View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4809-Insertion-25 (Length: 215)
Name: NF4809-Insertion-25
Description: NF4809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4809-Insertion-25 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 139; Significance: 6e-73; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 14 - 215
Target Start/End: Original strand, 10265879 - 10266083
Alignment:
| Q |
14 |
acttagacacgtatttcaaaattatttatttaagaaagaatgcaatgaacatcaaagtcacannnnnnnnnnnn---aatagaaaaaataacataaatta |
110 |
Q |
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| T |
10265879 |
acttagacacgtatttcaaaattatttatttaagaaagaatgcaatgaacaacaaagttacatatcacattttttttaatagaaaaaataacataaatta |
10265978 |
T |
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| Q |
111 |
ttatccattaaatataaataacagttgttctacaaggaatccaacacatagccttctttctattctataaattgattcacccacctttccatgttcatac |
210 |
Q |
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| T |
10265979 |
ttatccattaaatataaataacagttgttctacaaggaatccaacacatagctttctttctattctataaattgagtcacccacctttccatgttcatac |
10266078 |
T |
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| Q |
211 |
tctta |
215 |
Q |
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||||| |
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| T |
10266079 |
tctta |
10266083 |
T |
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