View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4813_low_24 (Length: 226)
Name: NF4813_low_24
Description: NF4813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4813_low_24 |
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Alignment Details
Target: chr1 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 19 - 211
Target Start/End: Complemental strand, 33330206 - 33330014
Alignment:
| Q |
19 |
acatacgaaggagttcaggggaatggtgtctgattcgagaccattcgtcacaagtaaacagtagccttgagaatgatctcggaccaggcttcattccccc |
118 |
Q |
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| T |
33330206 |
acatacgaaggagttcaggggaatggtgtctgattcgagaccattcgtcacaagtaaacagtagccttgagaatgatctcggaccaggcttcattccccc |
33330107 |
T |
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| Q |
119 |
tagctcatagtatcatgcaaccagtcttgttcctggcaattcaattcatactttcacctccaagagaattcaatgaccaaataacatgtaagt |
211 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
33330106 |
tagctcatagtatcatgcaatcagtcttgttcctggcaattcaattcatattttcacctccaagagaattcaatgaccaaataacatgtaagt |
33330014 |
T |
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