View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4809-Insertion-21 (Length: 500)

Name: NF4809-Insertion-21
Description: NF4809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4809-Insertion-21
NF4809-Insertion-21
[»] chr7 (1 HSPs)
chr7 (8-500)||(41509020-41509525)


Alignment Details
Target: chr7 (Bit Score: 362; Significance: 0; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 362; E-Value: 0
Query Start/End: Original strand, 8 - 500
Target Start/End: Original strand, 41509020 - 41509525
Alignment:
Q  8 actattttatcaataactaatatttccatcaaaaa-------tgaccccgcggtcttt----aggtggaatattctctcgcaaacccattttttcagttg 96  Q
    |||||||||||||||||||||||||||||||||||       ||||||||||||||||    |||||||||||||| ||||||||||| |||||||||||    
T  41509020 actattttatcaataactaatatttccatcaaaaaagttaattgaccccgcggtctttctttaggtggaatattctttcgcaaacccactttttcagttg 41509119  T
Q  97 gcaaaaactctaatctaaaacattacctaaaagatctaagacaaatacactgactttgaatatattaagttaacacggtttaattaataccgtacataag 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    ||||||||||||    
T  41509120 gcaaaaactctaatctaaaacattacctaaaagatctaagacaaatacactgattttgaatatgttaagttaacacggtttaat----accgtacataag 41509215  T
Q  197 acacatgtggtggaagtggtcatgcaagaatttattcaggtaaacaagtgggcatgagtcgtttccattctgactctcctgccatactataattgaatct 296  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    |||||||||||||||||||||||||    
T  41509216 acacatgtggtggatgtggtcatgcaagaatttattcaggtaaacaagtgggcatgagtcgtttccattttctgactcctgccatactataattgaatct 41509315  T
Q  297 tcacgtcacttccttctcacttttttgtttgcgtcttagaagagaatttgtggtcatcattaaaagcatgctacgtgttattcacatgattctagaccta 396  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  41509316 tcacgtcacttccttctcacttttttgtttgcgtcttagaagagaatttgtggtcatcataaaaagcatgctacgtgtgattcacatgattctagaccta 41509415  T
Q  397 t-----atg-atatatccatgtattgcagtattgcataccatcactactttcctaatatgattcaatgttcattgcatatgctcttacatcaccattcat 490  Q
    |     ||| ||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  41509416 tactccatgcatatatccatgcattgtagtattgcataccatcactactttcctaacatgattcaatgttcattgcatatgctcttacatcaccattcat 41509515  T
Q  491 tagatataga 500  Q
    ||||||||||    
T  41509516 tagatataga 41509525  T

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