View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4810-Insertion-4 (Length: 541)
Name: NF4810-Insertion-4
Description: NF4810
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4810-Insertion-4 |
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Alignment Details
Target: chr7 (Bit Score: 450; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 450; E-Value: 0
Query Start/End: Original strand, 7 - 531
Target Start/End: Complemental strand, 44647504 - 44646979
Alignment:
| Q |
7 |
agaatcaaatagacaatgttataaattattgaatcat---tgtttggcgcatacacatgaactgatgtaaacatttcatttactttaatcatatatacta |
103 |
Q |
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| T |
44647504 |
agaatcaaatagacaatgatataaattattgaatcatcattgtttggcgcatacacatgaactgatgtaaacatttcatttactttaatcatata--cta |
44647407 |
T |
|
| Q |
104 |
acttgaatatcagattatttagaggtatactcccaccatcagatatcatcatctctataaattctggtaaaaaagctccttcaacggagcaatatttttt |
203 |
Q |
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| T |
44647406 |
acttgaatatcagattatttagaggtatactcccaccattaggtatcatcatctctataaattctggtaaaaaagctccttcaacggagcaatatttttt |
44647307 |
T |
|
| Q |
204 |
ccatcattttacaatcactttgagatactctatcttcattattaataccatgatgttcggatcacaacacctagcctaactaannnnnnncctggcaata |
303 |
Q |
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| T |
44647306 |
ccatcattttacaatcactttgagatactctatcttcattattaataccatgatgttcggatcacaacacctagcctaactaatttttttcctggcaata |
44647207 |
T |
|
| Q |
304 |
cctagcctaactaacatgttcttgttaaatgctaacattttcacacaaactgatactataaatagatgtattgttatcaattgggtgatggatttatggt |
403 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
44647206 |
tctagcctaactaacatgttcttgttaaatgctaacattttcacacaaactgatactatgaatagatgtattgttatcaattgggtgatggatttatggt |
44647107 |
T |
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| Q |
404 |
attagtaacccggaaagggaaatatactaacccaatgggatactgcttcaatcgatcctacatcgttcgttatggaaagtgacattcgtgggatcaatta |
503 |
Q |
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| T |
44647106 |
attagtaacccggaaagggaaatatactaacccaatgggatactgcttcaatcgatcctacatcgttcgttatggaaagtgacattcgtgggatcaatta |
44647007 |
T |
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| Q |
504 |
aaagtatcacaggaatttttatcgacca |
531 |
Q |
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| T |
44647006 |
aaagtatcacacgactttttatctacca |
44646979 |
T |
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