View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4804-Insertion-9 (Length: 503)
Name: NF4804-Insertion-9
Description: NF4804
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4804-Insertion-9 |
 |  |
|
| [»] chr3 (18 HSPs) |
 |  |
|
Alignment Details
Target: chr3 (Bit Score: 480; Significance: 0; HSPs: 18)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 480; E-Value: 0
Query Start/End: Original strand, 8 - 503
Target Start/End: Original strand, 36002275 - 36002770
Alignment:
| Q |
8 |
acattaattaatttgtacctgaattccatcccatagctttttaagtttgctattggtcatgctaagttgtacaagattttcagcacagaagcttgctggc |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36002275 |
acattaattaatttgtacctgaattccatcccatagctttttaagtttgctattggtcatgctaagttgtacaagattttcagcacagaagcttgctggc |
36002374 |
T |
 |
| Q |
108 |
aaagaattaagtgggaatgattcccatttaaggtacctcaatttatcagacaaccactcaagaccttcatgaaggtgcacaatggatccttcatttcttc |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36002375 |
aaagaattaagtgggaatgattcccatttaaggtacctcaatttatcagacaaccactcaagaccttcatgaaggtgcacaatggatccttcatttcttc |
36002474 |
T |
 |
| Q |
208 |
catttgtcagaaatatattatgtaaactattaaggatatgaagatatcttaagttggtcatgcttttaaaggaagcagagctcaagtatagatccccaaa |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
36002475 |
catttgtcagaaatatattatgtaaactattaaggatatgaagatatcttaagttggtcatgcttttaaatgaagcagagctcaagtatagatccccaaa |
36002574 |
T |
 |
| Q |
308 |
gtcacaaatatcgaaaaatataacttccacaacttcagttccctgaaaaacaaattttaaaataataattatattagccaatgttgccatacatatttca |
407 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36002575 |
gtcacaaatatcgaaaaatataacttcaacaacttcagttccctgaaaaacaaaatttaaaataataattatattagccaatgttgccatacatatttca |
36002674 |
T |
 |
| Q |
408 |
taatcaaatatatgcatgcattttttaatagaagtaattaagttttcgacttaccttgttatatttcaataaatcatacacttccttaggatccca |
503 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36002675 |
taatcaaatatatgcatgcattttttaatagaagtaattgagttttcgacttaccttgttatatttcaataaatcatacacttccttaggatccca |
36002770 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 243 - 378
Target Start/End: Original strand, 36023603 - 36023737
Alignment:
| Q |
243 |
atatgaagatatcttaagttggtcatgcttttaaaggaagcagagctcaagtatagatccccaaagtcacaaatatcgaaaaatataacttccacaactt |
342 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||| | || || |||| ||||| | || ||||| ||||||| |
|
|
| T |
36023603 |
atatgaagacatcttaagttggtcatgcttttaaaggaatcagaggtcaagtatagatctctaatttctgaaatgtcgaatatgatgacttcaacaactt |
36023702 |
T |
 |
| Q |
343 |
cagttccctgaaaaacaaattttaaaataataatta |
378 |
Q |
| |
|
| ||||||| ||||||||| |||| ||||||||||| |
|
|
| T |
36023703 |
cggttccctaaaaaacaaa-tttagaataataatta |
36023737 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 243 - 361
Target Start/End: Original strand, 23351901 - 23352019
Alignment:
| Q |
243 |
atatgaagatatcttaagttggtcatgcttttaaaggaagcagagctcaagtatagatccccaaagtcacaaatatcgaaaaatataacttccacaactt |
342 |
Q |
| |
|
|||| ||||||||||||||| ||||| |||||||||||| |||| |||||||||||||||||| || | ||||||| | |||| |||||||||||| |
|
|
| T |
23351901 |
atatcaagatatcttaagtttgtcatccttttaaaggaatcagacttcaagtatagatccccaacttctgtactatcgaatattataccttccacaactt |
23352000 |
T |
 |
| Q |
343 |
cagttccctgaaaaacaaa |
361 |
Q |
| |
|
||||||||||| ||||||| |
|
|
| T |
23352001 |
cagttccctgacaaacaaa |
23352019 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 23463039 - 23463193
Alignment:
| Q |
18 |
atttgtacctgaattccatcccatagctttttaagtttgctattggtcatgctaagttgtacaagattttcagcacagaagcttgctggcaaagaattaa |
117 |
Q |
| |
|
||||||||||||| ||||||||| ||||||||||| ||||||| |||||| ||| | |||||| |||||||||| ||| ||| ||||||||| | || |
|
|
| T |
23463039 |
atttgtacctgaactccatcccagagctttttaagcttgctatgactcatgcaaagatatacaagcatttcagcacaaaaggttgatggcaaagactcaa |
23463138 |
T |
 |
| Q |
118 |
gtgggaatgattcccatttaaggtacctcaatttatcagacaaccactcaagacc |
172 |
Q |
| |
|
| | || | ||||| ||| ||||||||||||||||| | |||||||||||| |
|
|
| T |
23463139 |
gacagtatcttacccatagaagatacctcaatttatcagaaatccactcaagacc |
23463193 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 23439874 - 23439979
Alignment:
| Q |
248 |
aagatatcttaagttggtcatgcttttaaaggaagcagagctcaagtatagatccccaaagtcacaaatatcgaaaaatataacttccacaacttcagtt |
347 |
Q |
| |
|
||||||||||||||| | ||| ||| |||||||| |||| |||||||||||||||||| || | ||||||| | |||| ||||||||||||||||| |
|
|
| T |
23439874 |
aagatatcttaagtttgccatccttctaaaggaatcagacttcaagtatagatccccaacttccgtagtatcgaatattataccttccacaacttcagtt |
23439973 |
T |
 |
| Q |
348 |
ccctga |
353 |
Q |
| |
|
|||||| |
|
|
| T |
23439974 |
ccctga |
23439979 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 242 - 378
Target Start/End: Original strand, 23386234 - 23386370
Alignment:
| Q |
242 |
gatatgaagatatcttaagttggtcatgcttttaaaggaagcagagctcaagtatagatccccaaagtcacaaatatcgaaaaatataacttccacaact |
341 |
Q |
| |
|
||||| |||||||||||| || ||||| ||| |||||||| |||| |||||||||||||||||| || | |||| || | |||| ||||||||||| |
|
|
| T |
23386234 |
gatattaagatatcttaaatttgtcatccttctaaaggaatcagacttcaagtatagatccccaacttccgtactatccaatattataccttccacaact |
23386333 |
T |
 |
| Q |
342 |
tcagttccctgaaaaacaaattttaaaataataatta |
378 |
Q |
| |
|
|||||||||||| ||| ||| ||| | ||||||||| |
|
|
| T |
23386334 |
tcagttccctgacaaataaaaattagattaataatta |
23386370 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 242 - 378
Target Start/End: Original strand, 23404608 - 23404744
Alignment:
| Q |
242 |
gatatgaagatatcttaagttggtcatgcttttaaaggaagcagagctcaagtatagatccccaaagtcacaaatatcgaaaaatataacttccacaact |
341 |
Q |
| |
|
||||| ||||||||||||||| ||||| ||| |||||||| |||| ||||||| | |||||||| || | ||||||| | |||| ||||||||||| |
|
|
| T |
23404608 |
gatattaagatatcttaagtttgtcatccttctaaaggaatcagacttcaagtaaatatccccaacatccgtactatcgaatattataccttccacaact |
23404707 |
T |
 |
| Q |
342 |
tcagttccctgaaaaacaaattttaaaataataatta |
378 |
Q |
| |
|
|||||||||||| ||| ||| ||| | ||||||||| |
|
|
| T |
23404708 |
tcagttccctgacaaataaaaattagattaataatta |
23404744 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 36023380 - 36023431
Alignment:
| Q |
8 |
acattaattaatttgtacctgaattccatcccatagctttttaagtttgcta |
59 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||| || |||||| |
|
|
| T |
36023380 |
acattaattaatttgtacctgaattccatcccaaagcttttttagcttgcta |
36023431 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 23439668 - 23439822
Alignment:
| Q |
18 |
atttgtacctgaattccatcccatagctttttaagtttgctattggtcatgctaagttgtacaagattttcagcacagaagcttgctggcaaagaattaa |
117 |
Q |
| |
|
||||||||||||| |||||| || || |||||||| ||||||| ||||||||||| | |||||| |||||||||| ||| ||| ||| ||||| | || |
|
|
| T |
23439668 |
atttgtacctgaactccatctcagagatttttaagcttgctatgagtcatgctaagctctacaagcatttcagcacaaaagtttgatggaaaagactaaa |
23439767 |
T |
 |
| Q |
118 |
gtgggaatgattcccatttaaggtacctcaatttatcagacaaccactcaagacc |
172 |
Q |
| |
|
| || ||||||| ||||||||||||||||||||| | |||||| ||||| |
|
|
| T |
23439768 |
gacaatatccctcccattgaaggtacctcaatttatcagaaagccactcgagacc |
23439822 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 23472409 - 23472514
Alignment:
| Q |
248 |
aagatatcttaagttggtcatgcttttaaaggaagcagagctcaagtatagatccccaaagtcacaaatatcgaaaaatataacttccacaacttcagtt |
347 |
Q |
| |
|
||||||||||||||| ||||| ||| |||||||| |||| |||||||||||||||||| || | ||||||| | |||| ||||| |||||| |||| |
|
|
| T |
23472409 |
aagatatcttaagtttgtcatccttctaaaggaatcagacttcaagtatagatccccaacttccgtactatcgaatattataccttccccaactttagtt |
23472508 |
T |
 |
| Q |
348 |
ccctga |
353 |
Q |
| |
|
|||||| |
|
|
| T |
23472509 |
ccctga |
23472514 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 112
Target Start/End: Original strand, 23386037 - 23386131
Alignment:
| Q |
18 |
atttgtacctgaattccatcccatagctttttaagtttgctattggtcatgctaagttgtacaagattttcagcacagaagcttgctggcaaaga |
112 |
Q |
| |
|
||||||||||||| ||||||||| ||||||||||| ||||| | |||||| ||| | |||||| |||||||||| ||| ||| ||||||||| |
|
|
| T |
23386037 |
atttgtacctgaactccatcccagagctttttaagcttgctttgattcatgcaaagctctacaagcatttcagcacaaaaggttgatggcaaaga |
23386131 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 23447048 - 23447090
Alignment:
| Q |
18 |
atttgtacctgaattccatcccatagctttttaagtttgctat |
60 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
23447048 |
atttgtacctgaactccatcccatagctttttaagcttgctat |
23447090 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 23478348 - 23478390
Alignment:
| Q |
18 |
atttgtacctgaattccatcccatagctttttaagtttgctat |
60 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
23478348 |
atttgtacctgaactccatcccatagctttttaagcttgctat |
23478390 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 23472204 - 23472297
Alignment:
| Q |
19 |
tttgtacctgaattccatcccatagctttttaagtttgctattggtcatgctaagttgtacaagattttcagcacagaagcttgctggcaaaga |
112 |
Q |
| |
|
|||||||||||| ||||||||| ||||||||||| ||||||| |||||| ||| | |||||| |||||||||| ||| ||| ||| ||||| |
|
|
| T |
23472204 |
tttgtacctgaactccatcccagagctttttaagcttgctatgagtcatgtgaagctctacaagcatttcagcacaaaagtttgatggaaaaga |
23472297 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 23498829 - 23498869
Alignment:
| Q |
20 |
ttgtacctgaattccatcccatagctttttaagtttgctat |
60 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
23498829 |
ttgtacctgaactccatcccatagctttttaagcttgctat |
23498869 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 112
Target Start/End: Original strand, 23404408 - 23404502
Alignment:
| Q |
18 |
atttgtacctgaattccatcccatagctttttaagtttgctattggtcatgctaagttgtacaagattttcagcacagaagcttgctggcaaaga |
112 |
Q |
| |
|
||||||||||||| ||||||||| ||||||||||| ||||| | | ||||| ||| | |||||| |||||||||| || ||| ||||||||| |
|
|
| T |
23404408 |
atttgtacctgaactccatcccagagctttttaagcttgctttgagccatgcaaagctctacaagcatttcagcacaaaaagttgatggcaaaga |
23404502 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 23453818 - 23453860
Alignment:
| Q |
18 |
atttgtacctgaattccatcccatagctttttaagtttgctat |
60 |
Q |
| |
|
||||||||||||| ||||||||| ||||||||||| ||||||| |
|
|
| T |
23453818 |
atttgtacctgaactccatcccagagctttttaagcttgctat |
23453860 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 242 - 306
Target Start/End: Original strand, 23463239 - 23463303
Alignment:
| Q |
242 |
gatatgaagatatcttaagttggtcatgcttttaaaggaagcagagctcaagtatagatccccaa |
306 |
Q |
| |
|
|||||||||||||||||| || ||||| ||| |||||||| |||| ||||||| | |||||||| |
|
|
| T |
23463239 |
gatatgaagatatcttaaatttgtcatccttctaaaggaatcagacttcaagtaaatatccccaa |
23463303 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 109; Significance: 1e-54; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 8 - 188
Target Start/End: Complemental strand, 16337754 - 16337574
Alignment:
| Q |
8 |
acattaattaatttgtacctgaattccatcccatagctttttaagtttgctattggtcatgctaagttgtacaagattttcagcacagaagcttgctggc |
107 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| |||||| |||| ||||||| ||||||||||||||||||||| |||| |||||| ||| ||| |||| |
|
|
| T |
16337754 |
acattaattaatttgtacctgaattctatcccaaagctttctaagcttgctatgggtcatgctaagttgtacaaggttttgagcacaaaaggttgatggc |
16337655 |
T |
 |
| Q |
108 |
aaagaattaagtgggaatgattcccatttaaggtacctcaatttatcagacaaccactcaagaccttcatgaaggtgcaca |
188 |
Q |
| |
|
||||| | |||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||| || || |||||| |
|
|
| T |
16337654 |
aaagattcaagtggaaatgattcccaatgaaggtacctcaatttatcagacaaccactcaagaccttcttggagatgcaca |
16337574 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 8 - 188
Target Start/End: Original strand, 16121414 - 16121594
Alignment:
| Q |
8 |
acattaattaatttgtacctgaattccatcccatagctttttaagtttgctattggtcatgctaagttgtacaagattttcagcacagaagcttgctggc |
107 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| |||||| |||| ||||||| |||||||||||||| |||||| |||| || ||| ||| ||| |||| |
|
|
| T |
16121414 |
acattaattaatttgtacctgaattctatcccaaagctttctaagcttgctatgggtcatgctaagttctacaagcttttgaggacaaaaggttgatggc |
16121513 |
T |
 |
| Q |
108 |
aaagaattaagtgggaatgattcccatttaaggtacctcaatttatcagacaaccactcaagaccttcatgaaggtgcaca |
188 |
Q |
| |
|
||||| | |||||| ||||||||||| | |||||| |||||||||||||||||||||||||||||||| || || |||||| |
|
|
| T |
16121514 |
aaagactcaagtggaaatgattcccaatgaaggtagctcaatttatcagacaaccactcaagaccttcttggagatgcaca |
16121594 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 242 - 378
Target Start/End: Original strand, 16121612 - 16121747
Alignment:
| Q |
242 |
gatatgaagatatcttaagttggtcatgcttttaaaggaagcagagctcaagtatagatccccaaagtcacaaatatcgaaaaatataacttccacaact |
341 |
Q |
| |
|
||||||||| ||||||||||| ||||||| | |||||| ||||||||||||| ||| |||| | | || |||| || | ||||||||| ||| | |
|
|
| T |
16121612 |
gatatgaagtaatcttaagttgatcatgctctcaaaggatctggagctcaagtatacatcaccaattttagaagtatcaaatagtataacttcaacagca |
16121711 |
T |
 |
| Q |
342 |
tcagttccctgaaaaacaaattttaaaataataatta |
378 |
Q |
| |
|
||||||||||| |||||||| ||| ||||||||||| |
|
|
| T |
16121712 |
tcagttccctg-aaaacaaaattttgaataataatta |
16121747 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 242 - 378
Target Start/End: Complemental strand, 16337556 - 16337421
Alignment:
| Q |
242 |
gatatgaagatatcttaagttggtcatgcttttaaaggaagcagagctcaagtatagatccccaaagtcacaaatatcgaaaaatataacttccacaact |
341 |
Q |
| |
|
||||||||| ||||||||||| ||||||| | |||||| ||||||||||||| ||| |||| | | || |||| || | ||||||||| ||| | |
|
|
| T |
16337556 |
gatatgaagtaatcttaagttgatcatgctctcaaaggatctggagctcaagtatacatcaccaattttagaagtatcaaatagtataacttcaacagca |
16337457 |
T |
 |
| Q |
342 |
tcagttccctgaaaaacaaattttaaaataataatta |
378 |
Q |
| |
|
||||||||||| |||||||| ||| ||||||||||| |
|
|
| T |
16337456 |
tcagttccctg-aaaacaaaattttgaataataatta |
16337421 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 81; Significance: 7e-38; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 8 - 188
Target Start/End: Complemental strand, 12897254 - 12897074
Alignment:
| Q |
8 |
acattaattaatttgtacctgaattccatcccatagctttttaagtttgctattggtcatgctaagttgtacaagattttcagcacagaagcttgctggc |
107 |
Q |
| |
|
|||||||| ||| |||||||||||| ||| ||| ||||||||||| ||||||| | |||||||||||||||||| ||| ||||| ||| ||| |||| |
|
|
| T |
12897254 |
acattaataaatgtgtacctgaatttcattccaaagctttttaagcttgctatggcgcatgctaagttgtacaagccattcggcacaaaaggttgatggc |
12897155 |
T |
 |
| Q |
108 |
aaagaattaagtgggaatgattcccatttaaggtacctcaatttatcagacaaccactcaagaccttcatgaaggtgcaca |
188 |
Q |
| |
|
||||| | ||||||||||| |||||| | ||||| ||||||||||||||||||||| |||||||||||| | ||||||||| |
|
|
| T |
12897154 |
aaagactcaagtgggaatgcttcccaataaaggtgcctcaatttatcagacaaccattcaagaccttcaaggaggtgcaca |
12897074 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 242 - 303
Target Start/End: Complemental strand, 12897032 - 12896971
Alignment:
| Q |
242 |
gatatgaagatatcttaagttggtcatgcttttaaaggaagcagagctcaagtatagatccc |
303 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||| |
|
|
| T |
12897032 |
gatatgaagatatcttaagttggtcatgtttttaaatgaatcagagctcaagtatagatccc |
12896971 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University