View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4809-Insertion-8 (Length: 345)

Name: NF4809-Insertion-8
Description: NF4809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4809-Insertion-8
NF4809-Insertion-8
[»] chr2 (1 HSPs)
chr2 (8-345)||(2920869-2921221)


Alignment Details
Target: chr2 (Bit Score: 298; Significance: 1e-167; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 8 - 345
Target Start/End: Complemental strand, 2921221 - 2920869
Alignment:
Q  8 ctctattggacacccttcttgttctgatatcacttttagtaaattcagtgaagatatctacaaacacaaataatatgaaaatttaggacatta------- 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           
T  2921221 ctctattggacacccttcttgttctgatatcacttttagtaaattcagtgaagatatctacaaacacaaataatatgaaaatttaggacattatatgaaa 2921122  T
Q  101 -atgaccaatgaagaaacaaaatcctaggacat-------gacaagacaacagagttgaggtaagcaccgttagacgacatagaaaacgctcatgagtgc 192  Q
     ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2921121 aatgaccaatgaagaaacaaaatcctaggacatatcatatgacaagacaacagagttgaggtaagcaccgttagacgacatagaaaacgctcatgagtgc 2921022  T
Q  193 tcaatccagacatctcaaccaaaccagcttcttccaatgtcaaaaacgttctcctctcactcttcttttcttctgcattgcacttgacatttcttctatg 292  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2921021 tcaatccagacatctcaaccaaaccagcttcttccaatgtcaaaaacgttctcctctcactcttcttttcttctgcattgcacttgacatttcttctatg 2920922  T
Q  293 tacttttatcttcctttgtcctatcaggcttgtttgtgtgtgtctatgatttg 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2920921 tacttttatcttcctttgtcctatcaggcttgtttgtgtgtgtctatgatttg 2920869  T

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