View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4809_high_1 (Length: 463)
Name: NF4809_high_1
Description: NF4809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4809_high_1 |
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Alignment Details
Target: chr2 (Bit Score: 423; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 423; E-Value: 0
Query Start/End: Original strand, 8 - 446
Target Start/End: Complemental strand, 45460010 - 45459572
Alignment:
| Q |
8 |
agataatactggtgctggagcttccacaggtgatattgccggccctggagctggagcttcatctggtacgtctactggagctggagctgcagctggtacg |
107 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |
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| T |
45460010 |
agataatactggtgctggagtttccacaggtgatattgccggccctggagctggagcttcaactggtacggctactggagctggagctgcagctggtacg |
45459911 |
T |
|
| Q |
108 |
gctactggagctggagctgctaccggcactggggactttactggtaccgaaactggagtagctattggcaccggtgaaactactggaactggcgatacca |
207 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45459910 |
gctactggagctggagctgctaccggcactggggactttactggtaccggaactggagtagctattggcaccggtgaaactactggaactggcgatacca |
45459811 |
T |
|
| Q |
208 |
caggcataggcactggaactataactggtgctgcaactggcactggtgataccactggcacaggagctggaataggtgaaacaacaggagccggagaagg |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45459810 |
caggcataggcactggaactataactggtgctgcaactggcactggtgataccactggcacaggagctggaataggtgaaacaacaggagccggagaagg |
45459711 |
T |
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| Q |
308 |
agcatgtgatgtggcattggaggaagcaagcaaagatggtggcaaaatgacagtgctgatctgcaccactgaaatattgtatggttgtgccacaacagct |
407 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45459710 |
agcatgtgatgtggcattggaggaagcaagcaaagatggtggcaaaatgacagtgctgatctgcaccactgaaatattgtatggttgtgccacaacagct |
45459611 |
T |
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| Q |
408 |
ttaaccaaattggcacctgttccattaggatcagaagga |
446 |
Q |
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| T |
45459610 |
ttaaccaaattggcacctgttccattaggatcagaagga |
45459572 |
T |
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