View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4809-Insertion-6 (Length: 466)
Name: NF4809-Insertion-6
Description: NF4809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4809-Insertion-6 |
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Alignment Details
Target: chr2 (Bit Score: 430; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 430; E-Value: 0
Query Start/End: Original strand, 8 - 445
Target Start/End: Complemental strand, 45459576 - 45459139
Alignment:
| Q |
8 |
aaggagaggtaaaagtgacagcacctgtgctaagatctgtgactttcatgaaaccttccgatcccttagcttgtccactggattgaaacaatgtgctgac |
107 |
Q |
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| T |
45459576 |
aaggagaggtaaaagtgacagcacctgtgctaagatctgtgactttcatgaaaccctccgatcccttagcttgtccactggattgaaacaatgtgctgac |
45459477 |
T |
|
| Q |
108 |
agttatgggttgatttcccatgtgctggaatttttgaacatcaaagtagtcgaggatgacgtggatgcttaacaccttcttgatcacatccattggtttt |
207 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45459476 |
agttataggttgatttcccatgtgctggaatttttgaacatcaaagtagtcgaggatgacgtggatgcttaacaccttcttgatcacatccattggtttt |
45459377 |
T |
|
| Q |
208 |
cctgagataggtgccatcccactgttatcgactgcaagaactgttatcgtttgtctcgagtttatttcggttgctagttgggtttgggtgaggtagttgc |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45459376 |
cctgagataggtgccatcccactgttatcgactgcaagaactgttatcgtttgtctcgagtttatttcggttgctagttgggtttgggtgaggtagttgc |
45459277 |
T |
|
| Q |
308 |
tgtaactgctgtatgcagggtactgggacaatatttttgttatgtcaaaacaggttatagataagggaaacaacattattattagtaaaattaagaacat |
407 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45459276 |
tgtaactgctgtatgcagggtactgggacaatatttttgttatgtcaaaacaggttatagataagggaaacaacattattattagtaaaattaagaacat |
45459177 |
T |
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| Q |
408 |
cattgtcaatgaagaacatgacacacacattttgaata |
445 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
45459176 |
cattgtcaatgaagaacatgacacacacattttgaata |
45459139 |
T |
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