View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4809-Insertion-19 (Length: 667)
Name: NF4809-Insertion-19
Description: NF4809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4809-Insertion-19 |
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Alignment Details
Target: chr2 (Bit Score: 466; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 466; E-Value: 0
Query Start/End: Original strand, 48 - 654
Target Start/End: Original strand, 12325111 - 12325690
Alignment:
| Q |
48 |
gttttgataattgatatgcttaaatttcccaaaacagaacaattcacatagaatcgtaatgatatttttatccatatagaatgtcattaagcatataaac |
147 |
Q |
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| T |
12325111 |
gttttgataattgatttgcttaaatttcccaaaacagaacaat-cacatagaatcgtaatgatatttttatccatatagcatattattaagcatataaac |
12325209 |
T |
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| Q |
148 |
aaaaatatttgtgacccttgtataatcaaaatcacaatgacaggcttaaaatttgtttttgtaaatttaagatgagcaagacttatctaatacatatcag |
247 |
Q |
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| T |
12325210 |
aaaaatatttgtgacccttgtataatcaaaatcacaatgacaggcttaaaatttgtttttgtaaatttaagatgagcaagacttatctaatacatatcag |
12325309 |
T |
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| Q |
248 |
tcctgcatactgtttgaccaaagtaatatatttgaaaatcatagattaagtggttatagacaaagttagaaactagcaagtacatatagattacaatcaa |
347 |
Q |
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| T |
12325310 |
tcctgcatattgtttgaccaaagtaatatatttgaaaatcatagatt---------------aagttagaaactagcaagtacatatagattacaatcaa |
12325394 |
T |
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| Q |
348 |
agcacagtagcaataagatatctgatatgaacctgatccaataataacatgttagtttcacacctgcatttgatttaaatagtatagtagactattctga |
447 |
Q |
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| T |
12325395 |
agcacagtagcaataagatatctgatatgaacctgatccaataataacatgttagtttcacacctgcatttgatttaaatagtatagtagactattctga |
12325494 |
T |
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| Q |
448 |
tttctgagaagaacttctcatttcctaaagaatgataccatgtcaatatgaagcaacattgatatagtaggctattctgaaccaacaaagctcttttgtg |
547 |
Q |
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| T |
12325495 |
tttctgagaagaacttctcatttcctaaagaatgataccatgtcaatatgaagcaac----------taggctattctgaaccaacaaagctcttttgtg |
12325584 |
T |
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| Q |
548 |
ctaagctgcaaatagcatagcctatgtttccaaaaacactttagcaaaaagcaggcatatcaagaacatgtgtttaaacaaaacataattagaaattaat |
647 |
Q |
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| T |
12325585 |
ctaagctgcaaatagcatatcctatgtttccaaaaatactttagc-aaaagcaggcatatcaagaacaagtgtttaaacaaagcataattagaaattaaa |
12325683 |
T |
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