-538)||(1711-1772)
[»] scaffold0010 (1 HSPs)
scaffold0010 (466-539)||(160952-161025)


Alignment Details
Target: chr2 (Bit Score: 350; Significance: 0; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 350; E-Value: 0
Query Start/End: Original strand, 11 - 372
Target Start/End: Original strand, 6952566 - 6952927
Alignment:
Q  11 agatattagtatttatggaaaaattaggcattggagtttgtctcttggatatgtacaacaagccaacaactcgaagttgattattcatgcaaacctataa 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6952566 agatattagtatttatggaaaaattaggcattggagtttgtctcttggatatgtacaacaagccaacaactcgaagttgattattcatgcaaacctataa 6952665  T
Q  111 ttataaacaattcgttccacttatggtatgtttggttagactgtggaagtgctaatctccgtcttaacgagagtagttgatgtggaaatagagaagatag 210  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6952666 ttataaacaattcgttccacttatggtatatttggttagactgtggaagtgctaatctccgtcttaacgagagtagttgatgtggaaatagagaagatag 6952765  T
Q  211 aaaacctagcttttatgttgacgtggttacgtattgaaattcttaaattgcaatgtggttctaaacatatacttatagtagtttggtttgatcgagggac 310  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6952766 aaaacctagctttcacgttgacgtggttacgtattgaaattcttaaattgcaatgtggttctaaacatatacttatagtagtttggtttgatcgagggac 6952865  T
Q  311 accaaataaatgtataacttttaagtggtattttccgcttcatctataaagactcactcttg 372  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6952866 accaaataaatgtataacttttaagtggtattttccgcttcatctataaagactcactcttg 6952927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 462 - 541
Target Start/End: Complemental strand, 3201458 - 3201379
Alignment:
Q  462 aagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3201458 aagtatagttttttgtgttttctttggaaaaagttttatagaaagatgtaaaaacaattttcattggctattggttatgg 3201379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 45660501 - 45660418
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45660501 tttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 45660418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 463 - 541
Target Start/End: Complemental strand, 19264231 - 19264153
Alignment:
Q  463 agtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19264231 agtataattttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 19264153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 6110223 - 6110306
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110223 tttggagtatagctttttgtgttttcttcggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 6110306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 14874099 - 14874016
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14874099 tttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaataattttcattggctattggttatgg 14874016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 28599172 - 28599255
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  28599172 tttggagtatagttttttgtgttttctttggaaaaagatttataggaagatgtaaaaataattttcattggctattggttatgg 28599255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 6765957 - 6766040
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||| |||| |||||||||||||    
T  6765957 tttgaagtatagttttttatgttttcattggaataaattttataggaagatgtaaaaacaatttttattgactattggttatgg 6766040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 466 - 541
Target Start/End: Complemental strand, 8701730 - 8701655
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||    
T  8701730 atagttttttatgttttctttggaataagtttcatgggaagatgtaaaaacaattttcattggctattggttatgg 8701655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 35517259 - 35517176
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  35517259 tttggagtatagttttttgtgttttctttggaaaaagttttatagtgagatgtaaaaataattttcattggctattggttatgg 35517176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 458 - 539
Target Start/End: Complemental strand, 11617160 - 11617079
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    |||| ||||||||||||  | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11617160 tttggagtatagtttttggtattttctttgaaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 11617079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 41528392 - 41528309
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||||||||||||||| ||||||||||| ||    |||||||||||||||||||||||||||||||||||||||||||||||    
T  41528392 tttgaagtatagttttttgtgttttctttgaaattttttttataggaagatgtaaaaacaattttcattggctattggttatgg 41528309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 45085393 - 45085310
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  45085393 tttggagtatagttttttgtattttctttgaaaaaagttttataggaagatgtaaaaacaattttcattagccattggttatgg 45085310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 467 - 539
Target Start/End: Complemental strand, 28858436 - 28858364
Alignment:
Q  467 tagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    ||||||||| ||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  28858436 tagttttttgtgttttctttgaaaaaagttttatagaaagatgtaaaaataattttcattggctattggttat 28858364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 466 - 541
Target Start/End: Complemental strand, 25572173 - 25572098
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||||||| |||||||||||||| |||||| || ||||||||||||||||||||||||||| ||||||||||||    
T  25572173 atagttttttgtgttttctttggaataagtttcatgggaagatgtaaaaacaattttcattggatattggttatgg 25572098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 33677619 - 33677536
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||| ||||||||||||||||| |||  |  |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  33677619 tttgaagaatagttttttatgttttttttttactaagttttataggaagatgtaaaaacaattttcattgactattggttatgg 33677536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 458 - 540
Target Start/End: Original strand, 24204553 - 24204635
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatg 540  Q
    |||| |||||| ||| || |||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||    
T  24204553 tttggagtataatttattgtgttttctttggaataagttttataggaatatgtaaaatcaattttcattggctattggttatg 24204635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 458 - 527
Target Start/End: Complemental strand, 43415537 - 43415468
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 527  Q
    ||||||||||| |||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  43415537 tttgaagtataattttttgtgttttctttaaaaaaagttttataggaagatgtaaaaacaattttcattg 43415468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 12938378 - 12938295
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| || |||||||| || ||||||||||||||  ||||||||||||||||||||||||||| ||||||    
T  12938378 tttggagtatagttttttgtgctttctttgaaataagttttataggaaagtgtaaaaacaattttcattggctattgattatgg 12938295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 470 - 541
Target Start/End: Original strand, 29524077 - 29524148
Alignment:
Q  470 ttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||| |||||||||||||| |||||| || |||||||||||||||||||||||||||| |||||||||||    
T  29524077 ttttttgtgttttctttggaataagtttcatgggaagatgtaaaaacaattttcattggcaattggttatgg 29524148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 467 - 541
Target Start/End: Original strand, 33198664 - 33198738
Alignment:
Q  467 tagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||| ||||||||||  || ||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  33198664 tagttttttgtgttttctttaaaagaagttttataggaagatgtaaaaacaattttgattggttattggttatgg 33198738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 472 - 541
Target Start/End: Original strand, 40584436 - 40584505
Alignment:
Q  472 ttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| |||||||||| ||| ||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  40584436 ttttgtgttttctttagaataagttttatgggaagatgtaaaaacaattttcattggttgttggttatgg 40584505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 9864742 - 9864826
Alignment:
Q  458 tttgaagtatagtttttta-tgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| |||||||||||||  |||||||||||||| |||||| || |||||| ||||||||||||||||||||| |||| ||||||    
T  9864742 tttggagtatagtttttttgtgttttctttggaataagtttcatgggaagaggtaaaaacaattttcattggcaattgattatgg 9864826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 466 - 538
Target Start/End: Original strand, 40808752 - 40808823
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggtta 538  Q
    |||||||||| |||||||||||||| |||||| || ||||||||||||||||||||||||| || ||||||||    
T  40808752 atagttttttgtgttttctttggaataagtttcat-ggaagatgtaaaaacaattttcattagcaattggtta 40808823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 465 - 528
Target Start/End: Complemental strand, 32010231 - 32010168
Alignment:
Q  465 tatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    ||||||||||| |||| |||||| || |||||||||||||||||||||||| ||||||||||||    
T  32010231 tatagttttttgtgttatctttgaaataagttttataggaagatgtaaaaataattttcattgg 32010168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 466 - 528
Target Start/End: Complemental strand, 26998445 - 26998383
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    |||||||||| |||| |||||  || |||||||||||||||||||||||||||||||||||||    
T  26998445 atagttttttgtgttatctttaaaataagttttataggaagatgtaaaaacaattttcattgg 26998383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 466 - 528
Target Start/End: Complemental strand, 32273799 - 32273737
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    |||||||||| |||| |||||| || ||||||||||||||||| |||||||||||||||||||    
T  32273799 atagttttttgtgttatctttgaaataagttttataggaagatataaaaacaattttcattgg 32273737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 466 - 528
Target Start/End: Complemental strand, 38071123 - 38071061
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    |||||||||| |||| |||||| || |||||||| ||||||||||||||||||||||||||||    
T  38071123 atagttttttgtgttatctttgaaataagttttacaggaagatgtaaaaacaattttcattgg 38071061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 35115827 - 35115911
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaa-aagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| |||||| |||   || ||||||||||| ||||||||||||||||||||||| | ||||||||||||    
T  35115827 tttggagtatagttttttgtgtttttttttttaataagttttatagaaagatgtaaaaacaattttcatttgttattggttatgg 35115911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 470 - 528
Target Start/End: Original strand, 4891675 - 4891733
Alignment:
Q  470 ttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    |||||| |||| |||||| || ||||||||||||||||||||||||||||||| |||||    
T  4891675 ttttttgtgttatctttgaaataagttttataggaagatgtaaaaacaatttttattgg 4891733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 470 - 540
Target Start/End: Complemental strand, 5963324 - 5963255
Alignment:
Q  470 ttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatg 540  Q
    |||||| |||||||||| ||| ||||||||| ||| |||||||||| |||||| |||||||||||||||||    
T  5963324 ttttttgtgttttctttagaataagttttatggga-gatgtaaaaataatttttattggctattggttatg 5963255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 458 - 532
Target Start/End: Complemental strand, 35023034 - 35022961
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctat 532  Q
    |||| |||||| |||||| |||||| ||||||  |||||| |||||||||||||||||||||||||||| |||||    
T  35023034 tttggagtataattttttgtgtttt-tttggagtaagtttcataggaagatgtaaaaacaattttcatttgctat 35022961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 482 - 527
Target Start/End: Original strand, 16494974 - 16495019
Alignment:
Q  482 tctttggaaaaagttttataggaagatgtaaaaacaattttcattg 527  Q
    |||||| || ||||||||||||||||||||||||||||||||||||    
T  16494974 tctttgaaataagttttataggaagatgtaaaaacaattttcattg 16495019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 458 - 533
Target Start/End: Complemental strand, 4707557 - 4707482
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctatt 533  Q
    |||| ||||||||||||| ||||||| || ||| |||||| |  ||||||||| ||||||||||||||||| ||||    
T  4707557 tttggagtatagttttttgtgttttccttagaataagtttaacgggaagatgttaaaacaattttcattggttatt 4707482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 609 - 643
Target Start/End: Complemental strand, 35517107 - 35517073
Alignment:
Q  609 tcttgaaaaagataaaagtttgtcttttttgctta 643  Q
    |||||||||||||||||||||||||||||||||||    
T  35517107 tcttgaaaaagataaaagtttgtcttttttgctta 35517073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 609 - 643
Target Start/End: Complemental strand, 41528241 - 41528207
Alignment:
Q  609 tcttgaaaaagataaaagtttgtcttttttgctta 643  Q
    |||||||||||||||||||||||||||||||||||    
T  41528241 tcttgaaaaagataaaagtttgtcttttttgctta 41528207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 466 - 539
Target Start/End: Complemental strand, 9709641 - 9709568
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    ||||||| || |||| || ||| || ||||||||||||||||||| ||||||||||||||| | ||||| ||||    
T  9709641 atagtttcttgtgttatccttgaaacaagttttataggaagatgtgaaaacaattttcatttgttattgattat 9709568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 492 - 528
Target Start/End: Original strand, 8032726 - 8032762
Alignment:
Q  492 aagttttataggaagatgtaaaaacaattttcattgg 528  Q
    ||||||||||||||||||||||||||||||| |||||    
T  8032726 aagttttataggaagatgtaaaaacaatttttattgg 8032762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 458 - 533
Target Start/End: Original strand, 7645251 - 7645326
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctatt 533  Q
    |||| |||||| | |||| ||||||| || ||| || ||| || |||| |||||||||||||||||||||||||||    
T  7645251 tttggagtataatattttgtgttttccttagaataaatttcatgggaacatgtaaaaacaattttcattggctatt 7645326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 609 - 643
Target Start/End: Original strand, 6110376 - 6110410
Alignment:
Q  609 tcttgaaaaagataaaagtttgtcttttttgctta 643  Q
    ||||| |||||||||||||||||||||||||||||    
T  6110376 tcttggaaaagataaaagtttgtcttttttgctta 6110410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 466 - 528
Target Start/End: Complemental strand, 20380251 - 20380189
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    |||||||||| |||| |||||| || |||||||||||||| ||||||||| ||  ||||||||    
T  20380251 atagttttttgtgttatctttgaaataagttttataggaaaatgtaaaaaaaaaattcattgg 20380189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 522
Target Start/End: Original strand, 30421237 - 30421270
Alignment:
Q  489 aaaaagttttataggaagatgtaaaaacaatttt 522  Q
    ||||||||||||| ||||||||||||||||||||    
T  30421237 aaaaagttttataagaagatgtaaaaacaatttt 30421270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 495 - 527
Target Start/End: Complemental strand, 44442230 - 44442198
Alignment:
Q  495 ttttataggaagatgtaaaaacaattttcattg 527  Q
    ||||||| |||||||||||||||||||||||||    
T  44442230 ttttatatgaagatgtaaaaacaattttcattg 44442198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 8e-35; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 20281725 - 20281642
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20281725 tttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 20281642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 47868013 - 47867930
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47868013 tttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 47867930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 2229381 - 2229298
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  2229381 tttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatttttattggctattggttatgg 2229298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 4058849 - 4058766
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  4058849 tttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcattggttattggttatgg 4058766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 7654751 - 7654668
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  7654751 tttggagtatagttttttgtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattgattatgg 7654668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 55580804 - 55580721
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  55580804 tttggagtatagttttttttgttttctttggaaaaagttgtataggaagatgtaaaaacaattttcattggctattagttatgg 55580721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 26916459 - 26916376
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26916459 tttggagtatggttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaatttttattggctattggttatgg 26916376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 463 - 541
Target Start/End: Original strand, 16604869 - 16604947
Alignment:
Q  463 agtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  16604869 agtatagttttttgtgttttctttgaaaaaagttttataggaagatgttaaaacaattttcattggctattagttatgg 16604947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 463 - 541
Target Start/End: Original strand, 56318093 - 56318171
Alignment:
Q  463 agtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  56318093 agtatggttttttgtgttttctttggaaaaaggtttataggaagatgtaaaaacaattttcattagctattggttatgg 56318171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 458 - 539
Target Start/End: Complemental strand, 39078290 - 39078210
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    |||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  39078290 tttggagtatagttttttgtgttttctttggaaaaagttttata-gaagatgtaaaaacaattttcattggctattagttat 39078210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 463 - 540
Target Start/End: Original strand, 41414634 - 41414711
Alignment:
Q  463 agtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatg 540  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  41414634 agtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaatttttattggctattgattatg 41414711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 10069831 - 10069748
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| | ||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10069831 tttgtagtatagttttttgtattttcttcgaaaaaagttttatagaaagatgtaaaaacaattttcattggctattggttatgg 10069748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 469 - 540
Target Start/End: Complemental strand, 14332883 - 14332812
Alignment:
Q  469 gttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatg 540  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  14332883 gttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatttttattggccattggttatg 14332812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 17794559 - 17794642
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||||||||||||  |||||||||| || || |||||||||||||||||||||||||||||||||||||||| ||||||    
T  17794559 tttgaagtatagttttttgcgttttctttgaaataaattttataggaagatgtaaaaacaattttcattggctattgattatgg 17794642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 24940499 - 24940416
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||    
T  24940499 tttggagtatagttttttgtattttctttggaaaaagttttataagaagatgtaaaaacaattttcgttggttattggttatgg 24940416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 5483296 - 5483379
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||||| |||||| ||||||||||  || |||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  5483296 tttgaagtataattttttgtgttttctttaaaataagtttaataggaagatgtaaaaacaattttcattggctactggttatgg 5483379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 20716314 - 20716231
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| |||||||| ||||   |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  20716314 tttggagtatagtcttttgacttttgtttggaaaaagttttatagaaagatgtaaaaacaattttcattggctattggttatgg 20716231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 29203640 - 29203557
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| |||||| |||||| ||||||||||| |||   |||||||||||||||||||||||||||||||||||||||||||||||    
T  29203640 tttggagtataattttttgtgttttctttgcaaatttttttataggaagatgtaaaaacaattttcattggctattggttatgg 29203557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 462 - 540
Target Start/End: Original strand, 28669023 - 28669101
Alignment:
Q  462 aagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatg 540  Q
    |||||||||||||| |||||||||| ||||| |||||||||||| |||||||||||||||||||||| |||| ||||||    
T  28669023 aagtatagttttttgtgttttctttagaaaaggttttataggaaaatgtaaaaacaattttcattggttattagttatg 28669101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 462 - 534
Target Start/End: Original strand, 21722704 - 21722776
Alignment:
Q  462 aagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattg 534  Q
    ||||||||| |||||||||||||||| || |||||||||||||||||||||||| ||||||||||| ||||||    
T  21722704 aagtatagtgttttatgttttctttgtaataagttttataggaagatgtaaaaataattttcattgactattg 21722776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 466 - 541
Target Start/End: Original strand, 35310768 - 35310843
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||||||| |||||||||| ||| |||||| || | ||||||||||||||||||||||||||||||||||||||    
T  35310768 atagttttttgtgttttctttagaataagtttcatggaaagatgtaaaaacaattttcattggctattggttatgg 35310843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 466 - 541
Target Start/End: Complemental strand, 42915656 - 42915581
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||||||| |||||||||||||| |||||| || | |||||||||||||||||||||||||| |||||||||||    
T  42915656 atagttttttgtgttttctttggaataagtttcatggaaagatgtaaaaacaattttcattggcaattggttatgg 42915581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 472 - 540
Target Start/End: Original strand, 48793660 - 48793728
Alignment:
Q  472 ttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatg 540  Q
    |||| |||||||||||||| |||||| || |||||||||||||||||||||||||||| ||||||||||    
T  48793660 ttttgtgttttctttggaataagtttcatgggaagatgtaaaaacaattttcattggcaattggttatg 48793728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 465 - 539
Target Start/End: Original strand, 47516216 - 47516290
Alignment:
Q  465 tatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    ||||||||||| |||| |||||| || |||||||||||||||| |||||||||||||||||||| | ||||||||    
T  47516216 tatagttttttgtgttatctttgaaataagttttataggaagaagtaaaaacaattttcattggttgttggttat 47516290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 471 - 539
Target Start/End: Original strand, 46070553 - 46070621
Alignment:
Q  471 tttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    ||||| |||| |||||| || ||||||||||||||||||||||||||||||||||||| | ||||||||    
T  46070553 tttttgtgttgtctttgaaataagttttataggaagatgtaaaaacaattttcattggttgttggttat 46070621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 466 - 541
Target Start/End: Original strand, 8683332 - 8683407
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||||||| |||||||||||||| |||||| || | || ||||||||| ||||||||||||| |||||||||||    
T  8683332 atagttttttgtgttttctttggaataagtttcatggaaatatgtaaaaataattttcattggcaattggttatgg 8683407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 463 - 541
Target Start/End: Complemental strand, 5815598 - 5815520
Alignment:
Q  463 agtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||||||| ||||||||||| || |||||||||  ||||||||||||| |||||| |||| |||||| ||||||    
T  5815598 agtatagttttttgtgttttctttgaaataagttttatgagaagatgtaaaaataatttttattgactattgattatgg 5815520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 458 - 512
Target Start/End: Complemental strand, 16473882 - 16473828
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaa 512  Q
    |||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  16473882 tttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaa 16473828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 480 - 534
Target Start/End: Complemental strand, 50145848 - 50145794
Alignment:
Q  480 tttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattg 534  Q
    ||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||    
T  50145848 tttctttggaataagttttatgggaagatgtaaacacaattttcattggctattg 50145794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 466 - 527
Target Start/End: Complemental strand, 29511551 - 29511490
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 527  Q
    |||||||||| |||| |||||  || ||||||||||||||||||||||||||||||||||||    
T  29511551 atagttttttgtgttatctttaaaataagttttataggaagatgtaaaaacaattttcattg 29511490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 458 - 527
Target Start/End: Original strand, 32323280 - 32323349
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 527  Q
    |||||||||| ||||||| ||||||||||  || ||| ||||| ||||||||||||||||||||||||||    
T  32323280 tttgaagtattgttttttgtgttttctttaaaataagatttatgggaagatgtaaaaacaattttcattg 32323349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 466 - 541
Target Start/End: Original strand, 17186822 - 17186896
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||||||| | ||||||||| |||   ||||||||||||||||||||| || ||||||||||||||||||||||    
T  17186822 atagttttttgtattttctttg-aaatttttttataggaagatgtaaaaataagtttcattggctattggttatgg 17186896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 468 - 527
Target Start/End: Complemental strand, 32410452 - 32410393
Alignment:
Q  468 agttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 527  Q
    |||||||| |||| |||||| || |||||||||||||||||||||||| |||||||||||    
T  32410452 agttttttgtgttatctttgaaataagttttataggaagatgtaaaaataattttcattg 32410393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 462 - 528
Target Start/End: Complemental strand, 32203343 - 32203277
Alignment:
Q  462 aagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    |||||||||||||| |  |||||||| || ||||||||| ||||||| |||||||||||||||||||    
T  32203343 aagtatagttttttgttgtttctttgaaataagttttatgggaagatataaaaacaattttcattgg 32203277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 482 - 528
Target Start/End: Complemental strand, 49080367 - 49080321
Alignment:
Q  482 tctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    |||||| || |||||||||||||||||||||||||||||||||||||    
T  49080367 tctttgaaataagttttataggaagatgtaaaaacaattttcattgg 49080321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 466 - 539
Target Start/End: Original strand, 5841805 - 5841878
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    ||||||| || |||| || ||| || || ||||||||||||||||||||| |||||||||||| ||||||||||    
T  5841805 atagtttcttgtgttatccttgaaataaattttataggaagatgtaaaaataattttcattggttattggttat 5841878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 470 - 526
Target Start/End: Original strand, 5064685 - 5064741
Alignment:
Q  470 ttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 526  Q
    |||||| |||| |||||| || |||||||| ||||||||||||||||||||||||||    
T  5064685 ttttttgtgttatctttgaaataagttttaaaggaagatgtaaaaacaattttcatt 5064741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 493 - 541
Target Start/End: Original strand, 17799187 - 17799235
Alignment:
Q  493 agttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  17799187 agttttatgggaagatgtaaaaacaattttcattggttatttgttatgg 17799235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 463 - 534
Target Start/End: Complemental strand, 31280318 - 31280253
Alignment:
Q  463 agtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattg 534  Q
    ||||||||||||| |||||||||||||| |||||||||      ||||||||| ||||||||||||||||||    
T  31280318 agtatagttttttgtgttttctttggaataagttttat------atgtaaaaataattttcattggctattg 31280253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 466 - 528
Target Start/End: Original strand, 28318445 - 28318505
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    |||||||||| |||| |||||| || ||  |||||||||||||||||||||||||||||||||    
T  28318445 atagttttttgtgttatctttgaaataa--tttataggaagatgtaaaaacaattttcattgg 28318505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 477 - 539
Target Start/End: Original strand, 8178276 - 8178338
Alignment:
Q  477 tgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    |||| |||||| || |||||||||| |||||||||||||||||||  ||||| ||||||||||    
T  8178276 tgttatctttgaaataagttttataagaagatgtaaaaacaatttgtattggttattggttat 8178338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 528
Target Start/End: Original strand, 23978169 - 23978203
Alignment:
Q  494 gttttataggaagatgtaaaaacaattttcattgg 528  Q
    |||||||||||||||||||||||||||||||||||    
T  23978169 gttttataggaagatgtaaaaacaattttcattgg 23978203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 479 - 541
Target Start/End: Original strand, 25297261 - 25297323
Alignment:
Q  479 ttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| |||| || |||||| || | ||||||||||||||||||||||||||||||| ||||||    
T  25297261 ttttttttgtaataagtttcatggaaagatgtaaaaacaattttcattggctattgattatgg 25297323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 470 - 528
Target Start/End: Original strand, 28142652 - 28142710
Alignment:
Q  470 ttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    |||||| |||| |||||  || ||||||||||||| |||||||||||||||||||||||    
T  28142652 ttttttgtgttatctttaaaataagttttataggaggatgtaaaaacaattttcattgg 28142710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 466 - 528
Target Start/End: Complemental strand, 37912010 - 37911948
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    |||||||||| |||| |||||  || ||||||||||| || ||||||||||||||||||||||    
T  37912010 atagttttttgtgttatctttaaaataagttttatagaaatatgtaaaaacaattttcattgg 37911948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 472 - 541
Target Start/End: Original strand, 1585379 - 1585448
Alignment:
Q  472 ttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||| || |||||| || | ||||||| ||||||||||| ||||||||||| ||||||    
T  1585379 ttttgtgttttctttgaaataagtttcatggaaagatgttaaaacaatttttattggctattgattatgg 1585448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 504 - 541
Target Start/End: Complemental strand, 35529760 - 35529723
Alignment:
Q  504 aagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  35529760 aagatgtaaaaacaattttcattgggtattggttatgg 35529723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 540
Target Start/End: Complemental strand, 19351963 - 19351899
Alignment:
Q  477 tgttttctttggaaaaagttttataggaagatgt-aaaaacaattttcattggctattggttatg 540  Q
    ||||||| ||| || |||||| || ||||||||| ||||||||||||||||||||||| ||||||    
T  19351963 tgttttcattgaaataagtttcatgggaagatgttaaaaacaattttcattggctattagttatg 19351899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 465 - 528
Target Start/End: Complemental strand, 50768567 - 50768504
Alignment:
Q  465 tatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    |||| |||||| ||||||| |||||| |||||| || | |||||||||||| ||||||||||||    
T  50768567 tataattttttgtgttttccttggaataagtttcatggaaagatgtaaaaataattttcattgg 50768504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 609 - 643
Target Start/End: Complemental strand, 7654610 - 7654576
Alignment:
Q  609 tcttgaaaaagataaaagtttgtcttttttgctta 643  Q
    ||||| |||||||||||||||||||||||||||||    
T  7654610 tcttggaaaagataaaagtttgtcttttttgctta 7654576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 479 - 541
Target Start/End: Original strand, 12002679 - 12002741
Alignment:
Q  479 ttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| |||||||  ||||| || | ||||||||||||||||||| |||||| |||||||||||    
T  12002679 ttttttttggaattagtttcatggaaagatgtaaaaacaatttttattggccattggttatgg 12002741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 609 - 643
Target Start/End: Complemental strand, 14332742 - 14332708
Alignment:
Q  609 tcttgaaaaagataaaagtttgtcttttttgctta 643  Q
    ||||| |||||||||||||||||||||||||||||    
T  14332742 tcttggaaaagataaaagtttgtcttttttgctta 14332708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 458 - 528
Target Start/End: Original strand, 29180403 - 29180473
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    ||||| ||||| |||||| |||| || |||||| |||||| |||| |||||||||||| |||| |||||||    
T  29180403 tttgaggtataattttttgtgttctccttggaataagtttcatagaaagatgtaaaaataattctcattgg 29180473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 458 - 528
Target Start/End: Complemental strand, 29899844 - 29899774
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    ||||| ||||| |||||| |||| || |||||| ||||||||| | |||||||||||| |||| |||||||    
T  29899844 tttgaggtataattttttgtgttctccttggaataagttttatggaaagatgtaaaaataattctcattgg 29899774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 458 - 528
Target Start/End: Original strand, 30011945 - 30012015
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    ||||| ||||| |||||| |||| | ||||||| |||||| || | ||||||||||||||||| |||||||    
T  30011945 tttgaggtataattttttgtgttatttttggaataagtttcatggaaagatgtaaaaacaattatcattgg 30012015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 494 - 528
Target Start/End: Complemental strand, 40411199 - 40411165
Alignment:
Q  494 gttttataggaagatgtaaaaacaattttcattgg 528  Q
    ||||||||||||||||||||||||||||| |||||    
T  40411199 gttttataggaagatgtaaaaacaatttttattgg 40411165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 609 - 643
Target Start/End: Original strand, 41414778 - 41414812
Alignment:
Q  609 tcttgaaaaagataaaagtttgtcttttttgctta 643  Q
    |||||||||||||||||||||||||||||| ||||    
T  41414778 tcttgaaaaagataaaagtttgtcttttttactta 41414812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 609 - 643
Target Start/End: Complemental strand, 47867862 - 47867828
Alignment:
Q  609 tcttgaaaaagataaaagtttgtcttttttgctta 643  Q
    ||||||||||||||||||||| |||||||||||||    
T  47867862 tcttgaaaaagataaaagtttttcttttttgctta 47867828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 492 - 541
Target Start/End: Complemental strand, 40553869 - 40553820
Alignment:
Q  492 aagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||| |||| ||||||||||||||| ||||||||| |||| |||||||    
T  40553869 aagtttcatagaaagatgtaaaaacaagtttcattggttattagttatgg 40553820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 615 - 643
Target Start/End: Complemental strand, 2229224 - 2229196
Alignment:
Q  615 aaaagataaaagtttgtcttttttgctta 643  Q
    |||||||||||||||||||||||||||||    
T  2229224 aaaagataaaagtttgtcttttttgctta 2229196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 466 - 534
Target Start/End: Complemental strand, 53848586 - 53848518
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattg 534  Q
    ||||||| || |||| || ||| || || ||||||||||||| |||||||||||||| ||||| |||||    
T  53848586 atagtttcttgtgttatccttgaaataatttttataggaagacgtaaaaacaattttaattggttattg 53848518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 5e-33; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 465 - 541
Target Start/End: Complemental strand, 2126167 - 2126091
Alignment:
Q  465 tatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2126167 tatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 2126091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 11241163 - 11241080
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  11241163 tttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaccaattttcattggctattggttatgg 11241080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 6786974 - 6786891
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  6786974 tttggagtatagttttttgtgttttctttggaaaaagttttatatgaagatgtaaacacaattttcattggctattggttatgg 6786891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 12448992 - 12449075
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  12448992 tttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcattggccattggttatgg 12449075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 15959665 - 15959748
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| |||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15959665 tttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 15959748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 24190605 - 24190522
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  24190605 tttggagtatagttttttgtgttttctttggaaaaagttttatacggagatgtaaaaacaattttcattggctattggttatgg 24190522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 42965841 - 42965923
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  42965841 tttgaagtttagttttttgtgttttctttggaaaaa-ttttataggaagatgtaaaaacaattttcattggctattggttatgg 42965923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 463 - 541
Target Start/End: Complemental strand, 6785587 - 6785509
Alignment:
Q  463 agtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6785587 agtatagttttttgtgttttcttttgaaaaagttttatatgaagatgtaaaaacaattttcattggctattggttatgg 6785509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 32624030 - 32624113
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  32624030 tttggagtgtagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcattggccattggttatgg 32624113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 33369686 - 33369604
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  33369686 tttggagtatagttttttgtgttttctttggaaaaagttttatatga-gatgtaaaaacaattttcattggctattggttatgg 33369604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 39555611 - 39555694
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||| ||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  39555611 tttggagtataggtttttgtgttttctttgaaaaaagttttatagaaagatgtaaaaacaattttcattggctattggttatgg 39555694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 463 - 539
Target Start/End: Original strand, 28016776 - 28016852
Alignment:
Q  463 agtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    ||||||||||||  ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  28016776 agtatagtttttggtgttttctttgaaaaatgttttataggaagatgtaaaaacaattttcattggctattggttat 28016852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 35691529 - 35691446
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| |||||| |||||| ||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  35691529 tttggagtataattttttgtgttttctttgaaaaaagttttatagggagatgtaaaaacaatttttattggctattggttatgg 35691446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 462 - 541
Target Start/End: Original strand, 43667332 - 43667411
Alignment:
Q  462 aagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||| |||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  43667332 aagtataattttttgtgttttctttgaaaaaagttttataggaagacgtaaaaacaattttcattggccattggttatgg 43667411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 458 - 540
Target Start/End: Original strand, 3861720 - 3861802
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatg 540  Q
    ||||||||||| ||||||||||||||||| ||| ||||||||| | ||||||||||||||||||||||||||||||| |||||    
T  3861720 tttgaagtataattttttatgttttctttagaataagttttattgaaagatgtaaaaacaattttcattggctattgattatg 3861802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 461 - 541
Target Start/End: Original strand, 32983200 - 32983278
Alignment:
Q  461 gaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||    
T  32983200 gaagtatagttttttgtgttttctttggaaaa-gttttataagaagatgtaaaaacaattttcattggc-attggttatgg 32983278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 466 - 541
Target Start/End: Original strand, 44148869 - 44148944
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||||||| |||||||||||||| |||||| || |||||||||||||||||||||||||||| |||||||||||    
T  44148869 atagttttttgtgttttctttggaataagtttcatgggaagatgtaaaaacaattttcattggcaattggttatgg 44148944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 462 - 541
Target Start/End: Original strand, 46818531 - 46818610
Alignment:
Q  462 aagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||||||||||| | ||||||||| |||||||||||||||||||| |||||||||||||||||||||| | |||||||    
T  46818531 aagtatagttttttgtattttctttgaaaaaagttttataggaagatataaaaacaattttcattggctaatagttatgg 46818610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 458 - 536
Target Start/End: Complemental strand, 40718814 - 40718736
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggt 536  Q
    |||| ||||||||||||| ||||||||||| ||||||||||||| |||| |||| ||||||||||||||||||||||||    
T  40718814 tttggagtatagttttttgtgttttctttgaaaaaagttttatatgaagttgtagaaacaattttcattggctattggt 40718736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 463 - 541
Target Start/End: Complemental strand, 45226269 - 45226191
Alignment:
Q  463 agtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||||| | | ||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  45226269 agtatagttttatgtattttctttgaaaaaagttttataggaagacgtaaaaacaattttcattgactattggttatgg 45226191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 467 - 541
Target Start/End: Original strand, 47014525 - 47014599
Alignment:
Q  467 tagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||| ||||||| ||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  47014525 tagttttttgtgttttcgttgaaaaaagttttataggaaaatgtaaaaacaattttcattgactattggttatgg 47014599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 458 - 534
Target Start/End: Original strand, 7467987 - 7468064
Alignment:
Q  458 tttgaagta-tagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattg 534  Q
    ||||||||| || |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  7467987 tttgaagtaataattttttgtgttttctttggaaaaagttttaaaggaagatgtaaatacaattttcattggctattg 7468064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 458 - 534
Target Start/End: Complemental strand, 52985069 - 52984993
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattg 534  Q
    |||| ||||||||||||| |||||||||||||| |||||| |  |||||||||||||||||||||||||||||||||    
T  52985069 tttggagtatagttttttgtgttttctttggaataagtttcacgggaagatgtaaaaacaattttcattggctattg 52984993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 466 - 541
Target Start/End: Complemental strand, 3076423 - 3076348
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||||||| |||||| ||||||| ||||||||| |||||||||||||| ||||||||||||| |||||||||||    
T  3076423 atagttttttgtgttttatttggaataagttttatgggaagatgtaaaaataattttcattggcaattggttatgg 3076348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 458 - 537
Target Start/End: Complemental strand, 46543118 - 46543039
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggtt 537  Q
    |||| ||||||||||||| ||||||||||| |||||  |||||||||||||| ||||||||||| |||||||||||||||    
T  46543118 tttggagtatagttttttgtgttttctttgaaaaaaaatttataggaagatgaaaaaacaatttccattggctattggtt 46543039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 463 - 533
Target Start/End: Original strand, 2246044 - 2246114
Alignment:
Q  463 agtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctatt 533  Q
    ||||||||||||| ||||||||||| || |||||||||||||| ||||||||| |||||||||||||||||    
T  2246044 agtatagttttttgtgttttctttgaaataagttttataggaatatgtaaaaagaattttcattggctatt 2246114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 466 - 539
Target Start/End: Complemental strand, 16688264 - 16688191
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    ||||||||||||||| | |||| || ||||||||||||||||||||||||||||||||||||| | ||||||||    
T  16688264 atagttttttatgttatttttgaaataagttttataggaagatgtaaaaacaattttcattggttgttggttat 16688191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 466 - 539
Target Start/End: Complemental strand, 33431687 - 33431614
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    |||||||||| |||||| |||  |||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  33431687 atagttttttgtgtttttttttaaaaaagttttataggaggatggaaaaacaattttcattggctattggttat 33431614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 460 - 541
Target Start/End: Original strand, 37735410 - 37735491
Alignment:
Q  460 tgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||||||||||||| | |||||||||||| |||||| || |||||| |||||||||||||| ||||||||||| ||||||    
T  37735410 tgaagtatagttttttgtattttctttggaataagtttcatgggaagaagtaaaaacaatttttattggctattgattatgg 37735491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 477 - 541
Target Start/End: Original strand, 10558800 - 10558864
Alignment:
Q  477 tgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||| ||||||    
T  10558800 tgttttctttggaataatttttatgggaagatgtaaaaacaattttcattggctattgattatgg 10558864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 13136579 - 13136661
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| ||||||||||  |||||  || ||||||||||||||||||||||| |||||||||||||||||||    
T  13136579 tttggagtatagttttttgtgttttctttaaaaaaaaatt-ataggaagatgtaaaaacaatttccattggctattggttatgg 13136661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 458 - 540
Target Start/End: Complemental strand, 43765431 - 43765348
Alignment:
Q  458 tttgaagtatagtttttta-tgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatg 540  Q
    |||| |||||||||||||  |||||||||| ||| |||||||||||||||||||||||||| |||||||||| |||| ||||||    
T  43765431 tttgtagtatagtttttttgtgttttctttagaataagttttataggaagatgtaaaaacatttttcattggttatttgttatg 43765348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 489 - 540
Target Start/End: Original strand, 47600095 - 47600146
Alignment:
Q  489 aaaaagttttataggaagatgtaaaaacaattttcattggctattggttatg 540  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  47600095 aaaaagttttataggaagatgtaaaaacaattttcattggctattgtttatg 47600146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 466 - 539
Target Start/End: Original strand, 5858404 - 5858477
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    ||||||| || |||| || ||| || ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  5858404 atagtttcttgtgttatccttgaaataagttttataggaagatataaaaacaattttcattggctattggttat 5858477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 484 - 540
Target Start/End: Complemental strand, 50370071 - 50370015
Alignment:
Q  484 tttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatg 540  Q
    |||| |||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  50370071 tttgaaaaaagttttataggaagatgtaaaaacaatttctattggctattggttatg 50370015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 458 - 532
Target Start/End: Original strand, 3875044 - 3875116
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctat 532  Q
    |||||||||||||||| |  ||||| ||| |||||||||||||||||| |||||||||||||||| |||||||||    
T  3875044 tttgaagtatagttttgt--gtttttttttgaaaaagttttataggaatatgtaaaaacaatttttattggctat 3875116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 470 - 541
Target Start/End: Original strand, 24728664 - 24728735
Alignment:
Q  470 ttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||| |||||||||| ||| |||||| || |||||||||||||||||||||||||||| |||| ||||||    
T  24728664 ttttttgtgttttctttcgaataagtttcatgggaagatgtaaaaacaattttcattggcaattgattatgg 24728735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 25391817 - 25391735
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||||| |||||| |||||||||| || || |||||||| ||| ||||||||||||||||||||||||| | |||||||    
T  25391817 tttgaagtataattttttgtgttttctttagataa-gttttatatgaaaatgtaaaaacaattttcattggctaatagttatgg 25391735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 39932597 - 39932680
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| |||||| |||  || |||||||||| |||||| ||||||||||||| ||||||||||||| ||||    
T  39932597 tttggagtatagttttttgtgttttttttttaataagttttataagaagatataaaaacaatttttattggctattggtcatgg 39932680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 466 - 528
Target Start/End: Complemental strand, 7397834 - 7397772
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    |||||||||| |||| |||||| || || ||||||||||||||||||||||||||||||||||    
T  7397834 atagttttttgtgttatctttgaaataaattttataggaagatgtaaaaacaattttcattgg 7397772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 463 - 541
Target Start/End: Original strand, 28120785 - 28120863
Alignment:
Q  463 agtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||||||| |||||| |||  ||  | |||||| ||||||||||||||||||||||||||||||||| ||||||    
T  28120785 agtatagttttttgtgttttttttaaaatgaattttatgggaagatgtaaaaacaattttcattggctattgattatgg 28120863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 466 - 539
Target Start/End: Complemental strand, 5950567 - 5950494
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    ||||||| || |||| || ||| || |||||||||||||||||||||||||||||||||||||  |||||||||    
T  5950567 atagtttcttgtgttatccttgaaataagttttataggaagatgtaaaaacaattttcattggtcattggttat 5950494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 465 - 534
Target Start/End: Original strand, 8889729 - 8889798
Alignment:
Q  465 tatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattg 534  Q
    |||||||| || |||| || ||| || ||||||||||||||||||||||||||||||||||||| |||||    
T  8889729 tatagtttattgtgttatccttgaaataagttttataggaagatgtaaaaacaattttcattggttattg 8889798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 484 - 541
Target Start/End: Complemental strand, 16854250 - 16854193
Alignment:
Q  484 tttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| |||||||||||| ||||| ||||||||||||||| ||||||||||||||||||    
T  16854250 tttgaaaaaagttttattggaaggtgtaaaaacaatttttattggctattggttatgg 16854193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 492 - 541
Target Start/End: Original strand, 32318619 - 32318668
Alignment:
Q  492 aagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  32318619 aagttttattggaagatgtaaaaacaattttcattggttattggttatgg 32318668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 493 - 541
Target Start/End: Original strand, 6787050 - 6787098
Alignment:
Q  493 agttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  6787050 agttttataggaagatgtaaaaataatttttattggctattggttatgg 6787098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 465 - 541
Target Start/End: Complemental strand, 30221854 - 30221778
Alignment:
Q  465 tatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| |||||| ||||||||||  || ||||||||| |||||||||||||||| |||| ||||| ||||||||||||    
T  30221854 tataattttttgtgttttctttaaaataagttttatgggaagatgtaaaaacattttttattggatattggttatgg 30221778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 489 - 528
Target Start/End: Complemental strand, 13351785 - 13351746
Alignment:
Q  489 aaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  13351785 aaaaagttttataggaagatgtaaaaacaattttcattgg 13351746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 478 - 541
Target Start/End: Original strand, 23392211 - 23392274
Alignment:
Q  478 gttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||||||| ||||||||||| || || |||||| ||||||||||| |||||||||||||    
T  23392211 gttttctttggaataagttttatagaaaaatataaaaataattttcattgactattggttatgg 23392274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 472 - 538
Target Start/End: Complemental strand, 1034979 - 1034913
Alignment:
Q  472 ttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggtta 538  Q
    |||| |||||||||||||| |||||||||  |||||| |||||||||||||||| | ||||||||||    
T  1034979 ttttgtgttttctttggaataagttttatgagaagatataaaaacaattttcatcgactattggtta 1034913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 466 - 528
Target Start/End: Complemental strand, 50176650 - 50176588
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    |||||||||| |||| |||||| || || |||||||||||||||||||||||||||| |||||    
T  50176650 atagttttttgtgttatctttgaaataaattttataggaagatgtaaaaacaatttttattgg 50176588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 466 - 539
Target Start/End: Complemental strand, 37538937 - 37538864
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    ||||||| || |||| || ||| || |||||||||||||||||||||| |||||||||||||| | ||||||||    
T  37538937 atagtttcttgtgttatccttgaaataagttttataggaagatgtaaagacaattttcattggttgttggttat 37538864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 540
Target Start/End: Complemental strand, 1820524 - 1820469
Alignment:
Q  484 tttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatg 540  Q
    |||||||||||||||||||||||||||||||| ||| |||||| ||| |||||||||    
T  1820524 tttggaaaaagttttataggaagatgtaaaaa-aatattcattagcttttggttatg 1820469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 492 - 527
Target Start/End: Complemental strand, 15912300 - 15912265
Alignment:
Q  492 aagttttataggaagatgtaaaaacaattttcattg 527  Q
    ||||||||||||||||||||||||||||||||||||    
T  15912300 aagttttataggaagatgtaaaaacaattttcattg 15912265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 463 - 526
Target Start/End: Original strand, 32742232 - 32742295
Alignment:
Q  463 agtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 526  Q
    ||||||||||||| ||||||||||  |||||||||||||  || || |||||||||||||||||    
T  32742232 agtatagttttttgtgttttctttaaaaaaagttttataaaaaaatataaaaacaattttcatt 32742295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 541
Target Start/End: Original strand, 298696 - 298777
Alignment:
Q  459 ttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||||||||  | |||||||||| ||| |||||| || ||||||||||||||  ||||| ||||||||||| ||||||    
T  298696 ttgaagtatagtttgatgtgttttctttagaataagttt-atgggaagatgtaaaaattattttaattggctattgattatgg 298777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 470 - 528
Target Start/End: Original strand, 25185341 - 25185399
Alignment:
Q  470 ttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    |||||| |||| |||||| || ||||||||||||||||||| ||||||| |||||||||    
T  25185341 ttttttgtgttatctttgaaataagttttataggaagatgtgaaaacaactttcattgg 25185399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 470 - 528
Target Start/End: Original strand, 30701422 - 30701480
Alignment:
Q  470 ttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    |||||| |||| |||||| || ||||||||||||||||||| |||| ||||||||||||    
T  30701422 ttttttgtgttatctttgaaataagttttataggaagatgtgaaaataattttcattgg 30701480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 609 - 643
Target Start/End: Original strand, 43667476 - 43667510
Alignment:
Q  609 tcttgaaaaagataaaagtttgtcttttttgctta 643  Q
    |||||||||||||||||||||||||||||||||||    
T  43667476 tcttgaaaaagataaaagtttgtcttttttgctta 43667510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 466 - 539
Target Start/End: Original strand, 35366236 - 35366309
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    ||||||| || |||| || ||| || || |||||||| ||||||||||||||||||| ||||| ||||||||||    
T  35366236 atagtttcttgtgttatcgttgaaataaattttatagaaagatgtaaaaacaattttaattggttattggttat 35366309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 466 - 527
Target Start/End: Original strand, 44510252 - 44510313
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 527  Q
    |||||||||| |||| | |||| || || |||||||||||| ||||||||||||||||||||    
T  44510252 atagttttttgtgttatttttgaaataaattttataggaagttgtaaaaacaattttcattg 44510313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 472 - 540
Target Start/End: Original strand, 47302945 - 47303012
Alignment:
Q  472 ttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatg 540  Q
    |||| |||||| || |||| |||||| |||||||||||| |||| |||||||||||||||||| |||||    
T  47302945 ttttgtgtttttttaggaataagtttcataggaagatgt-aaaataattttcattggctattgattatg 47303012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 495 - 541
Target Start/End: Original strand, 7876004 - 7876050
Alignment:
Q  495 ttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||||| |||||||||||| |||||| |||| |||||||||||||    
T  7876004 ttttatagaaagatgtaaaaataatttttattgactattggttatgg 7876050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 609 - 643
Target Start/End: Original strand, 12449143 - 12449177
Alignment:
Q  609 tcttgaaaaagataaaagtttgtcttttttgctta 643  Q
    ||||| |||||||||||||||||||||||||||||    
T  12449143 tcttggaaaagataaaagtttgtcttttttgctta 12449177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 458 - 528
Target Start/End: Original strand, 23873855 - 23873925
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    ||||| ||||| |||||| |||| || |||||| |||||| || | |||||||||||| ||||||||||||    
T  23873855 tttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattttcattgg 23873925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 609 - 643
Target Start/End: Original strand, 32624182 - 32624216
Alignment:
Q  609 tcttgaaaaagataaaagtttgtcttttttgctta 643  Q
    ||||| |||||||||||||||||||||||||||||    
T  32624182 tcttggaaaagataaaagtttgtcttttttgctta 32624216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 458 - 528
Target Start/End: Original strand, 38942469 - 38942539
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    ||||| ||||| |||||| |||| || |||||| |||||| || | |||||||||||| ||||||||||||    
T  38942469 tttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattttcattgg 38942539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 609 - 643
Target Start/End: Original strand, 39555762 - 39555796
Alignment:
Q  609 tcttgaaaaagataaaagtttgtcttttttgctta 643  Q
    ||||| |||||||||||||||||||||||||||||    
T  39555762 tcttggaaaagataaaagtttgtcttttttgctta 39555796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 466 - 528
Target Start/End: Original strand, 45840099 - 45840160
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    |||||||||| |||| | |||| || | |||||||||||||||| ||||||||||||||||||    
T  45840099 atagttttttgtgttatttttgaaatatgttttataggaagatg-aaaaacaattttcattgg 45840160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 378 - 412
Target Start/End: Original strand, 47014436 - 47014470
Alignment:
Q  378 aaaaaatactactttctccgtcccaaattataagc 412  Q
    |||||||| ||||||||||||||||||||||||||    
T  47014436 aaaaaatagtactttctccgtcccaaattataagc 47014470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 477 - 539
Target Start/End: Original strand, 51338941 - 51339003
Alignment:
Q  477 tgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    |||| |||||| || |||||| |||| ||||||||||| ||||||||||||| |||| |||||    
T  51338941 tgttgtctttgaaataagtttcatagaaagatgtaaaatcaattttcattggttattagttat 51339003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 477 - 539
Target Start/End: Original strand, 51840539 - 51840601
Alignment:
Q  477 tgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    |||| ||||||||| |||||| |||| ||||| ||||| ||||||||||||| |||| |||||    
T  51840539 tgttatctttggaataagtttcatagaaagatataaaatcaattttcattggttattagttat 51840601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 495 - 539
Target Start/End: Complemental strand, 41063840 - 41063796
Alignment:
Q  495 ttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    |||||||| |||||||||||| |||||||||||| |||| |||||    
T  41063840 ttttatagaaagatgtaaaaataattttcattggttatttgttat 41063796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 466 - 522
Target Start/End: Original strand, 46803704 - 46803760
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaatttt 522  Q
    |||||||||| |||| || ||| || |||||| |||| |||||||||||||||||||    
T  46803704 atagttttttgtgttatccttgcaataagtttcatagaaagatgtaaaaacaatttt 46803760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 2e-32; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 34890200 - 34890283
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34890200 tttggagtataattttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 34890283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 463 - 541
Target Start/End: Complemental strand, 36190901 - 36190823
Alignment:
Q  463 agtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36190901 agtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 36190823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 26483666 - 26483583
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  26483666 tttgaagtatagttttttgtgttttctttgaaaaaagttttatagggagatgtaaaaacaattttcattggctattgattatgg 26483583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 7022429 - 7022512
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| ||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  7022429 tttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatataaaaataattttcattggctattggttatgg 7022512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 8712010 - 8711928
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  8712010 tttggagtatagttttttgtgtttt-tttggaaaaagttttataggaagatgtaaaaataattttcattggctattggttatgg 8711928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 31734249 - 31734166
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  31734249 tttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggatatgg 31734166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 43216373 - 43216456
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  43216373 tttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcattcactattggttatgg 43216456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 28348744 - 28348661
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| |||||||| |||| | ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  28348744 tttggagtatagtattttgtattttctttggaaaaagttttataggaatatgtaaaaacaatttccattggctattggttatgg 28348661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 458 - 533
Target Start/End: Original strand, 35456051 - 35456125
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctatt 533  Q
    ||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  35456051 tttgaagtatagttttttatgttttttttg-aaaaagttttatagaaagatgtaaaaacaattttcattggctatt 35456125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 41086412 - 41086495
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||| ||||||||||| ||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||| ||||    
T  41086412 tttgaattatagttttttgtgttttctttgaaaaaagttttatataaagatgtaaaaacaattttcattggctattggtaatgg 41086495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 13143971 - 13144055
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaa-agttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||| | ||||||||||||    
T  13143971 tttggagtatagttttttgtgttttctttgaaaaaaagttttataggaagatgtaaaaacaattttcattagttattggttatgg 13144055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 7858662 - 7858579
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||| | |||| ||||||    
T  7858662 tttggagtatagttttttgtgttttatttgaaaaaagttttataggaagatgtaaaaacaattttcattgaccattgattatgg 7858579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 458 - 537
Target Start/End: Complemental strand, 13143898 - 13143819
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggtt 537  Q
    ||||||||||| |||||| ||||||| ||| ||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  13143898 tttgaagtataattttttgtgttttcgttgaaaaaagtttcataggaagatgtaaaaacaattttcattggctgttggtt 13143819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 463 - 541
Target Start/End: Original strand, 15957942 - 15958020
Alignment:
Q  463 agtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||||||| || ||||||||||| ||||||||||||||||| | |||||||||||||||||| ||||||||||||||    
T  15957942 agtatagtttattgtgttttctttgaaaaaagttttataggaataagtaaaaacaattttcatttgctattggttatgg 15958020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 458 - 540
Target Start/End: Original strand, 16358138 - 16358219
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatg 540  Q
    |||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||| |||||||||||| |||||| |||||    
T  16358138 tttgaagtatagttttttttgttttctttg-aaaaagtttcataggaagatgtaaaatcaattttcattgactattgattatg 16358219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 472 - 541
Target Start/End: Complemental strand, 35525707 - 35525638
Alignment:
Q  472 ttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  35525707 ttttgtgttttctttgaaaaaagttttacaggaagatgtaaaaacaattttcattgactattggttatgg 35525638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 463 - 541
Target Start/End: Complemental strand, 24892970 - 24892889
Alignment:
Q  463 agtatagttttttatgttttctttggaaaaagttttataggaagat---gtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||||||| |||||||||||||||| ||||||||||| |||    ||||||||||||||||||||||||||||||||    
T  24892970 agtatagttttttgtgttttctttggaaaacgttttataggaggatataataaaaacaattttcattggctattggttatgg 24892889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 29920294 - 29920377
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||| | |||||| |||| ||||||||| |||||| || ||||||||||||||||||||||||||||||||| ||||||    
T  29920294 tttgaagtacaattttttgtgttatctttggaataagtttcatgggaagatgtaaaaacaattttcattggctattgattatgg 29920377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 463 - 540
Target Start/End: Original strand, 34158321 - 34158399
Alignment:
Q  463 agtatagttttttatgttttctttggaaaa-agttttataggaagatgtaaaaacaattttcattggctattggttatg 540  Q
    |||||||||| || ||||||||||  |||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  34158321 agtatagtttgttgtgttttctttaaaaaaaagttttataggaagatgtaaaaacaattttcattgactattggttatg 34158399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 30575860 - 30575944
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagtttt-ataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| |||| |||||||| ||||||||||  |||||||||| | ||||| |||||||||||||||||||||||||||||||||||    
T  30575860 tttggagtaaagttttttgtgttttctttaaaaaaagtttttacaggaaaatgtaaaaacaattttcattggctattggttatgg 30575944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 466 - 528
Target Start/End: Original strand, 41362341 - 41362403
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    |||||||||| |||| |||||| || |||||||||||||||||||||||||||||||||||||    
T  41362341 atagttttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattttcattgg 41362403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 8107643 - 8107727
Alignment:
Q  458 tttgaagtatagtttttta-tgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| |||||||||||||  | ||||||||| ||||||||||| |  | ||||||||||||||||||||||||||||||||||||    
T  8107643 tttggagtatagtttttttgtattttctttgaaaaaagttttacaatatgatgtaaaaacaattttcattggctattggttatgg 8107727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 489 - 535
Target Start/End: Complemental strand, 2052937 - 2052891
Alignment:
Q  489 aaaaagttttataggaagatgtaaaaacaattttcattggctattgg 535  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||    
T  2052937 aaaaagttttatgggaagatgtaaaaacaattttcattggctattgg 2052891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 481 - 539
Target Start/End: Original strand, 26954441 - 26954499
Alignment:
Q  481 ttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||| | ||||||||    
T  26954441 ttctttgaaataagttttataggaagatgtaaaaacaattttcattggttgttggttat 26954499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 466 - 539
Target Start/End: Complemental strand, 17713349 - 17713276
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    ||||||| || |||| || ||| || ||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  17713349 atagtttcttgtgttatccttgaaataagttttataggaagatttaaaaacaattttcattggttattggttat 17713276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 16879418 - 16879501
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||||| |||||| ||||||||||| || || ||| || |||| |||||||||||||||| |||| |||||| ||||||    
T  16879418 tttgaagtataattttttgtgttttctttgaaataaatttcatgggaatatgtaaaaacaatttttattgactattgattatgg 16879501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 503 - 541
Target Start/End: Complemental strand, 7499816 - 7499778
Alignment:
Q  503 gaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||||||||||||||||||||||||||||||||||||    
T  7499816 gaagatgtaaaaacaattttcattggctattggttatgg 7499778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 466 - 528
Target Start/End: Complemental strand, 8673507 - 8673445
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    |||||||||| |||| | |||| || |||||||||| ||||||||||||||||||||||||||    
T  8673507 atagttttttgtgttatatttgaaataagttttataagaagatgtaaaaacaattttcattgg 8673445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 458 - 520
Target Start/End: Original strand, 15824663 - 15824725
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaatt 520  Q
    |||||||||||||||||| |||||||||| ||| |||||| || | |||||||||||||||||    
T  15824663 tttgaagtatagttttttgtgttttctttagaataagtttcatggaaagatgtaaaaacaatt 15824725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 466 - 528
Target Start/End: Complemental strand, 17336868 - 17336806
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    |||||||||| |||  |||||| || || ||||||||||||||||||||||||||||||||||    
T  17336868 atagttttttgtgtcatctttgaaataaattttataggaagatgtaaaaacaattttcattgg 17336806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 492 - 528
Target Start/End: Complemental strand, 8745683 - 8745647
Alignment:
Q  492 aagttttataggaagatgtaaaaacaattttcattgg 528  Q
    |||||||||||||||||||||||||||||||||||||    
T  8745683 aagttttataggaagatgtaaaaacaattttcattgg 8745647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 492 - 539
Target Start/End: Original strand, 2628224 - 2628271
Alignment:
Q  492 aagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    |||||||||||||||||||||||| |||||||||||| ||||| ||||    
T  2628224 aagttttataggaagatgtaaaaataattttcattggttattgcttat 2628271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 8709812 - 8709895
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| ||||||||||| || |||| | || |||||| ||||||||| ||||||||| ||||  |||||||    
T  8709812 tttggagtatagttttttgtgttttctttgaaataagtctcatgggaagaagtaaaaacatttttcattgactatatgttatgg 8709895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 609 - 643
Target Start/End: Original strand, 7022580 - 7022614
Alignment:
Q  609 tcttgaaaaagataaaagtttgtcttttttgctta 643  Q
    |||||||||||||||||||||||||||||||||||    
T  7022580 tcttgaaaaagataaaagtttgtcttttttgctta 7022614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 485 - 539
Target Start/End: Complemental strand, 8712631 - 8712577
Alignment:
Q  485 ttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    |||||| ||||||||||| ||||||||||||||||||| ||||| |||| |||||    
T  8712631 ttggaataagttttatagaaagatgtaaaaacaatttttattggttattagttat 8712577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 470 - 528
Target Start/End: Original strand, 25195085 - 25195142
Alignment:
Q  470 ttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    |||||| |||| |||||| || || ||||||||||||||||||||||||||||||||||    
T  25195085 ttttttgtgttatctttgaaataa-ttttataggaagatgtaaaaacaattttcattgg 25195142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 466 - 539
Target Start/End: Original strand, 28497172 - 28497245
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    ||||||| || |||| || ||| || ||||||||| |||||||||||||||||||||||||   ||||||||||    
T  28497172 atagtttcttgtgttatccttgaaataagttttatgggaagatgtaaaaacaattttcattacttattggttat 28497245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 477 - 534
Target Start/End: Original strand, 44663834 - 44663891
Alignment:
Q  477 tgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattg 534  Q
    |||||||||||||| || |||||| | |||||||||||| |||||| |||||||||||    
T  44663834 tgttttctttggaataaattttatggaaagatgtaaaaataatttttattggctattg 44663891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 501 - 541
Target Start/End: Original strand, 3642039 - 3642078
Alignment:
Q  501 aggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  3642039 aggaagatgtaaaaacaatttt-attggctattggttatgg 3642078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 458 - 526
Target Start/End: Complemental strand, 4480909 - 4480841
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 526  Q
    |||| ||||||| ||||| |||| |||||  || ||||||||| |||||||||||||| ||||||||||    
T  4480909 tttggagtataggtttttgtgttatctttaaaataagttttattggaagatgtaaaaataattttcatt 4480841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 471 - 526
Target Start/End: Original strand, 4038920 - 4038975
Alignment:
Q  471 tttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 526  Q
    ||||| |||| | |||| || |||||||||| ||||||||||||||||||||||||    
T  4038920 tttttgtgttatttttgaaataagttttatatgaagatgtaaaaacaattttcatt 4038975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 492 - 527
Target Start/End: Original strand, 33563571 - 33563606
Alignment:
Q  492 aagttttataggaagatgtaaaaacaattttcattg 527  Q
    ||||||||| ||||||||||||||||||||||||||    
T  33563571 aagttttatgggaagatgtaaaaacaattttcattg 33563606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 609 - 643
Target Start/End: Complemental strand, 7858511 - 7858477
Alignment:
Q  609 tcttgaaaaagataaaagtttgtcttttttgctta 643  Q
    ||||| |||||||||||||||||||||||||||||    
T  7858511 tcttggaaaagataaaagtttgtcttttttgctta 7858477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 477 - 527
Target Start/End: Complemental strand, 14693484 - 14693434
Alignment:
Q  477 tgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 527  Q
    |||| |||||| || || ||||||| |||||||||||||||||||||||||    
T  14693484 tgttatctttgaaataaattttataagaagatgtaaaaacaattttcattg 14693434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 466 - 528
Target Start/End: Complemental strand, 38072289 - 38072227
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    |||||||||| |||| |||||| |  ||||||||||  || ||||||||||||||||||||||    
T  38072289 atagttttttgtgttatctttgaattaagttttataaaaaaatgtaaaaacaattttcattgg 38072227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 493 - 534
Target Start/End: Original strand, 14576213 - 14576254
Alignment:
Q  493 agttttataggaagatgtaaaaacaattttcattggctattg 534  Q
    |||||||||| |||||||||||| |||||||||||| |||||    
T  14576213 agttttatagaaagatgtaaaaataattttcattggttattg 14576254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 609 - 638
Target Start/End: Original strand, 41086563 - 41086592
Alignment:
Q  609 tcttgaaaaagataaaagtttgtctttttt 638  Q
    ||||||||||||||||||||||||||||||    
T  41086563 tcttgaaaaagataaaagtttgtctttttt 41086592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 477 - 541
Target Start/End: Original strand, 4046939 - 4047003
Alignment:
Q  477 tgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||||  || |||||| || | || ||||||||| ||||||||||||| |||||||||||    
T  4046939 tgttttctttataataagtttcatggaaatatgtaaaaataattttcattggcaattggttatgg 4047003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 467 - 539
Target Start/End: Complemental strand, 5217517 - 5217445
Alignment:
Q  467 tagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    |||||| || |||| || ||| || |||||| |||| ||||||||||||||||||| ||||| |||| |||||    
T  5217517 tagtttcttgtgttatccttgaaataagtttcatagaaagatgtaaaaacaatttttattggttattagttat 5217445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 2e-32; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 45486091 - 45486008
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  45486091 tttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaataattttcattggctattggttatgg 45486008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 46760281 - 46760364
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46760281 tttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 46760364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 464 - 541
Target Start/End: Original strand, 25737657 - 25737734
Alignment:
Q  464 gtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25737657 gtatagttttgtgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 25737734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 6191181 - 6191098
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6191181 tttggagtatagttttttgtgttttcttttaaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 6191098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 458 - 535
Target Start/End: Original strand, 12632368 - 12632445
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattgg 535  Q
    |||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  12632368 tttggagtatagttttttatgttttctttgaaaaaagtttcataggaagatgtaaaaacaattttcattggctattgg 12632445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 14806005 - 14805923
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14806005 tttggagtatagttttttgtattttctttg-aaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 14805923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 15252999 - 15252917
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15252999 tttggagtatagttttttgtattttctttg-aaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 15252917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 18102666 - 18102583
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| |||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18102666 tttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcattggccattggttatgg 18102583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 19912793 - 19912876
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||    
T  19912793 tttggagtatagttttttgtgttttctttggaaaaagttttatagtaaaatgtaaaaacaattttcattggttattggttatgg 19912876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 20123704 - 20123787
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  20123704 tttggagtatagttttttgtgtattctttggaaaaagttttatagcaagatgtaaaaacaattttcattggctattgcttatgg 20123787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 25944712 - 25944629
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  25944712 tttggagtataagtttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggccattggttatgg 25944629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 35923387 - 35923305
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  35923387 tttggagtatagtttttg-tgttttctttggaaaaagttttatagaaagatgtaaaaacaattttcattggctattggttatgg 35923305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 4910659 - 4910740
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||||||||  ||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  4910659 tttgaagtata--tttttgtgttttctttagaaaaagttttataggaagatgtaaaaataattttcattggctattgattatgg 4910740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 470 - 539
Target Start/End: Original strand, 35068885 - 35068954
Alignment:
Q  470 ttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  35068885 ttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttaattagctattggttat 35068954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 466 - 541
Target Start/End: Complemental strand, 22632217 - 22632142
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||| ||||||||||| || |||||| || ||||||||||||||||||||||||||| ||||||||||||    
T  22632217 atagatttttgtgttttctttgaaataagtttcatgggaagatgtaaaaacaattttcattggatattggttatgg 22632142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 466 - 541
Target Start/End: Complemental strand, 47779732 - 47779657
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||||||| |||||||||| ||| |||||| || |||||||||||||||||||||||||||| | |||||||||    
T  47779732 atagttttttgtgttttctttagaataagtttcatgggaagatgtaaaaacaattttcattggcaactggttatgg 47779657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 489 - 540
Target Start/End: Complemental strand, 9158194 - 9158143
Alignment:
Q  489 aaaaagttttataggaagatgtaaaaacaattttcattggctattggttatg 540  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  9158194 aaaaagttttataggaagatgtaaaaacaattttctttggccattggttatg 9158143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 44683013 - 44682930
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| |||||| | |||| |||||| ||||||| |||||| ||  ||||||||||||||||||||||||| |||||||||||||    
T  44683013 tttggagtataatattttgtgttttttttggaataagtttgatgcgaagatgtaaaaacaattttcattgactattggttatgg 44682930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 467 - 541
Target Start/End: Original strand, 31549936 - 31550010
Alignment:
Q  467 tagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||||||  ||||||||| ||| || |||||||||||||||||||||||| |||||||| | |||||||||||    
T  31549936 tagttttttgcgttttctttagaataaattttataggaagatgtaaaaacaactttcattgacaattggttatgg 31550010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 479 - 540
Target Start/End: Complemental strand, 16917586 - 16917525
Alignment:
Q  479 ttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatg 540  Q
    |||||||||||| |||||| || |||||||||||||||||||||||||  ||||||||||||    
T  16917586 ttttctttggaataagtttcatgggaagatgtaaaaacaattttcattaactattggttatg 16917525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 466 - 527
Target Start/End: Original strand, 31768994 - 31769055
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 527  Q
    |||||||||| |||  |||||| || ||||||||||||||||||||||||||||||||||||    
T  31768994 atagttttttgtgtcatctttgaaataagttttataggaagatgtaaaaacaattttcattg 31769055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 489 - 541
Target Start/End: Complemental strand, 4069108 - 4069056
Alignment:
Q  489 aaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||||||||||| |||||||||||| |||||||||||| ||||||||||||    
T  4069108 aaaaagttttatagaaagatgtaaaaagaattttcattggttattggttatgg 4069056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 458 - 540
Target Start/End: Complemental strand, 14574700 - 14574618
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatg 540  Q
    |||| ||||||||||||| |||||||||   || |||||| || |||||||||||||| ||||| ||||| ||||||||||||    
T  14574700 tttggagtatagttttttgtgttttcttgataataagtttcatgggaagatgtaaaaataatttccattgtctattggttatg 14574618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 458 - 533
Target Start/End: Original strand, 47557623 - 47557700
Alignment:
Q  458 tttgaagtatagttttttatgttttctttgg--aaaaagttttataggaagatgtaaaaacaattttcattggctatt 533  Q
    |||| ||||||||||||| |||||| |||    |||||  ||||||||||||||||||||||||||||||||||||||    
T  47557623 tttggagtatagttttttgtgtttttttttttaaaaaaaatttataggaagatgtaaaaacaattttcattggctatt 47557700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 470 - 526
Target Start/End: Original strand, 35888005 - 35888061
Alignment:
Q  470 ttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 526  Q
    |||||| |||| |||||| || || ||||||||||||||||||||||||||||||||    
T  35888005 ttttttgtgttatctttgaaataacttttataggaagatgtaaaaacaattttcatt 35888061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 2610592 - 2610675
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| |||||| ||||||  | || |||||||| ||  ||||||| |||||||||||||| ||||| |||||||||||||||||    
T  2610592 tttggagtatatttttttgcgcttcctttggaataaaatttatagaaagatgtaaaaacatttttctttggctattggttatgg 2610675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 492 - 539
Target Start/End: Original strand, 24151640 - 24151687
Alignment:
Q  492 aagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    ||||||||||||||||||||||||||||||||| ||  ||||||||||    
T  24151640 aagttttataggaagatgtaaaaacaattttcactgattattggttat 24151687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 458 - 528
Target Start/End: Complemental strand, 9818599 - 9818529
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    ||||| ||||| ||||||||||| || |||||| ||||||||| | |||||||||||| |||| |||||||    
T  9818599 tttgaggtataattttttatgttctccttggaataagttttatggaaagatgtaaaaataattctcattgg 9818529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 458 - 528
Target Start/End: Complemental strand, 10720524 - 10720454
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    ||||| ||||| ||||||||||| || |||||| ||||||||| | |||||||||||| |||| |||||||    
T  10720524 tttgaggtataattttttatgttctccttggaataagttttatggaaagatgtaaaaataattctcattgg 10720454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 609 - 643
Target Start/End: Complemental strand, 18102514 - 18102480
Alignment:
Q  609 tcttgaaaaagataaaagtttgtcttttttgctta 643  Q
    |||||||||||||||||||||||||||||||||||    
T  18102514 tcttgaaaaagataaaagtttgtcttttttgctta 18102480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 492 - 541
Target Start/End: Complemental strand, 48413820 - 48413771
Alignment:
Q  492 aagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||||||  ||||||| ||||||||||||||||| |||||||||||||    
T  48413820 aagttttatgagaagatgcaaaaacaattttcattgactattggttatgg 48413771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 492 - 528
Target Start/End: Complemental strand, 10248630 - 10248594
Alignment:
Q  492 aagttttataggaagatgtaaaaacaattttcattgg 528  Q
    ||||||||||| |||||||||||||||||||||||||    
T  10248630 aagttttatagaaagatgtaaaaacaattttcattgg 10248594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 466 - 526
Target Start/End: Complemental strand, 39170662 - 39170602
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 526  Q
    ||||||| || |||| || ||| || |||||||||| ||||||||||||||||||||||||    
T  39170662 atagtttattgtgttatccttgaaataagttttatacgaagatgtaaaaacaattttcatt 39170602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 493 - 539
Target Start/End: Original strand, 8015732 - 8015778
Alignment:
Q  493 agttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    ||||||||| |||||||||||||||||||| ||||| ||||| ||||    
T  8015732 agttttataagaagatgtaaaaacaatttttattggttattgattat 8015778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 609 - 643
Target Start/End: Complemental strand, 39174235 - 39174201
Alignment:
Q  609 tcttgaaaaagataaaagtttgtcttttttgctta 643  Q
    |||||||||||||||||||||||||||||| ||||    
T  39174235 tcttgaaaaagataaaagtttgtcttttttactta 39174201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 458 - 528
Target Start/End: Complemental strand, 40560513 - 40560443
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    ||||| ||||| |||||| |||| || ||| || ||||||||||| |||||||||||| |||| |||||||    
T  40560513 tttgaggtataattttttgtgttctccttgaaataagttttatagaaagatgtaaaaataattctcattgg 40560443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 458 - 528
Target Start/End: Original strand, 41815676 - 41815746
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    ||||| ||||| |||||| |||| || |||||| ||||||||| | |||||||||||| |||| |||||||    
T  41815676 tttgaggtataattttttgtgttctccttggaataagttttatggaaagatgtaaaaataattctcattgg 41815746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 609 - 643
Target Start/End: Original strand, 47557922 - 47557956
Alignment:
Q  609 tcttgaaaaagataaaagtttgtcttttttgctta 643  Q
    |||||||||| ||||||||||||||||||||||||    
T  47557922 tcttgaaaaacataaaagtttgtcttttttgctta 47557956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 458 - 528
Target Start/End: Complemental strand, 48879519 - 48879449
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    ||||| ||||| |||||| | || || |||||| ||||||||||| |||||||||||| |||| |||||||    
T  48879519 tttgaggtataattttttgtattctccttggaataagttttatagaaagatgtaaaaataattctcattgg 48879449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 533
Target Start/End: Complemental strand, 38260445 - 38260377
Alignment:
Q  465 tatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctatt 533  Q
    ||||||||||| |||| |  ||| || ||||||||||| ||| |||||||| |||||||||||| ||||    
T  38260445 tatagttttttgtgttattcttgaaataagttttatagaaagttgtaaaaataattttcattggttatt 38260377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 2e-32; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 11082270 - 11082353
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11082270 tttggagtatagttttttgtgttttctttggaaaaagttttatagggagatgtaaaaacaattttcattggctattggttatgg 11082353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 21542554 - 21542471
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  21542554 tttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatttttattggctattggttatgg 21542471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 35129079 - 35129163
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaa-aaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  35129079 tttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaataaacaattttcattggttattggttatgg 35129163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 3095745 - 3095827
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  3095745 tttggagtatagttttttgtgttttctttggaaaa-gttttataggaagatgtaaaaacaattttcattggctattgattatgg 3095827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 30794217 - 30794300
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  30794217 tttgaagtataattttttatgttttatttggaataagttttataggaagatgtaaaaacatttttcattggctattggtgatgg 30794300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 465 - 541
Target Start/End: Original strand, 34177673 - 34177749
Alignment:
Q  465 tatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||||| |||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||    
T  34177673 tatagttttttgtgttttctttggaaaaaaatttatagggagatgtaaaaacaattttcattggctattggttatgg 34177749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 466 - 541
Target Start/End: Original strand, 7274908 - 7274983
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||||||| | |||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||    
T  7274908 atagttttttgtattttctttggaataagtttcatgggaagatgtaaaaacaattttcattggctattggttatgg 7274983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 466 - 528
Target Start/End: Complemental strand, 16524505 - 16524443
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    |||||||||| |||| |||||| || |||||||||||||||||||||||||||||||||||||    
T  16524505 atagttttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattttcattgg 16524443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 465 - 541
Target Start/End: Original strand, 12461461 - 12461537
Alignment:
Q  465 tatagttttttatgttttctttggaaaaagtttt-ataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||||| | ||||||||| || ||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  12461461 tatagtttttt-tattttctttgaaataagtttttatagaaagatgtaaaaacaattttcattggctattggttatgg 12461537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 466 - 528
Target Start/End: Complemental strand, 4032113 - 4032051
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    |||||||||| |||| |||||| || ||||||||| |||||||||||||||||||||||||||    
T  4032113 atagttttttgtgttatctttgaaataagttttatcggaagatgtaaaaacaattttcattgg 4032051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 466 - 528
Target Start/End: Complemental strand, 4988069 - 4988007
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    |||||||||| |||| |||||| || |||||||||||||||||||||||| ||||||||||||    
T  4988069 atagttttttgtgttatctttgaaataagttttataggaagatgtaaaaataattttcattgg 4988007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 466 - 528
Target Start/End: Original strand, 16013465 - 16013527
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    |||||||||| | || |||||| || |||||||||||||||||||||||||||||||||||||    
T  16013465 atagttttttgtattatctttgaaataagttttataggaagatgtaaaaacaattttcattgg 16013527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 492 - 534
Target Start/End: Original strand, 5300659 - 5300701
Alignment:
Q  492 aagttttataggaagatgtaaaaacaattttcattggctattg 534  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  5300659 aagttttataggaagatgtaaaaacaattttcattggttattg 5300701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 458 - 522
Target Start/End: Original strand, 5822059 - 5822123
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaatttt 522  Q
    |||| |||||| ||| || |||| ||||||||| |||||| |||| |||||||||||||||||||    
T  5822059 tttgtagtataatttcttgtgttatctttggaataagtttcatagaaagatgtaaaaacaatttt 5822123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 466 - 525
Target Start/End: Complemental strand, 3888553 - 3888494
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 525  Q
    |||||| ||| |||| | |||| || |||||||||||||||||||| |||||||||||||    
T  3888553 atagttatttgtgttatatttgaaataagttttataggaagatgtagaaacaattttcat 3888494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 458 - 533
Target Start/End: Original strand, 5881777 - 5881852
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctatt 533  Q
    |||| |||||| ||| || |||| ||||||||  |||||| |||| ||||||||||||||||||| ||||| ||||    
T  5881777 tttgcagtataatttcttctgttatctttggactaagtttcatagaaagatgtaaaaacaattttaattggttatt 5881852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 539
Target Start/End: Complemental strand, 31107320 - 31107245
Alignment:
Q  464 gtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    |||||||||||| ||||||||||| |||||  |||||| ||| |||||||||  ||||| |||| |||||| ||||    
T  31107320 gtatagttttttgtgttttctttgaaaaaaaatttataagaaaatgtaaaaatgatttttattgactattgattat 31107245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 609 - 643
Target Start/End: Original strand, 3095897 - 3095931
Alignment:
Q  609 tcttgaaaaagataaaagtttgtcttttttgctta 643  Q
    ||||| |||||||||||||||||||||||||||||    
T  3095897 tcttggaaaagataaaagtttgtcttttttgctta 3095931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 458 - 528
Target Start/End: Complemental strand, 17598425 - 17598355
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    ||||| ||||| |||||| |||| ||||||||| || |||||| | |||||||||||| |||| |||||||    
T  17598425 tttgaggtataattttttgtgttctctttggaataaattttatggaaagatgtaaaaataattctcattgg 17598355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 609 - 642
Target Start/End: Original strand, 35129231 - 35129264
Alignment:
Q  609 tcttgaaaaagataaaagtttgtcttttttgctt 642  Q
    ||||| ||||||||||||||||||||||||||||    
T  35129231 tcttggaaaagataaaagtttgtcttttttgctt 35129264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 615 - 643
Target Start/End: Complemental strand, 21542397 - 21542369
Alignment:
Q  615 aaaagataaaagtttgtcttttttgctta 643  Q
    |||||||||||||||||||||||||||||    
T  21542397 aaaagataaaagtttgtcttttttgctta 21542369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 2e-32; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 20644150 - 20644067
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20644150 tttggagtataattttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 20644067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 42273783 - 42273700
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  42273783 tttggagtatagttttttgtgttttctttggaaaaagttttataagaagatgtaaaaacaattttcattggctattggttatgg 42273700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 6686521 - 6686437
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaa-gttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6686521 tttggagtatagttttttgtgttttctttggaaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 6686437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 11261909 - 11261992
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| |||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11261909 tttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 11261992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 34425466 - 34425383
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  34425466 tttgaagtatagttttttgtgttttctttgaaaaaagttttataggaatatgtaaaaacaattttcattggctattgattatgg 34425383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 37522614 - 37522697
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37522614 tttggagtatagttttttgtgttttttttggaaaaagttttataggaagatgtaaaaacaattttcattggctattgtttatgg 37522697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 43589987 - 43590070
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  43589987 tttggagtatagttttttgtgttttcttttgaaaaagttttatagggagatgtaaaaacaattttcattggctattggttatgg 43590070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 467 - 541
Target Start/End: Original strand, 38130150 - 38130224
Alignment:
Q  467 tagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||| |||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  38130150 tagttttttgtgttttctttagaaaaagttttataggaatatgtaaaaataattttcattggctattggttatgg 38130224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 463 - 539
Target Start/End: Original strand, 5984138 - 5984214
Alignment:
Q  463 agtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    ||||||||||||| |||||||||||||| ||||||||||| || ||||||||||||||||||||| |||||||||||    
T  5984138 agtatagttttttgtgttttctttggaataagttttatagaaatatgtaaaaacaattttcattgactattggttat 5984214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 37562786 - 37562870
Alignment:
Q  458 tttgaagtatagttttttatgttttcttt-ggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  37562786 tttggagtatagttttttgtgtttttttttggaaaaagttttataggaagatgtaaaaacaattttcattagctattgtttatgg 37562870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 466 - 541
Target Start/End: Complemental strand, 19413269 - 19413194
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||||||| ||||||||||| || ||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  19413269 atagttttttgtgttttctttgaaataagttttatgggaagatgtaaaaacaattttcattggcaattggttatgg 19413194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 32111138 - 32111055
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| |||||| | |||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  32111138 tttggagtataatgttttgtgttttctttgaaaaaagtttcataggaagatgtaaaaacaattttcattgactattggttatgg 32111055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 458 - 540
Target Start/End: Complemental strand, 20039238 - 20039156
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatg 540  Q
    |||| |||||| |||||| ||||||||||| |||| ||||||||||||||||||||| ||||||| |||||||||||||||||    
T  20039238 tttggagtataattttttgtgttttctttgaaaaaggttttataggaagatgtaaaaccaatttttattggctattggttatg 20039156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 465 - 537
Target Start/End: Original strand, 12912326 - 12912398
Alignment:
Q  465 tatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggtt 537  Q
    ||||||||||| |||| |||||| || ||||||||||||||||||||||||||||||||||||| ||||||||    
T  12912326 tatagttttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattttcattggttattggtt 12912398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 465 - 541
Target Start/End: Complemental strand, 8225591 - 8225514
Alignment:
Q  465 tatagttttttatgttttctttggaaaaagttttataggaagatgt-aaaaacaattttcattggctattggttatgg 541  Q
    ||||||||||| | ||||||||||||||||||||||||||| |||| ||||| || ||||||||||||||||||||||    
T  8225591 tatagttttttgtattttctttggaaaaagttttataggaaaatgtaaaaaaaaaatttcattggctattggttatgg 8225514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 466 - 541
Target Start/End: Complemental strand, 25840992 - 25840917
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||||||| |||||||||||||| |||||| || |||||||||||||||||||||||||| | |||| ||||||    
T  25840992 atagttttttgtgttttctttggaataagtttcatgggaagatgtaaaaacaattttcattgacaattgtttatgg 25840917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 470 - 541
Target Start/End: Original strand, 39505270 - 39505341
Alignment:
Q  470 ttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||| |||||||||||||| ||||||||| | |||||||||||||||||||||||||| ||| |||||||    
T  39505270 ttttttgtgttttctttggaataagttttatggtaagatgtaaaaacaattttcattggcaattcgttatgg 39505341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 459 - 538
Target Start/End: Original strand, 43454349 - 43454428
Alignment:
Q  459 ttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggtta 538  Q
    ||||| ||||||||||| |||||||||||  | |||||||||||||| ||||||||||||||||||||  ||||||||||    
T  43454349 ttgaaatatagttttttgtgttttctttgtcataagttttataggaatatgtaaaaacaattttcatttactattggtta 43454428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 463 - 541
Target Start/End: Complemental strand, 17351519 - 17351441
Alignment:
Q  463 agtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||||||| | ||||| |||||| ||||||||| | ||||||||||||||||||| ||||||||||| ||||||    
T  17351519 agtatagttttttttattttcgttggaataagttttatggaaagatgtaaaaacaattttaattggctattgattatgg 17351441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 488 - 541
Target Start/End: Complemental strand, 32017809 - 32017756
Alignment:
Q  488 gaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  32017809 gaaaacgttttataggaagatgtaaaaacaattttcattgtctattggttatgg 32017756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 480 - 541
Target Start/End: Complemental strand, 38280961 - 38280900
Alignment:
Q  480 tttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||| ||||| ||||||    
T  38280961 tttctttgaaaaaagttttataggaaaatgtaaaaacaattttcattggttattgattatgg 38280900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 477 - 541
Target Start/End: Complemental strand, 4463477 - 4463413
Alignment:
Q  477 tgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||||||||||| ||| || || ||||||||||||||||||||||| ||||||||||||||||    
T  4463477 tgttttctttggaataagcttcatgggaagatgtaaaaacaattttcactggctattggttatgg 4463413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 467 - 527
Target Start/End: Complemental strand, 8959767 - 8959707
Alignment:
Q  467 tagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 527  Q
    ||||||||| |||| |||||| || ||||||||||||||||||||||||||||||||||||    
T  8959767 tagttttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattttcattg 8959707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 465 - 540
Target Start/End: Original strand, 41625543 - 41625618
Alignment:
Q  465 tatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatg 540  Q
    ||||||||||| ||||||||||| || |||||| |||||||||||||||||  ||||||||| ||||||| |||||    
T  41625543 tatagttttttgtgttttctttgaaataagtttcataggaagatgtaaaaattattttcattcgctattgattatg 41625618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 474 - 540
Target Start/End: Original strand, 104255 - 104321
Alignment:
Q  474 ttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatg 540  Q
    |||| |||| |||| |||||||||||||| ||||||||||||||||||||||| |||||| ||||||    
T  104255 ttatattttttttgaaaaaagttttatagaaagatgtaaaaacaattttcattagctattagttatg 104321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 466 - 539
Target Start/End: Original strand, 5369064 - 5369137
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    |||||||||| |||| | |||  || ||||||||||||||||||||||||||||||||||||| | ||||||||    
T  5369064 atagttttttgtgttatttttaaaataagttttataggaagatgtaaaaacaattttcattggttgttggttat 5369137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 472 - 533
Target Start/End: Original strand, 42104287 - 42104348
Alignment:
Q  472 ttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctatt 533  Q
    |||| |||| ||||||||| |||||| || ||||||||||||||||||||||||||||||||    
T  42104287 ttttgtgttctctttggaacaagtttcatgggaagatgtaaaaacaattttcattggctatt 42104348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 466 - 526
Target Start/End: Original strand, 5736273 - 5736333
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 526  Q
    ||||||||||||||| |||||| || || |||||||||||| |||||||||||||||||||    
T  5736273 atagttttttatgttatctttgaaataaattttataggaagttgtaaaaacaattttcatt 5736333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 492 - 536
Target Start/End: Original strand, 10153987 - 10154031
Alignment:
Q  492 aagttttataggaagatgtaaaaacaattttcattggctattggt 536  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  10153987 aagttttataggaagatgtaaaaacaattttcattggttattggt 10154031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 23233547 - 23233464
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||| |||||||||||| ||||||||||| ||| |  |||||||||| ||||||||||| |||| |||  |||||||||||||    
T  23233547 tttgacgtatagttttttgtgttttctttgaaaacaactttataggaatatgtaaaaacagtttttattaactattggttatgg 23233464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 466 - 528
Target Start/End: Complemental strand, 8506559 - 8506497
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    ||||||| ||||||| || ||| || ||||||||||| |||||||||||||||||||||||||    
T  8506559 atagtttcttatgttatccttgaaataagttttatagaaagatgtaaaaacaattttcattgg 8506497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 9957488 - 9957526
Alignment:
Q  502 ggaagatgtaaaaacaattttcattggctattggttatg 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  9957488 ggaagatgtaaaaacaattttcattggctattggttatg 9957526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 466 - 528
Target Start/End: Original strand, 16153379 - 16153440
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    |||||||||| |||| |||||| || ||||||||||||||||||||||||| |||||||||||    
T  16153379 atagttttttgtgttatctttgaaataagttttataggaagatgtaaaaac-attttcattgg 16153440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 466 - 528
Target Start/End: Original strand, 1144524 - 1144586
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    |||||||||| |||| |||||  || || ||||||||||| ||||||||||||||||||||||    
T  1144524 atagttttttgtgttatctttaaaataaattttataggaatatgtaaaaacaattttcattgg 1144586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 495 - 541
Target Start/End: Original strand, 12729937 - 12729982
Alignment:
Q  495 ttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||    
T  12729937 ttttataggaaga-gtaaagacaattttcattggctattggttatgg 12729982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 495 - 541
Target Start/End: Original strand, 12792839 - 12792884
Alignment:
Q  495 ttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||    
T  12792839 ttttataggaaga-gtaaagacaattttcattggctattggttatgg 12792884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 458 - 528
Target Start/End: Complemental strand, 13146863 - 13146793
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    ||||| ||||| |||||| |||| ||||||||| ||||||||| | |||||||||||| |||| |||||||    
T  13146863 tttgaggtataattttttgtgttctctttggaataagttttatggaaagatgtaaaaataattctcattgg 13146793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 471 - 528
Target Start/End: Original strand, 3463853 - 3463910
Alignment:
Q  471 tttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    ||||| |||| |||||| || ||||||||||||||||| ||||||||||||| |||||    
T  3463853 tttttgtgttatctttgaaataagttttataggaagatataaaaacaatttttattgg 3463910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 467 - 528
Target Start/End: Original strand, 29307221 - 29307282
Alignment:
Q  467 tagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    ||||||||| |||  |||||  || |||||||||||||||||||||||| ||||||||||||    
T  29307221 tagttttttgtgtaatctttaaaataagttttataggaagatgtaaaaataattttcattgg 29307282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 458 - 528
Target Start/End: Original strand, 31690645 - 31690715
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    ||||| ||||| |||||| |||| |  ||||||  |||||||||| |||||||||||| ||||||||||||    
T  31690645 tttgaggtataattttttgtgttcttcttggaatgagttttatagaaagatgtaaaaataattttcattgg 31690715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 609 - 643
Target Start/End: Original strand, 43590138 - 43590172
Alignment:
Q  609 tcttgaaaaagataaaagtttgtcttttttgctta 643  Q
    ||||||||||||||||||||||| |||||||||||    
T  43590138 tcttgaaaaagataaaagtttgtattttttgctta 43590172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 470 - 539
Target Start/End: Complemental strand, 30703725 - 30703656
Alignment:
Q  470 ttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    |||||| |||| |||||| || || ||||||||||||||||| ||| || ||||||||| ||||| ||||    
T  30703725 ttttttgtgttatctttgaaataaattttataggaagatgtataaaaaagtttcattggttattgattat 30703656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 527
Target Start/End: Complemental strand, 32432380 - 32432319
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 527  Q
    ||||||| ||||||| || ||| || ||||||||||  |||||||||||| |||||||||||    
T  32432380 atagtttcttatgttatccttgaaataagttttatataaagatgtaaaaataattttcattg 32432319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 525
Target Start/End: Complemental strand, 32079633 - 32079573
Alignment:
Q  465 tatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 525  Q
    |||||||||||||||| || ||| ||  ||||| || | ||||||||||||||||||||||    
T  32079633 tatagttttttatgttctccttgaaattagtttaatggaaagatgtaaaaacaattttcat 32079573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 615 - 643
Target Start/End: Original strand, 37522772 - 37522800
Alignment:
Q  615 aaaagataaaagtttgtcttttttgctta 643  Q
    |||||||||||||||||||||||||||||    
T  37522772 aaaagataaaagtttgtcttttttgctta 37522800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 615 - 643
Target Start/End: Original strand, 37562944 - 37562972
Alignment:
Q  615 aaaagataaaagtttgtcttttttgctta 643  Q
    |||||||||||||||||||||||||||||    
T  37562944 aaaagataaaagtttgtcttttttgctta 37562972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 2e-32; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 30189711 - 30189628
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30189711 tttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 30189628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 458 - 539
Target Start/End: Complemental strand, 37075100 - 37075019
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  37075100 tttgaagtataattttttgtgttttctttggaaaaagttttataggaagatgtaaacacaattttcattggctattggttat 37075019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 6438223 - 6438140
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  6438223 tttggagtatagttttttgtgttttctttgaaaaaagctttataggaagatgtaaaaacaattttcattggctattggttatgg 6438140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 37042401 - 37042484
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37042401 tttggagtatagttttttgtgttttcgttggaaaaagttttataggaagatgtaaaaacaattttcattggctattgattatgg 37042484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 50651021 - 50651104
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  50651021 tttgaaatatagttttttgtgttttctttgcaaaaagttttataggaagatgtaaaaacaattttcattgactattggttatgg 50651104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 463 - 541
Target Start/End: Original strand, 23311582 - 23311660
Alignment:
Q  463 agtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23311582 agtatagttttgtgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 23311660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 11054295 - 11054379
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaa-agttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11054295 tttggagtatagttttttgtgttttctttggaaaaaagttttataggaagatttaaaaacaattttcattggctattggttatgg 11054379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 465 - 541
Target Start/End: Complemental strand, 28875539 - 28875463
Alignment:
Q  465 tatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  28875539 tatagttatttgtgttttctttggaaaaagttttataagaagatgtaaaaacaattttcattggctattggttatgg 28875463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 463 - 541
Target Start/End: Original strand, 23910502 - 23910580
Alignment:
Q  463 agtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||| ||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  23910502 agtatagctttttgtgttttctttgtaaaaagttttataggaagatgtaaaaataattttcattggctattggttatgg 23910580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 458 - 540
Target Start/End: Original strand, 46711642 - 46711724
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatg 540  Q
    |||| |||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  46711642 tttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaatattcattggctattggttatg 46711724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 469 - 541
Target Start/End: Original strand, 579133 - 579205
Alignment:
Q  469 gttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  579133 gttttttgtgttttctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttatgg 579205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 463 - 539
Target Start/End: Complemental strand, 9264686 - 9264610
Alignment:
Q  463 agtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    ||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  9264686 agtatagttttttgtgttttctttgaaaaaagttttatatgaagatgtaaaaacaattttcattggctattcgttat 9264610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 463 - 539
Target Start/End: Complemental strand, 36546677 - 36546601
Alignment:
Q  463 agtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    ||||||||||||| | ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  36546677 agtatagttttttgtattttctttggaaaaagtttcataggaagatgtaaaaccaattttcattggctattggttat 36546601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 463 - 539
Target Start/End: Original strand, 36561638 - 36561714
Alignment:
Q  463 agtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    ||||||||||||| | ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  36561638 agtatagttttttgtattttctttggaaaaagtttcataggaagatgtaaaaccaattttcattggctattggttat 36561714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 14752192 - 14752275
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| |||||| |||||| |||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||    
T  14752192 tttggagtataattttttgtgttttctttggaaaaaaatttataggaagatgtaaaaacaattttcattgactattggttatgg 14752275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 35963292 - 35963209
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||    
T  35963292 tttggagtatagttttttgtgttttgtttggaaaaagttttataggaagatggaaaaacaatttttattggttattggttatgg 35963209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 463 - 541
Target Start/End: Original strand, 7866472 - 7866550
Alignment:
Q  463 agtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||||||| | ||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  7866472 agtatagttttttttattttctttgaaaaaagttttataagaagatgtaaaaacaattttcattgactattggttatgg 7866550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 458 - 540
Target Start/End: Complemental strand, 6075221 - 6075139
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatg 540  Q
    |||| |||||| |||||| ||||||||||||||||||| ||| ||||||| ||||||||||||||||||||| ||||||||||    
T  6075221 tttggagtataattttttgtgttttctttggaaaaagtgttacaggaagaagtaaaaacaattttcattggccattggttatg 6075139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 463 - 541
Target Start/End: Complemental strand, 29235322 - 29235244
Alignment:
Q  463 agtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||||||| | |||||||| ||||| |||| ||||||||||||||||| |||||||||||||||||||||||||    
T  29235322 agtatagttttttgtattttctttagaaaacgtttaataggaagatgtaaaaataattttcattggctattggttatgg 29235244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 463 - 537
Target Start/End: Complemental strand, 31837054 - 31836980
Alignment:
Q  463 agtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggtt 537  Q
    ||||||||||||| | ||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||    
T  31837054 agtatagttttttgtattttctttggaaaaagttttataggaatatgcaaaaacaattttcattgactattggtt 31836980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 458 - 540
Target Start/End: Complemental strand, 47864331 - 47864249
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatg 540  Q
    |||| |||||||||||||   ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  47864331 tttggagtatagttttttgcattttctttgaaaaaagttttataggaagatgtaaaaacaattttcattgactattgattatg 47864249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 458 - 531
Target Start/End: Original strand, 41476320 - 41476393
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 531  Q
    |||| ||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  41476320 tttggagtatagttttttgtgttttctttgaaaaaagttttatagaaagatgtaaaaataattttcattggcta 41476393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 26724975 - 26725058
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||||| |||||| |||||||||||||| ||||||| |  |||||||||||||||||||||||||| ||||| ||||||    
T  26724975 tttgaagtataattttttgtgttttctttggaataagttttctgagaagatgtaaaaacaattttcattggttattgattatgg 26725058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 32619814 - 32619897
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| |||||| | |||| |||||||||||||| | |||||||| ||||||||||||| |||||||||||||||||||||||||    
T  32619814 tttggagtataatattttgtgttttctttggaataggttttataagaagatgtaaaaataattttcattggctattggttatgg 32619897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 53270375 - 53270292
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| ||||||||||| ||||||||| |||| |||||| ||||| ||||||||||| |||||||||||||    
T  53270375 tttggagtatagttttttgtgttttctttgaaaaaagtttcatagaaagatgaaaaaataattttcattgcctattggttatgg 53270292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 470 - 540
Target Start/End: Complemental strand, 2927417 - 2927347
Alignment:
Q  470 ttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatg 540  Q
    |||||| | |||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  2927417 ttttttgtattttctttggaataagttttatgggaagatgtaaaaataattttcattggctattggttatg 2927347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 465 - 541
Target Start/End: Complemental strand, 19464208 - 19464132
Alignment:
Q  465 tatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||  ||||||||||||||||   ||||||||||||    
T  19464208 tatagttttttgtgttttctttgaaaaaagttttataggaagattgaaaaacaattttcatttattattggttatgg 19464132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 54464880 - 54464962
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||||| |||||| ||||||||||  |||||  || ||||||||||||||||||||||||| |||||||||||||||||    
T  54464880 tttgaagtataattttttgtgttttctttaaaaaaaaatt-ataggaagatgtaaaaacaattttcgttggctattggttatgg 54464962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 470 - 538
Target Start/End: Complemental strand, 3972402 - 3972335
Alignment:
Q  470 ttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggtta 538  Q
    |||||| ||||||||||| || ||||||||| ||||||||||||||||||||||||| |||||||||||    
T  3972402 ttttttgtgttttctttg-aataagttttatgggaagatgtaaaaacaattttcattagctattggtta 3972335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 470 - 538
Target Start/End: Original strand, 3997476 - 3997543
Alignment:
Q  470 ttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggtta 538  Q
    |||||| ||||||||||| || ||||||||| ||||||||||||||||||||||||| |||||||||||    
T  3997476 ttttttgtgttttctttg-aataagttttatgggaagatgtaaaaacaattttcattagctattggtta 3997543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 492 - 540
Target Start/End: Original strand, 34722623 - 34722671
Alignment:
Q  492 aagttttataggaagatgtaaaaacaattttcattggctattggttatg 540  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  34722623 aagttttataagaagatgtaaaaacaattttcattggctattggttatg 34722671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 492 - 539
Target Start/End: Complemental strand, 34194988 - 34194941
Alignment:
Q  492 aagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34194988 aagttttataggaagatgtaaaaacaattttcattggttattggttat 34194941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 466 - 528
Target Start/End: Original strand, 22479046 - 22479108
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    |||||||||| |||| |||||| || |||||||||||||||||||||||||| ||||||||||    
T  22479046 atagttttttgtgttatctttgaaataagttttataggaagatgtaaaaacacttttcattgg 22479108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 463 - 533
Target Start/End: Complemental strand, 26208149 - 26208079
Alignment:
Q  463 agtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctatt 533  Q
    ||||||||||||| |||||| | ||||| |||||| || | ||||||||||||||||||||||||||||||    
T  26208149 agtatagttttttgtgttttgtctggaataagtttcatggtaagatgtaaaaacaattttcattggctatt 26208079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 50730249 - 50730166
Alignment:
Q  458 tttgaagtatagtttttta-tgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| |||||||||||||  || |||||||||||||||||||||||||||||||||||| ||   |||||| |||||||||||||    
T  50730249 tttggagtatagtttttttgtgctttctttggaaaaagttttataggaagatgtaaaaa-aaaaatcattgactattggttatgg 50730166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 50782605 - 50782688
Alignment:
Q  458 tttgaagtatagtttttta-tgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| |||||||||||||  || |||||||||||||||||||||||||||||||||||| ||   |||||| |||||||||||||    
T  50782605 tttggagtatagtttttttgtgctttctttggaaaaagttttataggaagatgtaaaaa-aaaaatcattgactattggttatgg 50782688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 492 - 539
Target Start/End: Original strand, 16033005 - 16033052
Alignment:
Q  492 aagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||    
T  16033005 aagttttataggaagatgtaaaaacaattttcattggttattagttat 16033052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 465 - 528
Target Start/End: Complemental strand, 38401507 - 38401444
Alignment:
Q  465 tatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    ||||||||||| |||| |||||| || |||||||||||| ||||||||||| ||||||||||||    
T  38401507 tatagttttttgtgttatctttgaaataagttttatagggagatgtaaaaataattttcattgg 38401444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 492 - 539
Target Start/End: Original strand, 46918231 - 46918278
Alignment:
Q  492 aagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  46918231 aagttttataggaagatctaaaaacaattttcattggttattggttat 46918278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 482 - 528
Target Start/End: Complemental strand, 10014379 - 10014333
Alignment:
Q  482 tctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    |||||| || |||||||||||||||||||||||||||||||||||||    
T  10014379 tctttgaaataagttttataggaagatgtaaaaacaattttcattgg 10014333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 482 - 528
Target Start/End: Complemental strand, 10115021 - 10114975
Alignment:
Q  482 tctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    |||||| || |||||||||||||||||||||||||||||||||||||    
T  10115021 tctttgaaataagttttataggaagatgtaaaaacaattttcattgg 10114975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 482 - 528
Target Start/End: Complemental strand, 10252121 - 10252075
Alignment:
Q  482 tctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    |||||| || |||||||||||||||||||||||||||||||||||||    
T  10252121 tctttgaaataagttttataggaagatgtaaaaacaattttcattgg 10252075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 471 - 541
Target Start/End: Original strand, 20847265 - 20847335
Alignment:
Q  471 tttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||| |||||||||||||| |||||| ||||||||||||  ||||||||||||||||  |||| ||||||    
T  20847265 tttttgtgttttctttggaataagtttcataggaagatgtgcaaacaattttcattggtaattgattatgg 20847335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 466 - 528
Target Start/End: Complemental strand, 21214367 - 21214305
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    |||||||||| |||| | |||| || ||||||||||| |||||||||||||||||||||||||    
T  21214367 atagttttttgtgttatttttgaaataagttttatagaaagatgtaaaaacaattttcattgg 21214305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 492 - 534
Target Start/End: Original strand, 54725628 - 54725670
Alignment:
Q  492 aagttttataggaagatgtaaaaacaattttcattggctattg 534  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  54725628 aagttttataggaagatgtaaaaacaattttcattggttattg 54725670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 466 - 539
Target Start/End: Original strand, 8097010 - 8097083
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    ||||||| || |||| || ||| || |||||||||||||||||||||||| |||||||||||| ||||| ||||    
T  8097010 atagtttcttgtgttatccttgaaataagttttataggaagatgtaaaaataattttcattggttattgcttat 8097083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 484 - 541
Target Start/End: Complemental strand, 8703221 - 8703165
Alignment:
Q  484 tttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||||  ||||||||||||||||||||||| ||||||||||||||| ||||||    
T  8703221 tttggaaaaaaatttataggaagatgtaaaaacaa-tttcattggctattgattatgg 8703165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 484 - 541
Target Start/End: Complemental strand, 9055108 - 9055052
Alignment:
Q  484 tttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||||  ||||||||||||||||||||||| ||||||||||||||| ||||||    
T  9055108 tttggaaaaaaatttataggaagatgtaaaaacaa-tttcattggctattgattatgg 9055052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 458 - 539
Target Start/End: Complemental strand, 31292745 - 31292664
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    ||||||||||| ||| || |||| || ||||||  |||| ||| ||||||||||||||||||||||||||| |||| |||||    
T  31292745 tttgaagtataatttcttttgttctccttggaattagttctatgggaagatgtaaaaacaattttcattggttatttgttat 31292664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 466 - 528
Target Start/End: Original strand, 22456000 - 22456062
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    |||||||||| ||||  ||||| || ||||||||||||||||| ||||||||||||| |||||    
T  22456000 atagttttttgtgttaactttgaaataagttttataggaagatataaaaacaattttgattgg 22456062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 504 - 541
Target Start/End: Complemental strand, 6752764 - 6752727
Alignment:
Q  504 aagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  6752764 aagatgtaaaaacaattttaattggctattggttatgg 6752727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 466 - 539
Target Start/End: Original strand, 30454717 - 30454789
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    ||||||| || |||| || ||| || ||||||||||| ||||||||||||||||||| ||||| ||||||||||    
T  30454717 atagtttcttgtgttatccttgaaataagttttatagaaagatgtaaaaacaatttt-attggttattggttat 30454789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 458 - 534
Target Start/End: Original strand, 33973550 - 33973627
Alignment:
Q  458 tttgaagtatagtttttta-tgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattg 534  Q
    |||| |||||||||||||  ||||||||||  |||||||||||||| |||| || |||| |||||||| |||||||||    
T  33973550 tttggagtatagtttttttgtgttttctttaaaaaaagttttatagaaagacgtcaaaataattttcagtggctattg 33973627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 493 - 541
Target Start/End: Original strand, 3084199 - 3084247
Alignment:
Q  493 agttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||||| |||||||||||||||||| |||||||| |||| |||||||    
T  3084199 agttttatgggaagatgtaaaaacaatattcattggttatttgttatgg 3084247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 466 - 526
Target Start/End: Complemental strand, 6784450 - 6784390
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 526  Q
    |||||||||| |||| |||||  || || ||||||||||||||||||||| ||||||||||    
T  6784450 atagttttttgtgttatctttcaaataaattttataggaagatgtaaaaataattttcatt 6784390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 495 - 539
Target Start/End: Original strand, 7886638 - 7886682
Alignment:
Q  495 ttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    |||||||| ||||||||||||||||||||||||| |||| |||||    
T  7886638 ttttatagaaagatgtaaaaacaattttcattggttattagttat 7886682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 609 - 643
Target Start/End: Original strand, 11054443 - 11054477
Alignment:
Q  609 tcttgaaaaagataaaagtttgtcttttttgctta 643  Q
    ||||| |||||||||||||||||||||||||||||    
T  11054443 tcttggaaaagataaaagtttgtcttttttgctta 11054477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 609 - 643
Target Start/End: Original strand, 23311728 - 23311762
Alignment:
Q  609 tcttgaaaaagataaaagtttgtcttttttgctta 643  Q
    |||||||||||||||||||||| ||||||||||||    
T  23311728 tcttgaaaaagataaaagtttgacttttttgctta 23311762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 609 - 643
Target Start/End: Original strand, 23910630 - 23910664
Alignment:
Q  609 tcttgaaaaagataaaagtttgtcttttttgctta 643  Q
    ||||||||||||||||| |||||||||||||||||    
T  23910630 tcttgaaaaagataaaaatttgtcttttttgctta 23910664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 458 - 528
Target Start/End: Complemental strand, 31126345 - 31126275
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    ||||| ||||| |||||| |||| || ||| || ||||||||| | |||||||||||| ||||||||||||    
T  31126345 tttgaggtataattttttgtgttctccttgaaataagttttatggaaagatgtaaaaataattttcattgg 31126275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 609 - 643
Target Start/End: Complemental strand, 36546531 - 36546497
Alignment:
Q  609 tcttgaaaaagataaaagtttgtcttttttgctta 643  Q
    |||||||||||| ||||||||||||||||||||||    
T  36546531 tcttgaaaaagacaaaagtttgtcttttttgctta 36546497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 609 - 643
Target Start/End: Original strand, 36561784 - 36561818
Alignment:
Q  609 tcttgaaaaagataaaagtttgtcttttttgctta 643  Q
    |||||||||||| ||||||||||||||||||||||    
T  36561784 tcttgaaaaagacaaaagtttgtcttttttgctta 36561818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 466 - 524
Target Start/End: Original strand, 47443966 - 47444023
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttca 524  Q
    |||||||||| |||| |||||| || || |||||||| |||||||||||||||||||||    
T  47443966 atagttttttgtgttatctttgaaataaattttatag-aagatgtaaaaacaattttca 47444023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 458 - 528
Target Start/End: Complemental strand, 55400871 - 55400801
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    ||||| ||||| |||||| |||| ||||||||| |||||| || | |||||||||||| |||| |||||||    
T  55400871 tttgaggtataattttttgtgttctctttggaataagtttcatggaaagatgtaaaaataattctcattgg 55400801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 523
Target Start/End: Original strand, 25242170 - 25242227
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 523  Q
    |||||||||| |||| |||||  || ||||||||||| |||||| |||||||||||||    
T  25242170 atagttttttgtgttatctttaaaataagttttatagaaagatgaaaaaacaattttc 25242227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 470 - 523
Target Start/End: Original strand, 46557166 - 46557219
Alignment:
Q  470 ttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 523  Q
    |||||| |||||||||| ||| |||||| || |||||||||||||| |||||||    
T  46557166 ttttttgtgttttctttagaataagtttcatgggaagatgtaaaaataattttc 46557219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 541
Target Start/End: Complemental strand, 30612304 - 30612228
Alignment:
Q  465 tatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||| |||||  ||  ||||| |||| ||||||||||||||||| ||||||| || || ||||||    
T  30612304 tataattttttatgttctctttaaaatgagtttcatagaaagatgtaaaaacaattctcattggttaatgattatgg 30612228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 492 - 528
Target Start/End: Complemental strand, 48291922 - 48291886
Alignment:
Q  492 aagttttataggaagatgtaaaaacaattttcattgg 528  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  48291922 aagttttataggaaggtgtaaaaataattttcattgg 48291886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774 (Bit Score: 68; Significance: 5e-30; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 3453 - 3536
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3453 tttggagtatagttttttgtgttttcttttgaaaaagttttataggaagatgtaaaaataattttcattggctattggttatgg 3536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 598 - 681
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||| | ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  598 tttggagtatagttttatgtgttttctttgaaaaaagttttatagggagatgtaaaaacaattttcattggctattggttatgg 681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 63; Significance: 5e-27; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 467 - 541
Target Start/End: Complemental strand, 10172 - 10098
Alignment:
Q  467 tagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  10172 tagttttttgtgttttctttagaaaaagttttataggaagatgtaaaaacaattttcattgactattggttatgg 10098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 63; Significance: 5e-27; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 463 - 541
Target Start/End: Complemental strand, 78088 - 78010
Alignment:
Q  463 agtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  78088 agtatagttttttgtgttttctttgaaaaaagttgtataggaagatgtaaaaacaattttcattggccattggttatgg 78010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 609 - 643
Target Start/End: Complemental strand, 77942 - 77908
Alignment:
Q  609 tcttgaaaaagataaaagtttgtcttttttgctta 643  Q
    |||||||||||||||||||||||||||||||||||    
T  77942 tcttgaaaaagataaaagtttgtcttttttgctta 77908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 44796 - 44879
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| |||||| |||||| ||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||    
T  44796 tttggagtatatttttttgtgttttctttggaaaaagttttataggaatattaaaaaacaattttcattggctattggttatgg 44879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 463 - 539
Target Start/End: Complemental strand, 40310 - 40234
Alignment:
Q  463 agtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    ||||||| ||||| |||||||||||||| || |||||||| ||| ||||||||||||||||||||||||||||||||    
T  40310 agtatagctttttgtgttttctttggaataaattttatagaaagttgtaaaaacaattttcattggctattggttat 40234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 466 - 541
Target Start/End: Complemental strand, 157922 - 157847
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||||||| |||||||||||||| |||||| || || ||||||||||||||||||||||||| |||||||||||    
T  157922 atagttttttgtgttttctttggaataagtttcatggggagatgtaaaaacaattttcattggcaattggttatgg 157847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 51; Significance: 7e-20; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 479 - 541
Target Start/End: Complemental strand, 154976 - 154914
Alignment:
Q  479 ttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  154976 ttttctttgaaaaaagttttatagaaagatgtaaaaacaatttacattggctattggttatgg 154914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 1148 - 1065
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| |||||| |||  |||||||||||||| |||||||||||||| |||||||||  ||||||||||||    
T  1148 tttggagtatagttttttgtgtttttttttaaaaaagttttatagaaagatgtaaaaacagttttcattgagtattggttatgg 1065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 9108 - 9025
Alignment:
Q  458 tttgaagtatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||| ||||||||||||| |||||| |||  |||||||||||||| |||||||||||||| |||||||||  ||||||||||||    
T  9108 tttggagtatagttttttgtgtttttttttaaaaaagttttatagaaagatgtaaaaacagttttcattgagtattggttatgg 9025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1786 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1786
Description:

Target: scaffold1786; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 478 - 541
Target Start/End: Complemental strand, 963 - 900
Alignment:
Q  478 gttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    ||||||||||||| ||||||||||| ||||| |||||| ||||||||||| |||||||||||||    
T  963 gttttctttggaataagttttatagaaagatataaaaataattttcattgactattggttatgg 900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 468 - 541
Target Start/End: Complemental strand, 160376 - 160303
Alignment:
Q  468 agttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 541  Q
    |||||||| |||||||||||||| ||  || || ||||||||||||| || |||||||||||||||||||||||    
T  160376 agttttttgtgttttctttggaataaaattcatgggaagatgtaaaaccagttttcattggctattggttatgg 160303  T

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Target: scaffold0565 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 465 - 523
Target Start/End: Original strand, 5907 - 5965
Alignment:
Q  465 tatagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 523  Q
    ||||||||||| |||| || ||| || ||||||||||||||||||||||||||||||||    
T  5907 tatagttttttgtgttatcattgaaataagttttataggaagatgtaaaaacaattttc 5965  T

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Target: scaffold0330 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 466 - 528
Target Start/End: Complemental strand, 3296 - 3234
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 528  Q
    |||||||||| |||| |||||| || ||||||||||||||||| |||||||||||| ||||||    
T  3296 atagttttttgtgttatctttgaaataagttttataggaagatctaaaaacaatttccattgg 3234  T

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Target: scaffold1157 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1157
Description:

Target: scaffold1157; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 538
Target Start/End: Original strand, 1711 - 1772
Alignment:
Q  477 tgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggtta 538  Q
    ||||||| ||||||  ||||| || |||||||||||||||| |||||||||| |||| ||||    
T  1711 tgttttccttggaattagtttcatgggaagatgtaaaaacatttttcattggttatttgtta 1772  T

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Target: scaffold0010 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 539
Target Start/End: Original strand, 160952 - 161025
Alignment:
Q  466 atagttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 539  Q
    ||||||| || |||| || ||| || |||||| |||| ||| ||||||||||||||||||||| |||| |||||    
T  160952 atagtttcttgtgttatccttgaaataagtttgatagaaagttgtaaaaacaattttcattggttatttgttat 161025  T

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