View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4811-Insertion-12 (Length: 555)
Name: NF4811-Insertion-12
Description: NF4811
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4811-Insertion-12 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 516; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 516; E-Value: 0
Query Start/End: Original strand, 8 - 555
Target Start/End: Complemental strand, 9659098 - 9658551
Alignment:
| Q |
8 |
caaacaattgtggaaaagatactgaggagtcccacacaaaagtttgattacatacattgttgcagtagaagagtccaaatatcttgctaccatgaaagtt |
107 |
Q |
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| T |
9659098 |
caaacaattgtggaaaagatactgaggagtcccacacaaaagtttgattacatacattgttgcaatagaagagtccaaatatcttgctaccatgaaagtt |
9658999 |
T |
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| Q |
108 |
gaacttcaagcatctttgatggcacatgagcagagaatcaatgaaagaaatgctgaaagaagaaatgatcaagcactgcaggctcacgtcgcaatgaaga |
207 |
Q |
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| T |
9658998 |
gaacttcaagcatctttgatggcacatgagcagagaatcaatgaaagaaatgctgaaagaagaaatgatcaagcactgcaggctcacgtcgcaatgaaga |
9658899 |
T |
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| Q |
208 |
aaaagggtgagaaatggaaaggcaagaaacacaaaggaaaaatgtctcggaacaagactgaaggagcagtaaatttcaagaatcaagatcatgctgaatc |
307 |
Q |
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| T |
9658898 |
aaaagggtgagaaatggaaaggcaagaaacacaaaggaaaaatgtctcggaacaagactgaaggagcagtaaatttcaagaatcaagatcatgctgaatc |
9658799 |
T |
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| Q |
308 |
attatcacaagccaacaagaattaccatttaaagaagaagaactgggataagagtaagatacattgctttaattgcaataagttttgtcattttgctagt |
407 |
Q |
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| T |
9658798 |
attatcacaagccaacaagaattaccattcaaagaagaagaactgggataagagtaagatacattgctttaattgcaataagttttgtcattttgctagc |
9658699 |
T |
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| Q |
408 |
gaatgctatcaaaagaagaatgttcaaaagtgatcaaataatgaagcaaatatggctcaagaaaatgattcagactcgtatagttgctgatggtgacaac |
507 |
Q |
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| T |
9658698 |
gaattctatcaaaagaagaatgttcaaaagtgatcaaataatgaagcaaatatggctcaagaaaatgattcagactcgtatagttgctgatggtgacaac |
9658599 |
T |
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| Q |
508 |
aagctcggaattaggtaattcagatgctcagtatcttgattcaggttc |
555 |
Q |
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| T |
9658598 |
aagctcggaattaggtaattcagatacttggtatcttgactcaggttc |
9658551 |
T |
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