View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4809_low_8 (Length: 239)

Name: NF4809_low_8
Description: NF4809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4809_low_8
NF4809_low_8
[»] chr7 (24 HSPs)
chr7 (1-223)||(43567339-43567561)
chr7 (1-80)||(29034741-29034820)
chr7 (1-78)||(40763303-40763380)
chr7 (1-78)||(5240310-5240387)
chr7 (1-69)||(48454809-48454877)
chr7 (1-79)||(8292799-8292877)
chr7 (1-82)||(36279173-36279254)
chr7 (1-69)||(8380495-8380563)
chr7 (1-69)||(24359695-24359763)
chr7 (2-79)||(30538457-30538534)
chr7 (1-58)||(49069609-49069666)
chr7 (2-58)||(40066915-40066971)
chr7 (1-52)||(42222275-42222326)
chr7 (2-69)||(43958070-43958137)
chr7 (1-66)||(27053483-27053548)
chr7 (1-80)||(5347948-5348027)
chr7 (1-79)||(7322930-7323008)
chr7 (27-65)||(8258634-8258672)
chr7 (3-57)||(41188785-41188839)
chr7 (10-79)||(22707112-22707180)
chr7 (2-66)||(1910299-1910362)
chr7 (9-55)||(22521648-22521694)
chr7 (2-52)||(46478560-46478610)
chr7 (1-50)||(3681748-3681797)
[»] chr4 (30 HSPs)
chr4 (1-90)||(26040326-26040415)
chr4 (2-80)||(55669794-55669872)
chr4 (2-83)||(35808369-35808450)
chr4 (1-79)||(2362685-2362763)
chr4 (1-79)||(34016679-34016757)
chr4 (2-79)||(27839283-27839360)
chr4 (2-93)||(41956176-41956267)
chr4 (1-80)||(51290484-51290563)
chr4 (1-79)||(19876160-19876238)
chr4 (1-79)||(23765632-23765710)
chr4 (1-79)||(31168188-31168266)
chr4 (1-69)||(30475479-30475547)
chr4 (1-81)||(31754992-31755072)
chr4 (5-69)||(32131200-32131264)
chr4 (1-69)||(51266978-51267046)
chr4 (27-93)||(19328710-19328776)
chr4 (1-68)||(34316710-34316777)
chr4 (1-79)||(26831763-26831841)
chr4 (1-51)||(33951754-33951804)
chr4 (1-65)||(10100104-10100168)
chr4 (9-69)||(16559981-16560041)
chr4 (1-69)||(31487775-31487843)
chr4 (1-69)||(45688797-45688865)
chr4 (1-65)||(46695953-46696017)
chr4 (2-78)||(54339167-54339243)
chr4 (1-79)||(20811317-20811395)
chr4 (1-63)||(35675183-35675245)
chr4 (27-63)||(22665762-22665798)
chr4 (1-69)||(53566937-53567005)
chr4 (9-69)||(54400270-54400330)
[»] chr1 (30 HSPs)
chr1 (1-81)||(34874621-34874701)
chr1 (3-69)||(49508718-49508784)
chr1 (1-81)||(22346209-22346289)
chr1 (1-68)||(11385795-11385862)
chr1 (2-80)||(41147451-41147529)
chr1 (1-79)||(43433829-43433907)
chr1 (2-79)||(27209695-27209772)
chr1 (1-89)||(4940704-4940792)
chr1 (3-79)||(24140829-24140904)
chr1 (1-69)||(40845305-40845373)
chr1 (1-79)||(2125681-2125759)
chr1 (1-79)||(28850884-28850962)
chr1 (2-59)||(932151-932208)
chr1 (1-86)||(7190442-7190527)
chr1 (1-58)||(49901980-49902037)
chr1 (1-58)||(50295428-50295485)
chr1 (2-82)||(47655342-47655422)
chr1 (2-69)||(42607308-42607375)
chr1 (1-82)||(32213860-32213941)
chr1 (9-67)||(8244150-8244208)
chr1 (8-82)||(29966884-29966958)
chr1 (9-54)||(52396504-52396549)
chr1 (2-81)||(11386036-11386115)
chr1 (1-81)||(5945474-5945554)
chr1 (2-69)||(45721807-45721873)
chr1 (1-63)||(43168195-43168257)
chr1 (2-63)||(14331892-14331953)
chr1 (2-63)||(16691349-16691410)
chr1 (2-51)||(33930021-33930070)
chr1 (9-69)||(37275245-37275305)
[»] chr8 (21 HSPs)
chr8 (1-80)||(19389286-19389365)
chr8 (1-69)||(21016288-21016356)
chr8 (2-85)||(4989988-4990071)
chr8 (2-78)||(45338059-45338135)
chr8 (1-52)||(8018815-8018866)
chr8 (1-55)||(7532839-7532893)
chr8 (21-69)||(18808941-18808989)
chr8 (1-80)||(21016033-21016112)
chr8 (2-69)||(35930191-35930258)
chr8 (1-79)||(5129433-5129511)
chr8 (1-91)||(10694861-10694951)
chr8 (1-47)||(18069016-18069062)
chr8 (9-82)||(26672852-26672924)
chr8 (2-69)||(19976477-19976545)
chr8 (1-52)||(25249345-25249396)
chr8 (2-83)||(3174515-3174594)
chr8 (5-81)||(6939216-6939292)
chr8 (1-53)||(44874379-44874431)
chr8 (1-46)||(14855394-14855439)
chr8 (1-46)||(26195383-26195428)
chr8 (47-83)||(22488762-22488798)
[»] chr2 (23 HSPs)
chr2 (1-85)||(765121-765205)
chr2 (1-81)||(39401510-39401590)
chr2 (2-65)||(33726435-33726498)
chr2 (1-82)||(862643-862724)
chr2 (2-57)||(6999257-6999312)
chr2 (1-80)||(27495177-27495256)
chr2 (2-80)||(1321223-1321301)
chr2 (1-52)||(2966594-2966645)
chr2 (2-65)||(16361621-16361684)
chr2 (9-66)||(17603873-17603930)
chr2 (1-69)||(33864409-33864477)
chr2 (1-69)||(35445277-35445345)
chr2 (9-69)||(39085779-39085839)
chr2 (30-69)||(23685650-23685689)
chr2 (22-80)||(17056034-17056092)
chr2 (22-80)||(17068481-17068539)
chr2 (22-80)||(17074464-17074522)
chr2 (9-69)||(9991427-9991487)
chr2 (1-69)||(41436532-41436600)
chr2 (22-80)||(17095043-17095101)
chr2 (2-52)||(17118377-17118427)
chr2 (1-79)||(44299658-44299736)
chr2 (2-78)||(13997882-13997958)
[»] chr5 (22 HSPs)
chr5 (1-69)||(35653242-35653310)
chr5 (1-82)||(16315508-16315589)
chr5 (1-69)||(4421951-4422019)
chr5 (1-69)||(15915886-15915954)
chr5 (1-64)||(25017283-25017346)
chr5 (1-53)||(27823313-27823365)
chr5 (2-69)||(39567958-39568025)
chr5 (2-82)||(43414038-43414118)
chr5 (1-59)||(1759871-1759929)
chr5 (2-83)||(5151544-5151625)
chr5 (2-78)||(8410197-8410273)
chr5 (2-78)||(28143101-28143177)
chr5 (1-80)||(37243901-37243979)
chr5 (1-79)||(35945300-35945378)
chr5 (1-66)||(34546832-34546897)
chr5 (9-69)||(338751-338811)
chr5 (1-69)||(12068161-12068229)
chr5 (9-80)||(104905-104976)
chr5 (1-67)||(4962506-4962571)
chr5 (4-69)||(3639062-3639127)
chr5 (1-53)||(678504-678556)
chr5 (1-81)||(1479111-1479191)
[»] chr3 (24 HSPs)
chr3 (2-81)||(29915550-29915629)
chr3 (2-81)||(29964703-29964782)
chr3 (1-80)||(36730129-36730208)
chr3 (1-83)||(25102295-25102377)
chr3 (1-79)||(8715479-8715556)
chr3 (1-79)||(9067366-9067443)
chr3 (1-79)||(44570363-44570441)
chr3 (3-81)||(48136698-48136776)
chr3 (1-69)||(35306386-35306454)
chr3 (1-79)||(4759827-4759905)
chr3 (1-83)||(32415623-32415705)
chr3 (19-69)||(41346346-41346396)
chr3 (2-79)||(1803943-1804020)
chr3 (1-66)||(8847442-8847507)
chr3 (1-78)||(37509165-37509242)
chr3 (2-66)||(10854914-10854982)
chr3 (2-79)||(44695648-44695725)
chr3 (2-69)||(46317541-46317608)
chr3 (1-60)||(51817308-51817367)
chr3 (2-59)||(45899540-45899597)
chr3 (1-37)||(52570836-52570872)
chr3 (1-63)||(18780-18842)
chr3 (9-69)||(31647356-31647416)
chr3 (9-69)||(46055760-46055820)
[»] chr6 (8 HSPs)
chr6 (1-79)||(29692318-29692396)
chr6 (1-79)||(32786270-32786347)
chr6 (1-69)||(10855486-10855554)
chr6 (2-84)||(16437562-16437644)
chr6 (21-79)||(26572059-26572117)
chr6 (1-58)||(6866969-6867026)
chr6 (1-58)||(12191547-12191604)
chr6 (10-65)||(5578337-5578392)
[»] scaffold0062 (3 HSPs)
scaffold0062 (2-82)||(16746-16825)
scaffold0062 (2-82)||(26914-26993)
scaffold0062 (2-82)||(37080-37159)
[»] scaffold0809 (1 HSPs)
scaffold0809 (1-58)||(4268-4325)


Alignment Details
Target: chr7 (Bit Score: 199; Significance: 1e-108; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 43567561 - 43567339
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctccttttaaaaatggtgtatgttc 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43567561 cttttcaccattttccaatactataattctatttttatctccttatccaatgccccaagggcaatggttagcaatctccttttaaaaatggtgtatgttc 43567462  T
Q  101 ttgtatggattactggtaagagaggtatgcaatttctaagtttcagagatgcattgcaaatggaagaaaggaagatgtagaggaatgcaacttctagcag 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||  |||||||||    
T  43567461 ttgtatggattactggtaagagaggtatgcaatttctaagtttcagagatgcattgcaaatggaaggaaggaagatgtagaggtatgcagtttctagcag 43567362  T
Q  201 tcttatttaacatatttaataat 223  Q
    |||||||||||||||||||||||    
T  43567361 tcttatttaacatatttaataat 43567339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 29034741 - 29034820
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcct 80  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||| |||||||| ||| ||||||    
T  29034741 cttttcaccattttccaatactatatttatatttttatccccttatccaatgcctcaaggacaatggttagcattctcct 29034820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 40763303 - 40763380
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctc 78  Q
    |||||||||||||| ||||  |||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  40763303 cttttcaccatttttcaatgttatatttctatttttatccccttatccaatgccccaagggcaatggttagcattctc 40763380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 5240387 - 5240310
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctc 78  Q
    |||||||||||||| |||||||||| ||||||||||||||| |||||||||||| ||||| |||||||| ||| ||||    
T  5240387 cttttcaccatttttcaatactatatttctatttttatccctttatccaatgcctcaaggacaatggttagcattctc 5240310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 48454877 - 48454809
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggtt 69  Q
    ||||||||||||| |||||  |||| ||||||||||||||||||||||||||||||||||| |||||||    
T  48454877 cttttcaccatttcccaatgttatatttctatttttatccccttatccaatgccccaagggtaatggtt 48454809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 8292799 - 8292877
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcc 79  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||| | ||||| || ||| |||||    
T  8292799 cttttcaccattttccaatgctatatttctatttttatccccttatccaatgctccaaagacaatgattagcattctcc 8292877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 36279173 - 36279254
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctccttt 82  Q
    ||||||||||||||||||| ||||| || |||||||||||  ||||||||||||||||| | ||||||| ||| ||||||||    
T  36279173 cttttcaccattttccaatgctatatttatatttttatcctattatccaatgccccaagagtaatggttagcattctccttt 36279254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 8380495 - 8380563
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggtt 69  Q
    ||||||| ||||||||||| ||||| || |||||||||||||||||||||| |||||||||| ||||||    
T  8380495 cttttcatcattttccaatgctatatttttatttttatccccttatccaataccccaagggccatggtt 8380563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 24359763 - 24359695
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggtt 69  Q
    ||||| ||||||||||| | ||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  24359763 ctttttaccattttccattgctatatttctatttttatccccttatccaatacccgaagggcaatggtt 24359695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 30538534 - 30538457
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcc 79  Q
    ||||||| |||||| ||||||||| ||||||||||||||||||||| |||| ||||||| ||||| || ||| |||||    
T  30538534 ttttcactattttctaatactatatttctatttttatccccttatctaatgtcccaaggacaatgattagcattctcc 30538457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 49069609 - 49069666
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaa 58  Q
    |||||||||||||| |||||||||| |||||||||||||  |||||||||||||||||    
T  49069609 cttttcaccatttttcaatactatatttctatttttatcttcttatccaatgccccaa 49069666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 40066971 - 40066915
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaa 58  Q
    ||||||||||||| ||||| |||| ||||||||||||||||||||||||||| ||||    
T  40066971 ttttcaccatttttcaatattatatttctatttttatccccttatccaatgcaccaa 40066915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 42222275 - 42222326
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatg 52  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||| ||||    
T  42222275 cttttcaccattttccaataccatatttctatttttatccccttatctaatg 42222326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 43958137 - 43958070
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggtt 69  Q
    ||||||| |||||| ||||||||| ||||||||||||| ||||||||||||  | |||||||||||||    
T  43958137 ttttcacaattttctaatactatatttctatttttatcgccttatccaatggtctaagggcaatggtt 43958070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 27053548 - 27053483
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatg 66  Q
    |||||||||||||||  || ||||| ||||||||||||||| ||||||||||||| |||| |||||    
T  27053548 cttttcaccattttctgatgctatatttctatttttatccctttatccaatgccctaaggacaatg 27053483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 5348027 - 5347948
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcct 80  Q
    ||||||| |||||||||||  |||| |||||||| ||| ||||||| |||||||| ||||| ||||||| ||| ||||||    
T  5348027 cttttcatcattttccaatgttatatttctatttatattcccttattcaatgccctaagggtaatggttagcattctcct 5347948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 7323008 - 7322930
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcc 79  Q
    |||||||||||||| |||   |||| |||||||||||||| ||||||||||  | |||||||||||||| ||| |||||    
T  7323008 cttttcaccatttttcaaggttatatttctatttttatcctcttatccaatatctcaagggcaatggttagcattctcc 7322930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 65
Target Start/End: Complemental strand, 8258672 - 8258634
Alignment:
Q  27 ttctatttttatccccttatccaatgccccaagggcaat 65  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  8258672 ttctatttttatccccttatccgatgccccaagggcaat 8258634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 41188839 - 41188785
Alignment:
Q  3 tttcaccattttccaatactataattctatttttatccccttatccaatgcccca 57  Q
    ||||||||||||||||| ||||| || ||||||||||| |||||| |||||||||    
T  41188839 tttcaccattttccaatgctatatttatatttttatcctcttatcaaatgcccca 41188785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 79
Target Start/End: Original strand, 22707112 - 22707180
Alignment:
Q  10 attttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcc 79  Q
    |||||||||| ||||| |||||||||||| || |||| ||||||||||| |||||||||| ||| |||||    
T  22707112 attttccaatgctatatttctatttttat-cctttattcaatgccccaaaggcaatggttagcattctcc 22707180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 1910299 - 1910362
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatg 66  Q
    |||||||||||||| |||  |||| |||||||||||| |||||||| ||||||| ||||||||||    
T  1910299 ttttcaccattttctaatgttatatttctatttttat-cccttatcaaatgccctaagggcaatg 1910362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 22521648 - 22521694
Alignment:
Q  9 cattttccaatactataattctatttttatccccttatccaatgccc 55  Q
    ||||||||||| ||||| ||||| |||||||| ||||||||||||||    
T  22521648 cattttccaatgctatatttctagttttatcctcttatccaatgccc 22521694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 46478610 - 46478560
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatg 52  Q
    ||||||| ||||| ||||  |||| ||||||||||||||||||||||||||    
T  46478610 ttttcactatttttcaatgatatatttctatttttatccccttatccaatg 46478560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 3681748 - 3681797
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaa 50  Q
    |||||||||||||||||||  | || || |||||||||||||||||||||    
T  3681748 cttttcaccattttccaatgttgtatttttatttttatccccttatccaa 3681797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 26040415 - 26040326
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctccttttaaaaatg 90  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||| |||||||| |||||||    
T  26040415 cttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaaggacaatggttagcattctcctttaaaaaatg 26040326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 55669794 - 55669872
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcct 80  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  55669794 ttttcaccattttccaatgctatatttctatttttatccccttatccaatgccccaagggcaatggttagcattctcct 55669872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 35808450 - 35808369
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcctttt 83  Q
    ||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  35808450 ttttcacaattttccaatgctatatttctatttttatccccttatccaatgccccaagggcaatggttagcattctcctttt 35808369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 2362685 - 2362763
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcc 79  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||| ||| |||||    
T  2362685 cttttcaccattttccaatactatatttttatttttatccccttatccgatgccccaagggcaatggttagcattctcc 2362763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 34016679 - 34016757
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcc 79  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| |||||||| ||| |||||    
T  34016679 cttttcaccattttccaatgctatatttctatttttatccccttatccaatgtctcaaggacaatggttagcattctcc 34016757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 27839360 - 27839283
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcc 79  Q
    |||||| |||||| |||| ||||| |||||||||||| |||||||||||||||||||||||||||||| ||| |||||    
T  27839360 ttttcatcatttttcaatgctatatttctatttttattcccttatccaatgccccaagggcaatggttagcattctcc 27839283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 93
Target Start/End: Complemental strand, 41956267 - 41956176
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctccttttaaaaatggtg 93  Q
    |||||| |||||||||||  |||| |||||||||||||| ||||||| |||||||||||||||||||| ||| |||||| || || ||||||    
T  41956267 ttttcatcattttccaatgttatatttctatttttatcctcttatccgatgccccaagggcaatggttagcattctcctattgaatatggtg 41956176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 51290484 - 51290563
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcct 80  Q
    ||||||| ||||||||||| ||||| ||||| |||||||||||||||||||| ||||||| |||||||| ||| ||||||    
T  51290484 cttttcatcattttccaatgctatatttctaattttatccccttatccaatgtcccaaggacaatggttagcattctcct 51290563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 19876238 - 19876160
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcc 79  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||  |||||| ||| ||| ||| |||||    
T  19876238 cttttcactattttccaatactatatttctatttttatccccttatccaatgcttcaagggtaattgttagcattctcc 19876160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 23765632 - 23765710
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcc 79  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||||||| ||||| |||| |||||||||| ||| |||||    
T  23765632 cttttcaccattttccaatgctatatttcaatttttatccccttatctaatgcaccaaaggcaatggttagcattctcc 23765710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 31168188 - 31168266
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcc 79  Q
    ||||||||||||||||||| ||| |||||||||||||||||||| || ||||| ||||||||||| ||| ||| |||||    
T  31168188 cttttcaccattttccaatgctaaaattctatttttatccccttgtctaatgctccaagggcaatagttagcattctcc 31168266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 30475479 - 30475547
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggtt 69  Q
    |||||||||||||| |||||||||| || |||||||||| ||||||||||| ||| |||||||||||||    
T  30475479 cttttcaccatttttcaatactatatttttatttttatctccttatccaataccctaagggcaatggtt 30475547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 31754992 - 31755072
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcctt 81  Q
    ||||||| |||||| |||| ||||| || |||||||||||||||||||||| |||||| |||||||||| ||| |||||||    
T  31754992 cttttcatcatttttcaattctatatttatatttttatccccttatccaataccccaatggcaatggttagcattctcctt 31755072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 32131200 - 32131264
Alignment:
Q  5 tcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggtt 69  Q
    ||||||||||||||||||||| ||||||||||||| | ||||||||||  |||||||||||||||    
T  32131200 tcaccattttccaatactatatttctatttttatctctttatccaatgttccaagggcaatggtt 32131264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 51266978 - 51267046
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggtt 69  Q
    |||||||||||||| |||||||||| ||||||||||||| ||||||||||||  ||||| |||||||||    
T  51266978 cttttcaccatttttcaatactatatttctatttttatctccttatccaatgttccaagagcaatggtt 51267046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 93
Target Start/End: Complemental strand, 19328776 - 19328710
Alignment:
Q  27 ttctatttttatccccttatccaatgccccaagggcaatggttggcaatctccttttaaaaatggtg 93  Q
    ||||||||||||||||||||||||||||| |||  |||||||| ||| ||||| |||||||||||||    
T  19328776 ttctatttttatccccttatccaatgccctaagaacaatggttagcattctccatttaaaaatggtg 19328710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 34316777 - 34316710
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggt 68  Q
    |||||||| ||||| ||||  |||| || |||||||||| ||||||||||||||||||||||||||||    
T  34316777 cttttcactatttttcaatgttatatttatatttttatctccttatccaatgccccaagggcaatggt 34316710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 26831841 - 26831763
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcc 79  Q
    ||||| |||||||| ||||| |||| |||||||||||||| ||||| ||||||||||||| |||| ||| ||| |||||    
T  26831841 ctttttaccattttacaatattatatttctatttttatcctcttattcaatgccccaaggacaattgttagcattctcc 26831763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 33951754 - 33951804
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaat 51  Q
    |||||||| |||||||||||||||| |||||||||||||||||||| ||||    
T  33951754 cttttcacaattttccaatactatatttctatttttatccccttattcaat 33951804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 10100168 - 10100104
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaat 65  Q
    ||||||||||||||| |||| |||| || ||||||||||||||||||| ||| ||||||| ||||    
T  10100168 cttttcaccattttctaatattatatttatatttttatccccttatccgatgtcccaaggacaat 10100104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 16560041 - 16559981
Alignment:
Q  9 cattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggtt 69  Q
    |||||||||| || | | |||||||||||| || |||||||||||||||||||||||||||    
T  16560041 cattttccaacacaaaatttctatttttattcctttatccaatgccccaagggcaatggtt 16559981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 31487775 - 31487843
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggtt 69  Q
    ||||| || ||||| |||| ||||| || ||||||||||||||||| |||||| |||||||||||||||    
T  31487775 cttttaactatttttcaatgctatatttttatttttatccccttattcaatgctccaagggcaatggtt 31487843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 45688797 - 45688865
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggtt 69  Q
    ||||||| |||||| |||| ||||  ||||||||||||||||||||||||| |||||||  ||||||||    
T  45688797 cttttcatcatttttcaatgctatgtttctatttttatccccttatccaataccccaagaacaatggtt 45688865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 46696017 - 46695953
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaat 65  Q
    |||||||||||||| |||| ||||| || ||||||||||| |||||||||| |||||| ||||||    
T  46696017 cttttcaccatttttcaatcctatatttttatttttatccacttatccaataccccaaaggcaat 46695953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 54339167 - 54339243
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctc 78  Q
    ||||||||||||| ||||  |||| || |||||||||||| |||||||||||||||| | |||||||| ||| ||||    
T  54339167 ttttcaccatttttcaatgttatatttatatttttatccctttatccaatgccccaacgacaatggttagcattctc 54339243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 20811317 - 20811395
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcc 79  Q
    |||||||||| ||||||||  |||| ||||||||||||||||||||  ||| |||||| |||||| ||| ||| |||||    
T  20811317 cttttcaccaatttccaatgttatatttctatttttatccccttatttaataccccaaaggcaatagttagcattctcc 20811395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 35675245 - 35675183
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggca 63  Q
    |||||||| |||| ||||||| ||| |||||||||||||  |||| |||||||||||||||||    
T  35675245 cttttcactatttcccaatacaatatttctatttttatcgtcttaaccaatgccccaagggca 35675183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 22665762 - 22665798
Alignment:
Q  27 ttctatttttatccccttatccaatgccccaagggca 63  Q
    |||||||||| | ||||||||||||||||||||||||    
T  22665762 ttctatttttgttcccttatccaatgccccaagggca 22665798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 53567005 - 53566937
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggtt 69  Q
    ||||| || ||||| |||| ||||| ||||||||||||| | ||| |||||||||||| | ||||||||    
T  53567005 ctttttactatttttcaatgctatatttctatttttatctctttaaccaatgccccaaagacaatggtt 53566937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 54400270 - 54400330
Alignment:
Q  9 cattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggtt 69  Q
    |||||||||| || | | || ||||||||| || |||||||||||||| ||||||||||||    
T  54400270 cattttccaacacaaaatttttatttttattcctttatccaatgccccgagggcaatggtt 54400330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 34874621 - 34874701
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcctt 81  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  34874621 cttttcaccattttccaatgctatatttctatttttatccccttatccaatgccccaagggcaatggttagcattctcctt 34874701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 49508784 - 49508718
Alignment:
Q  3 tttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggtt 69  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  49508784 tttcaccattttccaatgctatatttctatttttatccccttatccaatgccccaagggcaatggtt 49508718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 22346289 - 22346209
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcctt 81  Q
    |||||||||||||| |||||||||| |||||||||||| ||||||||||| |||||||||||||||||| ||| |||||||    
T  22346289 cttttcaccatttttcaatactatatttctatttttattcccttatccaaagccccaagggcaatggttagcattctcctt 22346209  T

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Target: chr1; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 11385862 - 11385795
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggt 68  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||    
T  11385862 cttttcaccattttccaatactatatttctatttttatccccttatccaatgctgcaagggcaatggt 11385795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 41147529 - 41147451
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcct 80  Q
    |||| |||||||| |||| ||||| |||||||||||||||||||||||||||||||||| |||||||| ||| ||||||    
T  41147529 tttttaccatttttcaatgctatatttctatttttatccccttatccaatgccccaaggacaatggttagcattctcct 41147451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 43433829 - 43433907
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcc 79  Q
    ||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||| ||||| ||| ||| |||||    
T  43433829 cttttcaccattttttaatactatatttctatttttatccccttatccaatgccccaagagcaatagttagcattctcc 43433907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 27209772 - 27209695
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcc 79  Q
    ||||||||||||||||||  |||| ||||||||||||||| |||||||||||||||||| |||||||| ||| |||||    
T  27209772 ttttcaccattttccaatgttatatttctatttttatccctttatccaatgccccaaggacaatggttagcattctcc 27209695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 4940792 - 4940704
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctccttttaaaaat 89  Q
    ||||| ||||||||||||| ||||| ||||||||||||||||||||||||||| || |  ||||||||| ||| |||||||| ||||||    
T  4940792 cttttaaccattttccaatgctatatttctatttttatccccttatccaatgcgcctaaagcaatggttagcattctcctttaaaaaat 4940704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 24140829 - 24140904
Alignment:
Q  3 tttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcc 79  Q
    |||||||||||||||||| |||| |||||||||||||||||||| ||||||||||| |||||||||| ||| |||||    
T  24140829 tttcaccattttccaatagtatatttctatttttatccccttat-caatgccccaaaggcaatggttagcattctcc 24140904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 40845305 - 40845373
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggtt 69  Q
    |||||||||||||| |||||||||| |||||||||||||||||||| ||||| | ||||||||||||||    
T  40845305 cttttcaccatttttcaatactatatttctatttttatccccttattcaatgtctcaagggcaatggtt 40845373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 2125759 - 2125681
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcc 79  Q
    |||||||| ||||| |||| ||||| |||||||||||||||||||||||||||||||||  |||||||| ||| |||||    
T  2125759 cttttcacaatttttcaatgctatatttctatttttatccccttatccaatgccccaagaacaatggttagcattctcc 2125681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 28850962 - 28850884
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcc 79  Q
    |||||||||||||||||||  |||| |||||||||||| | |||||| ||||||||||||||||||||| ||| |||||    
T  28850962 cttttcaccattttccaatgttatatttctatttttattctcttatctaatgccccaagggcaatggttagcattctcc 28850884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 932208 - 932151
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaag 59  Q
    |||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  932208 ttttcatcattttccaatgctatatttctatttttatccccttatccaatgccccaag 932151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 7190527 - 7190442
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctccttttaaa 86  Q
    ||||||| ||||||  ||| ||||| |||||||||||||| |||| |||||||||||||||||| |||| ||| ||||||||||||    
T  7190527 cttttcatcatttttgaatgctatatttctatttttatcctcttaaccaatgccccaagggcaaaggttagcattctccttttaaa 7190442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 49901980 - 49902037
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaa 58  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||    
T  49901980 cttttcaccattttccaatactatatttctatttttatcctcttatccaataccccaa 49902037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 50295485 - 50295428
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaa 58  Q
    |||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  50295485 cttttcactattttccaatactatatttctatttttacccccttatccaatgccccaa 50295428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 47655422 - 47655342
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctccttt 82  Q
    ||||||||||||| |||| ||||| |||||||||||||||||||| ||||| |  ||||||||||||| ||| ||||||||    
T  47655422 ttttcaccatttttcaatgctatacttctatttttatccccttattcaatgtcttaagggcaatggttagcattctccttt 47655342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 42607375 - 42607308
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggtt 69  Q
    ||||||||||||| |||| ||||| || |||||||||||||||||||||| ||| |||||||||||||    
T  42607375 ttttcaccatttttcaatgctatatttttatttttatccccttatccaataccctaagggcaatggtt 42607308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 32213941 - 32213860
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctccttt 82  Q
    |||||||||||||||||||  | || ||||||||||||||||||||| |||| |||||| ||||||||| | | ||||||||    
T  32213941 cttttcaccattttccaatgttctatttctatttttatccccttatctaatgtcccaagagcaatggttagtattctccttt 32213860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 8244150 - 8244208
Alignment:
Q  9 cattttccaatactataattctatttttatccccttatccaatgccccaagggcaatgg 67  Q
    |||||||||||  |||| |||||| |||||||||||||||||||||||||| |||||||    
T  8244150 cattttccaatgttatatttctatatttatccccttatccaatgccccaagagcaatgg 8244208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 29966884 - 29966958
Alignment:
Q  8 ccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctccttt 82  Q
    ||||||| |||| ||||| || |||||||||||||||||||||||| |||||| ||||||||  || ||||||||    
T  29966884 ccatttttcaatgctatatttatatttttatccccttatccaatgctccaaggacaatggttaacattctccttt 29966958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 52396504 - 52396549
Alignment:
Q  9 cattttccaatactataattctatttttatccccttatccaatgcc 54  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||    
T  52396504 catttttcaatactatatttctatttttatccccttatccaatgcc 52396549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 11386036 - 11386115
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcctt 81  Q
    |||| ||||||||||||| ||||| ||||||||||||||  ||||| |||| ||||||| |||||||  ||| |||||||    
T  11386036 tttttaccattttccaatgctatatttctatttttatccaattatctaatgtcccaaggacaatggtgagcattctcctt 11386115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 5945474 - 5945554
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcctt 81  Q
    |||||||||||||| ||||   ||| ||||||||||||  | ||||||||||| |||||| |||||||| ||| |||||||    
T  5945474 cttttcaccatttttcaatgtcatatttctatttttatttcgttatccaatgctccaaggacaatggttagcattctcctt 5945554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 45721807 - 45721873
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggtt 69  Q
    |||| |||||||||||||  |||| || |||||||||| ||||||||||||| |||| ||||||||||    
T  45721807 tttttaccattttccaatgttatatttttatttttatcaccttatccaatgctccaa-ggcaatggtt 45721873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 43168195 - 43168257
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggca 63  Q
    ||||||||||||| ||||||| ||  |||||||||||||  |||| ||||||||| |||||||    
T  43168195 cttttcaccatttcccaatacaatgtttctatttttatcatcttaaccaatgccctaagggca 43168257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 14331892 - 14331953
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggca 63  Q
    |||||||||||| ||||||| ||  |||||||||||||   ||| |||||||||||||||||    
T  14331892 ttttcaccatttcccaatacaatgtttctatttttatcattttaaccaatgccccaagggca 14331953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 16691349 - 16691410
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggca 63  Q
    |||| ||||||| ||||||| ||  |||||||||||||  |||| |||||||||||||||||    
T  16691349 tttttaccatttcccaatacaatgtttctatttttatcatcttaaccaatgccccaagggca 16691410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 33930021 - 33930070
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaat 51  Q
    ||||||| ||||| |||| ||||| || ||||||||||||||||||||||    
T  33930021 ttttcactatttttcaatgctatatttatatttttatccccttatccaat 33930070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 37275305 - 37275245
Alignment:
Q  9 cattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggtt 69  Q
    ||||||||||||| | | |||||||||| | || ||||||||||||  |||||||||||||    
T  37275305 cattttccaatacaaaatttctatttttgtacctttatccaatgcctgaagggcaatggtt 37275245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 4e-28; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 19389365 - 19389286
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcct 80  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  19389365 cttttcacaattttccaatactatatttctatttttatccccttatccaatgccccaagggcaatggttagcattctcct 19389286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 21016288 - 21016356
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggtt 69  Q
    |||||||||||||| ||||| |||| |||||||||||||||||||||||| ||||||| ||||||||||    
T  21016288 cttttcaccatttttcaatattatatttctatttttatccccttatccaaagccccaaaggcaatggtt 21016356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 85
Target Start/End: Original strand, 4989988 - 4990071
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctccttttaa 85  Q
    ||||||| |||||||||| ||||| |||||||||||||||||||||||||||  ||||| ||||| || ||| |||||||||||    
T  4989988 ttttcactattttccaatgctatatttctatttttatccccttatccaatgctacaaggacaatgattagcattctccttttaa 4990071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 45338059 - 45338135
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctc 78  Q
    ||||||||||||| ||||  |||| ||||||||||||||||||||||||||||| |||| |||||||| ||| ||||    
T  45338059 ttttcaccatttttcaatgttatatttctatttttatccccttatccaatgcccaaaggacaatggttagcattctc 45338135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 8018815 - 8018866
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatg 52  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  8018815 cttttcaccattttccaatattatatttctatttttatccccttatccaatg 8018866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 7532839 - 7532893
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccc 55  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||    
T  7532839 cttttcaccattttccaatacaatatttctatttttatccccttaaccaatgccc 7532893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 18808941 - 18808989
Alignment:
Q  21 ctataattctatttttatccccttatccaatgccccaagggcaatggtt 69  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||    
T  18808941 ctataattatacttttatccccttatccaatgccccaagggcaatggtt 18808989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 21016112 - 21016033
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcct 80  Q
    ||||| |||||||| ||||  |||| |||||||||||||||||||||||| ||| ||| |||||||||| ||| ||||||    
T  21016112 cttttaaccatttttcaatgttatatttctatttttatccccttatccaaagcctcaaaggcaatggttagcattctcct 21016033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 35930191 - 35930258
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggtt 69  Q
    |||||| |||||| |||||||||| || ||||||||||  |||||||||||| |||||||||||||||    
T  35930191 ttttcatcatttttcaatactatatttttatttttatcttcttatccaatgctccaagggcaatggtt 35930258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 5129511 - 5129433
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcc 79  Q
    ||||||| |||||| |||| ||||| ||| ||||||||||||||||| ||||| | ||||||||||||| ||| |||||    
T  5129511 cttttcatcatttttcaatgctatatttcaatttttatccccttatcaaatgctctaagggcaatggttagcattctcc 5129433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 10694861 - 10694951
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctccttttaaaaatgg 91  Q
    ||||| ||||||||  ||||||||| || |||||| ||||||||||||||| | ||||||  |||| || ||| |||||||||||||||||    
T  10694861 ctttttaccatttttaaatactatatttttattttaatccccttatccaatacaccaaggataatgattagcattctccttttaaaaatgg 10694951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 18069016 - 18069062
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatc 47  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||    
T  18069016 cttttcaccattttccaatgctatatttctatttttatccccttatc 18069062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 26672852 - 26672924
Alignment:
Q  9 cattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctccttt 82  Q
    ||||||||||| ||||| ||||||||||||||| |||||||||  ||||||| |||||||| ||| ||||||||    
T  26672852 cattttccaatgctatatttctatttttatccctttatccaat-acccaaggacaatggttagcattctccttt 26672924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 19976545 - 19976477
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccc-cttatccaatgccccaagggcaatggtt 69  Q
    ||||||||||||| ||||| |||| ||||| ||||||||| ||||||||| ||||||| ||||||||||    
T  19976545 ttttcaccatttttcaatattatatttctacttttatcccacttatccaaagccccaaaggcaatggtt 19976477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 25249396 - 25249345
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatg 52  Q
    ||||||||||||||||||| ||||| || |||||||| ||||||||||||||    
T  25249396 cttttcaccattttccaatgctatatttttatttttacccccttatccaatg 25249345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 3174515 - 3174594
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcctttt 83  Q
    |||||||||||||||||||  ||| ||||||||||||||||| |||||| |||| |  | |||||||| ||| |||||||||    
T  3174515 ttttcaccattttccaatataatatttctatttttatcccctcatccaacgcccta--gacaatggttagcattctcctttt 3174594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 81
Target Start/End: Original strand, 6939216 - 6939292
Alignment:
Q  5 tcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcctt 81  Q
    |||||||||| ||||  |||| ||||||||||||| | |||| |||||||||| || |||||||| ||| |||||||    
T  6939216 tcaccatttttcaatgttatatttctatttttatctcattattcaatgccccatggacaatggttagcattctcctt 6939292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 44874379 - 44874431
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgc 53  Q
    |||||||||||||| ||||  |||| || ||||||||||||||||||||||||    
T  44874379 cttttcaccatttttcaatgttatatttatatttttatccccttatccaatgc 44874431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 14855439 - 14855394
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttat 46  Q
    |||||||| |||||  ||||||||| ||||||||||||||||||||    
T  14855439 cttttcactattttttaatactatatttctatttttatccccttat 14855394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 26195428 - 26195383
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttat 46  Q
    |||||||| ||||||||||  |||| ||||||||||||||||||||    
T  26195428 cttttcacaattttccaatgttatatttctatttttatccccttat 26195383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 83
Target Start/End: Complemental strand, 22488798 - 22488762
Alignment:
Q  47 ccaatgccccaagggcaatggttggcaatctcctttt 83  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  22488798 ccaatgccccaagggcaatggttagcattctcctttt 22488762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 3e-26; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 765205 - 765121
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctccttttaa 85  Q
    |||||||| ||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  765205 cttttcacaattttccaatgttatatttctatttttatccccttatccaatgccccaagggcaatggttagcattctccttttaa 765121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 39401590 - 39401510
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcctt 81  Q
    |||||||||||||| ||||  |||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  39401590 cttttcaccatttttcaatgttatatttctatttttatccccttatccaatgccccaagggcaatggttagcattctcctt 39401510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 33726435 - 33726498
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaat 65  Q
    ||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||    
T  33726435 ttttcaccatttttcaatactatatttttatttttatccccttatccaatgccccaagggcaat 33726498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 862643 - 862724
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctccttt 82  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||| |||||||| ||||||||| ||| ||| ||| ||||    
T  862643 cttttcaccattttccaatactatatttctatttttatcccattattcaatgccctaagggcaattgttagcattcttcttt 862724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 6999257 - 6999312
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgcccca 57  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||    
T  6999257 ttttcaccattttccaatactatatttctatttttatctccttatccattgcccca 6999312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 27495177 - 27495256
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcct 80  Q
    ||||||||||||||| |||  |||| || ||||||||||||||||| |||||||||||| ||||||||| ||| ||||||    
T  27495177 cttttcaccattttctaatgttatatttttatttttatccccttattcaatgccccaagtgcaatggttagcattctcct 27495256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 1321223 - 1321301
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcct 80  Q
    |||| |||||||||||||  |||| |||||||||||||| |||||||||||| |||||| |||||||| ||| ||||||    
T  1321223 tttttaccattttccaatgttatatttctatttttatcctcttatccaatgctccaaggacaatggttagcattctcct 1321301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 2966594 - 2966645
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatg 52  Q
    |||||||||||||||||||  |||| ||||||||||||||||||||||||||    
T  2966594 cttttcaccattttccaatgttatatttctatttttatccccttatccaatg 2966645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 16361621 - 16361684
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaat 65  Q
    |||| |||||||||||||  |||| |||||||||||| |||||||||||||| |||||||||||    
T  16361621 tttttaccattttccaatgttatatttctatttttattcccttatccaatgctccaagggcaat 16361684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 17603873 - 17603930
Alignment:
Q  9 cattttccaatactataattctatttttatccccttatccaatgccccaagggcaatg 66  Q
    |||||| |||| ||||| ||||||||||||| | ||||||||||||||||||||||||    
T  17603873 catttttcaatgctatatttctatttttatcgcgttatccaatgccccaagggcaatg 17603930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 33864409 - 33864477
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggtt 69  Q
    ||||||||||||||||||| | ||| || ||||||||||| ||||| ||||| | ||||||||||||||    
T  33864409 cttttcaccattttccaatgcgatatttttatttttatcctcttattcaatgtctcaagggcaatggtt 33864477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 35445345 - 35445277
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggtt 69  Q
    |||||||||||||| ||||  |||| || ||||||||||||||||| |||||||| ||||| |||||||    
T  35445345 cttttcaccatttttcaatgttatatttatatttttatccccttattcaatgccctaagggtaatggtt 35445277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 39085839 - 39085779
Alignment:
Q  9 cattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggtt 69  Q
    |||||||||||  |||| ||||||||||||||| |||||||||| |||||| |||||||||    
T  39085839 cattttccaatgttatatttctatttttatccctttatccaatgtcccaagagcaatggtt 39085779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 69
Target Start/End: Complemental strand, 23685689 - 23685650
Alignment:
Q  30 tatttttatccccttatccaatgccccaagggcaatggtt 69  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  23685689 tatttttatccctttatccaatgccccaagggcaatggtt 23685650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 17056092 - 17056034
Alignment:
Q  22 tataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcct 80  Q
    |||| |||| |||||||||| ||||||||||||| ||||||||||||| ||| ||||||    
T  17056092 tatatttctttttttatccctttatccaatgccctaagggcaatggttagcattctcct 17056034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 17068539 - 17068481
Alignment:
Q  22 tataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcct 80  Q
    |||| |||| |||||||||| ||||||||||||| ||||||||||||| ||| ||||||    
T  17068539 tatatttctttttttatccctttatccaatgccctaagggcaatggttagcattctcct 17068481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 17074522 - 17074464
Alignment:
Q  22 tataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcct 80  Q
    |||| ||||||||||||||| ||||| ||||||| ||||||||||||| ||| ||||||    
T  17074522 tatatttctatttttatccctttatctaatgccctaagggcaatggttagcattctcct 17074464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 9991487 - 9991427
Alignment:
Q  9 cattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggtt 69  Q
    ||||||||||||| | | |||||||||| |  | |||||||||||||||||||||||||||    
T  9991487 cattttccaatacaaaatttctatttttgtttctttatccaatgccccaagggcaatggtt 9991427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 41436532 - 41436600
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggtt 69  Q
    ||||||| |||||| |||||||||| || ||||||||||||||||| ||||  ||||||  ||||||||    
T  41436532 cttttcatcatttttcaatactatatttttatttttatccccttattcaatatcccaagaacaatggtt 41436600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 17095101 - 17095043
Alignment:
Q  22 tataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcct 80  Q
    |||| ||||||||||||||| ||||||||||||| |||  |||||||| ||| ||||||    
T  17095101 tatatttctatttttatccctttatccaatgccctaagaacaatggttagcattctcct 17095043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 17118427 - 17118377
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatg 52  Q
    |||||| ||||||||| || |||| ||||||||||||||| ||||||||||    
T  17118427 ttttcaacattttccagtattatatttctatttttatccctttatccaatg 17118377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 44299736 - 44299658
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcc 79  Q
    |||||||||||||| | |  ||||| |||||||||||||| |||| ||||||||||||  |||||| || ||| |||||    
T  44299736 cttttcaccatttttcgaggctatatttctatttttatcctcttacccaatgccccaaaagcaatgattagcattctcc 44299658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 13997958 - 13997882
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctc 78  Q
    ||||||| ||||| |||| ||||| |||||||||||| |||||||| ||| || |||  ||||||||| ||| ||||    
T  13997958 ttttcacaatttttcaatgctatatttctatttttattcccttatctaattcctcaaaagcaatggttagcattctc 13997882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 6e-24; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 35653310 - 35653242
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggtt 69  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  35653310 cttttcaccattttccaatgctatatttctatttttatccccttatccaatgcaccaagggcaatggtt 35653242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 16315589 - 16315508
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctccttt 82  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||| |||||| ||||||| ||||| ||| ||||||||    
T  16315589 cttttcaccattttccaatgctatatttctatttttatccccttatccgatgcccaaagggcagtggttagcattctccttt 16315508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 4422019 - 4421951
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggtt 69  Q
    ||||||||||||||||||| ||||| |||||||||||||| |||||||||||||| |||||||||||||    
T  4422019 cttttcaccattttccaatgctatatttctatttttatcctcttatccaatgccctaagggcaatggtt 4421951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 15915886 - 15915954
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggtt 69  Q
    ||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||| |||||||||    
T  15915886 cttttcaccattttccaatgctatatttctatttttattcccttatccaatgccccaagtgcaatggtt 15915954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 25017346 - 25017283
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaa 64  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  25017346 cttttcacaattttccaatactatatttctatttttatccccttatccaatgcctcaagggcaa 25017283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 27823313 - 27823365
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgc 53  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  27823313 cttttcaccattttccaatactatatttctatttttatccccttatccaatgc 27823365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 39567958 - 39568025
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggtt 69  Q
    |||||| ||||||||||| ||||| || |||||||||||| |||||||||||||||||||||||||||    
T  39567958 ttttcatcattttccaatgctatatttatatttttatcccattatccaatgccccaagggcaatggtt 39568025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 43414118 - 43414038
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctccttt 82  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||  || ||||||||||||  || ||| ||||||||    
T  43414118 ttttcaccattttccaatgctatatttctatttttatccccttatcccttgtcccaagggcaattcttagcattctccttt 43414038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 1759871 - 1759929
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaag 59  Q
    |||||| ||||||| |||||||||| |||||||||||||| ||||||||||||||||||    
T  1759871 cttttctccatttttcaatactatatttctatttttatcctcttatccaatgccccaag 1759929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 5151544 - 5151625
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcctttt 83  Q
    |||||| |||||||||||  |||| ||||||||||||||||||||| |||||| ||| | |||||||| ||| |||||||||    
T  5151544 ttttcatcattttccaatgttatatttctatttttatccccttatcaaatgcctcaatgacaatggttagcactctcctttt 5151625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 8410197 - 8410273
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctc 78  Q
    |||| ||||||||| ||||||||| || |||||||||||||||||| ||| |||||| |||||||||| ||| ||||    
T  8410197 tttttaccattttctaatactatatttttatttttatccccttatctaataccccaaaggcaatggttagcattctc 8410273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 28143177 - 28143101
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctc 78  Q
    |||||||||||| |||||  |||| ||||||||||||| |||||| ||||| |||||||||||||||| ||| ||||    
T  28143177 ttttcaccatttcccaatgttatatttctatttttatctccttattcaatgtcccaagggcaatggttagcattctc 28143101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 37243901 - 37243979
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcct 80  Q
    |||||||||||||||||||| |||| || ||||||||| || |||||||||||| ||||||||||| || ||| ||||||    
T  37243901 cttttcaccattttccaatattatatttttatttttat-cctttatccaatgcctcaagggcaatgattagcattctcct 37243979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 35945300 - 35945378
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcc 79  Q
    |||||||| ||||||||||  |||| |||||||||||| |||||||||||| ||||||| |||||| || ||| |||||    
T  35945300 cttttcactattttccaatgttatatttctatttttattcccttatccaataccccaagagcaatgattagcattctcc 35945378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 34546832 - 34546897
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatg 66  Q
    |||||||||||||| ||||  |||| ||||||||||||||||||||||||| | |||||| |||||    
T  34546832 cttttcaccatttttcaatgttatatttctatttttatccccttatccaatactccaaggacaatg 34546897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 338811 - 338751
Alignment:
Q  9 cattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggtt 69  Q
    |||||| |||||  ||| || |||||||||||| |||||||||||||||||||||||||||    
T  338811 catttttcaatatcatatttttatttttatccctttatccaatgccccaagggcaatggtt 338751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 12068229 - 12068161
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggtt 69  Q
    ||||||||||||||||||||||||| ||||||||||||  ||| |||||||| ||  ||| ||||||||    
T  12068229 cttttcaccattttccaatactatatttctatttttatatcctcatccaatgtcctgaggacaatggtt 12068161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 104976 - 104905
Alignment:
Q  9 cattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcct 80  Q
    ||||||| |||| |||| |||||||||||  |||||||||||| ||||||| ||||||||| ||| ||||||    
T  104976 cattttctaatattatatttctatttttactcccttatccaataccccaagagcaatggttagcattctcct 104905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 4962571 - 4962506
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatgg 67  Q
    ||||||| |||||||||||  |||| |||||||||||| || |||||||||| ||||||||||||||    
T  4962571 cttttcatcattttccaatgttatatttctatttttattcc-ttatccaatgtcccaagggcaatgg 4962506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 3639127 - 3639062
Alignment:
Q  4 ttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggtt 69  Q
    ||||||||||||||||  |||| |||||||||||||||||||| ||||| | ||||  ||||||||    
T  3639127 ttcaccattttccaatgttatatttctatttttatccccttattcaatgtctcaagaacaatggtt 3639062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 678504 - 678556
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgc 53  Q
    ||||||||||||||||||||| | |||||||||||| ||| |||| |||||||    
T  678504 cttttcaccattttccaatacaacaattctatttttgtcctcttaaccaatgc 678556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 1479191 - 1479111
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcctt 81  Q
    |||||||  ||||| |||| ||||| |||||||||||||||||||| ||||||| ||||   ||||||| ||| |||||||    
T  1479191 cttttcattatttttcaatgctatatttctatttttatccccttattcaatgcctcaagaataatggttagcattctcctt 1479111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 2e-23; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 29915629 - 29915550
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcctt 81  Q
    |||| ||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  29915629 tttttaccattttccaatactatatttttatttttatccccttatccaacgccccaagggcaatggttagcattctcctt 29915550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 29964782 - 29964703
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcctt 81  Q
    |||| ||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  29964782 tttttaccattttccaatactatatttttatttttatccccttatccaacgccccaagggcaatggttagcattctcctt 29964703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 36730208 - 36730129
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcct 80  Q
    |||||||||||||| |||||||||| || |||||||||||||||||||||||||  ||||||||||||| ||| ||||||    
T  36730208 cttttcaccatttttcaatactatatttatatttttatccccttatccaatgccataagggcaatggttagcattctcct 36730129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 25102377 - 25102295
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcctttt 83  Q
    ||||| ||||||||||||| ||||| ||||||||||||| | |||||||||| |||||||||||||||| ||| |||||||||    
T  25102377 ctttttaccattttccaatgctatatttctatttttatctcattatccaatgtcccaagggcaatggttagcattctcctttt 25102295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 8715556 - 8715479
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcc 79  Q
    ||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||| |||| |||||||| ||| |||||    
T  8715556 cttttcaccattttccaatgctatatttctattttta-ccccttatccaatgccctaaggacaatggttagcattctcc 8715479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 9067443 - 9067366
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcc 79  Q
    ||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||| |||| |||||||| ||| |||||    
T  9067443 cttttcaccattttccaatgctatatttctattttta-ccccttatccaatgccctaaggacaatggttagcattctcc 9067366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 44570441 - 44570363
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcc 79  Q
    |||||||||||||||||||  |||| ||||||||| ||||| ||||| ||||||||||||||||||||| ||| |||||    
T  44570441 cttttcaccattttccaatgttatatttctattttgatccctttatcgaatgccccaagggcaatggttagcattctcc 44570363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 48136776 - 48136698
Alignment:
Q  3 tttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcctt 81  Q
    |||||| |||||||||| ||||| |||||||||||| |||||||||||| |||||||| |||||||| ||| |||||||    
T  48136776 tttcacaattttccaatgctatatttctatttttattcccttatccaataccccaaggacaatggttagcattctcctt 48136698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 35306386 - 35306454
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggtt 69  Q
    ||||||| |||||||||||  |||| |||||||||||||||||||||||||  ||||||||||||||||    
T  35306386 cttttcatcattttccaatgttatatttctatttttatccccttatccaattgcccaagggcaatggtt 35306454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 4759905 - 4759827
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcc 79  Q
    |||||||||||||| |||| ||||| ||||||||||||||| ||||||||||| ||||  ||||||||| ||| |||||    
T  4759905 cttttcaccatttttcaatgctatatttctatttttatccctttatccaatgctccaaatgcaatggttagcattctcc 4759827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 32415623 - 32415705
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcctttt 83  Q
    |||||||| ||||| |||| ||||| ||||||||||||||| |||||||||||| ||||||||||| ||  || |||||||||    
T  32415623 cttttcacaatttttcaatgctatatttctatttttatccctttatccaatgcctcaagggcaatgattaacattctcctttt 32415705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 41346346 - 41346396
Alignment:
Q  19 tactataattctatttttatccccttatccaatgccccaagggcaatggtt 69  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  41346346 tactatatttctatttttatccccttatccaatgccccaaggacaatggtt 41346396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 1803943 - 1804020
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcc 79  Q
    |||| ||| |||| ||||| |||| |||||||||||||||||||||||||||||||||| ||||| || ||| |||||    
T  1803943 tttttaccctttttcaataatatatttctatttttatccccttatccaatgccccaaggacaatgattagcattctcc 1804020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 8847507 - 8847442
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatg 66  Q
    ||||| |||||||||||||  |||| |||||||||||||||||||||||||| |||||| ||||||    
T  8847507 ctttttaccattttccaatgttatatttctatttttatccccttatccaatgtcccaagtgcaatg 8847442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 37509165 - 37509242
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctc 78  Q
    |||||||| |||||||||| ||  | ||| |||||||||||||||||||||||||||| |||||||||| ||| ||||    
T  37509165 cttttcactattttccaatgctgcatttcaatttttatccccttatccaatgccccaaaggcaatggttagcattctc 37509242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 10854914 - 10854982
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatcc----ccttatccaatgccccaagggcaatg 66  Q
    |||||||||||||||||| ||||| ||||| ||||||||    ||||||||||||||||||||||||||    
T  10854914 ttttcaccattttccaatgctatatttctacttttatccatccccttatccaatgccccaagggcaatg 10854982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 44695725 - 44695648
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcc 79  Q
    ||||||||||||||||| | |||| || ||||||||||||||||||||||| ||||| | ||||| || ||| |||||    
T  44695725 ttttcaccattttccaagattatatttatatttttatccccttatccaatgtcccaatgacaatgattagcattctcc 44695648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 46317541 - 46317608
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggtt 69  Q
    |||||| |||||||||||  |||| |||||||||||||  ||||||||||| | ||||||||||||||    
T  46317541 ttttcatcattttccaatgttatatttctatttttatctacttatccaatgtctcaagggcaatggtt 46317608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 51817367 - 51817308
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagg 60  Q
    ||||||||||||||||||| ||||| || ||||||||||| ||||| |||||||| ||||    
T  51817367 cttttcaccattttccaatgctatatttttatttttatcctcttattcaatgcccaaagg 51817308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 45899597 - 45899540
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaag 59  Q
    |||||| ||||||||||||  ||| |||||||||||| | ||||||||||||||||||    
T  45899597 ttttcatcattttccaatataatatttctatttttattctcttatccaatgccccaag 45899540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 52570836 - 52570872
Alignment:
Q  1 cttttcaccattttccaatactataattctattttta 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  52570836 cttttcaccattttccaatactatatttctattttta 52570872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 18842 - 18780
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggca 63  Q
    ||||||||| ||| ||||| | ||| |||||||||||||| |||| ||||||||| |||||||    
T  18842 cttttcaccgtttcccaatgcaatatttctatttttatcctcttaaccaatgccctaagggca 18780  T

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Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 31647356 - 31647416
Alignment:
Q  9 cattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggtt 69  Q
    |||||| |||| ||||| || ||||||||||||||||| ||||| || |||| ||||||||    
T  31647356 catttttcaatgctatatttatatttttatccccttattcaatgtccgaaggacaatggtt 31647416  T

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Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 46055820 - 46055760
Alignment:
Q  9 cattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggtt 69  Q
    |||||||||| || | | |||||||||| | || ||||||||||| |||||||||||||||    
T  46055820 cattttccaacacaaaatttctatttttgttcctttatccaatgctccaagggcaatggtt 46055760  T

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Target: chr6 (Bit Score: 51; Significance: 2e-20; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 29692396 - 29692318
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcc 79  Q
    |||||||||||||| |||||||||| ||||||||||||||  |||||||||||||||||||||||| || ||| |||||    
T  29692396 cttttcaccatttttcaatactatatttctatttttatccatttatccaatgccccaagggcaatgattagcattctcc 29692318  T

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Target: chr6; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 32786270 - 32786347
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcc 79  Q
    |||||||||||||||||||  |||| |||||||||||| |||||||||||| ||||||||||||||||| ||| |||||    
T  32786270 cttttcaccattttccaatgttatatttctatttttat-cccttatccaataccccaagggcaatggttagcattctcc 32786347  T

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Target: chr6; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 10855486 - 10855554
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggtt 69  Q
    ||||||| |||||| ||||| |||| ||||||||||||||||||||| |||||||||||| ||||||||    
T  10855486 cttttcatcatttttcaatattatatttctatttttatccccttatcaaatgccccaaggacaatggtt 10855554  T

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Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 16437644 - 16437562
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcctttta 84  Q
    ||||||||||||||||||  |||| |||||||||||||| |||||||||||||  ||| ||||||||| ||| |||| |||||    
T  16437644 ttttcaccattttccaatgttatatttctatttttatccacttatccaatgccttaagagcaatggttagcattctcttttta 16437562  T

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Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 26572117 - 26572059
Alignment:
Q  21 ctataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctcc 79  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||| ||| |||||    
T  26572117 ctatatttctatttttatccccttatccaatgccccaaggacaatggttagcattctcc 26572059  T

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Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 6866969 - 6867026
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaa 58  Q
    ||||||||||||||| ||| ||||| || |||||||||||||||||||||||||||||    
T  6866969 cttttcaccattttcaaatgctatatttttatttttatccccttatccaatgccccaa 6867026  T

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Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 12191547 - 12191604
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaa 58  Q
    ||||||||||||| ||||| ||||| |||||||||||||| |||||||||||| ||||    
T  12191547 cttttcaccatttaccaatgctatatttctatttttatccacttatccaatgcgccaa 12191604  T

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Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 5578337 - 5578392
Alignment:
Q  10 attttccaatactataattctatttttatccccttatccaatgccccaagggcaat 65  Q
    ||||| |||| ||||| ||||||||||||||||| |||||||||| ||||||||||    
T  5578337 atttttcaatgctatatttctatttttatcccctcatccaatgcctcaagggcaat 5578392  T

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Target: scaffold0062 (Bit Score: 45; Significance: 9e-17; HSPs: 3)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 16825 - 16746
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctccttt 82  Q
    ||||||| |||||| ||| ||||| ||||||||||||||||||||||||||||| | ||||||||||| ||| ||||||||    
T  16825 ttttcactattttc-aatgctatatttctatttttatccccttatccaatgccctatgggcaatggttagcattctccttt 16746  T

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Target: scaffold0062; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 26993 - 26914
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctccttt 82  Q
    ||||||| |||||| ||| ||||| ||||||||||||||||||||||||||||| | ||||||||||| ||| ||||||||    
T  26993 ttttcactattttc-aatgctatatttctatttttatccccttatccaatgccctatgggcaatggttagcattctccttt 26914  T

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Target: scaffold0062; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 37159 - 37080
Alignment:
Q  2 ttttcaccattttccaatactataattctatttttatccccttatccaatgccccaagggcaatggttggcaatctccttt 82  Q
    ||||||| |||||| ||| ||||| ||||||||||||||||||||||||||||| | ||||||||||| ||| ||||||||    
T  37159 ttttcactattttc-aatgctatatttctatttttatccccttatccaatgccctatgggcaatggttagcattctccttt 37080  T

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Target: scaffold0809 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 4325 - 4268
Alignment:
Q  1 cttttcaccattttccaatactataattctatttttatccccttatccaatgccccaa 58  Q
    |||||||| |||||||||| ||||| || ||||||||||||  ||||||||| |||||    
T  4325 cttttcacaattttccaatgctatatttttatttttatccctctatccaatgtcccaa 4268  T

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