View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4812-Insertion-9 (Length: 458)
Name: NF4812-Insertion-9
Description: NF4812
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4812-Insertion-9 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 384; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 384; E-Value: 0
Query Start/End: Original strand, 22 - 458
Target Start/End: Original strand, 35204452 - 35204894
Alignment:
| Q |
22 |
agatgctctaaatctaactgcttatctggctagtacgtaccaatggccaccaaacgcataagttcccattaaattctcaacctatccatccttttttgtg |
121 |
Q |
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| T |
35204452 |
agatgctctaaatctaactgtttatctggctagtacgtaccaatggccaccaaacgcataagttcccattaaattctcaacccatccatccttttttgtg |
35204551 |
T |
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| Q |
122 |
gtccctatcatatcaaatcccacttcatcataactctatatattcttgttggcaatccctcctttgatgcaaccaccaagcctcttgtatctttcaacaa |
221 |
Q |
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| T |
35204552 |
gtccctatcatatcaaatcccacttcatcataactctatatattcttgttggcaatccctcctttgatgcaaccaccaagcctcttgtatctttcaacaa |
35204651 |
T |
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| Q |
222 |
attaaactt------ttataagcttaaaccaccaatatggttttcccacaagaagagaaagagagtttagtatatgatttgagagtatcctcagttgggc |
315 |
Q |
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| T |
35204652 |
attaaacttgctttcttataagcttaaaccaccaatatggttttcccacaagaagagaaagagagcttagtgtatgatttgagagtatcctcagttgggc |
35204751 |
T |
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| Q |
316 |
caggtcatgccaccgggtcggatgtttttcacaatccgaacggtttggacctggccatgaaacttcactaccttaaagtcgtttacttctttgactccga |
415 |
Q |
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| T |
35204752 |
caggtcatgccaccgggtcggatgtttttcattatccgaacggtttggatctgaccatgaaacttcactaccttaaagtcgtttacttctttgactccga |
35204851 |
T |
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| Q |
416 |
ggctgcacaaggcctaacaattaagaaaataaaagaatcattg |
458 |
Q |
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| T |
35204852 |
ggctgcacaaggcctaacaattaagaaaataaaagagtcattg |
35204894 |
T |
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