View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4806_low_17 (Length: 370)
Name: NF4806_low_17
Description: NF4806
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4806_low_17 |
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Alignment Details
Target: chr5 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 51 - 300
Target Start/End: Original strand, 13252138 - 13252387
Alignment:
| Q |
51 |
gatataagatttcaactaacaacgcaaaagggtcaaagaaaaacagaaacttgaaatgaatttcagagaaaatagatatgtaccgaattggacaaggaaa |
150 |
Q |
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| T |
13252138 |
gatataagatttcaactaacaacgcaaaagggtcaaagaaaaacagaaacttgaaatgaatttcagagaaaatagatatgtaccgaattggacaaggaaa |
13252237 |
T |
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| Q |
151 |
tcgaaaagacgacgaacattgagagaaatgtgagagatgaattcacgattttcccaatcagcttgaacagcaattccaacattaactgcgtttgtgattc |
250 |
Q |
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| T |
13252238 |
tcgaagagacgacgaacattgagagaaatgtgagagatgaattcacgattttcccaatcagcttgaacagcaattccaacgttaactgcgtttgtgattc |
13252337 |
T |
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| Q |
251 |
ctccagcacgagccattgatggaattcttcgatttcagatccaatgtaga |
300 |
Q |
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| T |
13252338 |
ctccagcacgtgccattgatggaattctttgatttcagatccaatgtaga |
13252387 |
T |
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