View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4806-Insertion-15 (Length: 197)
Name: NF4806-Insertion-15
Description: NF4806
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4806-Insertion-15 |
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Alignment Details
Target: chr1 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 46 - 194
Target Start/End: Complemental strand, 45768127 - 45767982
Alignment:
| Q |
46 |
gacattttaattaccactttttccacaaaatagaaaaaagaaacatgtttccannnnnnnnnnnnnnnnnn-ggtgtgtggcagctttttaaaatgtaat |
144 |
Q |
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| T |
45768127 |
gacattttaattaccactttttccacaaaatagaaaaaagaaacatgtttccatttttttttttatttttttggtgtgtggcagctttttaaaatgtaat |
45768028 |
T |
|
| Q |
145 |
tactaattaatagtaaccttttgacctgtacttttgtagtgtattctatt |
194 |
Q |
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||||| | |||||| |||||||||||||||||||||||||||||||| |
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| T |
45768027 |
tactagt----agtaacattttgacctgtacttttgtagtgtattctatt |
45767982 |
T |
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