View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4807-Insertion-1 (Length: 849)
Name: NF4807-Insertion-1
Description: NF4807
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4807-Insertion-1 |
 | |
|
| [»] chr3 (33 HSPs) |
| |
|
Alignment Details
Target: chr3 (Bit Score: 496; Significance: 0; HSPs: 33)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 496; E-Value: 0
Query Start/End: Original strand, 12 - 849
Target Start/End: Complemental strand, 24840633 - 24839790
Alignment:
| Q |
12 |
tttcatgatttaaccacctagttacagtaaacaaacctttagaactgtccattttcttaaacctattgcaaattccatccatgaacttaacctcaatgag |
111 |
Q |
| |
|
||||||||||| |||| | || |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||| |
|
|
| T |
24840633 |
tttcatgatttcaccagttggtgacagtaaacaaacctttagaactgcccattttcttaaacctattgcaagttccatccatgaacttaacttcaatgag |
24840534 |
T |
|
| Q |
112 |
tttaaccttaactcatcatcatcttctttttcttcggtttctgaagcaaaggagtgtccctggaaaatcaatttcaatgggtggcactacccacaagaga |
211 |
Q |
| |
|
| |||||||||||||||||||| | || | |||||||||||||||||||| || | ||||||| ||||||||||||||||||||||||| |||| |
|
|
| T |
24840533 |
atcaaccttaactcatcatcatcatgttct------gtttctgaagcaaaggagtggcctttgaaaatccatttcaatgggtggcactacccacatgaga |
24840440 |
T |
|
| Q |
212 |
aatgggttaagtgggttgatgaacttaagcccaaatatgaatcagtatggaaaaaagctggaatcttcgaacctataatgagtactaagagctgcataat |
311 |
Q |
| |
|
||||| |||||||||||||||||||| ||| |||||||||||| || |||||||||||| | ||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
24840439 |
aatggattaagtgggttgatgaacttcagctcaaatatgaatcggtgtggaaaaaagcttgcatctttgaacctataatgagtactaagagctgcataat |
24840340 |
T |
|
| Q |
312 |
taaaaatcaagacttggtttgtgggattgttgagaaatggtgttgtgaaacaaacacctttgtgtttctatttggtgaagcaacaatcactatggaagat |
411 |
Q |
| |
|
|||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||| |
|
|
| T |
24840339 |
taaaaaccaagacttggtttgtggggttgttgagaaatggtgttgtgaaacaaacaccttcgtgtttctatttggtgaagcaacaatcactttggaggat |
24840240 |
T |
|
| Q |
412 |
gtcattgttttggagggtta---------------tcctgttttcacccaacttgaagatcaggagatgagagaggtcgaacagaagctcgtcaacattg |
496 |
Q |
| |
|
||||||||||||| ||| || |||||||||| |||| ||||||||||| |||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
24840239 |
gtcattgttttggggggctactctctctttggtcttcctgttttcgcccaccttgaagatcaagagatgagagaggtggaacagaagctcatcaacattg |
24840140 |
T |
|
| Q |
497 |
aaacaaaggagaggattatcaaaagtattttcaccttccacaacagtgtggatggatattttcatcgataaaggtagtgaaattgagcatgaagcatttc |
596 |
Q |
| |
|
||| | ||||||||| ||| |||| ||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
24840139 |
aaagccaagagaggatttcgaaaggtatgg-caccttctacatcagtgtggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttc |
24840041 |
T |
|
| Q |
597 |
ttgctacttggttctcaatttttgttttccctcataaatactctttgggtgaaaagttctttgtttcctattgtcattcatctagctagagggattccta |
696 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||| | | ||||| |||||||||||||| ||| |||||||||||||||||| ||||| |
|
|
| T |
24840040 |
ttgctacttggttgtcaatttttgttttccctcataaatactctctag-tgaaatgttctttgtttcctgttgctgttcatctagctagagggaatccta |
24839942 |
T |
|
| Q |
697 |
tttctttggcacctgctgttttggctagcttatataaggatttaaggttgtttaagaacacaattgttgattttcaaaaaatgtcctgataaatttcctt |
796 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| | |
|
|
| T |
24839941 |
tttctttggcacctgctgttttggctagcttatataacgatttaaggttgtttaagaacacaattgttga-tttcaaaaaatttcctgataaatttccct |
24839843 |
T |
|
| Q |
797 |
ttatgttggaagttaatgtacaatcacccttttacctggttcaagtttgggtt |
849 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24839842 |
ttatgctggacgttaatgtacaatcacccttttacctggttcaagtttgggtt |
24839790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 429; E-Value: 0
Query Start/End: Original strand, 8 - 849
Target Start/End: Original strand, 19943182 - 19944019
Alignment:
| Q |
8 |
aagatttcatgatttaaccacctagttacagtaaacaaacctttagaactgtccatttt-cttaaacctattgcaaattccatccatgaacttaacctca |
106 |
Q |
| |
|
||||||||||||||| |||| | || |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
19943182 |
aagatttcatgatttcaccagatggtcacagtaaacaaacctttagaactgcccatttttcttaaacctattgcaaattccattcatgaacttaacctca |
19943281 |
T |
|
| Q |
107 |
atgagtttaaccttaactcatcatcatcttctttttcttcggtttctgaagcaaaggagtgtccctggaaaatcaatttcaatgggtggcactacccaca |
206 |
Q |
| |
|
|| |||||||||||||| ||| ||| || |||||||||||||||||||| |||||||| |||||||||||||||| ||| || |
|
|
| T |
19943282 |
atcagtttaaccttaacc-----tcaa----------ttccattcatgaagcaaaggagtgtcccttcaaaatcaacttcaatgggtggcactcccctca |
19943366 |
T |
|
| Q |
207 |
agagaaatgggttaagtgggttgatgaacttaagcccaaatatgaatcagtatggaaaaaagctggaatcttcgaacctataatgagtactaagagctgc |
306 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||| |
|
|
| T |
19943367 |
agagaaatgggttaagtgggttgacgaacttaagcccaaatatgaatcagtatggaaaaaagctagaatctttgaacctataatgagtattaagagctgc |
19943466 |
T |
|
| Q |
307 |
ataattaaaaatcaagacttggtttgtgggattgttgagaaatggtgttgtgaaacaaacacctttgtgtttctatttggtgaagcaacaatcactatgg |
406 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
19943467 |
ataattaaaaatcaagacttggtttgtgggattgttgagaaatggtgttgtgaaacaaacacctttgtgtttctatttggtgaagcaacaatcactttgg |
19943566 |
T |
|
| Q |
407 |
aagatgtcattgttttggag---------------ggttatcctg-ttttcacccaacttgaagatcaggagatgagagaggtcgaacagaagctcgtca |
490 |
Q |
| |
|
|||||||||||||||||| | ||| |||||| |||||||||||||||||||||||||||| ||| |||| |||||||||||| ||| |
|
|
| T |
19943567 |
aagatgtcattgttttggggggatactctctctttggtcatcctgtttttcacccaacttgaagatcaggagattagaaaggtggaacagaagctcatca |
19943666 |
T |
|
| Q |
491 |
acattgaaacaaaggagaggattatcaaaagtattttcaccttccacaacagtgtggatggatattttcatcgataaaggtagtgaaattgagcatgaag |
590 |
Q |
| |
|
|||||||| | |||| |||| ||||||| | | ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
19943667 |
gcattgaaagccaagagatgatt-tcaaaaggtatggccccttccacatcagtgtggatggatattttcatcgataaaggtagtgaaattgaacatgaag |
19943765 |
T |
|
| Q |
591 |
catttcttgctacttggttctcaatttttgttttccctcataaatactctttgggtgaaaagttctttgtttcctattgtcattcatctagctagaggga |
690 |
Q |
| |
|
||||||||||||||||||| |||| |||||||| ||||||| |||| | | |||||||||||| |||||||||||| ||||||| |||||||||| |
|
|
| T |
19943766 |
catttcttgctacttggttgtcaa--tttgtttttcctcatagatacaatgt-ggtgaaaagttc--tgtttcctattgctgttcatcttgctagaggga |
19943860 |
T |
|
| Q |
691 |
ttcctatttctttggcacctgctgttttggctagcttatataaggatttaaggttgtttaagaacacaattgttgattttcaaaaaatgtcctgataaa- |
789 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||| ||| |||||||||||||||||| |
|
|
| T |
19943861 |
ttcctatggctttggcacctgctgttttggctagcttatataaggatttgagtttgtttaagaaacaaattgttga-tttgaaaaaatgtcctgataaat |
19943959 |
T |
|
| Q |
790 |
tttccttttatgttggaagttaatgtacaatcacccttttacctggttcaagtttgggtt |
849 |
Q |
| |
|
||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19943960 |
tttccctttatgttggacgttaatgtacaatcacccttttacctggttcaagtttgggtt |
19944019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 212 - 849
Target Start/End: Original strand, 19857723 - 19858374
Alignment:
| Q |
212 |
aatgggttaagtgggttgatgaacttaagcccaaatatgaatcagtatggaaaaaagctggaatcttcgaacctataatgagtactaagagctgcataat |
311 |
Q |
| |
|
||||||||||||||||||| ||||| | || ||||||||||| || ||||| ||||||| ||| || || |||| | ||||||||| || ||||||| |
|
|
| T |
19857723 |
aatgggttaagtgggttgaccaacttcaaccaaaatatgaatctgtgtggaagaaagctgaaatttttgatgctattaggagtactaaatgccgcataat |
19857822 |
T |
|
| Q |
312 |
taaaaatcaagacttggtttgtgggattgttgagaaatggtgttgtgaaaca-aacacctttgtgtttctatttggtgaagcaacaatcactatggaaga |
410 |
Q |
| |
|
||| ||| | ||||||||| |||| ||||||| |||||||||| ||| || || || || ||||||| ||||||||||||||||| ||||| || || |
|
|
| T |
19857823 |
gaaagatccaaacttggtttatggggttgttgacaaatggtgttctgagacccaatacattcgtgtttccctttggtgaagcaacaattactatagagga |
19857922 |
T |
|
| Q |
411 |
tgtcattgttttggagggtta---------------tcctgttttcacccaacttgaagatcaggagatgagagaggtcgaacagaagctcgtcaacatt |
495 |
Q |
| |
|
||| | ||||||| |||||| ||||||||||| | ||| ||||||||||| ||| ||| || |||||||||||| |||||||| |
|
|
| T |
19857923 |
tgttgtggttttggggggttactctctctttggtgatcctgttttcaaaccactcgaagatcaggaaatgcaagatgtggaacagaagctcatcaacatt |
19858022 |
T |
|
| Q |
496 |
gaaacaaaggagaggattatcaaaagtattttcaccttccacaacagtgtggatggatattttcatcgataaaggtagtgaaattgagcatgaagcattt |
595 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19858023 |
gaaacaaaggagaggattatcaaaagtattttcaccttccacaacagtgtggatggatattttcatcgataaaggtagtgaaattgagcatgaagcattt |
19858122 |
T |
|
| Q |
596 |
cttgctacttggttctcaatttttgttttccctcataaatactctttgggtgaaaagttctttgtttcctattgtcattcatctagctagagggattcct |
695 |
Q |
| |
|
|||||||||||||| |||||||||||||| ||| ||| ||||| || |||||||| |||||||||||||||| ||| ||| |||||||| | | || |
|
|
| T |
19858123 |
cttgctacttggttgtcaatttttgtttttcctaatagatact-ttaatgtgaaaagatctttgtttcctattgctattggtcttgctagaggaaatact |
19858221 |
T |
|
| Q |
696 |
atttctttggcacctgctgttttggctagcttatataaggatttaaggttgtttaagaacacaattgttgattttcaaaaaatgtcctgataaatttcct |
795 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||| ||||| || ||||||||||| ||||||||| || |||||||||| | |||||||||| |
|
|
| T |
19858222 |
atcgctttggcacctgctgttttggctagcttatataacgatttgagtttgtttaagaaacaaattgttga-attgaaaaaatgtcgttataaatttcca |
19858320 |
T |
|
| Q |
796 |
tttatgttggaagttaatgtacaatcacccttttacctggttcaagtttgggtt |
849 |
Q |
| |
|
|| ||||||| ||||||||| |||||||||||||| || |||||||||||||| |
|
|
| T |
19858321 |
ttggtgttggacgttaatgtataatcacccttttacttgcttcaagtttgggtt |
19858374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 183; E-Value: 2e-98
Query Start/End: Original strand, 214 - 783
Target Start/End: Original strand, 19853167 - 19853748
Alignment:
| Q |
214 |
tgggttaagtgggttgatgaacttaagcccaaatatgaatcagtatggaaaaaagctggaatcttcgaacctataatgagtactaagagctgcataatta |
313 |
Q |
| |
|
|||||||||||||||||| ||||| | | ||||||||||||| ||||||| |||| ||||||||| || |||| |||||||||||||||||||||| | |
|
|
| T |
19853167 |
tgggttaagtgggttgatcaacttcaactcaaatatgaatcactatggaagaaagttggaatctttgatgctattatgagtactaagagctgcataaaga |
19853266 |
T |
|
| Q |
314 |
aaaatcaagacttggtttgtgggattgttgagaaatggtgttgtgaaacaaacacctttgtgtttctatttggtgaagcaacaatcactatggaagatgt |
413 |
Q |
| |
|
|| ||||| ||||| | |||||| ||||||| |||||||||| ||| || || || |||||||| | |||||||||||||||||| ||| |||| ||||| |
|
|
| T |
19853267 |
aagatcaaaacttgttatgtggggttgttgacaaatggtgttctgagaccaatacatttgtgttcccatttggtgaagcaacaataactttggaggatgt |
19853366 |
T |
|
| Q |
414 |
cattgttttggagggtta---------------tcctgttttcacccaacttgaagatcaggagatgagagaggtcgaacagaagctcgtcaacattgaa |
498 |
Q |
| |
|
|| ||||||| |||||| |||| |||||| ||||||||||||| |||| |||| | || ||||||||| ||||||||||| |
|
|
| T |
19853367 |
tatggttttggggggttaccctatcattggtgatcctattttcaaatcacttgaagatcagagaatgaaagagttggagcagaagctcatcaacattgaa |
19853466 |
T |
|
| Q |
499 |
acaaaggagaggattatcaaaagtattttcaccttccacaacagtgtggatggatattttcatcgataaaggtagtgaaattgagcatgaagcatttctt |
598 |
Q |
| |
|
|||||||||| ||||||||| ||| ||||||||||| | ||||||||| | ||||| | | |||||||||||||||||| ||||||||||||||| |
|
|
| T |
19853467 |
gaaaaggagagggttatcaaaactatgc-caccttccacatctgtgtggatgacttttttctttggtaaaggtagtgaaattgaacatgaagcatttctt |
19853565 |
T |
|
| Q |
599 |
gctacttggttctcaatttttgttttccctcataaatactctttgggtgaaaagttctttgtttcctattgtcattcatctagctagagggattcctatt |
698 |
Q |
| |
|
||||||||||| || ||||||||||| ||||||| ||||| | | | ||||||| |||||||||||||||| |||| ||| |||||||| | | ||||| |
|
|
| T |
19853566 |
gctacttggttgtctatttttgtttttcctcatagatactttattg-tgaaaagatctttgtttcctattgctattcgtcttgctagaggtaatactatt |
19853664 |
T |
|
| Q |
699 |
tctttggcacctgctgttttggctagcttatataaggatttaaggttgtttaagaacacaattgttgattttcaaaaaatgtcct |
783 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||| || ||||||||||| | ||||||||| ||||||||||| |||| |
|
|
| T |
19853665 |
gctttggcacctgctgttttggctagcttatataacgatttgagtttgtttaagaaaaaaattgttga-tttcaaaaaatttcct |
19853748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 311 - 499
Target Start/End: Complemental strand, 20005351 - 20005163
Alignment:
| Q |
311 |
ttaaaaatcaagacttggtttgtgggattgttgagaaatggtgttgtgaaacaaacacctttgtgtttctatttggtgaagcaacaatcactatggaaga |
410 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
20005351 |
ttaaaaatcaagacttggtttgtgggattgttgagaaatggtgttgtgaaacaaacacctttgtgtttctatttggtgaagcaacaatcactttggaaga |
20005252 |
T |
|
| Q |
411 |
tgtcattgttttggagggttatcctgttttcacccaacttgaagatcaggagatgagagaggtcgaacagaagctcgtcaacattgaaa |
499 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20005251 |
tgtcattgttttggggggttatcctgttttcacccaacttgaagatcaggagatgagagaggtcgaacagaagctcgtcaacattgaaa |
20005163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 130 - 424
Target Start/End: Original strand, 26651604 - 26651898
Alignment:
| Q |
130 |
tcatcttctttttcttcggtttctgaagcaaaggagtgtccctggaaaatcaatttcaatgggtggcactacccacaagagaaatgggttaagtgggttg |
229 |
Q |
| |
|
|||||||||| || ||| |||| | || ||||||| || || | ||||||| |||||| |||||| |||||||| |||||||||||||||||||| |
|
|
| T |
26651604 |
tcatcttcttcttgttctgtttttaaaccaaaggaatggcctttgaaaatccgtttcaactggtggcgttacccacacacgaaatgggttaagtgggttg |
26651703 |
T |
|
| Q |
230 |
atgaacttaagcccaaatatgaatcagtatggaaaaaagctggaatcttcgaacctataatgagtactaagagctgcataattaaaaatcaagacttggt |
329 |
Q |
| |
|
|| ||||||||||||| ||||||||||| ||||||||||| || ||||| |||||||||||||||||||||||| || |||| ||||||||||||||||| |
|
|
| T |
26651704 |
atcaacttaagcccaagtatgaatcagtgtggaaaaaagccggcatctttgaacctataatgagtactaagagccgcgtaatgaaaaatcaagacttggt |
26651803 |
T |
|
| Q |
330 |
ttgtgggattgttgagaaatggtgttgtgaaacaaacacctttgtgtttctatttggtgaagcaacaatcactatggaagatgtcattgttttgg |
424 |
Q |
| |
|
|| ||||||| ||||||||||||| |||| ||||| |||||| |||| |||||||| |||||||||||| |||| |||||||||||||||| |
|
|
| T |
26651804 |
ttatgggatttctgagaaatggtgtagtgagacaaattgctttgtttttccttttggtgaggcaacaatcactttggaggatgtcattgttttgg |
26651898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 543 - 769
Target Start/End: Complemental strand, 20016321 - 20016096
Alignment:
| Q |
543 |
tgtggatggatattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactcttt |
642 |
Q |
| |
|
||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||| || |
|
|
| T |
20016321 |
tgtggatggatatgttcgctgataaaggtagtgaaattgaacatgaagcatttcttgctacttggctgtcaatttttgttttccctcataaatactc-tt |
20016223 |
T |
|
| Q |
643 |
gggtgaaaagttctttgtttcctattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaag |
742 |
Q |
| |
|
|||||||||| ||||||||| |||| |||||||| |||||| | | ||||||| |||||||||| ||||| ||||||||| ||||||| |||||||| |
|
|
| T |
20016222 |
ccgtgaaaagttgtttgtttccgattgctattcatcttgctagacgaaatcctattgctttggcaccagctgtcttggctagcatatataaagatttaag |
20016123 |
T |
|
| Q |
743 |
gttgtttaagaacacaattgttgattt |
769 |
Q |
| |
|
||||||||||| |||||||||||||| |
|
|
| T |
20016122 |
tttgtttaagaaaacaattgttgattt |
20016096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 545 - 754
Target Start/End: Original strand, 19956084 - 19956292
Alignment:
| Q |
545 |
tggatggatattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttgg |
644 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||| || || |
|
|
| T |
19956084 |
tggatggatattttcattgataaaggtagtgaaattgaacatgaagcttttcttgctacttggttgtcaatttttgttttccctcataaatattc-ttcc |
19956182 |
T |
|
| Q |
645 |
gtgaaaagttctttgtttcctattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaaggt |
744 |
Q |
| |
|
|||||||||| ||||||||||||||| ||||||| |||||||| | ||||||| |||||||||| |||||||| |||||| ||||||||||||||| | |
|
|
| T |
19956183 |
gtgaaaagttatttgtttcctattgttgttcatcttgctagaggaaatcctattgctttggcaccagctgttttagctagcatatataaggatttaactt |
19956282 |
T |
|
| Q |
745 |
tgtttaagaa |
754 |
Q |
| |
|
|||| ||||| |
|
|
| T |
19956283 |
tgttaaagaa |
19956292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 545 - 769
Target Start/End: Complemental strand, 20036721 - 20036498
Alignment:
| Q |
545 |
tggatggatattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttgg |
644 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||| ||||||||| ||| ||| | |
|
|
| T |
20036721 |
tggatggatattttcattgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactattt-g |
20036623 |
T |
|
| Q |
645 |
gtgaaaagttctttgtttcctattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaaggt |
744 |
Q |
| |
|
||||||||||||||||||||||||| | |||| |||||||| | || |||| |||| |||||||||||||| ||||| ||||||||||||||| | |
|
|
| T |
20036622 |
gtgaaaagttctttgtttcctattgctgtatatcttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaactt |
20036523 |
T |
|
| Q |
745 |
tgtttaagaacacaattgttgattt |
769 |
Q |
| |
|
|||||||||| |||||||||||||| |
|
|
| T |
20036522 |
tgtttaagaaaacaattgttgattt |
20036498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 545 - 760
Target Start/End: Original strand, 19848990 - 19849204
Alignment:
| Q |
545 |
tggatggatattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttgg |
644 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||| ||||||||| ||| ||| | |
|
|
| T |
19848990 |
tggatggatattttcattgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactattt-g |
19849088 |
T |
|
| Q |
645 |
gtgaaaagttctttgtttcctattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaaggt |
744 |
Q |
| |
|
||||||||||||||||||||||||| | |||| |||||||| | || |||| |||| |||||||||||||| ||||| ||||||||||||||| | |
|
|
| T |
19849089 |
gtgaaaagttctttgtttcctattgctgtatatcttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaactt |
19849188 |
T |
|
| Q |
745 |
tgtttaagaacacaat |
760 |
Q |
| |
|
|||||||||| ||||| |
|
|
| T |
19849189 |
tgtttaagaaaacaat |
19849204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 552 - 769
Target Start/End: Original strand, 19812287 - 19812500
Alignment:
| Q |
552 |
atattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttgggtgaaaa |
651 |
Q |
| |
|
|||||||| | | |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||| || |||||||| |
|
|
| T |
19812287 |
atattttcgttggtaaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcaatttttgtttttcctcataaata----tttggtgaaaa |
19812382 |
T |
|
| Q |
652 |
gttctttgtttcctattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaaggttgtttaa |
751 |
Q |
| |
|
||||||||||| || | |||| ||| ||||||||| ||||||| |||||||||| ||||| ||||||||| ||||||| |||||||| |||||||| |
|
|
| T |
19812383 |
agtctttgtttccgatcgctattcttcttgctagagggtatcctattgctttggcaccagctgtcttggctagcatatataaagatttaagtttgtttaa |
19812482 |
T |
|
| Q |
752 |
gaacacaattgttgattt |
769 |
Q |
| |
|
||| |||||||||||||| |
|
|
| T |
19812483 |
gaaaacaattgttgattt |
19812500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 545 - 778
Target Start/End: Original strand, 26647004 - 26647233
Alignment:
| Q |
545 |
tggatggatattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttgg |
644 |
Q |
| |
|
||||| |||| |||||| |||||||||||||||||||| ||||||||||| ||| |||||||||| ||| ||| |||||| |||||| | | || | |
|
|
| T |
26647004 |
tggatcgatagtttcatggataaaggtagtgaaattgaacatgaagcattcctttctacttggttgtcagtttatgtttttcctcatctaaa----tttg |
26647099 |
T |
|
| Q |
645 |
gtgaaaagttctttgtttcctattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaaggt |
744 |
Q |
| |
|
|||||||||| |||||||||||||| ||||||| |||||||||| ||| ||| |||||||||| |||||||| ||||||||||||||||||||||| | |
|
|
| T |
26647100 |
gtgaaaagttgtttgtttcctattgctgttcatcttgctagagggaatccaattgctttggcaccggctgttttagctagcttatataaggatttaagtt |
26647199 |
T |
|
| Q |
745 |
tgtttaagaacacaattgttgattttcaaaaaat |
778 |
Q |
| |
|
|||||||||| ||| |||||||||| ||||||| |
|
|
| T |
26647200 |
tgtttaagaaaacacttgttgatttgaaaaaaat |
26647233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 158 - 435
Target Start/End: Original strand, 19818156 - 19818433
Alignment:
| Q |
158 |
caaaggagtgtccctggaaaatcaatttcaatgggtggcactacccacaagagaaatgggttaagtgggttgatgaacttaagcccaaatatgaatcagt |
257 |
Q |
| |
|
|||| |||||||| | |||||| |||||||||| |||| | | | ||||||||||||| ||| ||||||||||||||||| || || |||||||| || |
|
|
| T |
19818156 |
caaatgagtgtcctttgaaaatacatttcaatggatggcgccaacaacaagagaaatggtttagttgggttgatgaacttaaaccaaagtatgaatctgt |
19818255 |
T |
|
| Q |
258 |
atggaaaaaagctggaatcttcgaacctataatgagtactaagagctgcataattaaaaatcaagacttggtttgtgggattgttgagaaatggtgttgt |
357 |
Q |
| |
|
||||| |||||| ||||||| || |||| ||||||||||| ||| ||| |||||||||| ||||| | | |||| |||||||||||||||||||| |
|
|
| T |
19818256 |
gtggaagaaagctagaatctttgatgctattatgagtactaaatgctacattcataaaaatcaaaacttgctatttggggttgttgagaaatggtgttgt |
19818355 |
T |
|
| Q |
358 |
gaaacaaacacctttgtgtttctatttggtgaagcaacaatcactatggaagatgtcattgttttggagggttatcct |
435 |
Q |
| |
|
|| || ||||||||||| |||| ||||||||| ||||| |||||| |||| |||||||| ||||||| |||||||||| |
|
|
| T |
19818356 |
gagactaacacctttgtttttccatttggtgaggcaactatcactttggaggatgtcatagttttggggggttatcct |
19818433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 545 - 767
Target Start/End: Original strand, 20046123 - 20046341
Alignment:
| Q |
545 |
tggatggatattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttgg |
644 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||| || ||||| || ||| |||||||||| |||||||||||||| ||||||||| | | | |
|
|
| T |
20046123 |
tggatggatatgttcatcgataaaggtagtgaaattgaacacgaagccttccttactacttggttgtcaatttttgtttttcctcataaaaa----tatg |
20046218 |
T |
|
| Q |
645 |
gtgaaaagttctttgtttcctattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaaggt |
744 |
Q |
| |
|
||||||| || ||||||| |||||| ||| |||| |||||||| | ||| ||| ||||||||||||||||||||| |||| |||||||||||||||| | |
|
|
| T |
20046219 |
gtgaaaaattgtttgttttctattgctattaatcttgctagaggaaatccaattgctttggcacctgctgttttgggtagcatatataaggatttaagtt |
20046318 |
T |
|
| Q |
745 |
tgtttaagaacacaattgttgat |
767 |
Q |
| |
|
| ||||||||||||||| ||||| |
|
|
| T |
20046319 |
tatttaagaacacaattattgat |
20046341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 545 - 754
Target Start/End: Original strand, 19838393 - 19838601
Alignment:
| Q |
545 |
tggatggatattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttgg |
644 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||| |||||||| ||||| ||||||||||| |||||||||||||| ||| || || |||| ||| |
|
|
| T |
19838393 |
tggatggatattttcatcgataaaggtagcgaaattgaacatgaagcttttctagctacttggttgtcaatttttgtttttcctaatcaacactc-ttgc |
19838491 |
T |
|
| Q |
645 |
gtgaaaagttctttgtttcctattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaaggt |
744 |
Q |
| |
|
|||||||| | ||||||||| ||||| ||||||| |||||||| | | ||||| |||||||||| |||||||| |||||| ||||||| ||||||| | |
|
|
| T |
19838492 |
gtgaaaagctttttgtttccaattgttgttcatcttgctagaggaaattctattgctttggcaccagctgttttagctagcatatataatgatttaactt |
19838591 |
T |
|
| Q |
745 |
tgtttaagaa |
754 |
Q |
| |
|
|||| ||||| |
|
|
| T |
19838592 |
tgttaaagaa |
19838601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 112 - 437
Target Start/End: Original strand, 19955628 - 19955953
Alignment:
| Q |
112 |
tttaaccttaactcatcatcatcttctttttcttcggtttctgaagcaaaggagtgtccctggaaaatcaatttcaatgggtggcactacccacaagaga |
211 |
Q |
| |
|
||||| |||||| ||| ||||| |||| |||||| |||| |||| |||||||| ||| | ||||||||| |||| ||| |||| | | ||||| ||| |
|
|
| T |
19955628 |
tttaagcttaacccattttcatcatcttcttcttctgtttttgaaccaaaggagcttcctttgaaaatcaacttcactggctggcgcctcacacaaaaga |
19955727 |
T |
|
| Q |
212 |
aatgggttaagtgggttgatgaacttaagcccaaatatgaatcagtatggaaaaaagctggaatcttcgaacctataatgagtactaagagctgcataat |
311 |
Q |
| |
|
|||||||| |||||| || ||||||| | || |||||||| || |||| |||| ||||||||| || |||||||||||||||| ||| ||| |
|
|
| T |
19955728 |
aatgggtttcttgggttcataaacttaaacaaaagtatgaatctgtttggaggaaagttggaatctttgatgctataatgagtactaaatgctacattca |
19955827 |
T |
|
| Q |
312 |
taaaaatcaagacttggtttgtgggattgttgagaaatggtgttgtgaaacaaacacctttgtgtttctatttggtgaagcaacaatcactatggaagat |
411 |
Q |
| |
|
||||||| || ||||| | | ||| |||||||||||||||||||||| ||||| || |||||||||| ||||||||| |||||||||||| |||||||| |
|
|
| T |
19955828 |
taaaaataaaaacttgctatttggagttgttgagaaatggtgttgtgagacaaatacatttgtgtttccatttggtgaggcaacaatcactttggaagat |
19955927 |
T |
|
| Q |
412 |
gtcattgttttggagggttatcctgt |
437 |
Q |
| |
|
||||| ||||||| |||||| ||||| |
|
|
| T |
19955928 |
gtcatggttttggggggttaccctgt |
19955953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 545 - 769
Target Start/End: Original strand, 19818557 - 19818777
Alignment:
| Q |
545 |
tggatggatattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttgg |
644 |
Q |
| |
|
|||||||| ||||| || | |||||||| |||||||| |||||||| ||||||||||||||||| |||||||||||||| |||||||| | || | |
|
|
| T |
19818557 |
tggatggaaatttttattggtaaaggtaccgaaattgaacatgaagcttttcttgctacttggttatcaatttttgtttttcctcataagaa----tttg |
19818652 |
T |
|
| Q |
645 |
gtgaaaagttctttgtttcctattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaaggt |
744 |
Q |
| |
|
||||||| || | |||||||| ||| || |||| |||||||||| ||||||| |||||||||| ||||||||||||| | | ||||| |||||||| | |
|
|
| T |
19818653 |
gtgaaaaattatctgtttcctgttgctgttaatcttgctagagggaatcctattgctttggcaccggctgttttggctaacatttataaagatttaagtt |
19818752 |
T |
|
| Q |
745 |
tgtttaagaacacaattgttgattt |
769 |
Q |
| |
|
|||||||||| | ||| |||||||| |
|
|
| T |
19818753 |
tgtttaagaaaaaaatagttgattt |
19818777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 163 - 431
Target Start/End: Original strand, 19811884 - 19812152
Alignment:
| Q |
163 |
gagtgtccctggaaaatcaatttcaatgggtggcactacccacaagagaaatgggttaagtgggttgatgaacttaagcccaaatatgaatcagtatgga |
262 |
Q |
| |
|
|||||||| | ||||||| |||||| ||| |||| ||||||||||||| ||||||| ||||||||||| ||||| || || |||||||| | |||| |
|
|
| T |
19811884 |
gagtgtcctttgaaaatccatttcagtggatggcgtcacccacaagagaagtgggttagatgggttgatgagcttaaaccaaagtatgaatctttgtgga |
19811983 |
T |
|
| Q |
263 |
aaaaagctggaatcttcgaacctataatgagtactaagagctgcataattaaaaatcaagacttggtttgtgggattgttgagaaatggtgttgtgaaac |
362 |
Q |
| |
|
| |||||| ||||||| || |||| |||||||| ||| | |||| | ||||||| | | ||| | | |||| |||||||||||||||||||||| || |
|
|
| T |
19811984 |
agaaagctagaatctttgatgctattatgagtaccaagtgtcacatactcaaaaatctaaaattgctctttggggttgttgagaaatggtgttgtgagac |
19812083 |
T |
|
| Q |
363 |
aaacacctttgtgtttctatttggtgaagcaacaatcactatggaagatgtcattgttttggagggtta |
431 |
Q |
| |
|
||||||||||| |||| ||||||||||||||| |||||| |||| ||| | || ||||||| |||||| |
|
|
| T |
19812084 |
taacacctttgtttttccatttggtgaagcaactatcactttggaggatattatggttttggggggtta |
19812152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 211 - 431
Target Start/End: Original strand, 19989174 - 19989394
Alignment:
| Q |
211 |
aaatgggttaagtgggttgatgaacttaagcccaaatatgaatcagtatggaaaaaagctggaatcttcgaacctataatgagtactaagagctgcataa |
310 |
Q |
| |
|
||||||||| | ||||||||| ||||||| ||||||| ||||| || ||||| |||| ||| ||||| ||| |||| |||||||| ||| | ||||||| |
|
|
| T |
19989174 |
aaatgggtttattgggttgatcaacttaaacccaaatttgaatatgtgtggaagaaagttggcatctttgaagctattatgagtaccaagtgttgcataa |
19989273 |
T |
|
| Q |
311 |
ttaaaaatcaagacttggtttgtgggattgttgagaaatggtgttgtgaaacaaacacctttgtgtttctatttggtgaagcaacaatcactatggaaga |
410 |
Q |
| |
|
||| |||| ||||| | | |||| |||||||||||||||||||||| |||||||| ||||| |||| ||||||||| ||||| |||||| ||||||| |
|
|
| T |
19989274 |
agaaagatcataacttgctatttggggttgttgagaaatggtgttgtgagacaaacacatttgtttttccatttggtgaggcaactatcactttggaaga |
19989373 |
T |
|
| Q |
411 |
tgtcattgttttggagggtta |
431 |
Q |
| |
|
||| || ||||| | |||||| |
|
|
| T |
19989374 |
tgttatggttttagggggtta |
19989394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 548 - 765
Target Start/End: Original strand, 26653155 - 26653368
Alignment:
| Q |
548 |
atggatattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttgggtg |
647 |
Q |
| |
|
|||||||||||||| || |||||||||||||||| ||||| ||||| ||||| ||||||| |||||||||||||| ||||||| | | | ||| |
|
|
| T |
26653155 |
atggatattttcattgactaaggtagtgaaattgaacatgatgcattccttgcagcttggttgtcaatttttgtttttcctcatatagaatta----gtg |
26653250 |
T |
|
| Q |
648 |
aaaagttctttgtttcctattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaaggttgt |
747 |
Q |
| |
|
||||||||||||||| |||||| ||||||| |||||||| | ||||||| |||||||||| |||||||| ||||| |||||||||| || | |||| |
|
|
| T |
26653251 |
aaaagttctttgttttctattgctgttcatcttgctagaggaaatcctattgctttggcaccagctgttttagctagtatatataaggacttgactttgt |
26653350 |
T |
|
| Q |
748 |
ttaagaacacaattgttg |
765 |
Q |
| |
|
||||||| |||||||||| |
|
|
| T |
26653351 |
ttaagaaaacaattgttg |
26653368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 545 - 769
Target Start/End: Original strand, 19951124 - 19951344
Alignment:
| Q |
545 |
tggatggatattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttgg |
644 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| |||||||| || |||| ||||||||| ||| |||||||||| ||| |||| | | | |
|
|
| T |
19951124 |
tggatggatattttcactgataaaggtagtgaaattgaacatgaagccttccttgttacttggttgtcactttttgtttttcct----aataataaattg |
19951219 |
T |
|
| Q |
645 |
gtgaaaagttctttgtttcctattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaaggt |
744 |
Q |
| |
|
|||| |||| || | | ||||||| |||||||| |||||||| | ||||||| ||||||| || |||||||| |||||| ||||||||||||||| | |
|
|
| T |
19951220 |
gtgaggagttattcgctacctattgctattcatcttgctagaggaaatcctattgctttggctccagctgttttagctagcatatataaggatttaactt |
19951319 |
T |
|
| Q |
745 |
tgtttaagaacacaattgttgattt |
769 |
Q |
| |
|
||||||| || ||||||||||||| |
|
|
| T |
19951320 |
tgtttaaaaaagcaattgttgattt |
19951344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 545 - 740
Target Start/End: Original strand, 19989522 - 19989716
Alignment:
| Q |
545 |
tggatggatattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttgg |
644 |
Q |
| |
|
||||||||| ||||||| |||||||||| |||| |||| |||||||||||||||||||||||||| |||||||||||| ||| ||||| | || | |
|
|
| T |
19989522 |
tggatggatgttttcattgataaaggtaatgaacttgaacatgaagcatttcttgctacttggttgtcaatttttgttcatccttataaa-agtcgtgtt |
19989620 |
T |
|
| Q |
645 |
gtgaaaagttctttgtttcctattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggattta |
740 |
Q |
| |
|
||||| |||||||| |||| | ||| |||||||| |||||||| | ||||||| | || |||||||| ||||||||||| || |||||||||||| |
|
|
| T |
19989621 |
gtgaatagttctttctttcgtgttgctattcatcttgctagaggaaatcctattgcattagcacctgcagttttggctagtttgtataaggattta |
19989716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 142 - 435
Target Start/End: Original strand, 26646593 - 26646886
Alignment:
| Q |
142 |
tcttcggtttctgaagcaaaggagtgtccctggaaaatcaatttcaatgggtggcactacccacaagagaaatgggttaagtgggttgatgaacttaagc |
241 |
Q |
| |
|
||||| |||| |||| |||||||||| || | ||||||||| |||| ||| |||| ||||| | |||||||||| ||||||||| ||||||| | |
|
|
| T |
26646593 |
tcttctgtttttgaaccaaaggagtggcctttgaaaatcaacttcactggttggcgtcgcccacgcgccaaatgggttagatgggttgatcaacttaaac |
26646692 |
T |
|
| Q |
242 |
ccaaatatgaatcagtatggaaaaaagctggaatcttcgaacctataatgagtactaagagctgcataattaaaaatcaagacttggtttgtgggattgt |
341 |
Q |
| |
|
|||||||||| |||| ||||| |||| ||| ||||| ||| | |||||| | || | | || ||||| ||||||||| |||||| | | |||| | || |
|
|
| T |
26646693 |
tcaaatatgaaacagtgtggaagaaagttggcatctttgaagcaataatgggcacaaggtgccgcatacataaaaatcatgacttgctatatggggtagt |
26646792 |
T |
|
| Q |
342 |
tgagaaatggtgttgtgaaacaaacacctttgtgtttctatttggtgaagcaacaatcactatggaagatgtcattgttttggagggttatcct |
435 |
Q |
| |
|
|||||||||||||||||| ||||| ||||||||| || |||||||||||||| || ||| |||| ||| |||| ||||||| |||||||||| |
|
|
| T |
26646793 |
tgagaaatggtgttgtgagacaaatacctttgtgattgcctttggtgaagcaactattactttggaggatatcatggttttggggggttatcct |
26646886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 182 - 437
Target Start/End: Original strand, 19838007 - 19838262
Alignment:
| Q |
182 |
atttcaatgggtggcactacccacaagagaaatgggttaagtgggttgatgaacttaagcccaaatatgaatcagtatggaaaaaagctggaatcttcga |
281 |
Q |
| |
|
||||| |||| |||||||| | ||| | ||||||||| ||||||||| | ||||| || || |||||||| || |||| |||| ||||||||| || |
|
|
| T |
19838007 |
atttctatggctggcactatcaccaacacaaatgggtttgttgggttgataagcttaaaccaaagtatgaatctgtttggaggaaagttggaatctttga |
19838106 |
T |
|
| Q |
282 |
acctataatgagtactaagagctgcataattaaaaatcaagacttggtttgtgggattgttgagaaatggtgttgtgaaacaaacacctttgtgtttcta |
381 |
Q |
| |
|
|||||||||||||||| ||| ||| ||||||| || ||||| | | || |||||||||||||||| ||||| || || || |||||||||| | |
|
|
| T |
19838107 |
tgctataatgagtactaaatgctacattcataaaaataaaaacttgttatttgaagttgttgagaaatggtgctgtgagaccaatacatttgtgtttcca |
19838206 |
T |
|
| Q |
382 |
tttggtgaagcaacaatcactatggaagatgtcattgttttggagggttatcctgt |
437 |
Q |
| |
|
|||||||| |||||||||||| ||||||||||||| ||||||| |||||| ||||| |
|
|
| T |
19838207 |
tttggtgaggcaacaatcactttggaagatgtcatggttttggggggttaccctgt |
19838262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 611 - 794
Target Start/End: Original strand, 19971677 - 19971858
Alignment:
| Q |
611 |
tcaatttttgttttccctcataaatactctttgggtgaaaagttctttgtttcctattgtcattcatctagctagagggattcctatttctttggcacct |
710 |
Q |
| |
|
|||||||||||||| |||||| ||||| | | | |||||||||||||||||||||||| |||||| | | |||||| | | ||||| |||||||||| |
|
|
| T |
19971677 |
tcaatttttgttttttctcatagatactttatag-tgaaaagttctttgtttcctattgctattcatttggttagaggcaatactattgctttggcacca |
19971775 |
T |
|
| Q |
711 |
gctgttttggctagcttatataaggatttaaggttgtttaagaacacaattgttgattttcaaaaaatgtcctgataaatttcc |
794 |
Q |
| |
|
||||||||||||||||||||||||||| || |||||||||| ||||||||| ||| ||||||| ||||||||||||||| |
|
|
| T |
19971776 |
actgttttggctagcttatataaggattgaactctgtttaagaaacaaattgttga-tttgaaaaaatatcctgataaatttcc |
19971858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 247 - 438
Target Start/End: Original strand, 19950812 - 19951003
Alignment:
| Q |
247 |
tatgaatcagtatggaaaaaagctggaatcttcgaacctataatgagtactaagagctgcataattaaaaatcaagacttggtttgtgggattgttgaga |
346 |
Q |
| |
|
|||||||| || ||||| |||||||||||||| || |||| ||||||||||| ||| ||| ||||||||| ||||| ||| |||| ||||||||| |
|
|
| T |
19950812 |
tatgaatctgtgtggaagaaagctggaatctttgatgctattatgagtactaaaagcataatacataaaaatcataacttgctttttggggttgttgaga |
19950911 |
T |
|
| Q |
347 |
aatggtgttgtgaaacaaacacctttgtgtttctatttggtgaagcaacaatcactatggaagatgtcattgttttggagggttatcctgtt |
438 |
Q |
| |
|
|||||||| ||| || || || |||||||||| ||||||||| ||||| |||||| |||| ||||| || ||||||| |||||| |||||| |
|
|
| T |
19950912 |
aatggtgtactgagaccaatacatttgtgtttccatttggtgaggcaactatcactttggaggatgttatggttttggggggttaccctgtt |
19951003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 553 - 669
Target Start/End: Original strand, 30914651 - 30914763
Alignment:
| Q |
553 |
tattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttgggtgaaaag |
652 |
Q |
| |
|
||||||||| ||||||| |||||||||||| ||||||||||| ||| |||||||||| |||||||||||||||||||| ||| | || ||||||||| |
|
|
| T |
30914651 |
tattttcattgataaagttagtgaaattgaacatgaagcattccttactacttggttgtcaatttttgttttccctcacaaaga----tttggtgaaaag |
30914746 |
T |
|
| Q |
653 |
ttctttgtttcctattg |
669 |
Q |
| |
|
|| |||||||||||||| |
|
|
| T |
30914747 |
ttttttgtttcctattg |
30914763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 210 - 438
Target Start/End: Original strand, 19848638 - 19848866
Alignment:
| Q |
210 |
gaaatgggttaagtgggttgatgaacttaagcccaaatatgaatcagtatggaaaaaagctggaatcttcgaacctataatgagtactaagagctgcata |
309 |
Q |
| |
|
|||||||||| |||||| || ||||||| | || |||||||| || ||||| |||| ||||||||| || |||| ||| |||||| ||| | || |
|
|
| T |
19848638 |
gaaatgggtttcttgggttcataaacttaaacaaaactatgaatctgtgtggaagaaagttggaatctttgatgctattatggccactaagtgctactta |
19848737 |
T |
|
| Q |
310 |
attaaaaatcaagacttggtttgtgggattgttgagaaatggtgttgtgaaacaaacacctttgtgtttctatttggtgaagcaacaatcactatggaag |
409 |
Q |
| |
|
| |||||||||| ||||| | |||| | ||||||||||||||| | | ||||| |||||||||||| ||||||||||||||||||||| |||| | |
|
|
| T |
19848738 |
aataaaaatcaaaacttgctagttggggtagttgagaaatggtgtcctaatacaaatacctttgtgttttcctttggtgaagcaacaatcactttggagg |
19848837 |
T |
|
| Q |
410 |
atgtcattgttttggagggttatcctgtt |
438 |
Q |
| |
|
|| |||| ||| | | ||||||||||||| |
|
|
| T |
19848838 |
atatcatggttctagggggttatcctgtt |
19848866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 744 - 843
Target Start/End: Original strand, 26652015 - 26652116
Alignment:
| Q |
744 |
ttgtttaagaacacaattgttgattttcaaaaaatgtcctgataaatttccttttatgttggaagttaatg---tacaatcacccttttacctggttcaa |
840 |
Q |
| |
|
||||||||||| ||| |||||||||| ||||||||||||||||||||| | || ||||||| ||||||| ||||||||||||||||| |||||||| |
|
|
| T |
26652015 |
ttgtttaagaaaacacttgttgatttg-aaaaaatgtcctgataaattttccttgttgttggaggttaatgtactacaatcacccttttacttggttcaa |
26652113 |
T |
|
| Q |
841 |
gtt |
843 |
Q |
| |
|
||| |
|
|
| T |
26652114 |
gtt |
26652116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 182 - 437
Target Start/End: Complemental strand, 20016694 - 20016439
Alignment:
| Q |
182 |
atttcaatgggtggcactacccacaagagaaatgggttaagtgggttgatgaacttaagcccaaatatgaatcagtatggaaaaaagctggaatcttcga |
281 |
Q |
| |
|
|||||| |||||||| | |||||||||| ||||||||| ||||||||| | ||||| | || |||||||| || ||||| | | ||||||||| || |
|
|
| T |
20016694 |
atttcactgggtggcgccacccacaagacaaatgggtttgttgggttgatcagcttaaaacaaagtatgaatctgtgtggaagcaggttggaatctttga |
20016595 |
T |
|
| Q |
282 |
acctataatgagtactaagagctgcataattaaaaatcaagacttggtttgtgggattgttgagaaatggtgttgtgaaacaaacacctttgtgtttcta |
381 |
Q |
| |
|
|||| ||||| || ||| | ||||| | | ||||||| ||||| | | || | ||| ||||||||||||| | | ||||| || |||||||||| | |
|
|
| T |
20016594 |
tgctattatgagcaccaagtgtcgcatactgagaaatcaaaacttgctatatgaggttgcggagaaatggtgttctaagacaaatacatttgtgtttcca |
20016495 |
T |
|
| Q |
382 |
tttggtgaagcaacaatcactatggaagatgtcattgttttggagggttatcctgt |
437 |
Q |
| |
|
|||| |||||| ||||||||| |||| ||| | || ||||||| ||||| ||||| |
|
|
| T |
20016494 |
tttgctgaagctacaatcactttggaggatattatggttttgggtggttaccctgt |
20016439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 427 - 470
Target Start/End: Original strand, 26651916 - 26651959
Alignment:
| Q |
427 |
ggttatcctgttttcacccaacttgaagatcaggagatgagaga |
470 |
Q |
| |
|
|||||||||||||| ||||||||||| |||| |||||||||||| |
|
|
| T |
26651916 |
ggttatcctgtttttacccaacttgatgatccggagatgagaga |
26651959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 802 - 848
Target Start/End: Original strand, 26653407 - 26653453
Alignment:
| Q |
802 |
ttggaagttaatgtacaatcacccttttacctggttcaagtttgggt |
848 |
Q |
| |
|
|||||||||||| ||| ||||||||||||| |||||||| ||||||| |
|
|
| T |
26653407 |
ttggaagttaatctacgatcacccttttacttggttcaaatttgggt |
26653453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 89
Target Start/End: Original strand, 19837889 - 19837926
Alignment:
| Q |
52 |
agaactgtccattttcttaaacctattgcaaattccat |
89 |
Q |
| |
|
||||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
19837889 |
agaactgcccattttcttaaacctattgcaaactccat |
19837926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 117; Significance: 4e-59; HSPs: 7)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 544 - 784
Target Start/End: Complemental strand, 22689774 - 22689536
Alignment:
| Q |
544 |
gtggatggatattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttg |
643 |
Q |
| |
|
|||||||||| ||||||||||||| |||| |||| |||| |||||||||||||||||||||||||| |||||||||||||| ||||||||| | | | | |
|
|
| T |
22689774 |
gtggatggatgttttcatcgataatggtaatgaatttgaacatgaagcatttcttgctacttggttgtcaatttttgtttttcctcataaa-aatatgtc |
22689676 |
T |
|
| Q |
644 |
ggtgaaaagttctttgtttcctattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaagg |
743 |
Q |
| |
|
||| ||||||||||||||| ||||| |||||||| |||||||| | | ||||| |||||||||||||||||||||||||| ||||||||||||| || |
|
|
| T |
22689675 |
ggtcaaaagttctttgtttactatttctattcatctggctagaggcaatactattgctttggcacctgctgttttggctagcatatataaggatttgagt |
22689576 |
T |
|
| Q |
744 |
ttgtttaagaacacaattgttgattttcaaaaaatgtcctg |
784 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
22689575 |
ttgtttaagaaacaaattgttga-tttcaaaaaatgtcctg |
22689536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 565 - 705
Target Start/End: Complemental strand, 22685778 - 22685642
Alignment:
| Q |
565 |
taaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttgggtgaaaagttctttgtttcc |
664 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||| ||||||||| ||| |||||||| |||| ||||||| |
|
|
| T |
22685778 |
taaaggtagtgaaattgagcatgaagcatttcttgctgcttggttgtcactttttgtttttcctcataaa----attttggtgaaaacttctatgtttcc |
22685683 |
T |
|
| Q |
665 |
tattgtcattcatctagctagagggattcctatttctttgg |
705 |
Q |
| |
|
|||| |||||||| |||||||||| ||||||| |||||| |
|
|
| T |
22685682 |
gattgctattcatcttgctagagggaatcctattgctttgg |
22685642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 545 - 638
Target Start/End: Complemental strand, 22652206 - 22652113
Alignment:
| Q |
545 |
tggatggatattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatact |
638 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||| |||||||||||||| |||||| ||||| |
|
|
| T |
22652206 |
tggatggatattttcatcgataaaggtagtgaaattgaacatgaagcgttccttgctacttggttgtcaatttttgtttttgctcatagatact |
22652113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 645 - 769
Target Start/End: Complemental strand, 22651912 - 22651788
Alignment:
| Q |
645 |
gtgaaaagttctttgtttcctattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaaggt |
744 |
Q |
| |
|
|||||||||| |||||||||||||| ||||||| |||||||| | ||||||| |||| ||||| ||||||||||||||| | ||||||||||||| | |
|
|
| T |
22651912 |
gtgaaaagttgtttgtttcctattgctgttcatcttgctagaggaaatcctattgcttttgcaccagctgttttggctagcatgtataaggatttaactt |
22651813 |
T |
|
| Q |
745 |
tgtttaagaacacaattgttgattt |
769 |
Q |
| |
|
|||||||||| |||||||||||||| |
|
|
| T |
22651812 |
tgtttaagaaaacaattgttgattt |
22651788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 565 - 765
Target Start/End: Complemental strand, 11564232 - 11564033
Alignment:
| Q |
565 |
taaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttgggtgaaaagttctttgtttcc |
664 |
Q |
| |
|
||||| |||| ||||||| ||||||||||| || || | ||| | || ||||||||||| ||||||||| || ||| | ||||||||||||||||| |
|
|
| T |
11564232 |
taaagctagtaaaattgaacatgaagcattcatttctgcatggctttccatttttgtttttcctcataaaagcttgttga-tcaaaagttctttgtttcc |
11564134 |
T |
|
| Q |
665 |
tattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaaggttgtttaagaacacaattgtt |
764 |
Q |
| |
|
||||| ||||||| |||||||| | |||||| |||| ||||| | ||| ||||| |||||||||||||||| | ||||||||| | ||||||||| |
|
|
| T |
11564133 |
tattgctgttcatcttgctagaggaaaacctattgctttagcaccgtcggttctggcttgcttatataaggatttgcgtttgtttaaggagacaattgtt |
11564034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 333 - 438
Target Start/End: Complemental strand, 22652432 - 22652327
Alignment:
| Q |
333 |
tgggattgttgagaaatggtgttgtgaaacaaacacctttgtgtttctatttggtgaagcaacaatcactatggaagatgtcattgttttggagggttat |
432 |
Q |
| |
|
|||| |||||||||||||||| ||||| |||||| | |||||||||| ||||||||| ||||| ||||| | |||||||| || |||| |||||||| |
|
|
| T |
22652432 |
tggggttgttgagaaatggtgctgtgagacaaactcatttgtgtttccatttggtgaggcaactatcaccttagaagatgttatgattttagagggttac |
22652333 |
T |
|
| Q |
433 |
cctgtt |
438 |
Q |
| |
|
|||||| |
|
|
| T |
22652332 |
cctgtt |
22652327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 786 - 849
Target Start/End: Original strand, 11544312 - 11544375
Alignment:
| Q |
786 |
taaatttccttttatgttggaagttaatgtacaatcacccttttacctggttcaagtttgggtt |
849 |
Q |
| |
|
||||||||| || | |||||| ||| |||| ||||||||| ||||| ||||||||||||||||| |
|
|
| T |
11544312 |
taaatttccattgaagttggaggttgatgtgcaatcacccatttacttggttcaagtttgggtt |
11544375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 93; Significance: 8e-45; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 545 - 769
Target Start/End: Complemental strand, 26355045 - 26354822
Alignment:
| Q |
545 |
tggatggatattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttgg |
644 |
Q |
| |
|
||||||||| ||||||| ||||||||||||||| |||| ||||||||||| ||| | ||||||| |||||||||||||| ||| |||| | |||| |
|
|
| T |
26355045 |
tggatggatgttttcatggataaaggtagtgaagttgaacatgaagcattcattgttgcttggttatcaatttttgtttttcctagaaaatgcatgttgg |
26354946 |
T |
|
| Q |
645 |
gtgaaaagttctttgtttcctattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaaggt |
744 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |||||||| | | ||||| |||||||||| |||||||| |||||| |||||||||||||||| |
|
|
| T |
26354945 |
-tgaaaagttctttgtttcctattgctattcatcttgctagaggaaattctattgctttggcaccggctgttttagctagcatatataaggatttaagcg |
26354847 |
T |
|
| Q |
745 |
tgtttaagaacacaattgttgattt |
769 |
Q |
| |
|
|||||||||| || ||||||||||| |
|
|
| T |
26354846 |
tgtttaagaaaaccattgttgattt |
26354822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 545 - 769
Target Start/End: Original strand, 9815037 - 9815257
Alignment:
| Q |
545 |
tggatggatattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttgg |
644 |
Q |
| |
|
||||||||| |||||||||| |||||||||||||||||||||||||| || ||||||| ||||| ||||| |||||||| ||||||||| |||||| |
|
|
| T |
9815037 |
tggatggattttttcatcgacaaaggtagtgaaattgagcatgaagcgttcattgctacgtggttgtcaatctttgttttaactcataaat---ctttgg |
9815133 |
T |
|
| Q |
645 |
gtgaaaagttctttgtttcctattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaaggt |
744 |
Q |
| |
|
||||||||||||||||| |||||| |||||||| |||||||| | | ||||| |||||||||| |||||||| ||||| | ||||| |||||||| | |
|
|
| T |
9815134 |
-tgaaaagttctttgttttctattgctattcatcttgctagaggaaattctattgctttggcaccagctgttttagctagtatttataacgatttaagtt |
9815232 |
T |
|
| Q |
745 |
tgtttaagaacacaattgttgattt |
769 |
Q |
| |
|
|||||||||| ||||| ||| |||| |
|
|
| T |
9815233 |
tgtttaagaaaacaatagttaattt |
9815257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 182 - 437
Target Start/End: Original strand, 9814660 - 9814915
Alignment:
| Q |
182 |
atttcaatgggtggcactacccacaagagaaatgggttaagtgggttgatgaacttaagcccaaatatgaatcagtatggaaaaaagctggaatcttcga |
281 |
Q |
| |
|
|||||||||| |||| |||||||||||||||||| || | ||||||||| ||||||| || || |||||||| | ||||| |||| || ||||| || |
|
|
| T |
9814660 |
atttcaatggatggcgttacccacaagagaaatggatttattgggttgatcaacttaaaccaaagtatgaatctttgtggaagaaagtaggtatctttga |
9814759 |
T |
|
| Q |
282 |
acctataatgagtactaagagctgcataattaaaaatcaagacttggtttgtgggattgttgagaaatggtgttgtgaaacaaacacctttgtgtttcta |
381 |
Q |
| |
|
||||||||||||| ||| || ||||||| ||| ||||| ||||| | | |||| |||||||||||||||||||| | || || || |||||||||| |
|
|
| T |
9814760 |
tgctataatgagtaccaagtgccgcataatgaaagatcaaaacttgctatatggggttgttgagaaatggtgttgtaagacgaatacatttgtgtttccg |
9814859 |
T |
|
| Q |
382 |
tttggtgaagcaacaatcactatggaagatgtcattgttttggagggttatcctgt |
437 |
Q |
| |
|
|||||||| || || || | | |||| ||||| || ||||||| |||||||||||| |
|
|
| T |
9814860 |
tttggtgaggcgacgattagtttggaggatgttatggttttggggggttatcctgt |
9814915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 223 - 389
Target Start/End: Complemental strand, 26355381 - 26355215
Alignment:
| Q |
223 |
tgggttgatgaacttaagcccaaatatgaatcagtatggaaaaaagctggaatcttcgaacctataatgagtactaagagctgcataattaaaaatcaag |
322 |
Q |
| |
|
||||||||| ||||||||| |||||||||| | || ||||| |||||||| || || || ||||||||||||| || || ||||| | ||||||||| |
|
|
| T |
26355381 |
tgggttgatcaacttaagctcaaatatgaaccggtttggaagaaagctgggatttttgatgctataatgagtaccaaatgccgcatactgaaaaatcaaa |
26355282 |
T |
|
| Q |
323 |
acttggtttgtgggattgttgagaaatggtgttgtgaaacaaacacctttgtgtttctatttggtga |
389 |
Q |
| |
|
||||| ||| ||| |||| ||||||||||||||||| || || || |||||||||| |||||||| |
|
|
| T |
26355281 |
acttgctttacggggttgtggagaaatggtgttgtgagactaatacatttgtgtttccgtttggtga |
26355215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 285 - 434
Target Start/End: Complemental strand, 38435523 - 38435375
Alignment:
| Q |
285 |
tataatgagtactaagagctgcataattaaaaatcaagacttggtttgtgggattgttgagaaatggtgttgtgaaacaaacacctttgtgtttctattt |
384 |
Q |
| |
|
||||||||||||||| ||| |||| ||||||||| ||||| | | | || |||||||||||||||||||| | || || || |||||||||| | || |
|
|
| T |
38435523 |
tataatgagtactaaatgctacatacataaaaatcataacttgttatttagggttgttgagaaatggtgttgtaagaccaatacatttgtgtttccactt |
38435424 |
T |
|
| Q |
385 |
ggtgaagcaacaatcactatggaagatgtcattgttttggagggttatcc |
434 |
Q |
| |
|
|||| ||||||||||||| | |||||| |||| ||||||| ||||||||| |
|
|
| T |
38435423 |
ggtgtagcaacaatcacttttgaagatatcatggttttgg-gggttatcc |
38435375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 92; Significance: 3e-44; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 536 - 765
Target Start/End: Original strand, 1717205 - 1717430
Alignment:
| Q |
536 |
acaacagtgtggatggatattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaat |
635 |
Q |
| |
|
|||||| | ||||||||| |||| | |||||||||||||||||||| |||||||||||||||||||||||||| || ||| |||||| ||||||||| |
|
|
| T |
1717205 |
acaacattatggatggatgtttttgttgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcggtttatgtttttcctcataaa- |
1717303 |
T |
|
| Q |
636 |
actctttgggtgaaaagttctttgtttcctattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagcttatataagg |
735 |
Q |
| |
|
|||| |||||||| |||||||||||||||| ||||||| |||||||| | ||||||| |||||||||| |||||||| |||||| ||||||||| |
|
|
| T |
1717304 |
--gcttt-ggtgaaaaaatctttgtttcctattgctgttcatcttgctagaggaaatcctattgctttggcaccggctgttttagctagcatatataagg |
1717400 |
T |
|
| Q |
736 |
atttaaggttgtttaagaacacaattgttg |
765 |
Q |
| |
|
|||||| ||||||||||| ||||| |||| |
|
|
| T |
1717401 |
atttaactttgtttaagaaaacaatagttg |
1717430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 211 - 407
Target Start/End: Original strand, 1716863 - 1717062
Alignment:
| Q |
211 |
aaatgggttaagtgggttgatgaacttaagcccaaatatgaatcagtatggaaaaaagctggaatcttcgaacctataatgagtactaagagctgc---a |
307 |
Q |
| |
|
||||||| ||||||||||||||||||||| | |||| ||||| |||| ||||| |||| ||| ||||| ||| |||||||||| || ||| | | | |
|
|
| T |
1716863 |
aaatgggataagtgggttgatgaacttaaactcaaacatgaaacagtgtggaagaaagttggcatctttgaagctataatgagcaccaagtgtcgtcgta |
1716962 |
T |
|
| Q |
308 |
taattaaaaatcaagacttggtttgtgggattgttgagaaatggtgttgtgaaacaaacacctttgtgtttctatttggtgaagcaacaatcactatgga |
407 |
Q |
| |
|
||| ||||||||| ||||| | | |||||||||||| |||||||||||||| ||||| || |||||||||| ||||||||||| ||||||||| |||| |
|
|
| T |
1716963 |
taaagaaaaatcaaaacttgttatatgggattgttgaaaaatggtgttgtgagacaaatacatttgtgtttccttttggtgaagccacaatcactttgga |
1717062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 284 - 428
Target Start/End: Complemental strand, 34408481 - 34408336
Alignment:
| Q |
284 |
ctataatgagtactaagagctgcataattaaaaatcaagacttggtttgtgggattgttgagaaatggtgttgtgaaacaaacacctttgtgtttctatt |
383 |
Q |
| |
|
|||||||||||||| |||| ||||||| |||||||||||||| | || | ||||||| ||| ||| ||||||||| ||||| |||||||||||| | || |
|
|
| T |
34408481 |
ctataatgagtacttagagttgcataaagaaaaatcaagacttcgattataggattgtcgagtaatagtgttgtgagacaaatacctttgtgtttttctt |
34408382 |
T |
|
| Q |
384 |
t-ggtgaagcaacaatcactatggaagatgtcattgttttggaggg |
428 |
Q |
| |
|
| ||||| | |||||||||| |||| ||||| || ||||||||||| |
|
|
| T |
34408381 |
taggtgatggaacaatcactttggatgatgtgatggttttggaggg |
34408336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 50; Significance: 4e-19; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 545 - 634
Target Start/End: Complemental strand, 6397856 - 6397767
Alignment:
| Q |
545 |
tggatggatattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaa |
634 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||| |||||||| || |||||||| ||||| ||||||| || ||| |||| |||| |
|
|
| T |
6397856 |
tggatggatatgttcatcgataaaggtagtgaaattgaacatgaagccttccttgctacctggttgtcaatttgtgcttttcctcctaaa |
6397767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 545 - 754
Target Start/End: Original strand, 6398261 - 6398468
Alignment:
| Q |
545 |
tggatggatattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcataaatactctttgg |
644 |
Q |
| |
|
||||||||||| || ||| ||||||||||||||||||| |||||||| || ||||||| |||||| | |||||||||||| ||| |||| || | | |
|
|
| T |
6398261 |
tggatggatatgtttatctataaaggtagtgaaattgaacatgaagccttccttgctaattggttgttaatttttgtttttcctagtaaa-acaat---g |
6398356 |
T |
|
| Q |
645 |
gtgaaaagttctttgtttcctattgtcattcatctagctagagggattcctatttctttggcacctgctgttttggctagc--ttatataaggatttaag |
742 |
Q |
| |
|
|||||||||| ||||||| |||||| || |||| |||||||| | ||| || ||||||||| |||||||| |||||| ||||||||||||||| |
|
|
| T |
6398357 |
gtgaaaagttgtttgttttctattgctgttaatctcgctagaggaaatccaatcggtttggcaccagctgttttagctagcatatatataaggatttaac |
6398456 |
T |
|
| Q |
743 |
gttgtttaagaa |
754 |
Q |
| |
|
|| |||||||| |
|
|
| T |
6398457 |
tttatttaagaa |
6398468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 700 - 769
Target Start/End: Complemental strand, 6397703 - 6397634
Alignment:
| Q |
700 |
ctttggcacctgctgttttggctagcttatataaggatttaaggttgtttaagaacacaattgttgattt |
769 |
Q |
| |
|
|||||||||| |||||||||||| | |||||||||||||| || |||||||| |||||| ||||||| |
|
|
| T |
6397703 |
ctttggcaccatctgttttggctatcatatataaggatttatctttatttaagaaaacaattattgattt |
6397634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 36; Significance: 0.00000000008; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 577 - 767
Target Start/End: Original strand, 12497241 - 12497427
Alignment:
| Q |
577 |
aattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcata-aatactctttgggtgaaaagttctttgtttcctattgtcattc |
675 |
Q |
| |
|
|||||| |||||||| || |||||||| ||||| |||||||||||||| ||||||| || | | ||||| ||||| ||||||| |||||| ||| |
|
|
| T |
12497241 |
aattgaacatgaagccttccttgctacctggttgtcaatttttgtttttcctcatagaaaaat-----ggtgataagttatttgttttctattgctatta |
12497335 |
T |
|
| Q |
676 |
atctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaaggttgtttaagaacacaattgttgat |
767 |
Q |
| |
|
|||| |||||| | | || ||| ||||| | || ||||||||||||||| || |||| ||||||| || |||||||| |||||| ||||| |
|
|
| T |
12497336 |
atcttgctagaagaaatcaaattactttgccgccagctgttttggctagcataaataacgatttaactttatttaagaaaacaattattgat |
12497427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 577 - 767
Target Start/End: Original strand, 12521106 - 12521292
Alignment:
| Q |
577 |
aattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcata-aatactctttgggtgaaaagttctttgtttcctattgtcattc |
675 |
Q |
| |
|
|||||| |||||||| || |||||||| ||||| |||||||||||||| ||||||| || | | ||||| ||||| ||||||| |||||| ||| |
|
|
| T |
12521106 |
aattgaacatgaagccttccttgctacctggttgtcaatttttgtttttcctcatagaaaaat-----ggtgataagttatttgttttctattgctatta |
12521200 |
T |
|
| Q |
676 |
atctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaaggttgtttaagaacacaattgttgat |
767 |
Q |
| |
|
|||| |||||| | | || ||| ||||| | || ||||||||||||||| || |||| ||||||| || |||||||| |||||| ||||| |
|
|
| T |
12521201 |
atcttgctagaagaaatcaaattactttgccgccagctgttttggctagcataaataacgatttaactttatttaagaaaacaattattgat |
12521292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 577 - 767
Target Start/End: Original strand, 12581424 - 12581610
Alignment:
| Q |
577 |
aattgagcatgaagcatttcttgctacttggttctcaatttttgttttccctcata-aatactctttgggtgaaaagttctttgtttcctattgtcattc |
675 |
Q |
| |
|
|||||| |||||||| || |||||||||||||| |||||||||||||| |||| || || | | ||||||||||| ||||||| |||||| ||| |
|
|
| T |
12581424 |
aattgaacatgaagccttccttgctacttggttgtcaatttttgtttttcctcgtagaaaaat-----ggtgaaaagttatttgttttctattgctatta |
12581518 |
T |
|
| Q |
676 |
atctagctagagggattcctatttctttggcacctgctgttttggctagcttatataaggatttaaggttgtttaagaacacaattgttgat |
767 |
Q |
| |
|
|||| |||||| | | || ||| ||||| | | |||||||||||||| || |||||||||||| || |||||||| |||||| ||||| |
|
|
| T |
12581519 |
atcttgctagaagaaatcgaattactttgccgcaaactgttttggctagcataaataaggatttaactttatttaagaaaacaattattgat |
12581610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 582
Target Start/End: Original strand, 12496285 - 12496322
Alignment:
| Q |
545 |
tggatggatattttcatcgataaaggtagtgaaattga |
582 |
Q |
| |
|
||||||||||| |||||||||||| ||||||||||||| |
|
|
| T |
12496285 |
tggatggatatgttcatcgataaatgtagtgaaattga |
12496322 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 582
Target Start/End: Original strand, 12520150 - 12520187
Alignment:
| Q |
545 |
tggatggatattttcatcgataaaggtagtgaaattga |
582 |
Q |
| |
|
||||||||||| |||||||||||| ||||||||||||| |
|
|
| T |
12520150 |
tggatggatatgttcatcgataaatgtagtgaaattga |
12520187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 582
Target Start/End: Original strand, 12580439 - 12580476
Alignment:
| Q |
545 |
tggatggatattttcatcgataaaggtagtgaaattga |
582 |
Q |
| |
|
||||||||||| |||||||||||| ||||||||||||| |
|
|
| T |
12580439 |
tggatggatatgttcatcgataaatgtagtgaaattga |
12580476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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