View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4811-Insertion-18 (Length: 983)
Name: NF4811-Insertion-18
Description: NF4811
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4811-Insertion-18 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 886; Significance: 0; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 886; E-Value: 0
Query Start/End: Original strand, 33 - 967
Target Start/End: Original strand, 16841309 - 16842245
Alignment:
| Q |
33 |
atcggagtaagttgctctaaatggggtccttttttattgttttgccttgttttgcccttcacttgttctttgtgctgctgcttactcactttacttcaca |
132 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16841309 |
atcggagtaagttgctctaaatggggtccttttttattgttttgccttgttttgcccttcacttgttctttgtgctgctgcttactcactttacttcaca |
16841408 |
T |
|
| Q |
133 |
cactttgtcattctgcaaccaacatgacagctctgctttgttacatttcaaaaactcattttctgtcaacacttcatctcaacttgatatttgttcctct |
232 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16841409 |
cactttgtcattctgcaaccaacatgacagctctgctttgttacatttcaaaaactcattttctgtcaacacttcatctcaacttgatatttgttcctct |
16841508 |
T |
|
| Q |
233 |
acttctttcaagacaaaatcttggaaaaacggtacggattgttgcaagtgggatggtgtcacgtgtgacactgaatcagattacgtggttggtttggacc |
332 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16841509 |
acttctttcaagacaaaatcttggaaaaacggtacggattgttgcaagtgggatggtgtcacgtgtgacactgaatcagattacgtggttggtttggacc |
16841608 |
T |
|
| Q |
333 |
tcagttgcaacaatttgaaaggtgaattacatcccaatagcactatcctccagttaagacaccttcaacaactcaacttggcttttaataatttttctgg |
432 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16841609 |
tcagttgcaacaatttgaaaggtgaattacatcccaatagcactatcctccagttaagacaccttcaacaactcaacttggcttttaataatttttctgg |
16841708 |
T |
|
| Q |
433 |
gtcttcaatgcctattggtattagcgatttagtgaatatcacacatctaaatctatcatactgtgacctcaatggtgacattcactccacaatctctcat |
532 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16841709 |
gtcttcaatgcctattggtattagcgatttagtgaatatcacacatctaaatctatcatactgtgacctcaatggtgacattcactccacaatctctcat |
16841808 |
T |
|
| Q |
533 |
ttgtcaaaattagtatctcttgatcttagcggttactcgtacgaaaaagtgggattgaaactcaattcgttcacttggaagaaactcattcataatgcta |
632 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16841809 |
ttgtcaaaattagtatctcttgatcttagcggttactcgtacgaaaaagtgggattgaaactcaattcgttcacttggaagaaactcattcataatgcta |
16841908 |
T |
|
| Q |
633 |
ctaaattaagggatctttatctaaatggagtgaacatgtcttcaatcggagagagctctttgtcaaatgctaaacaatttgtcatcctctttggtttctc |
732 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
16841909 |
ctaaattaagggatctttatctaaatggagtgaacatgtcttcaattggagagagctctttgtc-aatgctaaacaatttgtcatcctctttggtttctc |
16842007 |
T |
|
| Q |
733 |
ttcatctagcaaacactggtttgcaaggaaatttgtt-agtggcatactctctttgtcaaatcctcaaagactagatttgtcacataatcaagaccttag |
831 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
16842008 |
ttcatctagcaaacactggtttgcaaggaaatttgttaagtgacatactctctttgtcaaatcttcaaagactagatttgtcacataatcaagaccttag |
16842107 |
T |
|
| Q |
832 |
tggtcaacttccaaaatccaattggagcactcctctaa-gtacttgtacctctctcatactgctttctcaggag-aatctcctattccataggtccatta |
929 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
16842108 |
tggtcaacttccaaaatccaactggagcactcctctaaggtacttgtacctctctcatactgctttctcaggagaaatctcctattccataggtcaatta |
16842207 |
T |
|
| Q |
930 |
aagtctcttactcatttagtcctttcattttgcaattt |
967 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16842208 |
aagtctcttactcatttagtcctttcattttgcaattt |
16842245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 47 - 885
Target Start/End: Original strand, 24216181 - 24217026
Alignment:
| Q |
47 |
ctctaaatggggtccttttttattgttttgccttgttttgcccttcacttgttctttgtgctgctgcttactcactttacttcacacactttgtcattct |
146 |
Q |
| |
|
||||| ||||| |||||||||||| | ||||| ||| || ||||||||||| | || || |||||||||| |||||||| |||||| ||||||| |
|
|
| T |
24216181 |
ctctatatgggttccttttttattctaatgcctcatttgacctttcacttgttcatgttgttgttgcttactcattttacttcttacacttactcattct |
24216280 |
T |
|
| Q |
147 |
gcaaccaacatgacagctctgctttgttacatttcaaaaactcattttctgtcaacacttcatctcaacttgatatttg---------ttcctctacttc |
237 |
Q |
| |
|
||||||| |||||||| ||||| |||||||| ||||| ||||||||| |||||||||||||||| ||| |||||||| |||| || || |
|
|
| T |
24216281 |
gcaaccatcatgacagttctgcattgttacaattcaagaactcatttgttgtcaacacttcatctgaacccgatatttggtctatgtgttccacttttta |
24216380 |
T |
|
| Q |
238 |
tttcaagacaaaatcttggaaaaacggtacggattgttgcaagtgggatggtgtcacgtgtgacactgaatcagattacgtggttggtttggacctcagt |
337 |
Q |
| |
|
||||| ||| |||| |||||||| ||| | ||||||||| |||||||||| |||| |||||||||| ||| |||||||| ||||| ||||||| ||| |
|
|
| T |
24216381 |
tttcaggacggaatcctggaaaaatggtgcagattgttgcgagtgggatggggtcatgtgtgacactaggtcaaattacgtgattggtctggaccttagt |
24216480 |
T |
|
| Q |
338 |
tgcaacaatttgaaaggtgaattacatcccaatagcactatcctccagttaagacaccttcaacaactcaacttggcttttaataatttttctgggtctt |
437 |
Q |
| |
|
||||||||| |||||||||| |||||||| ||| |||||||| || || | |||||||||||||||||||||||||| ||||||||||||||| |||||| |
|
|
| T |
24216481 |
tgcaacaatctgaaaggtgagttacatccaaattgcactatcttcaagcttagacaccttcaacaactcaacttggcctttaataatttttcttggtctt |
24216580 |
T |
|
| Q |
438 |
caatgcctattggtattagcgatttagtgaatatcacacatctaaatctatcatactgtgacctcaatggtgacattcactccacaatctctcatttgtc |
537 |
Q |
| |
|
|||||| | |||| ||| | ||| |||||||| ||||| |||||||| ||||| |||| |||| | |||| | |||| ||||||||||||||| ||||| |
|
|
| T |
24216581 |
caatgcatgttgggattggtgatctagtgaatctcacatatctaaatttatcaagctgttaccttactggtaatattccctccacaatctctcagttgtc |
24216680 |
T |
|
| Q |
538 |
aaaattagtatctcttgatctt---agcggttactcgtacgaaaaagtgggattgaaactcaattcgttcacttggaagaaactcattcataatgctact |
634 |
Q |
| |
|
|||| |||| || ||||||||| || ||||| | | || | | ||||||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
24216681 |
aaaactagtgtcacttgatcttaaaagttattactggccggtggaacaaaaactcaaactcaatatcttcacatggaagaaactcattcataatgctact |
24216780 |
T |
|
| Q |
635 |
aaattaagggatctttatctaaatggagtgaacatgtcttcaatcggagagagctctttgtcaaatgctaaacaatttgtcatcctctttggtttctctt |
734 |
Q |
| |
|
|| |||||||| ||||| || ||||||||| |||| ||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||| |
|
|
| T |
24216781 |
aatttaagggagctttacctgaatggagtggacatatcttcaatcagagagagctctt-------tgctaaagaatttgtcatcctctttggtttctctt |
24216873 |
T |
|
| Q |
735 |
catctagcaaacactggtttgcaaggaaatttgt-tagtggcatactctctttgtcaaatcctcaaagactagatttgtcacataatcaagaccttagtg |
833 |
Q |
| |
|
||||||| |||||| |||||||||||| ||| |||| ||| |||||||| |||||| ||||| ||||||||||||| |||||||||||| ||| |
|
|
| T |
24216874 |
agtctagcatccactggattgcaaggaaatatgtcaagtgacatcctctctttaccaaatcttcaaaaactagatttgtcatcgaatcaagaccttcgtg |
24216973 |
T |
|
| Q |
834 |
gtcaacttccaaaatccaattggagcactcctctaa-gtacttgtacctctct |
885 |
Q |
| |
|
|| || |||||| ||||| ||||||||||| |||| ||||||| |||||||| |
|
|
| T |
24216974 |
gtaaatttccaacgtccaactggagcactcccctaaggtacttggacctctct |
24217026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 458; Significance: 0; HSPs: 18)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 458; E-Value: 0
Query Start/End: Original strand, 33 - 942
Target Start/End: Complemental strand, 37698523 - 37697603
Alignment:
| Q |
33 |
atcggagtaagttgctctaaatggggtccttttttattgttttgccttgttttgcccttcacttgttctttgtgctgctgcttactcactttacttcaca |
132 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||| | ||||||| ||||||| ||||||| ||||| || || |||||||||| |||||||| | |
|
|
| T |
37698523 |
atcggtgtaagttgctctaaatggggtccttttttattctattgccttattttgcctttcactttttcttgttgttgttgcttactcattttacttccta |
37698424 |
T |
|
| Q |
133 |
cactttgtcattctgcaaccaacatgacagctctgctttgttacatttcaaaaactcattttctgtcaacacttcatctcaacttgatatttg------- |
225 |
Q |
| |
|
||| | ||||| |||||||| |||||||| ||||| |||||||| ||||||||||||||||| || |||||||| ||||||| ||||||||| |
|
|
| T |
37698423 |
cacactctcattatgcaaccatcatgacagttctgccttgttacaattcaaaaactcattttcagttaacacttcgtctcaacctgatatttggtctaga |
37698324 |
T |
|
| Q |
226 |
--ttcctctacttctttcaagacaaaatcttggaaaaacggtacggattgttgcaagtgggatggtgtcacgtgtgacactgaatcagattacgtggttg |
323 |
Q |
| |
|
||||||| ||||| || |||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| || ||||||||| ||| |
|
|
| T |
37698323 |
tgttcctctttttcttccaggacagaatcttggaaaaacaatacagattgttgcaagtgggatggtgtcacgtgtgacactgagtcggattacgtgattg |
37698224 |
T |
|
| Q |
324 |
gtttggacctcagttgcaacaatttgaaaggtgaattacatcccaatagcactatcctccagttaagacaccttcaacaactcaacttggcttttaataa |
423 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||| |||||||||||| || |||||||||||||| |
|
|
| T |
37698223 |
gtttggacctcagttgcaacaatttgaaaggtgaattacatcccaatagcactatcttccagcttagacgccttcaacaacttaatttggcttttaataa |
37698124 |
T |
|
| Q |
424 |
tttttctgggtcttcaatgcctattggtattagcgatttagtgaatatcacacatctaaatctatcatactgtgacctcaatggtgacattcactccaca |
523 |
Q |
| |
|
||||||| |||||||||| ||||||||| | | ||||||||||| |||||||||||||||||||| | ||| ||||||||||| | |||| |||||| |
|
|
| T |
37698123 |
tttttcttggtcttcaatacctattggtgtcggagatttagtgaaactcacacatctaaatctatcaaattgttacctcaatggtaatattccttccaca |
37698024 |
T |
|
| Q |
524 |
atctctcatttgtcaaaattagtatctcttgatcttagcggttactcgtacgaaaaagtgggattgaaactcaattcgttcacttggaagaaactcattc |
623 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||| |||||| ||||||| |||||||||||||||||||||| |||| ||||||||||||||||| |
|
|
| T |
37698023 |
atctctcatttgtcaaaattagtatcacttgatcttagcagttactggtacgaacaagtgggattgaaactcaattcattcatttggaagaaactcattc |
37697924 |
T |
|
| Q |
624 |
ataatgctactaaattaagggatctttatctaaatggagtgaacatgtcttcaatcggagagagctctttgtcaaatgctaaacaatttgtcatcctctt |
723 |
Q |
| |
|
||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||| |
|
|
| T |
37697923 |
ataatgctactaatttaagggatcttcatcttaatggagtgaacatgtcttcaatcggagagagctcattgtc-aatgctaaagaatttgtcatcctctt |
37697825 |
T |
|
| Q |
724 |
tggtttctcttcatctagcaaacactggtttgcaaggaaatttgt-tagtggcatactctctttgtcaaatcctcaaagactagatttgtcacataatca |
822 |
Q |
| |
|
||||||||||| |||| |||||||| |||||||||||| | | |||| ||| |||||||| | |||| ||||||| | ||||||||| |||||| |
|
|
| T |
37697824 |
tggtttctcttagtctacgaaacactgtgttgcaaggaaatatatcaagtgacatcctctctttacctaatcttcaaagattggatttgtcatttaatca |
37697725 |
T |
|
| Q |
823 |
agaccttagtggtcaacttccaaaatccaattggagcactcctctaa-gtacttgtacctctctcatactgctttctcaggagaatctcc-tattccata |
920 |
Q |
| |
|
| |||||||||||||||||||||| ||||| |||||||||||||||| |||||| |||||||| | |||||||||||||| ||| ||| ||||||||| |
|
|
| T |
37697724 |
aaaccttagtggtcaacttccaaagtccaactggagcactcctctaaggtacttagacctctcttacactgctttctcaggtgaaattccttattccata |
37697625 |
T |
|
| Q |
921 |
ggtccattaaagtctcttactc |
942 |
Q |
| |
|
|||| ||| |||| |||||||| |
|
|
| T |
37697624 |
ggtcaattgaagtatcttactc |
37697603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 395; E-Value: 0
Query Start/End: Original strand, 39 - 980
Target Start/End: Complemental strand, 37534824 - 37533877
Alignment:
| Q |
39 |
gtaagttgctctaaatggggtccttttttattgttttgccttgttttgcccttcacttgttctttgtgctgctgcttactcactttacttcacacacttt |
138 |
Q |
| |
|
||||||| ||||||||||| |||||||||||| ||||||| |||| || ||||||| ||||| || || || ||||||| |||||||| ||||||| |
|
|
| T |
37534824 |
gtaagtttctctaaatgggatccttttttattccattgccttattttacctttcactttttcttgttgttgttgattactcattttacttcctacacttt |
37534725 |
T |
|
| Q |
139 |
gtcattctgcaaccaacatgacagctctgctttgttacatttcaaaaactcattttctgtcaacacttcatctcaacttgatattt---gttcctctact |
235 |
Q |
| |
|
||| | |||||| ||||||||| |||||| |||||||| ||||||||||| |||||||||| ||||||||||||||| || || |||| ||| | |
|
|
| T |
37534724 |
ctcactgtgcaacaaacatgacaactctgccttgttacaattcaaaaactctttttctgtcagcacttcatctcaactctattttgcgcgttcttctttt |
37534625 |
T |
|
| Q |
236 |
tctttcaagacaaaatcttggaaaaacggtacggattgttgcaagtgggatggtgtcacgtgtgacactgaatcagattacgtggttggtttggacctca |
335 |
Q |
| |
|
|||||||||||| |||||||| ||||| |||| |||||||| ||||||||||||||||||| ||||| |||||| ||||| ||||| ||||||||| |
|
|
| T |
37534624 |
tctttcaagacagaatcttgggaaaacagtacagattgttgtgagtgggatggtgtcacgtgcgacaccatgtcagatcacgtgattggtctggacctca |
37534525 |
T |
|
| Q |
336 |
gttgcaacaatttgaaaggtgaattacatcccaatagcactatcctccagttaagacaccttcaacaactcaacttggcttttaataatttttctgggtc |
435 |
Q |
| |
|
||||||||||| | |||||||||||||||||||||||||| ||| | ||| | | ||||||||||||||||||||||||||||||| |||||||| |||| |
|
|
| T |
37534524 |
gttgcaacaatctaaaaggtgaattacatcccaatagcaccatctttcagcttaaacaccttcaacaactcaacttggcttttaatcatttttcttggtc |
37534425 |
T |
|
| Q |
436 |
ttcaatgcctattggtattagcgatttagtgaatatcacacatctaaatctatcatactgtgacctcaatggtgacattcactccacaatctctcatttg |
535 |
Q |
| |
|
|||||| ||||||||| || | ||||||||||| |||||||||||||||||||||||| |||||||| |||| | |||| |||||||||||||||||| |
|
|
| T |
37534424 |
ttcaatacctattggtgttggagatttagtgaaactcacacatctaaatctatcatactctgacctcagtggtaatattccttccacaatctctcatttg |
37534325 |
T |
|
| Q |
536 |
tcaaaattagtatctcttgatcttagcggttactcgtacgaaaaagtgggattgaaactcaattcgttcacttggaagaaactcattcataatgctacta |
635 |
Q |
| |
|
|||||||||||||| |||||||||||| |||||| || || | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
37534324 |
tcaaaattagtatcacttgatcttagcagttactggtccgcagaagtgggattgaaactcaattcgttcatttggaagaaactcattcataatgctacta |
37534225 |
T |
|
| Q |
636 |
aattaagggatctttatctaaatggagtgaacatgtcttcaatcggagagagctctttgtcaaatgctaaacaatttgtcatcctctttggtttctcttc |
735 |
Q |
| |
|
| |||||||| |||||| | || |||||||||||||| ||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
37534224 |
atttaagggaactttatttggataatgtgaacatgtcttccatcagagagagctctttgtc-aatgctaaagaatttgtcatcctctttggtttctctta |
37534126 |
T |
|
| Q |
736 |
atctagcaaacactggtttgcaaggaaatttgt-tagtggcatactctctttgtcaaatcctcaaagactagatttgtcacataatcaagaccttagtgg |
834 |
Q |
| |
|
|||| || | |||| |||||||||||||||| |||| ||| |||||||| | |||| ||||||| | ||||||||| |||| | |||||||||| |
|
|
| T |
37534125 |
gtctatcagaaactgagttgcaaggaaatttgtcaagtgacatcctctctttacctaatcttcaaagattggatttgtcatctaatgataaccttagtgg |
37534026 |
T |
|
| Q |
835 |
tcaacttccaaaatccaattggagcactcctctaa-gtacttgtacctctctcatactgctttctcaggagaatctcc-tattccataggtccattaaag |
932 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||||| ||||||| ||||||| ||||||| ||||| ||| ||| ||||||||||||| ||| ||| |
|
|
| T |
37534025 |
tcaacttccaaagtccaactggagcactcctctaaggtacttggtcctctctttctctgctttttcaggtgaaattccttattccataggtcaattgaag |
37533926 |
T |
|
| Q |
933 |
tctcttactcatttagtcctttcattttgcaa-tttgacggaatggttc |
980 |
Q |
| |
|
||||||||||| |||||||||||||| ||||| ||||| |||||||||| |
|
|
| T |
37533925 |
tctcttactcaattagtcctttcattctgcaattttgatggaatggttc |
37533877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 362; E-Value: 0
Query Start/End: Original strand, 40 - 967
Target Start/End: Complemental strand, 37641604 - 37640663
Alignment:
| Q |
40 |
taagttgctctaaatggggtccttttttattgttttgccttgttttgcccttcacttgttctttgtgctgctgcttactcactttacttcacacactttg |
139 |
Q |
| |
|
|||||| ||||||||||| |||||||||||| ||||||| |||| || ||||||| || || || || || ||||||| |||||||| ||||||| |
|
|
| T |
37641604 |
taagtttctctaaatgggatccttttttattccattgccttattttacctttcacttcttgttgttgttgttgattactcattttacttcctacactttc |
37641505 |
T |
|
| Q |
140 |
tcattctgcaaccaacatgacagctctgctttgttacatttcaaaaactcattttctgtcaacacttcatctcaacttga------------tatttgtt |
227 |
Q |
| |
|
||| | |||||||||||||||| |||||| |||||||| ||||||||||| ||||||||||||||||||||| ||| || || |||| |
|
|
| T |
37641504 |
tcactgtgcaaccaacatgacacctctgccttgttacaattcaaaaactctttttctgtcaacacttcatctaaaccggacgatattttgtctagttgtc |
37641405 |
T |
|
| Q |
228 |
cctctacttctttcaagacaaaatcttggaaaaacggtacggattgttgcaagtgggatggtgtcacgtgtgacactgaatcagattacgtggttggttt |
327 |
Q |
| |
|
||||| ||||||||||||| |||||||||||||| ||| |||||||| ||||||||||||||||||| ||||| |||||| ||||| ||||| | |
|
|
| T |
37641404 |
cctctttttctttcaagacagaatcttggaaaaacaatacagattgttgtgagtgggatggtgtcacgtgcgacaccatgtcagatcacgtgattggtct |
37641305 |
T |
|
| Q |
328 |
ggacctcagttgcaacaatttgaaaggtgaattacatcccaatagcactatcctccagttaagacaccttcaacaactcaacttggcttttaataatttt |
427 |
Q |
| |
|
||||||||||||||||||| | |||||||||||||||||||||||||| ||| | ||| | | ||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
37641304 |
ggacctcagttgcaacaatctaaaaggtgaattacatcccaatagcaccatctttcagcttaaacaccttcaccaactcaacttggcttttaataatttt |
37641205 |
T |
|
| Q |
428 |
tctgggtcttcaatgcctattggtattagcgatttagtgaatatcacacatctaaatctatcatactgtgacctcaatggtgacattcactccacaatct |
527 |
Q |
| |
|
||| ||||||||||||||||||| || | ||||||||||| |||||||||||||||||||| | ||| ||||||||||| | |||| |||||||||| |
|
|
| T |
37641204 |
tctttgtcttcaatgcctattggtgttggagatttagtgaaactcacacatctaaatctatcaaaatgttacctcaatggtaatattccttccacaatct |
37641105 |
T |
|
| Q |
528 |
ctcatttgtcaaaattagtatctcttgatcttagcggttactcgtacgaaaaagtgggattgaaactcaattcgttcacttggaagaaactcattcataa |
627 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||| |||||| || |||| |||||||||||||||||||||| |||| ||||||||||||||||||||| |
|
|
| T |
37641104 |
ctcatttgtcaaaattagtatcacttgatcttagcagttactggtccgaacaagtgggattgaaactcaattcattcatttggaagaaactcattcataa |
37641005 |
T |
|
| Q |
628 |
tgctactaaattaagggatctttatctaaatggagtgaacatgtcttcaatcggagagagctctttgtcaaatgctaaacaatttgtcatcctctttggt |
727 |
Q |
| |
|
||||||||| |||||||| ||| || | ||| | ||| | |||||||| || |||||||||||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
37641004 |
tgctactaatttaagggagcttcatttgaatagtgtggatatgtcttccattacggagagctctttgtc-aatgctaaagaatttgtcatcctctttggt |
37640906 |
T |
|
| Q |
728 |
ttctcttcatctagcaaacactggtttgcaaggaaatttgt-tagtggcatactctctttgtcaaatcctcaaagactagatttgtcacataatcaagac |
826 |
Q |
| |
|
||||||| |||| ||| |||| |||||||||||||||| |||| ||| |||||||| | |||| ||||||| | ||||||||| ||||||| || |
|
|
| T |
37640905 |
ttctcttagtctacgaaaaactgagttgcaaggaaatttgtcaagtgacatcctctctttacctaatcttcaaagattggatttgtcatttaatcaaaac |
37640806 |
T |
|
| Q |
827 |
cttagtggtcaacttccaaaatccaattggagcactcctctaa-gtacttgtacctctctcatactgctttctcaggagaatctcc-tattccataggtc |
924 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||||||||||||| ||||||| ||||| | ||||||||||||| ||| ||| ||||||||||||| |
|
|
| T |
37640805 |
cttagtggtcaacttccaaagtccaactggagcactcctctaaggtacttgaacctccgtttatctgctttctcaggtgaaattccttattccataggtc |
37640706 |
T |
|
| Q |
925 |
cattaaagtctcttactcatttagtcctttcattttgcaattt |
967 |
Q |
| |
|
||| |||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
37640705 |
aattgaagtctcttactcaattagtcctttcagattgcaattt |
37640663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 47 - 942
Target Start/End: Complemental strand, 37596049 - 37595140
Alignment:
| Q |
47 |
ctctaaatggggtccttttttattgttttgccttgttttgcccttcacttgttctt--tgt-gctgctgcttactcactttacttcacacactttgtcat |
143 |
Q |
| |
|
||||||||||| |||||||||||| ||||||| |||| || ||||||| ||||| ||| | ||||||||||||| |||||||| ||||||| |||| |
|
|
| T |
37596049 |
ctctaaatgggatccttttttattccattgccttattttacctttcactttttcttgttgttgttgctgcttactcattttacttcctacactttctcat |
37595950 |
T |
|
| Q |
144 |
tctgcaaccaacatgacagctctgctttgttacatttcaaaaactcattttctgtcaacacttcatctcaacttgatat---------ttgttcctctac |
234 |
Q |
| |
|
| |||||| ||||||||| |||||| |||||||| ||||||||||| ||||||||||||||||||||||||| || |||||||||| |
|
|
| T |
37595949 |
tgtgcaacaaacatgacaactctgccttgttacaattcaaaaactctttttctgtcaacacttcatctcaacccaatccgtactttggttgttcctcttt |
37595850 |
T |
|
| Q |
235 |
ttctttcaagacaaaatcttggaaaaacggtacggattgttgcaagtgggatggtgtcacgtgtgacactgaatcagattacgtggttggtttggacctc |
334 |
Q |
| |
|
||||||||||||| |||||||| ||||| |||| |||||||| ||||||||||||||||||| ||||| |||||| ||||| ||||| |||||||| |
|
|
| T |
37595849 |
ttctttcaagacagaatcttgggaaaacagtacagattgttgtgagtgggatggtgtcacgtgcgacaccatgtcagatcacgtgattggtctggacctc |
37595750 |
T |
|
| Q |
335 |
agttgcaacaatttgaaaggtgaattacatcccaatagcactatcctccagttaagacaccttcaacaactcaacttggcttttaataatttttctgggt |
434 |
Q |
| |
|
|||||||||||| | |||||||||||||||||||||||||| ||| | ||| | | ||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
37595749 |
agttgcaacaatcttaaaggtgaattacatcccaatagcaccatctttcagcttaaacaccttcaacaactcaacttggcttttaataatttttctgagt |
37595650 |
T |
|
| Q |
435 |
cttcaatgcctattggtattagcgatttagtgaatatcacacatctaaatctatcatactgtgacctcaatggtgacattcactccacaatctctcattt |
534 |
Q |
| |
|
||||||||||||||||| || | ||||||||||| |||||||||||||||||||||| ||| |||||| |||| | |||| ||||||||||||||||| |
|
|
| T |
37595649 |
cttcaatgcctattggtgttggagatttagtgaaactcacacatctaaatctatcatattgttacctcagtggtaatattccttccacaatctctcattt |
37595550 |
T |
|
| Q |
535 |
gtcaaaattagtatctcttgatcttagcggttactcgtacgaaaaagtgggattgaaactcaattcgttcacttggaagaaactcattcataatgctact |
634 |
Q |
| |
|
||||||||||||||| |||||||||||| |||||| || |||| ||||||||||||||||||| || |||| |||||||||||||||||||||||||||| |
|
|
| T |
37595549 |
gtcaaaattagtatcacttgatcttagcagttactggtccgaagaagtgggattgaaactcaagtcattcatttggaagaaactcattcataatgctact |
37595450 |
T |
|
| Q |
635 |
aaattaagggatctttatctaaatggagtgaacatgtcttcaatcggagagagctctttgtcaaatgctaaacaatttgtcatcctctttggtttctctt |
734 |
Q |
| |
|
|| |||||||| ||| || | ||| | ||| | |||||||| || |||||||||||||| |||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
37595449 |
aatttaagggagcttcatttgaatagtgtggatatgtcttccattacggagagctctttgtc-catgctaaagaatttttcatcctctttggtttctctt |
37595351 |
T |
|
| Q |
735 |
catctagcaaacactggtttgcaaggaaatttgt-tagtggcatactctctttgtcaaatcctcaaagactagatttgtcacataatcaagaccttagtg |
833 |
Q |
| |
|
| |||| ||||||||| |||||||||||||||| |||| ||| |||||||| | |||| ||||||| | ||||||||| |||| | ||||||||| |
|
|
| T |
37595350 |
cttctacgaaacactgggttgcaaggaaatttgtcaagtgacatcctctctttacctaatcttcaaagattggatttgtcatttaatgataaccttagtg |
37595251 |
T |
|
| Q |
834 |
gtcaacttccaaaatccaattggagcactcctctaa-gtacttgtacctctctcatactgctttctcaggagaatctcc-tattccataggtccattaaa |
931 |
Q |
| |
|
||||||||||||| ||||| | |||||||||||||| ||||||| ||||| | ||||||| ||||| ||| ||| ||||||||||||| ||| || |
|
|
| T |
37595250 |
gtcaacttccaaagtccaacttgagcactcctctaaggtacttgaacctccgtttatctgctttttcaggtgaaattccttattccataggtcaattgaa |
37595151 |
T |
|
| Q |
932 |
gtctcttactc |
942 |
Q |
| |
|
|| |||||||| |
|
|
| T |
37595150 |
gtatcttactc |
37595140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 33 - 967
Target Start/End: Complemental strand, 37437431 - 37436498
Alignment:
| Q |
33 |
atcggagtaagttgctctaaatggggtccttttttattgttttgccttgttttgcccttcacttgttctttgtgctgctgcttactcactttacttcaca |
132 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || || ||||||||||||||||| | || |
|
|
| T |
37437431 |
atcggtgtaagttgctctaaatggggtccttttttattcttttgccttgttttgcccttcacttgttctcgttgttgttgcttactcactttactaccca |
37437332 |
T |
|
| Q |
133 |
cactttgtcattctgcaaccaacatgacagctctgctttgttacatttcaaaaactcattttctgtcaacacttcatctcaacttgatat---------t |
223 |
Q |
| |
|
|||||| ||||| |||||||| ||||||| |||||| || ||||| ||||||||||| ||| | |||||||||||||||||| || | |
|
|
| T |
37437331 |
cactttctcattatgcaaccatcatgacacctctgccttattacaattcaaaaactcttttcttctcaacacttcatctcaacccaatccgtactttggt |
37437232 |
T |
|
| Q |
224 |
tgttcctctacttctttcaagacaaaatcttggaaaaacggtacggattgttgcaagtgggatggtgtcacgtgtgacactgaatcagattacgtggttg |
323 |
Q |
| |
|
|||| |||| ||||||||||||| |||||||| ||||| |||| |||||||| ||||||||||||||||||| ||||| |||||| ||||| ||| |
|
|
| T |
37437231 |
tgtttctctttttctttcaagacagaatcttgggaaaacagtacagattgttgtgagtgggatggtgtcacgtgcgacaccatgtcagatcacgtgattg |
37437132 |
T |
|
| Q |
324 |
gtttggacctcagttgcaacaatttgaaaggtgaattacatcccaatagcactatcctccagttaagacaccttcaacaactcaacttggcttttaataa |
423 |
Q |
| |
|
|| |||||||||||||||||||| |||||||||||||||||||||||||||| ||| | ||| | | ||||||||||||||||||||||||||||||| | |
|
|
| T |
37437131 |
gtctggacctcagttgcaacaatctgaaaggtgaattacatcccaatagcaccatctttcagcttaaacaccttcaacaactcaacttggcttttaatca |
37437032 |
T |
|
| Q |
424 |
tttttctgggtcttcaatgcctattggtattagcgatttagtgaatatcacacatctaaatctatcatactgtgacctcaatggtgacattcactccaca |
523 |
Q |
| |
|
|||||||| ||||||||| |||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||| |||| | |||| |||| | |
|
|
| T |
37437031 |
tttttctgagtcttcaatacctattggtattagtgatttagtgaaactcacacatctaaacctatcatactgtgacctcagtggtaatattccttccaaa |
37436932 |
T |
|
| Q |
524 |
atctctcatttgtcaaaattagtatctcttgatcttagcggttactcgtacgaaaaagtgggattgaaactcaattcgttcacttggaagaaactcattc |
623 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||| | ||| | | | ||| |||||||| | ||| | |||||||||||||||| |
|
|
| T |
37436931 |
atctctcatttgtcaaaattagtatcccttgatcttaacaatta-tgattc-----------tttggaactcaatccattcgcatggaagaaactcattc |
37436844 |
T |
|
| Q |
624 |
ataatgctactaaattaagggatctttatctaaatggagtgaacatgtcttcaatcggagagagctctttgtcaaatgctaaacaatttgtcatcctctt |
723 |
Q |
| |
|
||||||||||||| |||||||| ||| |||| ||||||||||| ||||||||||| ||||||||||||||||| || ||| ||||||||||| |||| |
|
|
| T |
37436843 |
ataatgctactaatttaagggagcttcatctgaatggagtgaaaatgtcttcaattggagagagctctttgtc-gttgttaacgaatttgtcatcttctt |
37436745 |
T |
|
| Q |
724 |
tggtttctcttcatctagcaaacactggtttgcaaggaaatttgt-tagtggcatactctctttgtcaaatcctcaaagactagatttgtcacataatca |
822 |
Q |
| |
|
||||||||||| ||||||| |||| |||||||||||||||| |||| ||| |||||||| | |||| ||||||| | ||||||||| |||||| |
|
|
| T |
37436744 |
tggtttctcttagtctagcatccactcagttgcaaggaaatttgtcaagtgacatcctctctttacctaatcttcaaagattggatttgtcatttaatca |
37436645 |
T |
|
| Q |
823 |
agaccttagtggtcaacttccaaaatccaattggagcactcctctaa-gtacttgtacctctctcatactgctttctcaggagaatctcc-tattccata |
920 |
Q |
| |
|
| |||||||||||||||||||||| ||||| |||||||||||||||| ||||||| ||||| | ||||||||||||| ||| ||| ||||||||| |
|
|
| T |
37436644 |
aaaccttagtggtcaacttccaaagtccaactggagcactcctctaaggtacttgaacctccgtttatctgctttctcaggtgaaattccttattccata |
37436545 |
T |
|
| Q |
921 |
ggtccattaaagtctcttactcatttagtcctttcattttgcaattt |
967 |
Q |
| |
|
|||| ||| |||||||||||||| |||| ||||| | ||||||||| |
|
|
| T |
37436544 |
ggtcaattgaagtctcttactcaattagaccttttaggttgcaattt |
37436498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 334; E-Value: 0
Query Start/End: Original strand, 39 - 967
Target Start/End: Complemental strand, 37713348 - 37712415
Alignment:
| Q |
39 |
gtaagttgctctaaatggggtccttttttattgttttgccttgttttgcccttcacttgttctttgtgctgctgcttactcactttacttcacacacttt |
138 |
Q |
| |
|
||||||| ||||||||||| |||||||||||| ||||||| |||| || ||||||| |||| || || |||||||||| |||||||| |||||||| |
|
|
| T |
37713348 |
gtaagtttctctaaatgggatccttttttattccattgccttattttacctttcacttcttctcgttgttgttgcttactcattttacttcccacacttt |
37713249 |
T |
|
| Q |
139 |
gtcattctgcaaccaacatgacagctctgctttgttacatttcaaaaactcattttctgtcaacacttcatctcaacttgatat---------ttgttcc |
229 |
Q |
| |
|
||| | |||||| ||||||||| |||||| |||||||| ||||||||||| ||||||||||||||||||||||||| || ||||||| |
|
|
| T |
37713248 |
ctcactgtgcaacaaacatgacaactctgccttgttacaattcaaaaactctttttctgtcaacacttcatctcaacccaatccgtactttggttgttcc |
37713149 |
T |
|
| Q |
230 |
tctacttctttcaagacaaaatcttggaaaaacggtacggattgttgcaagtgggatggtgtcacgtgtgacactgaatcagattacgtggttggtttgg |
329 |
Q |
| |
|
||| ||||||||||||| |||||||| ||||| |||| |||||||| ||||||||||||||||||| ||||| |||||| ||||| ||||| ||| |
|
|
| T |
37713148 |
tctttttctttcaagacagaatcttggcaaaacagtacagattgttgtgagtgggatggtgtcacgtgcgacaccatgtcagatcacgtgattggtctgg |
37713049 |
T |
|
| Q |
330 |
acctcagttgcaacaatttgaaaggtgaattacatcccaatagcactatcctccagttaagacaccttcaacaactcaacttggcttttaataatttttc |
429 |
Q |
| |
|
||||||||||||||||| | |||||||||||||||||||||||||| ||| | ||| | | ||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
37713048 |
acctcagttgcaacaatctaaaaggtgaattacatcccaatagcaccatctttcagcttaaacaccttcaacaactcaacttggcttttaatcatttttc |
37712949 |
T |
|
| Q |
430 |
tgggtcttcaatgcctattggtattagcgatttagtgaatatcacacatctaaatctatcatactgtgacctcaatggtgacattcactccacaatctct |
529 |
Q |
| |
|
| |||||||||||||||||||| || | ||||||||||| |||||||||||||||||||| | ||| ||||||||||| | |||| |||||||||||| |
|
|
| T |
37712948 |
ttggtcttcaatgcctattggtgttggagatttagtgaaactcacacatctaaatctatcaaattgttacctcaatggtaatattccttccacaatctct |
37712849 |
T |
|
| Q |
530 |
catttgtcaaaattagtatctcttgatcttagcggttactcgtacgaaaaagtgggattgaaactcaattcgttcacttggaagaaactcattcataatg |
629 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| || | | | |||| ||||||||| ||| | || || |||||||||||||||||||||| |
|
|
| T |
37712848 |
catttgtcaaaattagtatcacttgatcttagcagt------tttggggatgtggaattgaaactaaatccattgacatggaagaaactcattcataatg |
37712755 |
T |
|
| Q |
630 |
ctactaaattaagggatctttatctaaatggagtgaacatgtcttcaatcggagagagctctttgtcaaatgctaaacaatttgtcatcctctttggttt |
729 |
Q |
| |
|
||||||| |||||||| |||||| | || |||||||||||||| ||| |||||||||||||||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
37712754 |
ctactaatttaagggaactttatttggataatgtgaacatgtcttccatcagagagagctctttgtc-aatgctaaagaatttgtcatcctctttggttt |
37712656 |
T |
|
| Q |
730 |
ctcttcatctagcaaacactggtttgcaaggaaatttgt-tagtggcatactctctttgtcaaatcctcaaagactagatttgtcacataatcaagacct |
828 |
Q |
| |
|
||||| |||| | |||||| |||||||||||| | | |||| ||| |||||||| | |||| ||||||| | ||||||||| ||||||| |||| |
|
|
| T |
37712655 |
ctcttagtctacgagacactgtgttgcaaggaaatatatcaagtgacatcctctctttacctaatcttcaaagattggatttgtcatttaatcaaaacct |
37712556 |
T |
|
| Q |
829 |
tagtggtcaacttccaaaatccaattggagcactcctctaa-gtacttgtacctctctcatactgctttctcaggagaatctcc-tattccataggtcca |
926 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||||||||||| ||||||| ||||||| ||||||| ||||| ||| ||| ||||||||||||| | |
|
|
| T |
37712555 |
tagtggtcaacttccaaagtccaactggagcactcctctaaggtacttggtcctctcttcctctgctttttcaggtgaaattccttattccataggtcaa |
37712456 |
T |
|
| Q |
927 |
ttaaagtctcttactcatttagtcctttcattttgcaattt |
967 |
Q |
| |
|
|| |||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
37712455 |
ttgaagtctcttactcaattagtcctttcacattgcaattt |
37712415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 223 - 967
Target Start/End: Complemental strand, 37825426 - 37824686
Alignment:
| Q |
223 |
ttgttcctctacttctttcaagacaaaatcttggaaaaacggtacggattgttgcaagtgggatggtgtcacgtgtgacactgaatcagattacgtggtt |
322 |
Q |
| |
|
|||||||||| ||||||||||||| |||||||| ||||| |||| |||||||| ||||||||||||||||||| ||||| |||||| ||||| || |
|
|
| T |
37825426 |
ttgttcctctttttctttcaagacagaatcttgggaaaacagtacagattgttgtgagtgggatggtgtcacgtgcgacaccatgtcagatcacgtgatt |
37825327 |
T |
|
| Q |
323 |
ggtttggacctcagttgcaacaatttgaaaggtgaattacatcccaatagcactatcctccagttaagacaccttcaacaactcaacttggcttttaata |
422 |
Q |
| |
|
||| |||||||||||||||||||| | |||||||||||||||||||||||||| ||| | ||| | | ||||||||||||||||||||||||||||||| |
|
|
| T |
37825326 |
ggtctggacctcagttgcaacaatctaaaaggtgaattacatcccaatagcaccatctttcagcttaaacaccttcaacaactcaacttggcttttaatg |
37825227 |
T |
|
| Q |
423 |
atttttctgggtcttcaatgcctattggtattagcgatttagtgaatatcacacatctaaatctatcatactgtgacctcaatggtgacattcactccac |
522 |
Q |
| |
|
|||||||| ||||||||||||||||||| || | ||||||||||| |||||||||||||||||||| | ||| ||||||||||| | |||| ||||| |
|
|
| T |
37825226 |
atttttctttgtcttcaatgcctattggtgttggagatttagtgaaactcacacatctaaatctatcaaaatgttacctcaatggtaatattccttccac |
37825127 |
T |
|
| Q |
523 |
aatctctcatttgtcaaaattagtatctcttgatcttagcggttactcgtacgaaaaagtgggattgaaactcaattcgttcacttggaagaaactcatt |
622 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| ||| | ||| | ||| ||||||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
37825126 |
aatctctcatttgtcaaaattagtatcacttgatctcagcagaaactggcacg------tgggattgaaactcaattcattcatttggaagaaactcatt |
37825033 |
T |
|
| Q |
623 |
cataatgctactaaattaagggatctttatctaaatggagtgaacatgtcttcaatcggagagagctctttgtcaaatgctaaacaatttgtcatcctct |
722 |
Q |
| |
|
|||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| |
|
|
| T |
37825032 |
cataatgctactaatttaagggatcttcatcttaatggagtgaacatgtcttcaatcggagagagctcattgtc-aatgctaaagaatttgtcatcctct |
37824934 |
T |
|
| Q |
723 |
ttggtttctcttcatctagcaaacactggtttgcaaggaaatttgt-tagtggcatactctctttgtcaaatcctcaaagactagatttgtcacataatc |
821 |
Q |
| |
|
|||||||||||| |||| |||||||| |||||||||||| | | |||| ||| |||||||| | |||| ||||||| | ||||||||| ||||| |
|
|
| T |
37824933 |
ttggtttctcttagtctacgaaacactgtgttgcaaggaaatatatcaagtgacatcctctctttacctaatcttcaaagattggatttgtcatttaatc |
37824834 |
T |
|
| Q |
822 |
aagaccttagtggtcaacttccaaaatccaattggagcactcctctaa-gtacttgtacctctctcatactgctttctcaggagaatctcc-tattccat |
919 |
Q |
| |
|
| |||||||||||||||||||||| ||||| |||||||||||||||| ||||||| |||||||| ||||||| ||||| ||| ||| |||||||| |
|
|
| T |
37824833 |
ataaccttagtggtcaacttccaaagtccaactggagcactcctctaaggtacttggacctctcttcctctgctttttcaggtgaaattccttattccat |
37824734 |
T |
|
| Q |
920 |
aggtccattaaagtctcttactcatttagtcctttcattttgcaattt |
967 |
Q |
| |
|
||||| ||| |||||||||||||| |||| |||||||| ||||||||| |
|
|
| T |
37824733 |
aggtcaattgaagtctcttactcaattagacctttcatattgcaattt |
37824686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 51 - 967
Target Start/End: Complemental strand, 37704380 - 37703459
Alignment:
| Q |
51 |
aaatggggtccttttttattgttttgccttgttttgcccttcacttgttctttgtgctgctgcttactcactttacttcacacactttgtcattctgcaa |
150 |
Q |
| |
|
||||| |||||||||||||| | ||||||| |||| | ||||||||||||| | ||||||||||||| |||||||| ||||||| ||||| |||| |
|
|
| T |
37704380 |
aaatgcggtccttttttattctattgccttattttacttttcacttgttcttgttattgctgcttactcattttacttcctacactttctcattgtgcag |
37704281 |
T |
|
| Q |
151 |
ccaacatgacagctctgctttgttacatttcaaaaactcattttctgtcaacacttcatctcaacttgatatt---------tgttcctctacttctttc |
241 |
Q |
| |
|
||||||||| ||||| || |||||||| |||||| |||||||||||||||||||||||||| ||| | | || |||| ||| |||||| |
|
|
| T |
37704280 |
ccaacatgatagctccgccttgttacaattcaaacactcattttctgtcaacacttcatctaaacccggttttctgtctatgtgtttgtctttttctttt |
37704181 |
T |
|
| Q |
242 |
aagacaaaatcttggaaaaacggtacggattgttgcaagtgggatggtgtcacgtgtgacactgaatcagattacgtggttggtttggacctcagttgca |
341 |
Q |
| |
|
|||||| |||||||||||| ||| || ||||||||| ||||||||||||||||||| ||||| | || ||| ||||| |||||||||| |||||||||| |
|
|
| T |
37704180 |
aagacagaatcttggaaaaccggcacagattgttgcgagtgggatggtgtcacgtgcgacaccgtgtctgatcacgtgattggtttggatctcagttgca |
37704081 |
T |
|
| Q |
342 |
acaatttgaaaggtgaattacatcccaatagcactatcctccagttaagacaccttcaacaactcaacttggcttttaataatttttctgggtcttcaat |
441 |
Q |
| |
|
||||| |||||||||||||||| || |||||||| ||| | || | ||||||||||||||||||||||||||||||||| |||||||||| |||||||| |
|
|
| T |
37704080 |
acaatctgaaaggtgaattacaacctaatagcacaatctacaagcttagacaccttcaacaactcaacttggcttttaatcatttttctggatcttcaat |
37703981 |
T |
|
| Q |
442 |
gcctattggtattagcgatttagtgaatatcacacatctaaatctatcatactgtgacctcaatggtgacattcactccacaatctctcatttgtcaaaa |
541 |
Q |
| |
|
||||||||||||| |||||||||||||| |||||||||||||| |||||| ||| ||||||| ||| | | || ||||||||||||||||||||||||| |
|
|
| T |
37703980 |
gcctattggtattggcgatttagtgaatctcacacatctaaatttatcattttgtcacctcaagggtaatactccctccacaatctctcatttgtcaaaa |
37703881 |
T |
|
| Q |
542 |
ttagtatctcttgatcttagcggttactcgtacgaaaaagtgggattgaaactcaattcgttcacttggaagaaactcattcataatgctactaaattaa |
641 |
Q |
| |
|
||| |||| |||||||||||| |||| ||| || ||| || | ||| |||| || ||||||||||||||||||||||||||||| |||| |
|
|
| T |
37703880 |
ttaatatcacttgatcttagcagttatagttactcgaacatgg------aaattaatccgttgacatggaagaaactcattcataatgctactaatttaa |
37703787 |
T |
|
| Q |
642 |
gggatctttatctaaatggagtgaacatgtcttcaatcggagagagctctttgtcaaatgctaaacaatttgtcatcctctttggtttctcttcatctag |
741 |
Q |
| |
|
|||| ||| || | ||| | ||| | |||||||| || |||||||| ||||| ||||||||| ||||||||||||||||||||||||||| |||| |
|
|
| T |
37703786 |
gggagcttcatttgaatagtgtggatatgtcttccattacggagagctcattgtc-aatgctaaagaatttgtcatcctctttggtttctcttagtctat |
37703688 |
T |
|
| Q |
742 |
caaacactggtttgcaaggaaatttgt-tagtggcatactctctttgtcaaatcctcaaagactagatttgtcacataatcaagaccttagtggtcaact |
840 |
Q |
| |
|
|| | |||| |||||||||||||||| |||| ||| |||||||| | |||| ||||||| | ||||||||| ||| | |||||||||||||||| |
|
|
| T |
37703687 |
cagaaactgagttgcaaggaaatttgtcaagtgacatcctctctttacctaatcttcaaagattggatttgtcattcaattataaccttagtggtcaact |
37703588 |
T |
|
| Q |
841 |
tccaaaatccaattggagcactcctctaag-tacttgtacctctctcatactgctttctcaggagaatctcc-tattccataggtccattaaagtctctt |
938 |
Q |
| |
|
|||||||||||| |||||| |||||||||| |||||| |||||||| ||||||| ||||| ||| ||| ||||||||||||| ||| ||||||||| |
|
|
| T |
37703587 |
tccaaaatccaactggagctctcctctaagatacttgaacctctcttcctctgctttttcaggtgaaattccttattccataggtcaattgaagtctctt |
37703488 |
T |
|
| Q |
939 |
actcatttagtcctttcattttgcaattt |
967 |
Q |
| |
|
||||| |||| ||||||| ||||||||| |
|
|
| T |
37703487 |
actcaattagacctttcacattgcaattt |
37703459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 232; E-Value: 1e-127
Query Start/End: Original strand, 90 - 953
Target Start/End: Original strand, 37380810 - 37381690
Alignment:
| Q |
90 |
ttcacttgttctttgtgctgctgcttactcactttacttcacacactttgtcattctgcaaccaacatgacagctctgctttgttacatttcaaaaactc |
189 |
Q |
| |
|
||||||||||||| || || |||||||||| |||||||| |||||||| ||||| |||||||||||||| | ||||| |||||||||||||||||||| |
|
|
| T |
37380810 |
ttcacttgttcttgttgttgttgcttactcattttacttcccacactttctcattgtgcaaccaacatgatacatctgccttgttacatttcaaaaactc |
37380909 |
T |
|
| Q |
190 |
attttctgtcaacacttcatctcaacttgatatt---------------tgttcctctacttctttcaagacaaaatcttggaaaaacggtacggattgt |
274 |
Q |
| |
|
||||||| ||||||||||||| || ||||| |||||| || ||||||||||| | ||||||||||||| ||| |||||| |
|
|
| T |
37380910 |
attttctttcaacacttcatcgaaatccgatatacatttttggcctagatgttccactttttctttcaagatagaatcttggaaaaataatacagattgt |
37381009 |
T |
|
| Q |
275 |
tgcaagtgggatggtgtcacgtgtgacactgaatcagattacgtggttggtttggacctcagttgcaacaatttgaaaggtgaattacatcccaatagca |
374 |
Q |
| |
|
|| |||||||||||||||||| ||| | |||||| | ||| ||||| ||||||||||||||| |||| |||| |||||||||||||||||||||| |
|
|
| T |
37381010 |
tgtgggtgggatggtgtcacgtgcgactccatgtcagatcatgtgattggtctggacctcagttgcagcaatctgaatggtgaattacatcccaatagca |
37381109 |
T |
|
| Q |
375 |
ctatcctccagttaagacaccttcaacaactcaacttggcttttaataatttttctgggtcttcaatgcctattggtattagcgatttagtgaatatcac |
474 |
Q |
| |
|
| ||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| | ||| | || ||||| |||||||||||| |||| |
|
|
| T |
37381110 |
caatcttccagcttagacaccttcaacaactcaacttggcttttaataatttttctgggtctttattgcatgttagtattgatgatttagtgaatctcac |
37381209 |
T |
|
| Q |
475 |
acatctaaatctatcatactgtgacctcaatggtgacattcactccacaatctctcatttgtcaaaattagtatctcttgatcttagcggttactcgtac |
574 |
Q |
| |
|
|||||||||||||||| ||||| |||| |||| | |||| ||||||||||||||||||||||||||||||||| |||||||| ||| |||| | | |
|
|
| T |
37381210 |
acatctaaatctatcacactgttccctcggtggtaatattccctccacaatctctcatttgtcaaaattagtatcacttgatctcagcagttattatgat |
37381309 |
T |
|
| Q |
575 |
gaaaaagtgggattgaaactcaattcgttcacttggaagaaactcattcataatgctactaaattaagggatctttatctaaatggagtgaacatgtctt |
674 |
Q |
| |
|
| ||||||||||||||||| | || || ||||||||||||||||||||||||||||| |||||||| |||| | || | | ||||||||||| | |
|
|
| T |
37381310 |
tggcatatgggattgaaactcaatccattgacatggaagaaactcattcataatgctactaatttaagggagctttctttaggttgtgtgaacatgtcct |
37381409 |
T |
|
| Q |
675 |
caatcggagagagctctttgtcaaatgctaaacaatttgtcatcctctttggtttctcttcatctagcaaacactggtttgcaaggaaatttgt-tagtg |
773 |
Q |
| |
|
| || ||| ||||||||| || |||||||| ||||||||||||||||||||||||||| ||||| | | ||||| |||||||||||||||| |||| |
|
|
| T |
37381410 |
ctattagagcgagctctttatc-tatgctaaagaatttgtcatcctctttggtttctcttggtctaggagaaactgggttgcaaggaaatttgtcaagtg |
37381508 |
T |
|
| Q |
774 |
gcatactctctttgtcaaatcctcaaagactagatttgtcacataatcaagaccttagtggtcaacttccaaaatccaattggagcactcctct-aagta |
872 |
Q |
| |
|
||| |||||||| | |||| |||| ||||||||| ||| |||| || | || || |||||||||| |||||||| |||||||||||| | | ||| |
|
|
| T |
37381509 |
acatcctctctttacctaatctccaaacactagatttatcatctaataaatatctgagcagtcaacttccgaaatccaactggagcactcctttgaggta |
37381608 |
T |
|
| Q |
873 |
cttgtacctctctcatactgctttctcaggagaatctcc-tattccataggtccattaaagtctcttactcatttagtcctt |
953 |
Q |
| |
|
|||| ||||||||| || |||||||||| ||| ||| ||||||||||| | || |||||||| ||||| |||| |||| |
|
|
| T |
37381609 |
cttggacctctctcgcacccctttctcaggtgaaattccttattccataggccagttgaagtctctaactcaattagacctt |
37381690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 224 - 870
Target Start/End: Original strand, 37391585 - 37392228
Alignment:
| Q |
224 |
tgttcctctacttctttcaagacaaaatcttggaaaaacggtacggattgttgcaagtgggatggtgtcacgtgtgacactgaatcagattacgtggttg |
323 |
Q |
| |
|
||||||||| ||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||| ||||| |||||| ||||| ||| |
|
|
| T |
37391585 |
tgttcctctttttctttcaagacagaatcttggaaaaacagtacaaattgttgcaagtgggatggtgtcacgtgcgacaccatgtcagatcacgtgattg |
37391684 |
T |
|
| Q |
324 |
gtttggacctcagttgcaacaatttgaaaggtgaattacatcccaatagcactatcctccagttaagacaccttcaacaactcaacttggcttttaataa |
423 |
Q |
| |
|
| ||||||||||||||||||||||| ||||| ||||||||||||||||||||| | ||| | |||||||||||||||||||||||| |||| ||| |
|
|
| T |
37391685 |
aactagacctcagttgcaacaatttgaatggtgatttacatcccaatagcactatctttcagcttagacaccttcaacaactcaacttgtctttaaattt |
37391784 |
T |
|
| Q |
424 |
tttttctgggtcttcaatgcctattggtattagcgatttagtgaatatcacacatctaaatctatcatactgtgacctcaatggtgacattcactccaca |
523 |
Q |
| |
|
||||| |||||||||| ||| | |||||||| | |||||||||||| ||||| |||||||||||||| | ||| |||||| |||| | |||| ||||||| |
|
|
| T |
37391785 |
tttttttgggtcttcattgcatgttggtattggtgatttagtgaatctcacatatctaaatctatcaaattgttacctcagtggtaatattccctccaca |
37391884 |
T |
|
| Q |
524 |
atctctcatttgtcaaaattagtatctcttgatcttagcggttactcgtacgaaaaagtgggattgaaactcaattcgttcacttggaagaaactcattc |
623 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||| |||| | || || | | ||||| || | || || |||||||||||||||| |
|
|
| T |
37391885 |
atctctcatttgtcaaaattagtatcacttgatcttagcaattaccggcacttggaacaacaactcaaacttgatacattgacatggaagaaactcattc |
37391984 |
T |
|
| Q |
624 |
ataatgctactaaattaagggatctttatctaaatggagtgaacatgtcttcaatcggagagagctctttgtcaaatgctaaacaatttgtcatcctctt |
723 |
Q |
| |
|
||||||||||||| |||||||| ||| || | ||| ||||| | |||| ||| || |||||||||||||||| |||||||| ||| |||||||||||| |
|
|
| T |
37391985 |
ataatgctactaatttaagggagcttcatttgaatagagtggatatgtattccattagagagagctctttgtc-tatgctaaagaatgtgtcatcctctt |
37392083 |
T |
|
| Q |
724 |
tggtttctcttcatctagcaaacactggtttgcaaggaaatttgt-tagtggcatactctctttgtcaaatcctcaaagactagatttgtcacataatca |
822 |
Q |
| |
|
||||||||||| |||| | | | ||| |||||||||||||||| |||| ||| |||||||| | |||| ||||||||||||||||||| ||||| |
|
|
| T |
37392084 |
tggtttctcttaggctaggagaaattgggttgcaaggaaatttgtcaagtgccatcctctctttacctaatcttcaaagactagatttgtcaaataat-- |
37392181 |
T |
|
| Q |
823 |
agaccttagtggtcaacttccaaaatccaattggagcactcctctaag |
870 |
Q |
| |
|
|| ||||| ||| ||||||||||||| || ||||||||||||||||| |
|
|
| T |
37392182 |
-gaacttagcggtaaacttccaaaatcaaactggagcactcctctaag |
37392228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 176; E-Value: 3e-94
Query Start/End: Original strand, 223 - 562
Target Start/End: Original strand, 37399450 - 37399789
Alignment:
| Q |
223 |
ttgttcctctacttctttcaagacaaaatcttggaaaaacggtacggattgttgcaagtgggatggtgtcacgtgtgacactgaatcagattacgtggtt |
322 |
Q |
| |
|
|||||||||| ||||||||||||| |||||||| ||||| |||| |||||||| ||||||||||||||||||| ||||| |||||| ||||| || |
|
|
| T |
37399450 |
ttgttcctctttttctttcaagacagaatcttgggaaaacagtacagattgttgtgagtgggatggtgtcacgtgcgacaccatgtcagatcacgtgatt |
37399549 |
T |
|
| Q |
323 |
ggtttggacctcagttgcaacaatttgaaaggtgaattacatcccaatagcactatcctccagttaagacaccttcaacaactcaacttggcttttaata |
422 |
Q |
| |
|
||| ||||||||||||||||||| | ||||||||||||||||||||||||| ||| | ||| | ||||||||||||||||| || ||||||||||||| |
|
|
| T |
37399550 |
ggtctggacctcagttgcaacaaactaaaaggtgaattacatcccaatagcatcatctttcagcttagacaccttcaacaacttaatttggcttttaata |
37399649 |
T |
|
| Q |
423 |
atttttctgggtcttcaatgcctattggtattagcgatttagtgaatatcacacatctaaatctatcatactgtgacctcaatggtgacattcactccac |
522 |
Q |
| |
|
||||||||||||||||||||||||||||| || | ||||||||||| |||||||||||||| |||||| ||| ||||||||||| | |||| ||||| |
|
|
| T |
37399650 |
atttttctgggtcttcaatgcctattggtgttggagatttagtgaaactcacacatctaaatacatcatattgtaacctcaatggtaatattccttccac |
37399749 |
T |
|
| Q |
523 |
aatctctcatttgtcaaaattagtatctcttgatcttagc |
562 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
37399750 |
aatctctcatttgtcaaaattagtatcacttgatcttagc |
37399789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 135; E-Value: 8e-70
Query Start/End: Original strand, 47 - 884
Target Start/End: Complemental strand, 37430473 - 37429616
Alignment:
| Q |
47 |
ctctaaatggggtccttttttattgttttgccttgttttgcccttcacttgttctttgtgctgctgcttactcactttacttcacacactttgtcattct |
146 |
Q |
| |
|
||||||||||||||||||| | || | || |||| | ||||| ||||||||||||| || ||||||| |||| |||||||| | || || ||| | | |
|
|
| T |
37430473 |
ctctaaatggggtccttttgttttctatttccttatcttgcctttcacttgttcttgttgatgctgctaactctttttacttcctatacattttcaatgt |
37430374 |
T |
|
| Q |
147 |
gcaaccaacatgacagctctgctttgttacatttcaaaaactcattttctgtcaacacttcatctcaacttgatatttg---------ttcctctacttc |
237 |
Q |
| |
|
|||| || |||||||| ||||| |||||||| ||||| || ||||||| | |||||||||||||||||| || | |||| ||||||| ||| |
|
|
| T |
37430373 |
gcaagcatcatgacagttctgccttgttacaattcaagaattcattttttatcaacacttcatctcaacctggtttttggtctcactgttcctctttttc |
37430274 |
T |
|
| Q |
238 |
tttcaagacaaaatcttggaaaaacggtacggattgttgcaagtgggatggtgtcacgtgtgacactgaatcagattacgtggttggtttggacctcagt |
337 |
Q |
| |
|
|||||||||| |||||||||||| ||| || ||||| ||| ||||||||||||||||||| |||| | ||||| ||| ||||| ||||||| ||| |
|
|
| T |
37430273 |
tttcaagacagaatcttggaaaaccggcacagattgctgcgagtgggatggtgtcacgtgcgacatcatgtacgattatgtgattggtctggaccttagt |
37430174 |
T |
|
| Q |
338 |
tgcaacaatttgaaaggtgaattacatcccaatagcactatcctccagttaagacaccttcaacaactcaacttggcttttaataatttttctgggtctt |
437 |
Q |
| |
|
||||||||| |||| ||||||||| |||||||||| ||| | || | | ||||||||||||||||||||||||||||||| |||||| ||||||| |
|
|
| T |
37430173 |
tgcaacaatctgaacggtgaattagcggccaatagcaccatctttcaacttaaacaccttcaacaactcaacttggcttttaatgattttttcgggtctt |
37430074 |
T |
|
| Q |
438 |
caatgcctattggtattagcgatttagtgaatatcacacatctaaatctatcatactgtgacctcaatggtgacattcactccacaatctctcatttgtc |
537 |
Q |
| |
|
| ||| | ||||||| | ||| ||||||| |||||||||||||||||||| || | | | | |||| | ||| ||||||||||||||||||||| |
|
|
| T |
37430073 |
cggtgcatgctggtattggtgatctagtgaagctcacacatctaaatctatcaaacaccggcattagtggtaatatttcctccacaatctctcatttgtc |
37429974 |
T |
|
| Q |
538 |
aaaattagtatctcttgatcttagcggttactcgtacgaaaaagtgggattgaaactc--aattcgt----tcacttggaagaaactcattcataatgct |
631 |
Q |
| |
|
|||||||||||| |||||||||||| |||| ||| || ||| | ||||||| | || || |||| |||||||||||||||| ||||||| |
|
|
| T |
37429973 |
aaaattagtatcacttgatcttagcagttatagttactggaacatggaacagaaactcgaacttggtccactcacatggaagaaactcattcttaatgct |
37429874 |
T |
|
| Q |
632 |
actaaattaagggatctttatctaaatggagtgaacatgtcttcaatcggagagagctctttgtcaaatgctaaacaatttgtcatcctctttggtttct |
731 |
Q |
| |
|
||||| |||||||| ||| || | ||| ||| | || |||| |||| ||||||| |||||||| |||||| ||||| || ||||||||||| || |
|
|
| T |
37429873 |
actaatttaagggagcttcatttgaatactgtggatatatctttaatcagagagagatctttgtc-gctgctaaggaatttatcgtcctctttggtcgct |
37429775 |
T |
|
| Q |
732 |
cttcatctagcaaacactggtttgcaaggaaattt-----gttagtggcatactctctttgtcaaatcctcaaagactagatttgtcacataatcaagac |
826 |
Q |
| |
|
||| ||||| ||| |||||| ||||||| |||||| | ||||| ||| |||||||| |||||| |||| |||||||||||| |||| | ||| |
|
|
| T |
37429774 |
cttgatctatcaatcactggcttgcaagaaaattttccaagctagtgacatcctctctttaccaaatcttcaagaactagatttgtcttttaatgaggac |
37429675 |
T |
|
| Q |
827 |
cttagtggtcaacttccaaaatccaattggagcactcctctaa-gtacttgtacctctc |
884 |
Q |
| |
|
|||||||| |||||||| ||||| ||||||||||| |||| ||||||| ||||||| |
|
|
| T |
37429674 |
cttagtgggaaacttccactgtccaactggagcactcccctaaggtacttggacctctc |
37429616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 608 - 942
Target Start/End: Original strand, 37399820 - 37400156
Alignment:
| Q |
608 |
tggaagaaactcattcataatgctactaaattaagggatctttatctaaatggagtgaacatgtcttcaatcggagagagctctttgtcaaatgctaaac |
707 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||| ||| || | ||| |||||||||||||| || |||||||||||||||||| ||||||| |
|
|
| T |
37399820 |
tggaagaaactcattcataatgctactaatttaagggagcttcatttgaatattgtgaacatgtcttccctcagagagagctctttgtcaa-tgctaaag |
37399918 |
T |
|
| Q |
708 |
aatttgtcatcctctttggtttctcttcatctagcaaacactggtttgcaaggaaatttgtta-gtggcatactctctttgtcaaatcctcaaagactag |
806 |
Q |
| |
|
||||||||||||||||||||||||||| |||| || | |||| |||||||||||||||| | ||| ||| |||||||| | |||| ||||||| | | |
|
|
| T |
37399919 |
aatttgtcatcctctttggtttctcttagtctatcagaaactgagttgcaaggaaatttgtcaagtgacatcctctctttacctaatcttcaaagattgg |
37400018 |
T |
|
| Q |
807 |
atttgtcacataatcaagaccttagtggtcaacttccaaaatccaattggagcactcctctaa-gtacttgtacctctctcatactgctttctcaggag- |
904 |
Q |
| |
|
|||||||| ||||||| |||||||||||||||||||||| ||||| |||||||||||||||| ||||||| ||||||| ||||||| ||||| | |
|
|
| T |
37400019 |
atttgtcatttaatcaaaaccttagtggtcaacttccaaagtccaactggagcactcctctaaggtacttggtcctctcttcctctgctttttcaggtga |
37400118 |
T |
|
| Q |
905 |
aatctcctattccataggtccattaaagtctcttactc |
942 |
Q |
| |
|
||| ||||||||||||| | ||| |||| |||||||| |
|
|
| T |
37400119 |
aattccctattccataggccaattgaagtatcttactc |
37400156 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 40 - 766
Target Start/End: Original strand, 37411743 - 37412479
Alignment:
| Q |
40 |
taagttgctctaaatggggtccttttttattgttttgccttgttttgcccttcacttgttctttgtgctgctgcttactcactttacttcacacactttg |
139 |
Q |
| |
|
||||||||||||||||||||||| |||| || | ||| | | |||| || ||||||||||||| |||||||| ||||||| |||||||| |||| || |
|
|
| T |
37411743 |
taagttgctctaaatggggtcctgttttgttctattgtcctattttacctttcacttgttcttgttgctgctgtttactcattttacttcctacaccttc |
37411842 |
T |
|
| Q |
140 |
tcattctgcaaccaacatgacagctctgctttgttacatttcaaaaactcattttctgtcaa---cacttcatctcaacttgatatttg---------tt |
227 |
Q |
| |
|
||||| |||||| | |||||||||| ||| |||||||| ||||| |||| | || |||||| || ||||||||| | ||||||||| || |
|
|
| T |
37411843 |
tcattatgcaactatcatgacagctttgccttgttacaattcaagaacttacttcttgtcaatggcatttcatctcagcatgatatttggcctagttgtt |
37411942 |
T |
|
| Q |
228 |
cctctacttctttcaagacaaaatcttggaaaaacggtacggattgttgcaagtgggatggtgtcacgtgtgacactgaatcagattacgtggttggttt |
327 |
Q |
| |
|
||||| |||||| || ||| | ||||||||||| ||| ||||||||| ||||| ||||||||| ||| ||||| | | ||| | ||| ||||||| |
|
|
| T |
37411943 |
cctctttttctttgaaaacagattcttggaaaaataatacagattgttgcgagtggtatggtgtcatgtgcgacaccgttttggatcatgtgattggttt |
37412042 |
T |
|
| Q |
328 |
ggacctcagttgcaacaatttgaaaggtgaattacatcccaatagcactatcctccagttaagacaccttcaacaactcaacttggcttttaataatttt |
427 |
Q |
| |
|
|||||| || ||||||||| | |||||||||||||||| ||||||||||||| || | | | ||||||||||| ||||||| ||||||||||| ||||| |
|
|
| T |
37412043 |
ggaccttaggtgcaacaatcttaaaggtgaattacatctcaatagcactatcttcaaacttaaacaccttcaacgactcaac-tggcttttaatgatttt |
37412141 |
T |
|
| Q |
428 |
tctgggtcttcaatgcctattggtattagcgatttagtgaatatcacacatctaaatctatcatactgtgacctcaatggtgacattcactccacaatct |
527 |
Q |
| |
|
| ||||||| ||| | || |||||| ||||| |||||| |||||||||| ||| ||||| || || ||| | || | |||| |||||||||| |
|
|
| T |
37412142 |
ttcaggtcttcggtgcatgatgatattagtgatttggtgaatctcacacatcttaatttatcaaacactggaatcatttgtaatattccttccacaatct |
37412241 |
T |
|
| Q |
528 |
ctcatttgtcaaaattagtatctcttgatcttagcggttactcgtacgaaaaagtgggattgaaactcaattcgttcacttggaagaaactcattcataa |
627 |
Q |
| |
|
|||| ||||||||||||||||| |||||||||||| || ||| ||| | | | ||||| || | ||||| |||||| ||||||||||||| |
|
|
| T |
37412242 |
ctcacttgtcaaaattagtatcacttgatcttagcagtaactgatacatggatcaaaaactcaaacttgatcccttcacatggaaggaactcattcataa |
37412341 |
T |
|
| Q |
628 |
tgctactaaattaagggatctttatctaaatggagtgaacatgtcttcaatcggagagagctctttgtcaaatgctaaacaatttgtcatcctctttggt |
727 |
Q |
| |
|
|| ||| || ||||| || ||| |||| ||| | || | |||||||| ||| |||||| |||||||| ||||||| ||||||||||||||| |||| |
|
|
| T |
37412342 |
tgttacaaatttaagcgagcttcatctgaatagtgttgatatgtcttccatcagagagaattctttgtc-gctgctaaagaatttgtcatcctctctggt |
37412440 |
T |
|
| Q |
728 |
ttctcttcatctagcaaacactggtttgcaaggaaattt |
766 |
Q |
| |
|
|||||| ||||| |||||| |||||||||||||||| |
|
|
| T |
37412441 |
ctctcttagtctagggaacactagtttgcaaggaaattt |
37412479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 39 - 210
Target Start/End: Original strand, 37391377 - 37391548
Alignment:
| Q |
39 |
gtaagttgctctaaatggggtccttttttattgttttgccttgttttgcccttcacttgttctttgtgctgctgcttactcactttacttcacacacttt |
138 |
Q |
| |
|
||||||||||||||||||||||||| |||||| | ||||||| |||| || ||||||||||| | || || |||||||||| |||||||| | ||| | |
|
|
| T |
37391377 |
gtaagttgctctaaatggggtccttgtttattttattgccttattttacctttcacttgttcatgttgttgttgcttactcattttacttcctatactct |
37391476 |
T |
|
| Q |
139 |
gtcattctgcaaccaacatgacagctctgctttgttacatttcaaaaactcattttctgtcaacacttcatc |
210 |
Q |
| |
|
||||| ||||||| ||||| |||||||| ||| |||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
37391477 |
ctcattgtgcaaccttcatgatagctctgccttgctacaattcaaaaactcattttttgtcaacacttcatc |
37391548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 47 - 210
Target Start/End: Complemental strand, 37441659 - 37441499
Alignment:
| Q |
47 |
ctctaaatggggtccttttttattgttttgccttgttttgcccttcacttgttctttgtgctgctgcttactcactttacttcacacactttgtcattct |
146 |
Q |
| |
|
||||||||||| |||||||||||| | ||||||| |||| || ||||| ||||||| || ||||||||||||| |||||||| | ||||| ||| | | |
|
|
| T |
37441659 |
ctctaaatggg-tccttttttattttattgccttattttacctttcacatgttcttcttgttgctgcttactcattttacttcctatactttctcactgt |
37441561 |
T |
|
| Q |
147 |
gcaaccaacatgacagctctgctttgttacatttcaaaaactcattttctgtcaacacttcatc |
210 |
Q |
| |
|
| ||| ||||||||| |||||| |||||||| ||||||||||| |||| |||||||||||||| |
|
|
| T |
37441560 |
gaaacaaacatgacacctctgccttgttacaattcaaaaactc--tttcagtcaacacttcatc |
37441499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 114 - 220
Target Start/End: Complemental strand, 37825562 - 37825456
Alignment:
| Q |
114 |
ttactcactttacttcacacactttgtcattctgcaaccaacatgacagctctgctttgttacatttcaaaaactcattttctgtcaacacttcatctca |
213 |
Q |
| |
|
||||||| |||||||| ||||||| ||| | |||||| ||||||||| |||||| |||||||| ||||||||||| ||||||||||||||||||||| | |
|
|
| T |
37825562 |
ttactcattttacttcctacactttctcactgtgcaacaaacatgacaactctgccttgttacaattcaaaaactctttttctgtcaacacttcatctaa |
37825463 |
T |
|
| Q |
214 |
acttgat |
220 |
Q |
| |
|
|| |||| |
|
|
| T |
37825462 |
acctgat |
37825456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 37399290 - 37399410
Alignment:
| Q |
90 |
ttcacttgttctttgtgctgctgcttactcactttacttcacacactttgtcattctgcaaccaacatgacagctctgctttgttacatttcaaaaactc |
189 |
Q |
| |
|
||||||||||||| || || || ||||||| ||||||||| ||||||| ||| | |||||||| ||||||| |||||| |||||||| |||||||| || |
|
|
| T |
37399290 |
ttcacttgttcttgttgttgttgattactcattttacttcatacactttctcactatgcaaccatcatgacacctctgccttgttacaattcaaaaattc |
37399389 |
T |
|
| Q |
190 |
attttctgtcaacacttcatc |
210 |
Q |
| |
|
||||| ||| |||||||||| |
|
|
| T |
37399390 |
attttttgttgacacttcatc |
37399410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 287; Significance: 1e-160; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 287; E-Value: 1e-160
Query Start/End: Original strand, 235 - 967
Target Start/End: Complemental strand, 14554551 - 14553829
Alignment:
| Q |
235 |
ttctttcaagacaaaatcttggaaaaacggtacggattgttgcaagtgggatggtgtcacgtgtgacactgaatcagattacgtggttggtttggacctc |
334 |
Q |
| |
|
||||||||||||| ||||||||||||| |||| ||||||||| ||||||||||||||||||| ||||| ||||| | ||||| ||| | ||||| |
|
|
| T |
14554551 |
ttctttcaagacagaatcttggaaaaagagtacagattgttgcgagtgggatggtgtcacgtgcgacaccatatcaggtcacgtgattgaactagacctt |
14554452 |
T |
|
| Q |
335 |
agttgcaacaatttgaaaggtgaattacatcccaatagcactatcctccagttaagacaccttcaacaactcaacttggcttttaataatttttctgggt |
434 |
Q |
| |
|
||||||||||||||||| |||||||||||||| |||||||||||| ||||| | ||||||||||||||||||||| | ||||||||| || ||| ||||| |
|
|
| T |
14554451 |
agttgcaacaatttgaatggtgaattacatcctaatagcactatcttccagcttagacaccttcaacaactcaacctagcttttaatgatatttttgggt |
14554352 |
T |
|
| Q |
435 |
cttcaatgcctattggtattagcgatttagtgaatatcacacatctaaatctatcatactgtgacctcaatggtgacattcactccacaatctctcattt |
534 |
Q |
| |
|
||||||||||| |||||||| ||||||||||||| ||| ||||||||| |||| | ||| |||| | |||| | |||| ||||||||||||||||| |
|
|
| T |
14554351 |
cttcaatgcctcttggtattggcgatttagtgaaactcatgcatctaaatatatccaattgttaccttagtggtaatattccttccacaatctctcattt |
14554252 |
T |
|
| Q |
535 |
gtcaaaattagtatctcttgatcttagcggttactcgtacgaaaaagtgggattgaaactcaattcgttcacttggaagaaactcattcataatgctact |
634 |
Q |
| |
|
||||||||||||||| |||||||||||| | ||| || | ||| || | ||| | || || ||||| ||||||||||||||||||||| |
|
|
| T |
14554251 |
gtcaaaattagtatcacttgatcttagcattaactggttc------------ttggaaattaatccatttacatggaataaactcattcataatgctact |
14554164 |
T |
|
| Q |
635 |
aaattaagggatctttatctaaatggagtgaacatgtcttcaatcggagagagctctttgtcaaatgctaaacaatttgtcatcctctttggtttctctt |
734 |
Q |
| |
|
|| ||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
14554163 |
aatttaagggatctttatctgaatggagtgaacatgtcttccatcagagagagctctttgtc-aatgctaaagaatttgtcatcctctttggtttctctt |
14554065 |
T |
|
| Q |
735 |
catctagcaaacactggtttgcaaggaaatttgt-tagtggcatactctctttgtcaaatcctcaaagactagatttgtcacataatcaagaccttagtg |
833 |
Q |
| |
|
|||||||||||| || |||||||||||||||| |||| ||||||||||||| |||||| ||||| |||||||||| | |||| | | ||||||| |
|
|
| T |
14554064 |
agtctagcaaacaccgggttgcaaggaaatttgtcaagtgacatactctctttgccaaatcttcaaaaactagatttggtaggtaatgatggtcttagtg |
14553965 |
T |
|
| Q |
834 |
gtcaacttccaaaatccaattggagcactcctctaa-gtacttgtacctctctcatactgctttctcaggagaatctcc-tattccataggtccattaaa |
931 |
Q |
| |
|
||||||||||||||||||| ||||| |||||||||| ||||||||||||| | | ||||||||||||| ||| ||| ||||||||||||| ||| || |
|
|
| T |
14553964 |
gtcaacttccaaaatccaactggagtactcctctaaggtacttgtacctccattactctgctttctcaggtgaaattccttattccataggtcaattgaa |
14553865 |
T |
|
| Q |
932 |
gtctcttactcatttagtcctttcattttgcaattt |
967 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||| |
|
|
| T |
14553864 |
gtctcttactcatttagtcctttcagattgcaattt |
14553829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 39 - 207
Target Start/End: Complemental strand, 14554780 - 14554615
Alignment:
| Q |
39 |
gtaagttgctctaaatggggtccttttttattgttttgccttgttttgcccttcacttgttctttgtgctgctgcttactcactttacttcacacacttt |
138 |
Q |
| |
|
||||||| ||||||||||| |||||||||||| | ||||||| |||| || ||||||| |||| | || |||||||||| |||||||| | ||||| |
|
|
| T |
14554780 |
gtaagtttctctaaatgggatccttttttattctattgccttattttacctttcactttttct---tattgttgcttactcattttacttcctatacttt |
14554684 |
T |
|
| Q |
139 |
gtcattctgcaaccaacatgacagctctgctttgttacatttcaaaaactcattttctgtcaacacttc |
207 |
Q |
| |
|
||||| |||||||||||||||| |||||| |||||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
14554683 |
ctcattgtgcaaccaacatgacacctctgccttgttacaattcaaaaactctttttctgtcaacacttc |
14554615 |
T |
|
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