View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4807-Insertion-4 (Length: 386)
Name: NF4807-Insertion-4
Description: NF4807
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4807-Insertion-4 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 346; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 346; E-Value: 0
Query Start/End: Original strand, 13 - 386
Target Start/End: Complemental strand, 36167567 - 36167195
Alignment:
| Q |
13 |
gtacaatttcaaatcaaattaaactaaccaacattctatttagaggtttagttttcatacacggttattaaaagaaaattcactcattcagtagcacatt |
112 |
Q |
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| T |
36167567 |
gtacattttcaaatcaaattaaactaaccaacattctatttagag-tttagttttcatacacggttattaaaagaaaattcactcattcagtagaacatt |
36167469 |
T |
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| Q |
113 |
gcaatcgatcgtacgtatcaatttattattctttttaacagacagagtaaccaacttcttttcatttatagtatatgctacattatatgtaaataattta |
212 |
Q |
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| T |
36167468 |
gcaatcgatcgtacgtatcaatttattattctttttaacagacagagtaaccaacttcttttcatttatagtatatgctacattatatgtaaataattta |
36167369 |
T |
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| Q |
213 |
agtaaaactttggaggttggccataccaataacttgcaatgaattctaagaatagtaaattttagaatttataatcactcaaagtaaattatggataata |
312 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
36167368 |
agtaaaactttggaggttggccataccaataacttgcaatgaattctaagaatagtaaattttagaatttataatcactcaaagtaaattatggatagta |
36167269 |
T |
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| Q |
313 |
ttgtaaccgcttgactttatgtaaagaaggggttatctatgtttctatctcaattcatatttcatatatcataa |
386 |
Q |
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||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36167268 |
ttgtaaccgcttgactttatgtaaataaagggttatctatgtttctatctcaattcatatttcatatatcataa |
36167195 |
T |
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