View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4813-Insertion-16 (Length: 411)
Name: NF4813-Insertion-16
Description: NF4813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4813-Insertion-16 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 396; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 396; E-Value: 0
Query Start/End: Original strand, 8 - 411
Target Start/End: Original strand, 44837273 - 44837676
Alignment:
| Q |
8 |
aatatttcttatccctgcagatagtattccttctgttatcattctacactcatcctcctcgctcatacatgtttcagccatatcgaaaaaagccgagtag |
107 |
Q |
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| T |
44837273 |
aatatttcttaaccctacagatagtattccttctgttatcattctacactcatcctcctcgctcatacatgtttcagccatatcgaaaaaagccgagtag |
44837372 |
T |
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| Q |
108 |
aagaacaacgcttcaacgaatcggttcacaaaagactgcgaattaagacttgcttcagtttcaagtactatcattatacatggtttgatatctctcaaaa |
207 |
Q |
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| T |
44837373 |
aagaacaacgcttcaacgaatcggttcacaaaagactgcgaattaagacttgcttcagtttcaagtactatcattatacatggtttgatatctctcaaaa |
44837472 |
T |
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| Q |
208 |
ccctcatcaaattttccatacaatcttgctttgatattaaagtccttagaaaatatggagaataaacagcaacagcttcatccttttcaatttcaaaatc |
307 |
Q |
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| T |
44837473 |
ccctcatcaaattttccatacaatcttgctttgatattaaagtccttagaaaatatggagaataaacagcaacagcttcatccttttcaatttcaaaatc |
44837572 |
T |
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| Q |
308 |
atcctctttgatttccaacatatcttctactaaaacaggtttatataaaaagggcaagttcaatgattcagcaaaactagctaaatttttgccagtttct |
407 |
Q |
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| T |
44837573 |
atcctctttgatttccaacatatcttctactaaaacaggtttatataaaaagggcaagttcaatgattcagcaaaactagctaaatttttgccagtttct |
44837672 |
T |
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| Q |
408 |
tcaa |
411 |
Q |
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| T |
44837673 |
tcaa |
44837676 |
T |
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Target: chr1 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 409
Target Start/End: Original strand, 38927092 - 38927153
Alignment:
| Q |
348 |
ttatataaaaagggcaagttcaatgattcagcaaaactagctaaatttttgccagtttcttc |
409 |
Q |
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| T |
38927092 |
ttatataaaaagggtatgttcaaggattcagcaaaactcattaaacttttgccaatttcttc |
38927153 |
T |
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