View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4806_low_33 (Length: 246)

Name: NF4806_low_33
Description: NF4806
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4806_low_33
NF4806_low_33
[»] chr4 (69 HSPs)
chr4 (4-231)||(10243613-10243840)
chr4 (1-176)||(10243713-10243888)
chr4 (4-231)||(10243493-10243705)
chr4 (46-179)||(10217235-10217368)
chr4 (1-185)||(10217649-10217833)
chr4 (4-191)||(10254414-10254601)
chr4 (30-179)||(10217595-10217744)
chr4 (16-161)||(10243773-10243918)
chr4 (4-191)||(10254474-10254661)
chr4 (1-191)||(10254384-10254574)
chr4 (46-179)||(10217145-10217278)
chr4 (46-179)||(10217325-10217458)
chr4 (67-200)||(10243779-10243912)
chr4 (52-188)||(10217706-10217842)
chr4 (16-231)||(10217648-10217863)
chr4 (64-224)||(10254171-10254331)
chr4 (16-182)||(10264716-10264882)
chr4 (4-161)||(10254099-10254256)
chr4 (4-190)||(10254130-10254316)
chr4 (69-191)||(10264827-10264949)
chr4 (64-181)||(10254589-10254706)
chr4 (4-176)||(10243443-10243615)
chr4 (45-179)||(10217415-10217549)
chr4 (46-188)||(10217556-10217698)
chr4 (49-185)||(10217079-10217215)
chr4 (1-181)||(10254454-10254634)
chr4 (16-128)||(10264620-10264732)
chr4 (49-185)||(10264803-10264939)
chr4 (49-188)||(10217196-10217335)
chr4 (32-179)||(10254366-10254513)
chr4 (64-191)||(10264767-10264894)
chr4 (49-191)||(10217103-10217245)
chr4 (46-164)||(10217190-10217308)
chr4 (65-191)||(10264617-10264743)
chr4 (31-176)||(10243593-10243738)
chr4 (10-110)||(10217589-10217689)
chr4 (37-161)||(10243428-10243552)
chr4 (147-231)||(10243838-10243922)
chr4 (34-185)||(10217289-10217440)
chr4 (49-188)||(10217346-10217485)
chr4 (52-167)||(10217547-10217662)
chr4 (30-188)||(10217466-10217624)
chr4 (10-116)||(10243428-10243534)
chr4 (42-224)||(10243740-10243922)
chr4 (147-224)||(10217790-10217867)
chr4 (46-188)||(10217256-10217398)
chr4 (49-179)||(10217505-10217635)
chr4 (46-176)||(10254534-10254664)
chr4 (19-181)||(10264957-10265119)
chr4 (94-191)||(10265157-10265254)
chr4 (4-56)||(10217193-10217245)
chr4 (4-56)||(10217283-10217335)
chr4 (49-185)||(10217379-10217515)
chr4 (106-194)||(10254096-10254184)
chr4 (112-188)||(10254612-10254688)
chr4 (67-191)||(10265067-10265191)
chr4 (49-188)||(10217616-10217755)
chr4 (10-188)||(10243461-10243654)
chr4 (49-188)||(10254327-10254466)
chr4 (47-185)||(10264923-10265061)
chr4 (46-179)||(10217055-10217188)
chr4 (10-75)||(10243349-10243414)
chr4 (4-191)||(10264677-10264849)
chr4 (67-164)||(10265124-10265221)
chr4 (4-56)||(10217373-10217425)
chr4 (87-131)||(10217823-10217867)
chr4 (4-180)||(10254515-10254691)
chr4 (4-56)||(10264647-10264699)
chr4 (94-178)||(10265140-10265224)


Alignment Details
Target: chr4 (Bit Score: 160; Significance: 2e-85; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 4 - 231
Target Start/End: Complemental strand, 10243840 - 10243613
Alignment:
Q  4 ggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgt 103  Q
    |||||||||||||| ||||| ||||||||||| ||||||||||| |||||||||||||| |||||||| |  || || |||||    || ||||||||||    
T  10243840 ggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtatacaggtggcttcactactggtggcttgt 10243741  T
Q  104 agactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtggcttgtaaacaggaggtttgtagactggggg 203  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10243740 agactgggggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtggcttgtaaacaggaggtttgtagactggggg 10243641  T
Q  204 tttcactactgggggtttgtacacaggt 231  Q
    ||||||||||||||||||||| ||||||    
T  10243640 tttcactactgggggtttgtatacaggt 10243613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 10243888 - 10243713
Alignment:
Q  1 accggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10243888 accggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggct 10243789  T
Q  101 tgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtggctt 176  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| | ||| ||||||||    
T  10243788 tgtagactggaggcttgtatacaggtggcttcactactggtggcttgtagactgggggcttgtaaacaggtggctt 10243713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 4 - 231
Target Start/End: Complemental strand, 10243705 - 10243493
Alignment:
Q  4 ggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgt 103  Q
    ||||||||||| |||||||| ||||||||||| |||||||||||||| || |||||||| || || ||| | ||||| || ||||| || ||||||||||    
T  10243705 ggtggcttgtaaactggaggcttctcaactggtggcttgtaaacaggaggtttgtagactgggggtttcactactgggggtttgtatacaggtggcttgt 10243606  T
Q  104 agactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtggcttgtaaacaggaggtttgtagactggggg 203  Q
    | ||||| ||||| |               |||||||||| ||||||||||| ||||| |  || |||||||||||||||||||||||||||||||||||    
T  10243605 aaactgggggcttct---------------ctactggtggtttgtaaactggtggcttgtacaccggtggcttgtaaacaggaggtttgtagactggggg 10243521  T
Q  204 tttcactactgggggtttgtacacaggt 231  Q
    ||||||||||||||||||||||||||||    
T  10243520 tttcactactgggggtttgtacacaggt 10243493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 46 - 179
Target Start/End: Complemental strand, 10217368 - 10217235
Alignment:
Q  46 acaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggct 145  Q
    |||||||| |||||||||||||||||||||||||| |||||||| || ||||| || |  || || ||||||||||||||||||||| |||| ||||| |    
T  10217368 acaggtggtttgtagaccggaggcttctcaactggtggcttgtacactggtggtttctctacaggtggcttgtaaacaggtggcttctctacaggtggtt 10217269  T
Q  146 tgtaaactggaggcttctcaactggtggcttgta 179  Q
    |||| || |||||||| |||||||||||||||||    
T  10217268 tgtagaccggaggcttttcaactggtggcttgta 10217235  T

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Target: chr4; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 10217833 - 10217649
Alignment:
Q  1 accggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggct 100  Q
    |||||||||||||| ||||||||||||||||||||||| ||||| || || |||||||| || || |||||||| ||||| ||||||||||| || || |    
T  10217833 accggtggcttgtaaactggaggtttctcaactgggggtttgtagaccggaggcttgtacacaggtggcttctctactggtggcttgtaaactggaggtt 10217734  T
Q  101 tgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtggcttgtaaacagg 185  Q
    |||| || || ||||||||||| || |||||| |||| || || ||||| || || || ||||| ||||| |||||||| |||||    
T  10217733 tgtacaccggtggcttgtaaactggaggcttctctacaggaggtttgtagaccgggggtttctcgactgggggcttgtacacagg 10217649  T

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Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 10254601 - 10254414
Alignment:
Q  4 ggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgt 103  Q
    ||||| ||||| | ||| || |||||||| || |||||||| || ||||| || |  || || |||||||||||||| ||||||||| | || ||||| |    
T  10254601 ggtggtttgtaaattgggggcttctcaaccggtggcttgtacactggtggtttctctacaggtggcttctcaactggtggcttgtaagctggaggcttct 10254502  T
Q  104 agactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtggcttgtaaacaggaggttt 191  Q
      ||||| |||||||| |||||||| ||| |||||||||||||||||| ||| ||||||||||||||||||||||| ||||| |||||    
T  10254501 caactggtggcttgtatacaggtggtttctctactggtggcttgtaaattgggggcttctcaactggtggcttgtacacaggtggttt 10254414  T

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Target: chr4; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 30 - 179
Target Start/End: Complemental strand, 10217744 - 10217595
Alignment:
Q  30 aactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggc 129  Q
    |||||| || ||||| || ||||||||||| || ||||||||||| || ||||| ||||| || || || || | |||||| |||||||| |||||||||    
T  10217744 aactggaggtttgtacaccggtggcttgtaaactggaggcttctctacaggaggtttgtagaccgggggtttctcgactgggggcttgtacacaggtggc 10217645  T
Q  130 ttcactactggtggcttgtaaactggaggcttctcaactggtggcttgta 179  Q
    ||| | ||||||||||| |||||||||||||||||||| |||||||||||    
T  10217644 ttctcaactggtggcttataaactggaggcttctcaacaggtggcttgta 10217595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 161
Target Start/End: Complemental strand, 10243918 - 10243773
Alignment:
Q  16 actggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggct 115  Q
    ||||| || ||||| ||||| ||||||||||| |||||||||||||| ||||| ||||||||||| ||||||||||| |||||||||||||| |||||||    
T  10243918 actggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggct 10243819  T
Q  116 tgtaaacaggtggcttcactactggtggcttgtaaactggaggctt 161  Q
    | | ||| || |||||    || ||||||||||| |||||||||||    
T  10243818 tctcaactggaggcttgtaaacgggtggcttgtagactggaggctt 10243773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 10254661 - 10254474
Alignment:
Q  4 ggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgt 103  Q
    |||||||||||||| || ||||||||||| || |||||||| || || ||||| |  || || || || | || ||| ||||| | ||| ||||||||||    
T  10254661 ggtggcttgtagacaggtggtttctcaaccggtggcttgtacactggaggcttctcaactggtggtttgtaaattgggggcttctcaaccggtggcttgt 10254562  T
Q  104 agactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtggcttgtaaacaggaggttt 191  Q
    | ||||| || || |  |||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||    
T  10254561 acactggtggtttctctacaggtggcttctcaactggtggcttgtaagctggaggcttctcaactggtggcttgtatacaggtggttt 10254474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 10254574 - 10254384
Alignment:
Q  1 accggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggct 100  Q
    |||||||||||||| ||||| |||||||| || || ||||| | ||| |||||||||||  | ||||||||||||||||| |||||||| || ||||| |    
T  10254574 accggtggcttgtacactggtggtttctctacaggtggcttctcaactggtggcttgtaagctggaggcttctcaactggtggcttgtatacaggtggtt 10254475  T
Q  101 tgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtggcttgtaaacaggaggttt 191  Q
    | |  ||||| ||||||||||  || |||||| | |||||||||||||| || || || ||||| ||||||||||| ||||| || |||||    
T  10254474 tctctactggtggcttgtaaattgggggcttctcaactggtggcttgtacacaggtggtttctctactggtggcttataaaccgggggttt 10254384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 46 - 179
Target Start/End: Complemental strand, 10217278 - 10217145
Alignment:
Q  46 acaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggct 145  Q
    |||||||| ||||||||||||||||| |||||||| |||||||| || ||||| || |  ||||| |||||||||||||| |||||| |||| || || |    
T  10217278 acaggtggtttgtagaccggaggcttttcaactggtggcttgtacactggtggtttctctactggtggcttgtaaacaggaggcttctctacaggaggtt 10217179  T
Q  146 tgtaaactggaggcttctcaactggtggcttgta 179  Q
    |||| || || |||||||||||||||||||||||    
T  10217178 tgtagacggggggcttctcaactggtggcttgta 10217145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 46 - 179
Target Start/End: Complemental strand, 10217458 - 10217325
Alignment:
Q  46 acaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggct 145  Q
    ||||| || ||||||||||| |||||||||||||| |||||||| || ||||| || |  || || ||||| ||||||||||||||| |||| ||||| |    
T  10217458 acagggggtttgtagaccgggggcttctcaactggtggcttgtacactggtggtttctctacaggtggcttataaacaggtggcttctctacaggtggtt 10217359  T
Q  146 tgtaaactggaggcttctcaactggtggcttgta 179  Q
    |||| || ||||||||||||||||||||||||||    
T  10217358 tgtagaccggaggcttctcaactggtggcttgta 10217325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 67 - 200
Target Start/End: Complemental strand, 10243912 - 10243779
Alignment:
Q  67 ggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaa 166  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||| || | ||| || |||||    || ||||||||||| || |||||||||||||    
T  10243912 ggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaa 10243813  T
Q  167 ctggtggcttgtaaacaggaggtttgtagactgg 200  Q
    |||| ||||||||||| || || |||||||||||    
T  10243812 ctggaggcttgtaaacgggtggcttgtagactgg 10243779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 52 - 188
Target Start/End: Complemental strand, 10217842 - 10217706
Alignment:
Q  52 ggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaa 151  Q
    |||||||| ||||| ||||| | ||||||||| || | ||| || || |||||||| ||||||||||| |||||||||||| ||||||||||||||||||    
T  10217842 ggcttgtaaaccggtggcttgtaaactggaggtttctcaactgggggtttgtagaccggaggcttgtacacaggtggcttctctactggtggcttgtaaa 10217743  T
Q  152 ctggaggcttctcaactggtggcttgtaaacaggagg 188  Q
    ||||||| || |  || |||||||||||||| |||||    
T  10217742 ctggaggtttgtacaccggtggcttgtaaactggagg 10217706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 231
Target Start/End: Complemental strand, 10217863 - 10217648
Alignment:
Q  16 actggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggct 115  Q
    ||||| || ||||| ||||| ||||||||||| ||||||||||| || ||||| ||||||||||| || ||||| || || |||||||| || || ||||    
T  10217863 actggtggcttctcgactggaggcttgtaaaccggtggcttgtaaactggaggtttctcaactgggggtttgtagaccggaggcttgtacacaggtggct 10217764  T
Q  116 tgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtggcttgtaaacaggaggtttgtagactgggggtttcactactgg 215  Q
    | |  || ||||||||    ||||| || ||||| || || ||||| | |||||| ||||| |  ||||||||||||||||| ||||||||| | |||||    
T  10217763 tctctactggtggcttgtaaactggaggtttgtacaccggtggcttgtaaactggaggcttctctacaggaggtttgtagaccgggggtttctcgactgg 10217664  T
Q  216 gggtttgtacacaggt 231  Q
    ||| ||||||||||||    
T  10217663 gggcttgtacacaggt 10217648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 64 - 224
Target Start/End: Complemental strand, 10254331 - 10254171
Alignment:
Q  64 ggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttct 163  Q
    |||||||| || || || |||||||| || |||||||| |  || || |||||||| || ||||||||  |||| ||||||||||| |||||||| ||||    
T  10254331 ggaggcttttctacaggtggcttgtacactggtggcttttctacaggtggcttgtacactggtggcttttctacaggtggcttgtacactggaggtttct 10254232  T
Q  164 caactggtggcttgtaaacaggaggtttgtagactgggggtttcactactgggggtttgta 224  Q
    ||||||| ||||||||||||||||||| ||| || || |||||| ||||||| || |||||    
T  10254231 caactgggggcttgtaaacaggaggttggtaaacaggaggtttctctactggtggcttgta 10254171  T

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Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 10264882 - 10264716
Alignment:
Q  16 actggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggct 115  Q
    ||||||||||| | |||||||||||| | ||| ||||||||||| |||||||| ||||| || || ||||||||||| ||| |||| |  ||||| ||||    
T  10264882 actggaggtttgtgaactgggggcttctcaactggtggcttgtacaccggaggtttctctacaggtggcttgtaaacaggtagcttctcaactggtggct 10264783  T
Q  116 tgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtggcttgtaaac 182  Q
    |||  |||||||| ||  | |||||||||||||  ||| |||||||||| ||||| || ||||||||    
T  10264782 tgtgtacaggtggtttatcaactggtggcttgtgcactagaggcttctctactggaggtttgtaaac 10264716  T

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Target: chr4; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 161
Target Start/End: Complemental strand, 10254256 - 10254099
Alignment:
Q  4 ggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgt 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| || | ||| || ||||| ||||| ||||| ||||||||||  || ||||| |    
T  10254256 ggtggcttgtacactggaggtttctcaactgggggcttgtaaacaggaggttggtaaacaggaggtttctctactggtggcttgtaaattggaggcttct 10254157  T
Q  104 agactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggctt 161  Q
      ||||| ||||| || || || || | | |||||||||| ||||| || ||||||||    
T  10254156 ctactggtggcttatagacgggaggttgctctactggtggtttgtatacaggaggctt 10254099  T

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Target: chr4; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 190
Target Start/End: Complemental strand, 10254316 - 10254130
Alignment:
Q  4 ggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgt 103  Q
    ||||||||||| ||||| || || || || || |||||||| || |||||||| |  || || ||||| |  |||||||| || | ||| || |||||||    
T  10254316 ggtggcttgtacactggtggcttttctacaggtggcttgtacactggtggcttttctacaggtggcttgtacactggaggtttctcaactgggggcttgt 10254217  T
Q  104 agactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtggcttgtaaacaggaggtt 190  Q
    | || ||||| | ||||||||| || ||| |||||||||||||||||| |||||||||||| ||||||||||| || || |||||||    
T  10254216 aaacaggaggttggtaaacaggaggtttctctactggtggcttgtaaattggaggcttctctactggtggcttatagacgggaggtt 10254130  T

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Target: chr4; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 69 - 191
Target Start/End: Complemental strand, 10264949 - 10264827
Alignment:
Q  69 cttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaact 168  Q
    |||||||||||| |||||||| || |||||||| |  ||| |||| |||| ||| || |||||| ||||||| || |||| |||||| ||||||||||||    
T  10264949 cttctcaactggtggcttgtatacaggtggcttctccacttgaggtttgtgaactggaggcttctctactggaggtttgtgaactgggggcttctcaact 10264850  T
Q  169 ggtggcttgtaaacaggaggttt 191  Q
    ||||||||||| || ||||||||    
T  10264849 ggtggcttgtacaccggaggttt 10264827  T

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Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 181
Target Start/End: Complemental strand, 10254706 - 10254589
Alignment:
Q  64 ggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttct 163  Q
    ||||| ||||||| ||| ||||||||||| ||||| || |  || || |||||||| |||||||| ||| | || ||||||||||| |||||||||||||    
T  10254706 ggaggtttctcaaatggtggcttgtaaacaggtggattttctacaggtggcttgtagacaggtggtttctcaaccggtggcttgtacactggaggcttct 10254607  T
Q  164 caactggtggcttgtaaa 181  Q
    |||||||||| |||||||    
T  10254606 caactggtggtttgtaaa 10254589  T

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Target: chr4; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 176
Target Start/End: Complemental strand, 10243615 - 10243443
Alignment:
Q  4 ggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgt 103  Q
    ||||||||||| ||||| || ||||| ||||| || |||||||| ||||||||||| ||||| ||||| | ||| ||||| ||||| || || || ||      
T  10243615 ggtggcttgtaaactgggggcttctctactggtggtttgtaaactggtggcttgtacaccggtggcttgtaaacaggaggtttgtagactgggggtttca 10243516  T
Q  104 agactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtggctt 176  Q
      ||||| || ||||| |||||||||||    || ||||| |||||||||||||||||||| |||||||||||    
T  10243515 ctactgggggtttgtacacaggtggcttgtacaccggtggtttgtaaactggaggcttctctactggtggctt 10243443  T

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Target: chr4; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 45 - 179
Target Start/End: Complemental strand, 10217549 - 10217415
Alignment:
Q  45 aacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggc 144  Q
    |||||| || ||||||||||| || ||||||||||| |||||||| || || || || |  ||||| |||||||| ||||| |||||| |||| || ||     
T  10217549 aacagggggtttgtagaccgggggtttctcaactggtggcttgtacactggcggtttctctactggtggcttgtagacaggaggcttctctacagggggt 10217450  T
Q  145 ttgtaaactggaggcttctcaactggtggcttgta 179  Q
    ||||| || || |||||||||||||||||||||||    
T  10217449 ttgtagaccgggggcttctcaactggtggcttgta 10217415  T

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Target: chr4; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 46 - 188
Target Start/End: Complemental strand, 10217698 - 10217556
Alignment:
Q  46 acaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggct 145  Q
    ||||| || ||||||||||| || ||||| ||||| |||||||| || |||||||| |  ||||| ||||| ||||| || |||||| | || |||||||    
T  10217698 acaggaggtttgtagaccgggggtttctcgactgggggcttgtacacaggtggcttctcaactggtggcttataaactggaggcttctcaacaggtggct 10217599  T
Q  146 tgtaaactggaggcttctcaactggtggcttgtaaacaggagg 188  Q
    |||| ||||| || ||||| |||||||||||||| | ||||||    
T  10217598 tgtacactggtggtttctctactggtggcttgtagataggagg 10217556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 49 - 185
Target Start/End: Complemental strand, 10217215 - 10217079
Alignment:
Q  49 ggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgt 148  Q
    ||||||||||| || ||||||||||| || ||||| ||||| ||||| ||||| |  ||||| |||||||| || ||||| ||| |||| ||||| ||||    
T  10217215 ggtggcttgtaaacaggaggcttctctacaggaggtttgtagacggggggcttctcaactggtggcttgtacactggtggtttctctaccggtggtttgt 10217116  T
Q  149 aaactggaggcttctcaactggtggcttgtaaacagg 185  Q
    |||||||||| || || || |||||||| || |||||    
T  10217115 aaactggaggtttttctaccggtggcttatacacagg 10217079  T

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Target: chr4; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 10254634 - 10254454
Alignment:
Q  1 accggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggct 100  Q
    |||||||||||||| |||||||| ||||||||||| || |||||||  || ||||| |  ||||| ||||| |  ||||| || || |  || |||||||    
T  10254634 accggtggcttgtacactggaggcttctcaactggtggtttgtaaattgggggcttctcaaccggtggcttgtacactggtggtttctctacaggtggct 10254535  T
Q  101 tgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtggcttgtaaa 181  Q
    | |  ||||| ||||||||| | || |||||| | |||||||||||||| || || || ||||| ||||||||||||||||    
T  10254534 tctcaactggtggcttgtaagctggaggcttctcaactggtggcttgtatacaggtggtttctctactggtggcttgtaaa 10254454  T

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Target: chr4; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 10264732 - 10264620
Alignment:
Q  16 actggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggct 115  Q
    ||||||||||| | |||||||||||| | ||||||||||||||| |||||||| ||||| || || ||||||||||| ||| |||| |  ||||| ||||    
T  10264732 actggaggtttgtaaactgggggcttctcaacaggtggcttgtacaccggaggtttctctacaggtggcttgtaaacaggtagcttctcaactggtggct 10264633  T
Q  116 tgtaaacaggtgg 128  Q
    |||  ||||||||    
T  10264632 tgtgtacaggtgg 10264620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 49 - 185
Target Start/End: Complemental strand, 10264939 - 10264803
Alignment:
Q  49 ggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgt 148  Q
    ||||||||||| || || |||||||| ||| |||| |||| ||| || ||||| |  |||||||| |||| ||| || |||||| | |||||||||||||    
T  10264939 ggtggcttgtatacaggtggcttctccacttgaggtttgtgaactggaggcttctctactggaggtttgtgaactgggggcttctcaactggtggcttgt 10264840  T
Q  149 aaactggaggcttctcaactggtggcttgtaaacagg 185  Q
    | || ||||| ||||| || |||||||||||||||||    
T  10264839 acaccggaggtttctctacaggtggcttgtaaacagg 10264803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 188
Target Start/End: Complemental strand, 10217335 - 10217196
Alignment:
Q  49 ggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgt 148  Q
    ||||||||||| || || || ||||| || || ||||||||||| |||||||| |  || || || ||||| || || |||||  | |||||||||||||    
T  10217335 ggtggcttgtacactggtggtttctctacaggtggcttgtaaacaggtggcttctctacaggtggtttgtagaccggaggcttttcaactggtggcttgt 10217236  T
Q  149 aaactggaggcttctcaactggtggcttgtaaacaggagg 188  Q
    | ||||| || ||||| |||||||||||||||||||||||    
T  10217235 acactggtggtttctctactggtggcttgtaaacaggagg 10217196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 10254513 - 10254366
Alignment:
Q  32 ctgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggctt 131  Q
    |||| ||||| | ||| ||||||||||| || || || ||||| ||||| ||||||||||  || ||||| |  ||||| |||||||| |||||||| ||    
T  10254513 ctggaggcttctcaactggtggcttgtatacaggtggtttctctactggtggcttgtaaattgggggcttctcaactggtggcttgtacacaggtggttt 10254414  T
Q  132 cactactggtggcttgtaaactggaggcttctcaactggtggcttgta 179  Q
    | ||||||||||||| ||||| || || |||||||| ||||| |||||    
T  10254413 ctctactggtggcttataaaccgggggtttctcaacgggtggtttgta 10254366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 64 - 191
Target Start/End: Complemental strand, 10264894 - 10264767
Alignment:
Q  64 ggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttct 163  Q
    ||||||||||| |||||||| |||| ||| || ||||| |  ||||| |||||||| || || || ||| |||| |||||||||||||| ||  ||||||    
T  10264894 ggaggcttctctactggaggtttgtgaactgggggcttctcaactggtggcttgtacaccggaggtttctctacaggtggcttgtaaacaggtagcttct 10264795  T
Q  164 caactggtggcttgtaaacaggaggttt 191  Q
    |||||||||||||||  ||||| |||||    
T  10264794 caactggtggcttgtgtacaggtggttt 10264767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 191
Target Start/End: Complemental strand, 10217245 - 10217103
Alignment:
Q  49 ggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgt 148  Q
    ||||||||||| || || || ||||| ||||| ||||||||||| || ||||| |  || ||||| ||||| || || |||||| | |||||||||||||    
T  10217245 ggtggcttgtacactggtggtttctctactggtggcttgtaaacaggaggcttctctacaggaggtttgtagacggggggcttctcaactggtggcttgt 10217146  T
Q  149 aaactggaggcttctcaactggtggcttgtaaacaggaggttt 191  Q
    | ||||| || ||||| || ||||| |||||||| ||||||||    
T  10217145 acactggtggtttctctaccggtggtttgtaaactggaggttt 10217103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 164
Target Start/End: Complemental strand, 10217308 - 10217190
Alignment:
Q  46 acaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggct 145  Q
    |||||||||||||| || || |||||||| || || || ||||| || || ||||| |  ||||| |||||||| || ||||| ||| ||||||||||||    
T  10217308 acaggtggcttgtaaacaggtggcttctctacaggtggtttgtagaccggaggcttttcaactggtggcttgtacactggtggtttctctactggtggct 10217209  T
Q  146 tgtaaactggaggcttctc 164  Q
    ||||||| |||||||||||    
T  10217208 tgtaaacaggaggcttctc 10217190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 191
Target Start/End: Complemental strand, 10264743 - 10264617
Alignment:
Q  65 gaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctc 164  Q
    |||||||||| |||||||| |||||||| || ||||| |  || || |||||||| || || || ||| |||| |||||||||||||| ||  |||||||    
T  10264743 gaggcttctctactggaggtttgtaaactgggggcttctcaacaggtggcttgtacaccggaggtttctctacaggtggcttgtaaacaggtagcttctc 10264644  T
Q  165 aactggtggcttgtaaacaggaggttt 191  Q
    ||||||||||||||  ||||| |||||    
T  10264643 aactggtggcttgtgtacaggtggttt 10264617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 176
Target Start/End: Complemental strand, 10243738 - 10243593
Alignment:
Q  31 actgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggct 130  Q
    ||||||||||||||||||||||||||    || || ||||| | |||||||||||| | ||| ||||||||||| || ||||| ||||| || || || |    
T  10243738 actgggggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtggcttgtaaacaggaggtttgtagactgggggtt 10243639  T
Q  131 tcactactggtggcttgtaaactggaggcttctcaactggtggctt 176  Q
    |||||||||| || ||||| || || ||||| | |||||| |||||    
T  10243638 tcactactgggggtttgtatacaggtggcttgtaaactgggggctt 10243593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 10217689 - 10217589
Alignment:
Q  10 ttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactg 109  Q
    |||||||| || |||||||| |||||||||||||| ||||||||||| |  || || ||||| | |||||||||||| | ||| ||||||||||| ||||    
T  10217689 ttgtagaccgggggtttctcgactgggggcttgtacacaggtggcttctcaactggtggcttataaactggaggcttctcaacaggtggcttgtacactg 10217590  T
Q  110 g 110  Q
    |    
T  10217589 g 10217589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 161
Target Start/End: Complemental strand, 10243552 - 10243428
Alignment:
Q  37 ggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcacta 136  Q
    |||||||||||||| || |||||||| || || ||| | ||||| || ||||| || ||||||||||| || || || |||||||| || |||||| |||    
T  10243552 ggcttgtaaacaggaggtttgtagactgggggtttcactactgggggtttgtacacaggtggcttgtacaccggtggtttgtaaactggaggcttctcta 10243453  T
Q  137 ctggtggcttgtaaactggaggctt 161  Q
    |||||||||| || ||||| |||||    
T  10243452 ctggtggcttatatactggtggctt 10243428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 10243922 - 10243838
Alignment:
Q  147 gtaaactggaggcttctcaactggtggcttgtaaacaggaggtttgtagactgggggtttcactactgggggtttgtacacaggt 231  Q
    ||||||||| |||||||| ||||| ||||||||||| || || ||||||||||| |||||| | |||||||| ||||| ||||||    
T  10243922 gtaaactggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggt 10243838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 185
Target Start/End: Complemental strand, 10217440 - 10217289
Alignment:
Q  34 gggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttca 133  Q
    |||||||| | ||| ||||||||||| || || || ||||| || || ||||| ||||| |||||||| |  || || || ||||| || || ||||||     
T  10217440 gggggcttctcaactggtggcttgtacactggtggtttctctacaggtggcttataaacaggtggcttctctacaggtggtttgtagaccggaggcttct 10217341  T
Q  134 ctactggtggcttgtaaactggaggcttctcaactggtggcttgtaaacagg 185  Q
    | |||||||||||||| ||||| || ||||| || |||||||||||||||||    
T  10217340 caactggtggcttgtacactggtggtttctctacaggtggcttgtaaacagg 10217289  T

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Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 49 - 188
Target Start/End: Complemental strand, 10217485 - 10217346
Alignment:
Q  49 ggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgt 148  Q
    |||||||||||||| ||||||||||| || || || ||||| || || ||||| |  ||||| |||||||| || ||||| ||| |||| |||||||| |    
T  10217485 ggtggcttgtagacaggaggcttctctacagggggtttgtagaccgggggcttctcaactggtggcttgtacactggtggtttctctacaggtggcttat 10217386  T
Q  149 aaactggaggcttctcaactggtggcttgtaaacaggagg 188  Q
    |||| || |||||||| || ||||| ||||| || |||||    
T  10217385 aaacaggtggcttctctacaggtggtttgtagaccggagg 10217346  T

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Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 167
Target Start/End: Complemental strand, 10217662 - 10217547
Alignment:
Q  52 ggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaa 151  Q
    |||||||| || || |||||||||||||| ||||| ||||| || ||||| |  || || |||||||| || ||||| ||| |||||||||||||||| |    
T  10217662 ggcttgtacacaggtggcttctcaactggtggcttataaactggaggcttctcaacaggtggcttgtacactggtggtttctctactggtggcttgtaga 10217563  T
Q  152 ctggaggcttctcaac 167  Q
      ||||||||||||||    
T  10217562 taggaggcttctcaac 10217547  T

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Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 188
Target Start/End: Complemental strand, 10217624 - 10217466
Alignment:
Q  30 aactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggc 129  Q
    |||||| ||||| | ||||||||||||||| || || || ||||| ||||| |||||||| |  || ||||| |  || || || ||||| || || ||     
T  10217624 aactggaggcttctcaacaggtggcttgtacactggtggtttctctactggtggcttgtagataggaggcttctcaacagggggtttgtagaccgggggt 10217525  T
Q  130 ttcactactggtggcttgtaaactggaggcttctcaactggtggcttgtaaacaggagg 188  Q
    ||| | |||||||||||||| ||||| || ||||| |||||||||||||| ||||||||    
T  10217524 ttctcaactggtggcttgtacactggcggtttctctactggtggcttgtagacaggagg 10217466  T

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Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 116
Target Start/End: Complemental strand, 10243534 - 10243428
Alignment:
Q  10 ttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactg 109  Q
    ||||||||||| |||||| | |||||||| ||||| |||||||||||||| ||||| || || | |||||||||||| |  || |||||||| || ||||    
T  10243534 ttgtagactgggggtttcactactgggggtttgtacacaggtggcttgtacaccggtggtttgtaaactggaggcttctctactggtggcttatatactg 10243435  T
Q  110 gaggctt 116  Q
    | |||||    
T  10243434 gtggctt 10243428  T

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Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 224
Target Start/End: Complemental strand, 10243922 - 10243740
Alignment:
Q  42 gtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggt 141  Q
    |||||| |||||||| | ||| |||||||| | ||| || |||||||| || || || || |  ||||| ||||||||||||||||||||    || ||     
T  10243922 gtaaactggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccgga 10243823  T
Q  142 ggcttgtaaactggaggcttctcaactggtggcttgtaaacaggaggtttgtagactgggggtttcactactgggggtttgta 224  Q
    ||||| | |||||||||||| | ||| ||||||||||| || ||||| ||||| || || || ||||||||||| || |||||    
T  10243822 ggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtatacaggtggcttcactactggtggcttgta 10243740  T

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Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 224
Target Start/End: Complemental strand, 10217867 - 10217790
Alignment:
Q  147 gtaaactggaggcttctcaactggtggcttgtaaacaggaggtttgtagactgggggtttcactactgggggtttgta 224  Q
    ||||||||| |||||||| ||||| ||||||||||| || || ||||| ||||| |||||| | ||||||||||||||    
T  10217867 gtaaactggtggcttctcgactggaggcttgtaaaccggtggcttgtaaactggaggtttctcaactgggggtttgta 10217790  T

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Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 46 - 188
Target Start/End: Complemental strand, 10217398 - 10217256
Alignment:
Q  46 acaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggct 145  Q
    ||||||||||| || || || |||||||| || || || ||||| || || ||||| |  ||||| |||||||| || ||||| ||| |||| |||||||    
T  10217398 acaggtggcttataaacaggtggcttctctacaggtggtttgtagaccggaggcttctcaactggtggcttgtacactggtggtttctctacaggtggct 10217299  T
Q  146 tgtaaactggaggcttctcaactggtggcttgtaaacaggagg 188  Q
    ||||||| || |||||||| || ||||| ||||| || |||||    
T  10217298 tgtaaacaggtggcttctctacaggtggtttgtagaccggagg 10217256  T

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Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 179
Target Start/End: Complemental strand, 10217635 - 10217505
Alignment:
Q  49 ggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgt 148  Q
    |||||||| || || |||||||||||||| || |||||||| || ||||| || |  ||||| |||||||| | ||| |||||| | || || || ||||    
T  10217635 ggtggcttataaactggaggcttctcaacaggtggcttgtacactggtggtttctctactggtggcttgtagataggaggcttctcaacagggggtttgt 10217536  T
Q  149 aaactggaggcttctcaactggtggcttgta 179  Q
    | || || || ||||||||||||||||||||    
T  10217535 agaccgggggtttctcaactggtggcttgta 10217505  T

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Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 46 - 176
Target Start/End: Complemental strand, 10254664 - 10254534
Alignment:
Q  46 acaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggct 145  Q
    ||||||||||||||||| || || |||||||| || |||||||| || || ||||| |  ||||| || |||||||  || |||||| | || |||||||    
T  10254664 acaggtggcttgtagacaggtggtttctcaaccggtggcttgtacactggaggcttctcaactggtggtttgtaaattgggggcttctcaaccggtggct 10254565  T
Q  146 tgtaaactggaggcttctcaactggtggctt 176  Q
    |||| ||||| || ||||| || ||||||||    
T  10254564 tgtacactggtggtttctctacaggtggctt 10254534  T

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Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 181
Target Start/End: Complemental strand, 10265119 - 10264957
Alignment:
Q  19 ggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgt 118  Q
    |||||||| | |||||||| ||| | ||| ||||||||||| |||||||| ||||   | || ||||||||||  ||| |||| |  ||||| |||||||    
T  10265119 ggaggtttgtaaactggggacttctcaactggtggcttgtacaccggaggtttctttgcaggtggcttgtaaaaaggtagcttctcaactggtggcttgt 10265020  T
Q  119 aaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtggcttgtaaa 181  Q
      |||||||| ||| | ||| |||||||||  |||||||||||||| ||| | || |||||||    
T  10265019 gtacaggtggtttctcaactcgtggcttgtgcactggaggcttctctactagaggtttgtaaa 10264957  T

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Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 191
Target Start/End: Complemental strand, 10265254 - 10265157
Alignment:
Q  94 ggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtggcttgtaaacaggaggttt 191  Q
    |||||| | |||| ||||||  ||||||  ||||||||| | | ||| ||||||| |||||| |||||||||| |||||||||||| ||||| |||||    
T  10265254 ggtggcatctagaatggaggtgtgtaaatcggtggcttctcgaatggaggcttgtgaactgggggcttctcaattggtggcttgtatacaggtggttt 10265157  T

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Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 10217245 - 10217193
Alignment:
Q  4 ggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggctt 56  Q
    ||||||||||| ||||| |||||||| ||||| |||||||||||||| |||||    
T  10217245 ggtggcttgtacactggtggtttctctactggtggcttgtaaacaggaggctt 10217193  T

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Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 10217335 - 10217283
Alignment:
Q  4 ggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggctt 56  Q
    ||||||||||| ||||| |||||||| || || ||||||||||||||||||||    
T  10217335 ggtggcttgtacactggtggtttctctacaggtggcttgtaaacaggtggctt 10217283  T

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Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 185
Target Start/End: Complemental strand, 10217515 - 10217379
Alignment:
Q  49 ggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgt 148  Q
    ||||||||||| || || || ||||| ||||| |||||||| || || ||||| |  || || || ||||| || || |||||| | |||||||||||||    
T  10217515 ggtggcttgtacactggcggtttctctactggtggcttgtagacaggaggcttctctacagggggtttgtagaccgggggcttctcaactggtggcttgt 10217416  T
Q  149 aaactggaggcttctcaactggtggcttgtaaacagg 185  Q
    | ||||| || ||||| || |||||||| ||||||||    
T  10217415 acactggtggtttctctacaggtggcttataaacagg 10217379  T

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Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 194
Target Start/End: Complemental strand, 10254184 - 10254096
Alignment:
Q  106 actggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtggcttgtaaacaggaggtttgta 194  Q
    ||||| ||||||||||  || |||||| ||||||||||||| || || ||||| | ||| |||||||| ||||| |||||||| |||||    
T  10254184 actggtggcttgtaaattggaggcttctctactggtggcttatagacgggaggttgctctactggtggtttgtatacaggaggcttgta 10254096  T

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Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 188
Target Start/End: Complemental strand, 10254688 - 10254612
Alignment:
Q  112 ggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtggcttgtaaacaggagg 188  Q
    ||||||||||||||||| ||  |||| ||||||||||| || || || |||||||| ||||||||||| || |||||    
T  10254688 ggcttgtaaacaggtggattttctacaggtggcttgtagacaggtggtttctcaaccggtggcttgtacactggagg 10254612  T

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Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 191
Target Start/End: Complemental strand, 10265191 - 10265067
Alignment:
Q  67 ggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaa 166  Q
    |||||||||| ||| |||||||| || ||||| || |  || || |||||||  || || |||||| |||  || || ||||||||||| | ||||||||    
T  10265191 ggcttctcaattggtggcttgtatacaggtggtttctcaaccggtggcttgtgcactggaggcttctctaacggaggtttgtaaactggggacttctcaa 10265092  T
Q  167 ctggtggcttgtaaacaggaggttt 191  Q
    ||||||||||||| || ||||||||    
T  10265091 ctggtggcttgtacaccggaggttt 10265067  T

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Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 188
Target Start/End: Complemental strand, 10217755 - 10217616
Alignment:
Q  49 ggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgt 148  Q
    ||||||||||| || ||||| || |  || || ||||||||||| || ||||| |  || ||||| ||||| || || || ||| | ||||| |||||||    
T  10217755 ggtggcttgtaaactggaggtttgtacaccggtggcttgtaaactggaggcttctctacaggaggtttgtagaccgggggtttctcgactgggggcttgt 10217656  T
Q  149 aaactggaggcttctcaactggtggcttgtaaacaggagg 188  Q
    | || || |||||||||||||||||||| ||||| |||||    
T  10217655 acacaggtggcttctcaactggtggcttataaactggagg 10217616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 188
Target Start/End: Complemental strand, 10243654 - 10243461
Alignment:
Q  10 ttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactg 109  Q
    ||||||||||| |||||| | |||||||| ||||| |||||||||||||| || || |||||||| ||||| || |||||||| ||||||||||| || |    
T  10243654 ttgtagactgggggtttcactactgggggtttgtatacaggtggcttgtaaactgggggcttctctactggtggtttgtaaactggtggcttgtacaccg 10243555  T
Q  110 gaggcttgtaaacaggtggctt---------------cactactggtggcttgtaaactggaggcttctcaactggtggcttgtaaacaggagg 188  Q
    | |||||||||||||| || ||               ||||||||| || ||||| || || ||||| |  || ||||| |||||||| |||||    
T  10243554 gtggcttgtaaacaggaggtttgtagactgggggtttcactactgggggtttgtacacaggtggcttgtacaccggtggtttgtaaactggagg 10243461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 188
Target Start/End: Complemental strand, 10254466 - 10254327
Alignment:
Q  49 ggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgt 148  Q
    ||||||||||| |  || |||||||||||||| |||||||| || ||||| || |  ||||| ||||| ||||| || || ||| | || ||||| ||||    
T  10254466 ggtggcttgtaaattgggggcttctcaactggtggcttgtacacaggtggtttctctactggtggcttataaaccgggggtttctcaacgggtggtttgt 10254367  T
Q  149 aaactggaggcttctcaactggtggcttgtaaacaggagg 188  Q
    | ||||| || ||||| |||||||| ||||| | ||||||    
T  10254366 acactggtggtttctctactggtggtttgtatataggagg 10254327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 185
Target Start/End: Complemental strand, 10265061 - 10264923
Alignment:
Q  47 caggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggctt 146  Q
    ||||||||||||| |  ||  ||||||||||||| |||||||  || ||||| || |  ||| | |||||||  || || |||||| ||||| | || ||    
T  10265061 caggtggcttgtaaaaaggtagcttctcaactggtggcttgtgtacaggtggtttctcaactcgtggcttgtgcactggaggcttctctactagaggttt 10264962  T
Q  147 gtaaactggaggcttctcaactggtggcttgtaaacagg 185  Q
    ||||| ||||  ||||||||||||||||||||| |||||    
T  10264961 gtaaattggaaacttctcaactggtggcttgtatacagg 10264923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 179
Target Start/End: Complemental strand, 10217188 - 10217055
Alignment:
Q  46 acaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggct 145  Q
    ||||| || |||||||| || |||||||||||||| |||||||| || ||||| || |  || || || |||||||| || || ||  |||| |||||||    
T  10217188 acaggaggtttgtagacggggggcttctcaactggtggcttgtacactggtggtttctctaccggtggtttgtaaactggaggtttttctaccggtggct 10217089  T
Q  146 tgtaaactggaggcttctcaactggtggcttgta 179  Q
    | || || || ||||||||||| || ||||||||    
T  10217088 tatacacaggtggcttctcaacagggggcttgta 10217055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 75
Target Start/End: Complemental strand, 10243414 - 10243349
Alignment:
Q  10 ttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctca 75  Q
    |||||||| || |||||||||||||| ||||| || || ||||| | ||| |||||||||||||||    
T  10243414 ttgtagaccgggggtttctcaactggtggcttatacaccggtggttggtaaaccggaggcttctca 10243349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 10264849 - 10264677
Alignment:
Q  4 ggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgt 103  Q
    ||||||||||| || ||||||||||| || || |||||||||||||||                ||||||||||||| |||||||  || ||||| || |    
T  10264849 ggtggcttgtacaccggaggtttctctacaggtggcttgtaaacaggt---------------agcttctcaactggtggcttgtgtacaggtggtttat 10264765  T
Q  104 agactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtggcttgtaaacaggaggttt 191  Q
      ||||| |||||||  ||  | |||||| ||||||| || ||||||||||| ||||||||||| ||||||||||| || ||||||||    
T  10264764 caactggtggcttgtgcactagaggcttctctactggaggtttgtaaactgggggcttctcaacaggtggcttgtacaccggaggttt 10264677  T

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Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 164
Target Start/End: Complemental strand, 10265221 - 10265124
Alignment:
Q  67 ggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctc 164  Q
    |||||||| | ||||||||||| ||| || ||||| |  | ||| |||||||| |||||||| ||| | || ||||||||||  ||||||||||||||    
T  10265221 ggcttctcgaatggaggcttgtgaactgggggcttctcaattggtggcttgtatacaggtggtttctcaaccggtggcttgtgcactggaggcttctc 10265124  T

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Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 10217425 - 10217373
Alignment:
Q  4 ggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggctt 56  Q
    ||||||||||| ||||| |||||||| || || ||||| ||||||||||||||    
T  10217425 ggtggcttgtacactggtggtttctctacaggtggcttataaacaggtggctt 10217373  T

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Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 10217867 - 10217823
Alignment:
Q  87 gtaaacgggtggcttgtagactggaggcttgtaaacaggtggctt 131  Q
    |||||| |||||||| | |||||||||||||||||| ||||||||    
T  10217867 gtaaactggtggcttctcgactggaggcttgtaaaccggtggctt 10217823  T

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Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 180
Target Start/End: Complemental strand, 10254691 - 10254515
Alignment:
Q  4 ggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgt 103  Q
    ||||||||||| || || || || || || || |||||||| |||||||| || |  ||||| ||||| |  ||||||||||| | ||| ||||| ||||    
T  10254691 ggtggcttgtaaacaggtggattttctacaggtggcttgtagacaggtggtttctcaaccggtggcttgtacactggaggcttctcaactggtggtttgt 10254592  T
Q  104 agactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtggcttgtaa 180  Q
    | | ||| ||||| | ||| ||||||||    |||||||| || |  || || ||||||||||||||||||||||||    
T  10254591 aaattgggggcttctcaaccggtggcttgtacactggtggtttctctacaggtggcttctcaactggtggcttgtaa 10254515  T

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Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 10264699 - 10264647
Alignment:
Q  4 ggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggctt 56  Q
    ||||||||||| || ||||||||||| || || ||||||||||||||| ||||    
T  10264699 ggtggcttgtacaccggaggtttctctacaggtggcttgtaaacaggtagctt 10264647  T

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Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 178
Target Start/End: Complemental strand, 10265224 - 10265140
Alignment:
Q  94 ggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtggcttgt 178  Q
    |||||||| | || ||||||||||| ||| || |||||| | | |||||||||||| || || || |||||||| ||||||||||    
T  10265224 ggtggcttctcgaatggaggcttgtgaactgggggcttctcaattggtggcttgtatacaggtggtttctcaaccggtggcttgt 10265140  T

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