View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4809-Insertion-5 (Length: 468)

Name: NF4809-Insertion-5
Description: NF4809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4809-Insertion-5
NF4809-Insertion-5
[»] chr7 (5 HSPs)
chr7 (220-382)||(48834128-48834290)
chr7 (8-193)||(48833923-48834108)
chr7 (382-430)||(23624510-23624558)
chr7 (382-430)||(24995851-24995899)
chr7 (382-430)||(40320411-40320459)
[»] chr6 (3 HSPs)
chr6 (378-430)||(28975335-28975387)
chr6 (382-430)||(34035045-34035093)
chr6 (390-430)||(24126719-24126759)
[»] chr3 (6 HSPs)
chr3 (383-430)||(45297549-45297596)
chr3 (381-430)||(49160985-49161034)
chr3 (382-430)||(17026883-17026931)
chr3 (390-430)||(31556217-31556257)
chr3 (390-430)||(38922750-38922790)
chr3 (382-430)||(45807042-45807090)
[»] chr4 (9 HSPs)
chr4 (381-430)||(41261891-41261940)
chr4 (380-417)||(20351325-20351362)
chr4 (382-430)||(231435-231483)
chr4 (382-430)||(22499097-22499145)
chr4 (382-430)||(23383309-23383357)
chr4 (390-430)||(30808628-30808668)
chr4 (382-430)||(39429938-39429986)
chr4 (390-430)||(47376859-47376899)
chr4 (382-430)||(52077101-52077149)
[»] chr1 (7 HSPs)
chr1 (390-468)||(574391-574469)
chr1 (383-430)||(30780985-30781032)
chr1 (382-430)||(42383719-42383767)
chr1 (383-430)||(38688642-38688689)
chr1 (381-430)||(34716422-34716471)
chr1 (390-430)||(42384155-42384195)
chr1 (390-430)||(43737979-43738019)
[»] chr5 (1 HSPs)
chr5 (383-430)||(12201377-12201424)
[»] chr2 (4 HSPs)
chr2 (380-430)||(6085702-6085752)
chr2 (381-430)||(11872078-11872127)
chr2 (390-430)||(37546565-37546605)
chr2 (390-430)||(37548005-37548045)
[»] chr8 (1 HSPs)
chr8 (381-430)||(42346106-42346155)
[»] scaffold0129 (1 HSPs)
scaffold0129 (383-430)||(43219-43266)
[»] scaffold0041 (1 HSPs)
scaffold0041 (390-430)||(27228-27268)


Alignment Details
Target: chr7 (Bit Score: 155; Significance: 4e-82; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 220 - 382
Target Start/End: Original strand, 48834128 - 48834290
Alignment:
Q  220 atcaaggttcatcctcacctttaatcacttgtaaaaggaaacacacgcaccacatgttttcatgccaaactccattagttgaaaggacctgagcacgtga 319  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48834128 atcaaggttcatcctcaccttcaatcacttgtaaaaggaaacacacgcaccacatgttttcatgccaaactccattagttgaaaggacctgagcacgtga 48834227  T
Q  320 acgttttacataatcgaaaattcaaaacaggaccacaacgcatatattgcaggaccactcata 382  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  48834228 acgttttacataatcgaaaattcaaaacaggaccacaacgcgtatattgcaggaccactcata 48834290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 8 - 193
Target Start/End: Original strand, 48833923 - 48834108
Alignment:
Q  8 aatcataaaccaagtatttgaaattaggtggttaatgagtttctcatgaaaatgaattgttcgagagaatgtaaatttgatttttgtataaaagaannnn 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||  |        
T  48833923 aatcataaaccaagtatttgaaattaggtggttaatgagtttctcacgaaaacgaattgttcaagagaatgtaaatttgatttttgtataaaaagaattt 48834022  T
Q  108 nnngttagactttacttcctttctgacggatcaacatgttgttcatatataagcttgataaattgaatcatcgatctctttatcac 193  Q
       ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  48834023 tttgttagactttacttcctttatgacggatcaacatgttgttcatatatacgcttgataaattgaatcatcgatctctttatcac 48834108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 430
Target Start/End: Complemental strand, 23624558 - 23624510
Alignment:
Q  382 aggtggggtttaatatgggaaaggagagttgtttcctatcatgggaaag 430  Q
    ||||||||||||| ||||||||| | | ||||||||||| |||||||||    
T  23624558 aggtggggtttaacatgggaaagaaaacttgtttcctattatgggaaag 23624510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 430
Target Start/End: Original strand, 24995851 - 24995899
Alignment:
Q  382 aggtggggtttaatatgggaaaggagagttgtttcctatcatgggaaag 430  Q
    ||||||||||||  |||||||||| ||||||||||| | ||||||||||    
T  24995851 aggtggggtttagaatgggaaaggggagttgtttcccaccatgggaaag 24995899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 430
Target Start/End: Complemental strand, 40320459 - 40320411
Alignment:
Q  382 aggtggggtttaatatgggaaaggagagttgtttcctatcatgggaaag 430  Q
    ||||||||||||  |||||||||||||||||||||| | ||||| ||||    
T  40320459 aggtggggtttagcatgggaaaggagagttgtttcccaccatggaaaag 40320411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 378 - 430
Target Start/End: Original strand, 28975335 - 28975387
Alignment:
Q  378 tcataggtggggtttaatatgggaaaggagagttgtttcctatcatgggaaag 430  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||| ||||    
T  28975335 tcataggtggggtttagcatgggaaaggagagttgtttcctatcatggaaaag 28975387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 430
Target Start/End: Complemental strand, 34035093 - 34035045
Alignment:
Q  382 aggtggggtttaatatgggaaaggagagttgtttcctatcatgggaaag 430  Q
    |||||| |||||| ||||||||||||| |||||||| ||||||||||||    
T  34035093 aggtggagtttaacatgggaaaggagaattgtttcccatcatgggaaag 34035045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 430
Target Start/End: Complemental strand, 24126759 - 24126719
Alignment:
Q  390 tttaatatgggaaaggagagttgtttcctatcatgggaaag 430  Q
    |||||| ||||||||| ||||||||||| ||||||||||||    
T  24126759 tttaatttgggaaaggggagttgtttcccatcatgggaaag 24126719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 383 - 430
Target Start/End: Original strand, 45297549 - 45297596
Alignment:
Q  383 ggtggggtttaatatgggaaaggagagttgtttcctatcatgggaaag 430  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  45297549 ggtggggtttagtatgggaaaggagagttgtttcccatcatgggaaag 45297596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 430
Target Start/End: Original strand, 49160985 - 49161034
Alignment:
Q  381 taggtggggtttaatatgggaaaggagagttgtttcctatcatgggaaag 430  Q
    |||||||||||||  |||||||||| ||||||||||||| ||||| ||||    
T  49160985 taggtggggtttagcatgggaaaggggagttgtttcctaccatggaaaag 49161034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 430
Target Start/End: Original strand, 17026883 - 17026931
Alignment:
Q  382 aggtggggtttaatatgggaaaggagagttgtttcctatcatgggaaag 430  Q
    |||||| |||||| ||||||||||| |||||||||| || |||||||||    
T  17026883 aggtggagtttaacatgggaaaggaaagttgtttcccataatgggaaag 17026931  T

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Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 430
Target Start/End: Complemental strand, 31556257 - 31556217
Alignment:
Q  390 tttaatatgggaaaggagagttgtttcctatcatgggaaag 430  Q
    |||||| ||||||||||||||| ||||| ||||||||||||    
T  31556257 tttaatttgggaaaggagagttctttcccatcatgggaaag 31556217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 430
Target Start/End: Original strand, 38922750 - 38922790
Alignment:
Q  390 tttaatatgggaaaggagagttgtttcctatcatgggaaag 430  Q
    |||||| ||||||||||||||| ||||||| ||||||||||    
T  38922750 tttaatttgggaaaggagagttatttcctaccatgggaaag 38922790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 430
Target Start/End: Complemental strand, 45807090 - 45807042
Alignment:
Q  382 aggtggggtttaatatgggaaaggagagttgtttcctatcatgggaaag 430  Q
    ||||||||||||  ||||||||| | ||||||||||||| |||||||||    
T  45807090 aggtggggtttagaatgggaaagcaaagttgtttcctatgatgggaaag 45807042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000003; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 430
Target Start/End: Complemental strand, 41261940 - 41261891
Alignment:
Q  381 taggtggggtttaatatgggaaaggagagttgtttcctatcatgggaaag 430  Q
    ||||||||||||| ||||||||| ||||||||||||||| ||||||||||    
T  41261940 taggtggggtttagtatgggaaatgagagttgtttcctaccatgggaaag 41261891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 417
Target Start/End: Complemental strand, 20351362 - 20351325
Alignment:
Q  380 ataggtggggtttaatatgggaaaggagagttgtttcc 417  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  20351362 ataggtggggtttagtatgggaatggagagttgtttcc 20351325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 430
Target Start/End: Original strand, 231435 - 231483
Alignment:
Q  382 aggtggggtttaatatgggaaaggagagttgtttcctatcatgggaaag 430  Q
    |||||||||||| |||||||||||  |||||||| ||| ||||||||||    
T  231435 aggtggggtttagtatgggaaagggaagttgttttctaccatgggaaag 231483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 430
Target Start/End: Original strand, 22499097 - 22499145
Alignment:
Q  382 aggtggggtttaatatgggaaaggagagttgtttcctatcatgggaaag 430  Q
    |||||| |||||| ||||||||||||| |||||| | ||||||||||||    
T  22499097 aggtggagtttaacatgggaaaggagaattgttttccatcatgggaaag 22499145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 430
Target Start/End: Original strand, 23383309 - 23383357
Alignment:
Q  382 aggtggggtttaatatgggaaaggagagttgtttcctatcatgggaaag 430  Q
    ||||||||||||  ||| |||||||||||||||||| | ||||||||||    
T  23383309 aggtggggtttagaatgagaaaggagagttgtttcccaccatgggaaag 23383357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 430
Target Start/End: Original strand, 30808628 - 30808668
Alignment:
Q  390 tttaatatgggaaaggagagttgtttcctatcatgggaaag 430  Q
    ||||| |||||||||||||||||||||| | ||||||||||    
T  30808628 tttaaaatgggaaaggagagttgtttcccaccatgggaaag 30808668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 430
Target Start/End: Complemental strand, 39429986 - 39429938
Alignment:
Q  382 aggtggggtttaatatgggaaaggagagttgtttcctatcatgggaaag 430  Q
    ||||||||||||  ||||||| |||||||||||||| | ||||||||||    
T  39429986 aggtggggtttagcatgggaatggagagttgtttcccaccatgggaaag 39429938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 430
Target Start/End: Original strand, 47376859 - 47376899
Alignment:
Q  390 tttaatatgggaaaggagagttgtttcctatcatgggaaag 430  Q
    |||||| ||||||||| ||||||||||| ||||||||||||    
T  47376859 tttaatttgggaaaggggagttgtttcccatcatgggaaag 47376899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 430
Target Start/End: Original strand, 52077101 - 52077149
Alignment:
Q  382 aggtggggtttaatatgggaaaggagagttgtttcctatcatgggaaag 430  Q
    |||||| |||||| |||||||||||||||| ||||| || |||||||||    
T  52077101 aggtggagtttaacatgggaaaggagagttatttcccatgatgggaaag 52077149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000003; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 390 - 468
Target Start/End: Complemental strand, 574469 - 574391
Alignment:
Q  390 tttaatatgggaaaggagagttgtttcctatcatgggaaagnnnnnnncaaccattagattacatagaaacattgatct 468  Q
    ||||||||| ||||||||||||||||  |||||| ||||||       ||||||||| |||||||||||||||||||||    
T  574469 tttaatatgagaaaggagagttgttttttatcataggaaagtttttttcaaccattaaattacatagaaacattgatct 574391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 383 - 430
Target Start/End: Complemental strand, 30781032 - 30780985
Alignment:
Q  383 ggtggggtttaatatgggaaaggagagttgtttcctatcatgggaaag 430  Q
    |||| ||||||| |||||||||||||||||||||| ||||||||||||    
T  30781032 ggtgaggtttaacatgggaaaggagagttgtttcccatcatgggaaag 30780985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 430
Target Start/End: Original strand, 42383719 - 42383767
Alignment:
Q  382 aggtggggtttaatatgggaaaggagagttgtttcctatcatgggaaag 430  Q
    |||||||||||| ||||||||||   |||||||||||||||||||||||    
T  42383719 aggtggggtttagtatgggaaagagaagttgtttcctatcatgggaaag 42383767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 430
Target Start/End: Complemental strand, 38688689 - 38688642
Alignment:
Q  383 ggtggggtttaatatgggaaaggagagttgtttcctatcatgggaaag 430  Q
    |||||||||||||||||||||| | |||||||||| || |||||||||    
T  38688689 ggtggggtttaatatgggaaagaaaagttgtttcccatgatgggaaag 38688642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 430
Target Start/End: Original strand, 34716422 - 34716471
Alignment:
Q  381 taggtggggtttaatatgggaaaggagagttgtttcctatcatgggaaag 430  Q
    |||||||||||||  ||||||| |||||||||||||| ||||||| ||||    
T  34716422 taggtggggtttagcatgggaatggagagttgtttcccatcatggaaaag 34716471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 430
Target Start/End: Complemental strand, 42384195 - 42384155
Alignment:
Q  390 tttaatatgggaaaggagagttgtttcctatcatgggaaag 430  Q
    |||| |||||||||||| | |||||||||||||||||||||    
T  42384195 tttagtatgggaaaggatacttgtttcctatcatgggaaag 42384155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 430
Target Start/End: Complemental strand, 43738019 - 43737979
Alignment:
Q  390 tttaatatgggaaaggagagttgtttcctatcatgggaaag 430  Q
    |||||| ||||||||||||||| ||||| ||||||||||||    
T  43738019 tttaatttgggaaaggagagttctttcccatcatgggaaag 43737979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 383 - 430
Target Start/End: Original strand, 12201377 - 12201424
Alignment:
Q  383 ggtggggtttaatatgggaaaggagagttgtttcctatcatgggaaag 430  Q
    ||||||||||| ||||||||||||||||||||||||| |||| |||||    
T  12201377 ggtggggtttagtatgggaaaggagagttgtttcctaccatgagaaag 12201424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000002; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 430
Target Start/End: Complemental strand, 6085752 - 6085702
Alignment:
Q  380 ataggtggggtttaatatgggaaaggagagttgtttcctatcatgggaaag 430  Q
    ||||||||||||||  |||||||||| ||||||||||||| ||||||||||    
T  6085752 ataggtggggtttagcatgggaaaggtgagttgtttcctaccatgggaaag 6085702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 430
Target Start/End: Original strand, 11872078 - 11872127
Alignment:
Q  381 taggtggggtttaatatgggaaaggagagttgtttcctatcatgggaaag 430  Q
    |||||||||||||| ||||||||  | |||||||||| ||||||||||||    
T  11872078 taggtggggtttaacatgggaaaaaaaagttgtttcccatcatgggaaag 11872127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 430
Target Start/End: Complemental strand, 37546605 - 37546565
Alignment:
Q  390 tttaatatgggaaaggagagttgtttcctatcatgggaaag 430  Q
    ||||| |||||||||| ||||||||||| ||||||||||||    
T  37546605 tttaaaatgggaaaggggagttgtttcccatcatgggaaag 37546565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 430
Target Start/End: Original strand, 37548005 - 37548045
Alignment:
Q  390 tttaatatgggaaaggagagttgtttcctatcatgggaaag 430  Q
    |||||| ||||||||||||||| ||||| ||||||||||||    
T  37548005 tttaatttgggaaaggagagttctttcccatcatgggaaag 37548045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 430
Target Start/End: Complemental strand, 42346155 - 42346106
Alignment:
Q  381 taggtggggtttaatatgggaaaggagagttgtttcctatcatgggaaag 430  Q
    |||||||||||||  ||||||| |||||||||||||| ||||||||||||    
T  42346155 taggtggggtttagcatgggaatggagagttgtttcccatcatgggaaag 42346106  T

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Target: scaffold0129 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 430
Target Start/End: Complemental strand, 43266 - 43219
Alignment:
Q  383 ggtggggtttaatatgggaaaggagagttgtttcctatcatgggaaag 430  Q
    ||||||||||| ||||| ||||| ||||||||||| ||||||||||||    
T  43266 ggtggggtttagtatggaaaaggggagttgtttcccatcatgggaaag 43219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 430
Target Start/End: Original strand, 27228 - 27268
Alignment:
Q  390 tttaatatgggaaaggagagttgtttcctatcatgggaaag 430  Q
    |||||| ||||||||||||||| ||||| ||||||||||||    
T  27228 tttaatttgggaaaggagagttctttcccatcatgggaaag 27268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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