View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4814-Insertion-4 (Length: 628)

Name: NF4814-Insertion-4
Description: NF4814
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4814-Insertion-4
NF4814-Insertion-4
[»] chr3 (122 HSPs)
chr3 (8-592)||(37454488-37455072)
chr3 (371-592)||(10728636-10728857)
chr3 (371-592)||(39038030-39038251)
chr3 (371-592)||(50762045-50762266)
chr3 (371-592)||(44906498-44906729)
chr3 (371-592)||(17946278-17946509)
chr3 (371-592)||(34484015-34484246)
chr3 (371-592)||(36674115-36674346)
chr3 (380-592)||(26107260-26107482)
chr3 (371-592)||(11431516-11431747)
chr3 (371-592)||(52810368-52810599)
chr3 (371-587)||(40897134-40897360)
chr3 (371-592)||(23753392-23753602)
chr3 (379-590)||(48379155-48379376)
chr3 (370-591)||(32580166-32580396)
chr3 (371-592)||(54628833-54629065)
chr3 (375-592)||(18749606-18749833)
chr3 (372-592)||(52617956-52618180)
chr3 (371-592)||(10660525-10660732)
chr3 (371-586)||(51737717-51737943)
chr3 (374-592)||(31646271-31646497)
chr3 (371-592)||(44276379-44276596)
chr3 (373-566)||(20832984-20833187)
chr3 (374-591)||(6035039-6035266)
chr3 (461-592)||(39842479-39842610)
chr3 (371-582)||(50903235-50903459)
chr3 (370-582)||(20498198-20498420)
chr3 (371-582)||(19253817-19254038)
chr3 (386-592)||(15492852-15493061)
chr3 (371-582)||(996081-996302)
chr3 (371-582)||(10139141-10139362)
chr3 (371-557)||(6975739-6975922)
chr3 (371-582)||(3999640-3999861)
chr3 (371-582)||(37820472-37820693)
chr3 (371-568)||(33807807-33808015)
chr3 (371-567)||(35337725-35337930)
chr3 (371-582)||(6589554-6589775)
chr3 (371-566)||(25418356-25418561)
chr3 (371-582)||(3206200-3206412)
chr3 (371-566)||(40246834-40247039)
chr3 (371-582)||(44762032-44762253)
chr3 (513-590)||(45862983-45863060)
chr3 (371-582)||(54625582-54625803)
chr3 (255-349)||(8400902-8400996)
chr3 (376-568)||(33996550-33996752)
chr3 (457-582)||(27899420-27899545)
chr3 (371-582)||(29448853-29449074)
chr3 (373-481)||(12103621-12103729)
chr3 (379-523)||(53929192-53929336)
chr3 (263-349)||(50823745-50823831)
chr3 (263-349)||(50852029-50852115)
chr3 (371-440)||(18749560-18749629)
chr3 (264-349)||(22371729-22371814)
chr3 (264-349)||(30534902-30534987)
chr3 (261-350)||(37330604-37330693)
chr3 (371-521)||(29029996-29030145)
chr3 (263-349)||(7417845-7417931)
chr3 (405-510)||(539481-539586)
chr3 (371-519)||(1440020-1440169)
chr3 (261-349)||(35198812-35198900)
chr3 (371-510)||(52114518-52114658)
chr3 (377-510)||(51699557-51699689)
chr3 (263-349)||(22855934-22856020)
chr3 (261-349)||(34824603-34824691)
chr3 (34-90)||(37454453-37454509)
chr3 (457-545)||(52080003-52080091)
chr3 (261-349)||(52545368-52545456)
chr3 (371-519)||(55235176-55235322)
chr3 (263-336)||(25910665-25910738)
chr3 (502-582)||(6131228-6131308)
chr3 (458-582)||(5825139-5825273)
chr3 (371-422)||(27240408-27240459)
chr3 (267-349)||(55468046-55468129)
chr3 (371-542)||(22057751-22057933)
chr3 (267-349)||(43334057-43334139)
chr3 (455-532)||(23535866-23535943)
chr3 (370-433)||(6131325-6131388)
chr3 (371-433)||(10660483-10660545)
chr3 (264-349)||(29635915-29636001)
chr3 (371-433)||(36674326-36674388)
chr3 (263-344)||(19872482-19872563)
chr3 (371-431)||(3206394-3206454)
chr3 (371-431)||(23753584-23753644)
chr3 (374-425)||(27899379-27899430)
chr3 (371-433)||(6131367-6131429)
chr3 (371-433)||(11431474-11431536)
chr3 (371-433)||(18749518-18749580)
chr3 (371-433)||(27240439-27240501)
chr3 (371-417)||(38772325-38772371)
chr3 (371-433)||(40897092-40897154)
chr3 (255-349)||(42876262-42876355)
chr3 (372-426)||(44276338-44276392)
chr3 (371-433)||(44906709-44906771)
chr3 (371-433)||(50762246-50762308)
chr3 (371-433)||(50903439-50903501)
chr3 (371-433)||(54628791-54628853)
chr3 (371-431)||(1440151-1440210)
chr3 (371-431)||(10139344-10139404)
chr3 (371-431)||(19253775-19253835)
chr3 (400-436)||(27593198-27593234)
chr3 (371-431)||(35337683-35337743)
chr3 (400-436)||(36786017-36786053)
chr3 (371-431)||(37820675-37820735)
chr3 (371-431)||(44762235-44762295)
chr3 (371-422)||(539588-539639)
chr3 (375-425)||(539524-539574)
chr3 (371-433)||(2024155-2024217)
chr3 (371-429)||(6589512-6589570)
chr3 (371-433)||(31646480-31646542)
chr3 (371-433)||(52618161-52618223)
chr3 (370-431)||(6131411-6131471)
chr3 (403-436)||(10216163-10216196)
chr3 (403-436)||(10225671-10225704)
chr3 (372-433)||(44276296-44276357)
chr3 (261-349)||(50725993-50726082)
chr3 (261-349)||(50786766-50786855)
chr3 (370-431)||(51699677-51699738)
chr3 (371-431)||(996284-996343)
chr3 (371-431)||(20498157-20498217)
chr3 (128-156)||(37150181-37150209)
chr3 (400-436)||(39338299-39338335)
chr3 (371-431)||(40246792-40246852)
[»] chr8 (76 HSPs)
chr8 (371-592)||(7466326-7466547)
chr8 (371-592)||(32497516-32497737)
chr8 (371-592)||(18305955-18306176)
chr8 (371-592)||(16362187-16362408)
chr8 (371-592)||(9288441-9288672)
chr8 (371-592)||(14782119-14782350)
chr8 (371-592)||(19717865-19718096)
chr8 (371-592)||(44725794-44726025)
chr8 (371-592)||(39467452-39467683)
chr8 (374-592)||(31623689-31623897)
chr8 (371-592)||(26856057-26856289)
chr8 (371-592)||(42305779-42306000)
chr8 (371-592)||(18958711-18958942)
chr8 (378-587)||(10295369-10295589)
chr8 (371-592)||(4403098-4403329)
chr8 (371-592)||(43166674-43166905)
chr8 (405-592)||(37857144-37857331)
chr8 (371-560)||(4031294-4031473)
chr8 (370-582)||(41479087-41479299)
chr8 (371-582)||(2704813-2705034)
chr8 (371-582)||(26374424-26374645)
chr8 (371-582)||(24501807-24502028)
chr8 (371-582)||(43959649-43959859)
chr8 (371-582)||(42938111-42938332)
chr8 (377-567)||(10392246-10392446)
chr8 (371-582)||(42735271-42735492)
chr8 (371-582)||(5576614-5576836)
chr8 (371-557)||(32711313-32711497)
chr8 (371-582)||(42937344-42937563)
chr8 (261-349)||(32296636-32296724)
chr8 (370-582)||(7506893-7507115)
chr8 (267-349)||(17095597-17095679)
chr8 (263-349)||(19723358-19723444)
chr8 (371-566)||(23115179-23115383)
chr8 (263-349)||(11404048-11404134)
chr8 (263-349)||(22711556-22711642)
chr8 (263-349)||(36261693-36261779)
chr8 (370-592)||(39189800-39190029)
chr8 (263-344)||(29767238-29767319)
chr8 (267-349)||(28739564-28739646)
chr8 (263-349)||(41553332-41553418)
chr8 (267-349)||(11909426-11909508)
chr8 (263-324)||(27879559-27879620)
chr8 (263-324)||(28019740-28019801)
chr8 (261-349)||(30682886-30682973)
chr8 (263-337)||(11610339-11610413)
chr8 (263-349)||(43288119-43288205)
chr8 (264-349)||(4840187-4840272)
chr8 (371-433)||(14782330-14782392)
chr8 (371-433)||(44726005-44726067)
chr8 (284-349)||(21355004-21355069)
chr8 (455-523)||(13478313-13478381)
chr8 (371-433)||(7466284-7466346)
chr8 (371-433)||(18306156-18306218)
chr8 (371-433)||(18958922-18958984)
chr8 (375-433)||(19718076-19718134)
chr8 (370-435)||(29930837-29930903)
chr8 (371-433)||(42305980-42306042)
chr8 (371-436)||(32497432-32497497)
chr8 (370-431)||(32711479-32711540)
chr8 (371-431)||(4031455-4031515)
chr8 (371-431)||(5576818-5576878)
chr8 (371-431)||(8543514-8543574)
chr8 (371-431)||(23115365-23115425)
chr8 (371-431)||(42735474-42735534)
chr8 (371-431)||(42938314-42938374)
chr8 (371-431)||(43959607-43959667)
chr8 (458-521)||(8410463-8410526)
chr8 (377-436)||(9770967-9771026)
chr8 (370-433)||(16362144-16362207)
chr8 (400-433)||(4302813-4302846)
chr8 (292-349)||(24475024-24475081)
chr8 (371-431)||(2705016-2705076)
chr8 (461-509)||(9770497-9770545)
chr8 (400-436)||(37567365-37567401)
chr8 (371-431)||(41479046-41479106)
[»] chr5 (44 HSPs)
chr5 (371-592)||(4240446-4240667)
chr5 (371-592)||(5949100-5949320)
chr5 (371-592)||(1461132-1461353)
chr5 (371-592)||(40013696-40013917)
chr5 (371-592)||(1152087-1152318)
chr5 (371-592)||(14000089-14000320)
chr5 (370-592)||(13925921-13926153)
chr5 (371-587)||(4550246-4550472)
chr5 (380-592)||(7947557-7947779)
chr5 (371-583)||(22746288-22746502)
chr5 (371-592)||(37013905-37014116)
chr5 (407-592)||(39852372-39852567)
chr5 (371-582)||(21147058-21147279)
chr5 (371-568)||(5272927-5273134)
chr5 (375-510)||(14465303-14465438)
chr5 (370-568)||(139263-139471)
chr5 (371-582)||(33656035-33656258)
chr5 (371-568)||(7016747-7016954)
chr5 (377-582)||(9220711-9220916)
chr5 (371-521)||(32157962-32158113)
chr5 (371-521)||(27459015-27459164)
chr5 (263-349)||(17064370-17064456)
chr5 (377-520)||(6460789-6460932)
chr5 (405-557)||(849172-849334)
chr5 (267-349)||(20983006-20983088)
chr5 (260-348)||(37976598-37976686)
chr5 (371-431)||(5273116-5273176)
chr5 (374-510)||(9689654-9689787)
chr5 (371-433)||(16894055-16894117)
chr5 (263-349)||(41910871-41910957)
chr5 (371-436)||(5273153-5273218)
chr5 (371-433)||(1152298-1152360)
chr5 (371-433)||(4550452-4550514)
chr5 (371-433)||(14000300-14000362)
chr5 (371-433)||(37013863-37013925)
chr5 (371-433)||(40013897-40013959)
chr5 (502-582)||(27458944-27459024)
chr5 (371-431)||(33656240-33656300)
chr5 (370-433)||(4240647-4240710)
chr5 (370-433)||(5949057-5949120)
chr5 (372-431)||(21147017-21147076)
chr5 (477-519)||(1511409-1511451)
chr5 (403-436)||(26806578-26806611)
chr5 (400-436)||(17518474-17518510)
[»] chr2 (85 HSPs)
chr2 (371-592)||(28740280-28740501)
chr2 (371-592)||(10657398-10657629)
chr2 (371-591)||(13833420-13833640)
chr2 (371-592)||(28844547-28844778)
chr2 (371-592)||(33135615-33135845)
chr2 (372-592)||(25288152-25288382)
chr2 (377-592)||(18177265-18177490)
chr2 (377-592)||(3463669-3463885)
chr2 (371-550)||(7026596-7026775)
chr2 (370-592)||(10125287-10125511)
chr2 (370-591)||(3574838-3575049)
chr2 (372-592)||(6224554-6224765)
chr2 (371-592)||(26788776-26789006)
chr2 (371-591)||(378929-379149)
chr2 (371-592)||(215225-215443)
chr2 (371-582)||(22551760-22551981)
chr2 (371-582)||(16269683-16269904)
chr2 (371-582)||(24776347-24776568)
chr2 (371-582)||(12407372-12407593)
chr2 (371-582)||(20605228-20605449)
chr2 (371-582)||(31170621-31170842)
chr2 (371-582)||(14198574-14198795)
chr2 (371-582)||(43847638-43847859)
chr2 (371-568)||(305476-305683)
chr2 (370-582)||(35317053-35317275)
chr2 (371-582)||(5093044-5093265)
chr2 (371-521)||(44765767-44765917)
chr2 (469-592)||(43078653-43078786)
chr2 (370-536)||(26601253-26601419)
chr2 (261-349)||(36836326-36836414)
chr2 (371-521)||(1789434-1789584)
chr2 (263-345)||(5039471-5039553)
chr2 (263-349)||(36380131-36380217)
chr2 (263-349)||(40156087-40156173)
chr2 (263-349)||(44650440-44650526)
chr2 (263-349)||(45136969-45137055)
chr2 (371-568)||(32125242-32125452)
chr2 (263-349)||(2754050-2754136)
chr2 (263-349)||(17136434-17136520)
chr2 (263-349)||(558438-558524)
chr2 (263-349)||(3200928-3201014)
chr2 (263-349)||(10745231-10745317)
chr2 (371-433)||(20605144-20605206)
chr2 (261-349)||(33066637-33066725)
chr2 (263-349)||(25987660-25987747)
chr2 (263-349)||(21637944-21638030)
chr2 (273-349)||(6672802-6672878)
chr2 (533-592)||(7027051-7027110)
chr2 (263-349)||(2357075-2357160)
chr2 (263-349)||(26690201-26690287)
chr2 (455-508)||(21370631-21370684)
chr2 (261-349)||(21487195-21487284)
chr2 (372-582)||(9120119-9120339)
chr2 (371-431)||(12407330-12407390)
chr2 (264-328)||(13047156-13047220)
chr2 (371-433)||(7026554-7026616)
chr2 (371-433)||(26788734-26788796)
chr2 (371-436)||(13833617-13833682)
chr2 (371-431)||(24776305-24776365)
chr2 (261-349)||(30372677-30372765)
chr2 (371-433)||(215423-215485)
chr2 (371-433)||(28844505-28844567)
chr2 (371-435)||(19145015-19145082)
chr2 (371-431)||(5093247-5093307)
chr2 (400-436)||(11534881-11534917)
chr2 (371-431)||(16269641-16269701)
chr2 (371-431)||(20605102-20605162)
chr2 (371-431)||(20605186-20605246)
chr2 (371-431)||(22551963-22552023)
chr2 (400-436)||(34028935-34028971)
chr2 (370-433)||(3574796-3574859)
chr2 (378-433)||(10125490-10125545)
chr2 (374-433)||(33135576-33135635)
chr2 (263-309)||(2098825-2098871)
chr2 (263-349)||(7860145-7860231)
chr2 (371-429)||(14198779-14198836)
chr2 (371-433)||(28740481-28740543)
chr2 (371-429)||(32125200-32125258)
chr2 (371-431)||(1789392-1789452)
chr2 (404-436)||(7026545-7026577)
chr2 (400-436)||(20157759-20157795)
chr2 (400-436)||(24193595-24193631)
chr2 (371-431)||(31170824-31170884)
chr2 (371-431)||(35317012-35317072)
chr2 (371-431)||(44765725-44765785)
[»] chr7 (114 HSPs)
chr7 (370-592)||(44121894-44122116)
chr7 (371-592)||(18838374-18838605)
chr7 (371-592)||(40460701-40460922)
chr7 (375-592)||(46405425-46405642)
chr7 (371-592)||(509641-509862)
chr7 (371-592)||(3022911-3023142)
chr7 (371-592)||(23101283-23101514)
chr7 (370-592)||(29585499-29585720)
chr7 (370-592)||(9882221-9882452)
chr7 (371-592)||(37327912-37328133)
chr7 (371-592)||(28342332-28342563)
chr7 (371-592)||(39784084-39784315)
chr7 (371-592)||(39028082-39028303)
chr7 (371-592)||(29614748-29614979)
chr7 (373-592)||(7993129-7993358)
chr7 (371-588)||(28034793-28035020)
chr7 (375-567)||(33892269-33892461)
chr7 (371-591)||(33382622-33382852)
chr7 (379-590)||(8675326-8675547)
chr7 (371-592)||(44256750-44256981)
chr7 (371-592)||(12740358-12740588)
chr7 (371-557)||(19251524-19251710)
chr7 (371-582)||(17001037-17001238)
chr7 (377-591)||(3797052-3797266)
chr7 (370-582)||(973175-973397)
chr7 (371-591)||(10068451-10068682)
chr7 (371-573)||(47066688-47066881)
chr7 (374-542)||(32883770-32883948)
chr7 (377-583)||(9179871-9180077)
chr7 (377-582)||(40996643-40996858)
chr7 (371-582)||(47914258-47914479)
chr7 (371-568)||(43581098-43581305)
chr7 (371-582)||(7719254-7719475)
chr7 (371-582)||(44343390-44343611)
chr7 (371-592)||(41827299-41827520)
chr7 (371-591)||(12963686-12963911)
chr7 (371-582)||(12893400-12893621)
chr7 (371-582)||(30440788-30441009)
chr7 (371-582)||(18914729-18914950)
chr7 (461-582)||(19810874-19810995)
chr7 (371-582)||(34695265-34695486)
chr7 (371-582)||(47879160-47879381)
chr7 (502-592)||(37972851-37972941)
chr7 (368-567)||(44623295-44623494)
chr7 (377-568)||(20275271-20275472)
chr7 (371-557)||(727504-727691)
chr7 (261-349)||(37095207-37095295)
chr7 (263-349)||(35109738-35109824)
chr7 (399-582)||(7718356-7718549)
chr7 (264-349)||(38265237-38265322)
chr7 (458-592)||(43187341-43187485)
chr7 (371-508)||(10676498-10676635)
chr7 (263-349)||(245263-245349)
chr7 (267-349)||(16059356-16059438)
chr7 (371-482)||(29893066-29893177)
chr7 (371-521)||(34009004-34009155)
chr7 (371-521)||(25805677-25805827)
chr7 (261-349)||(34721881-34721969)
chr7 (263-349)||(21577097-21577183)
chr7 (371-524)||(31638867-31639020)
chr7 (263-349)||(41151219-41151306)
chr7 (267-349)||(18116947-18117029)
chr7 (267-349)||(38405157-38405239)
chr7 (371-582)||(39219371-39219592)
chr7 (371-433)||(48117746-48117808)
chr7 (457-582)||(32142911-32143046)
chr7 (454-510)||(447851-447907)
chr7 (255-349)||(12472168-12472261)
chr7 (371-433)||(28342290-28342352)
chr7 (263-349)||(45278499-45278585)
chr7 (370-433)||(8078386-8078450)
chr7 (457-521)||(43679492-43679556)
chr7 (261-349)||(28407555-28407639)
chr7 (371-433)||(23101241-23101303)
chr7 (370-436)||(28034997-28035062)
chr7 (371-433)||(29614959-29615021)
chr7 (371-433)||(34695181-34695243)
chr7 (372-433)||(39784043-39784104)
chr7 (371-436)||(41827257-41827322)
chr7 (269-349)||(11216816-11216896)
chr7 (371-431)||(20275460-20275520)
chr7 (261-349)||(23028730-23028818)
chr7 (377-440)||(10616940-10617002)
chr7 (371-426)||(43187545-43187600)
chr7 (371-510)||(1470309-1470447)
chr7 (371-433)||(12963644-12963706)
chr7 (371-433)||(17001218-17001280)
chr7 (371-429)||(18914934-18914992)
chr7 (371-433)||(19251482-19251544)
chr7 (371-433)||(37327870-37327932)
chr7 (371-433)||(48117788-48117850)
chr7 (457-582)||(7113530-7113665)
chr7 (371-431)||(12893358-12893418)
chr7 (371-431)||(30440746-30440806)
chr7 (371-431)||(34695223-34695283)
chr7 (400-436)||(40097140-40097176)
chr7 (371-431)||(43581287-43581347)
chr7 (371-431)||(44343593-44343653)
chr7 (371-431)||(47879118-47879178)
chr7 (371-431)||(47914216-47914276)
chr7 (374-433)||(9882431-9882490)
chr7 (553-592)||(32883944-32883983)
chr7 (371-433)||(7993085-7993147)
chr7 (371-433)||(10068409-10068471)
chr7 (371-433)||(39028040-39028102)
chr7 (368-425)||(10068491-10068548)
chr7 (372-429)||(31638826-31638883)
chr7 (374-431)||(34008965-34009022)
chr7 (372-433)||(46405626-46405687)
chr7 (371-431)||(973134-973194)
chr7 (404-436)||(3022902-3022934)
chr7 (400-436)||(39301247-39301283)
chr7 (371-431)||(40996846-40996906)
chr7 (372-436)||(44256958-44257022)
[»] chr4 (126 HSPs)
chr4 (371-592)||(23987204-23987425)
chr4 (371-592)||(30967294-30967515)
chr4 (376-592)||(49501504-49501722)
chr4 (376-592)||(49507569-49507787)
chr4 (370-592)||(51320910-51321142)
chr4 (371-592)||(5441394-5441625)
chr4 (371-592)||(27768046-27768277)
chr4 (374-592)||(54341137-54341365)
chr4 (371-592)||(54853453-54853684)
chr4 (371-591)||(37828388-37828618)
chr4 (371-592)||(37915817-37916048)
chr4 (371-592)||(32683993-32684203)
chr4 (372-589)||(32322082-32322309)
chr4 (371-592)||(49834818-49835029)
chr4 (371-592)||(12913214-12913435)
chr4 (370-592)||(5799966-5800189)
chr4 (374-579)||(50018244-50018449)
chr4 (405-591)||(28483923-28484108)
chr4 (371-591)||(36479228-36479447)
chr4 (377-582)||(46635643-46635852)
chr4 (458-586)||(56445346-56445474)
chr4 (371-582)||(41881077-41881299)
chr4 (391-521)||(29649733-29649863)
chr4 (371-582)||(31314737-31314944)
chr4 (371-568)||(41725115-41725319)
chr4 (377-582)||(1112889-1113104)
chr4 (379-579)||(55302841-55303051)
chr4 (371-582)||(12112935-12113156)
chr4 (371-582)||(25331121-25331342)
chr4 (455-592)||(48261201-48261348)
chr4 (371-568)||(40537169-40537361)
chr4 (372-582)||(34228578-34228798)
chr4 (371-568)||(22202005-22202212)
chr4 (371-582)||(7007364-7007585)
chr4 (371-521)||(9163066-9163216)
chr4 (371-521)||(28541688-28541838)
chr4 (371-582)||(32950831-32951052)
chr4 (371-582)||(39479350-39479573)
chr4 (371-592)||(44770841-44771070)
chr4 (371-521)||(19740974-19741124)
chr4 (255-349)||(36192588-36192682)
chr4 (371-582)||(30009672-30009893)
chr4 (371-568)||(1044799-1045004)
chr4 (261-349)||(30970381-30970469)
chr4 (377-521)||(25446047-25446190)
chr4 (370-440)||(20021333-20021403)
chr4 (502-591)||(8711997-8712086)
chr4 (370-568)||(39307262-39307470)
chr4 (371-568)||(3436583-3436790)
chr4 (371-582)||(37046445-37046668)
chr4 (371-510)||(28370914-28371053)
chr4 (267-349)||(46494401-46494483)
chr4 (261-340)||(22304088-22304167)
chr4 (263-349)||(29576462-29576548)
chr4 (267-349)||(51066540-51066622)
chr4 (261-349)||(7173582-7173670)
chr4 (502-586)||(24736466-24736550)
chr4 (405-582)||(42786708-42786895)
chr4 (371-433)||(24131126-24131188)
chr4 (371-444)||(11090339-11090412)
chr4 (371-521)||(25504705-25504855)
chr4 (371-521)||(53275829-53275979)
chr4 (261-349)||(39863775-39863863)
chr4 (377-501)||(23464951-23465075)
chr4 (457-589)||(41320886-41321030)
chr4 (393-568)||(41581798-41581982)
chr4 (263-349)||(51713964-51714050)
chr4 (263-349)||(55231734-55231820)
chr4 (263-332)||(2570265-2570334)
chr4 (495-587)||(11090428-11090520)
chr4 (371-433)||(27768004-27768066)
chr4 (263-349)||(32139211-32139297)
chr4 (371-433)||(37915775-37915837)
chr4 (266-348)||(51279035-51279117)
chr4 (371-436)||(37915733-37915798)
chr4 (457-521)||(7249831-7249895)
chr4 (503-590)||(36727937-36728023)
chr4 (371-433)||(5441352-5441414)
chr4 (371-433)||(30967495-30967557)
chr4 (267-349)||(41523444-41523526)
chr4 (263-349)||(50905795-50905881)
chr4 (371-431)||(41881281-41881341)
chr4 (263-346)||(676778-676861)
chr4 (263-349)||(4080551-4080637)
chr4 (371-433)||(7249926-7249988)
chr4 (268-326)||(37990599-37990657)
chr4 (371-433)||(40537341-40537403)
chr4 (371-433)||(54341092-54341154)
chr4 (371-433)||(54853664-54853726)
chr4 (304-349)||(8740495-8740540)
chr4 (371-431)||(1044758-1044817)
chr4 (371-431)||(19741106-19741166)
chr4 (371-431)||(20021292-20021352)
chr4 (371-431)||(24131170-24131230)
chr4 (371-431)||(25331079-25331139)
chr4 (371-431)||(25504837-25504897)
chr4 (371-431)||(28541646-28541706)
chr4 (376-428)||(29855676-29855728)
chr4 (371-431)||(32951034-32951094)
chr4 (371-431)||(37046650-37046710)
chr4 (371-431)||(39479555-39479615)
chr4 (400-436)||(40143822-40143858)
chr4 (389-433)||(41320786-41320830)
chr4 (400-436)||(54509760-54509796)
chr4 (267-322)||(2294719-2294774)
chr4 (270-349)||(28202703-28202782)
chr4 (370-433)||(32322038-32322101)
chr4 (370-433)||(51320868-51320931)
chr4 (502-556)||(19740929-19740983)
chr4 (452-510)||(27454155-27454213)
chr4 (371-433)||(37828598-37828660)
chr4 (371-425)||(42786716-42786770)
chr4 (263-349)||(47626992-47627078)
chr4 (371-433)||(49835009-49835071)
chr4 (371-433)||(50018199-50018261)
chr4 (267-328)||(23084468-23084529)
chr4 (502-582)||(24130976-24131057)
chr4 (403-436)||(28100584-28100617)
chr4 (403-436)||(50018189-50018222)
chr4 (370-422)||(467830-467882)
chr4 (370-431)||(7007320-7007382)
chr4 (371-431)||(22201963-22202023)
chr4 (400-436)||(26336123-26336159)
chr4 (370-422)||(29649874-29649926)
chr4 (392-436)||(41762017-41762061)
chr4 (400-436)||(47685190-47685226)
[»] chr1 (93 HSPs)
chr1 (371-592)||(38536084-38536305)
chr1 (371-592)||(38558302-38558523)
chr1 (371-592)||(29219272-29219491)
chr1 (371-592)||(48177447-48177678)
chr1 (370-592)||(6312557-6312789)
chr1 (374-592)||(29396373-29396601)
chr1 (371-592)||(51701564-51701795)
chr1 (371-592)||(25612141-25612372)
chr1 (371-592)||(18798475-18798686)
chr1 (370-591)||(9322486-9322717)
chr1 (371-592)||(15835038-15835269)
chr1 (371-592)||(46328026-46328257)
chr1 (370-592)||(48668770-48668989)
chr1 (371-566)||(5495117-5495312)
chr1 (374-592)||(28387378-28387606)
chr1 (371-592)||(45272571-45272790)
chr1 (371-509)||(49230870-49231008)
chr1 (370-568)||(21222130-21222338)
chr1 (371-568)||(35279656-35279863)
chr1 (371-582)||(19451803-19452024)
chr1 (371-591)||(9577418-9577648)
chr1 (371-582)||(28824368-28824588)
chr1 (371-580)||(35679125-35679344)
chr1 (371-567)||(50192560-50192767)
chr1 (371-582)||(45760004-45760226)
chr1 (377-589)||(33025502-33025716)
chr1 (371-582)||(49198264-49198484)
chr1 (371-557)||(45535928-45536124)
chr1 (372-582)||(6304247-6304468)
chr1 (368-582)||(47654346-47654571)
chr1 (371-582)||(47780695-47780916)
chr1 (371-521)||(730132-730283)
chr1 (370-440)||(8141275-8141345)
chr1 (267-349)||(30054445-30054527)
chr1 (371-589)||(37014628-37014856)
chr1 (264-349)||(22024150-22024235)
chr1 (265-349)||(30370061-30370145)
chr1 (374-567)||(32588963-32589166)
chr1 (371-568)||(49418068-49418275)
chr1 (263-349)||(20014505-20014591)
chr1 (273-349)||(35371754-35371830)
chr1 (371-545)||(48524303-48524487)
chr1 (371-519)||(29556088-29556236)
chr1 (263-349)||(12025228-12025314)
chr1 (263-349)||(14498078-14498164)
chr1 (267-349)||(21090162-21090244)
chr1 (263-349)||(45324053-45324139)
chr1 (370-431)||(22183353-22183414)
chr1 (371-543)||(47784371-47784542)
chr1 (371-433)||(953803-953865)
chr1 (455-568)||(31572206-31572329)
chr1 (263-349)||(33762539-33762625)
chr1 (267-337)||(35618034-35618104)
chr1 (265-349)||(30850841-30850925)
chr1 (455-519)||(31622527-31622591)
chr1 (263-349)||(4573426-4573512)
chr1 (371-433)||(15835249-15835311)
chr1 (371-433)||(19452046-19452108)
chr1 (371-433)||(25612099-25612161)
chr1 (460-533)||(955823-955896)
chr1 (264-349)||(33763254-33763339)
chr1 (371-415)||(14494193-14494237)
chr1 (371-431)||(28824570-28824630)
chr1 (371-431)||(49198466-49198525)
chr1 (370-433)||(51701521-51701584)
chr1 (371-433)||(18798433-18798495)
chr1 (371-433)||(29219230-29219292)
chr1 (399-436)||(10896845-10896882)
chr1 (372-433)||(49230829-49230890)
chr1 (371-431)||(730090-730150)
chr1 (371-431)||(953761-953821)
chr1 (400-436)||(1928406-1928442)
chr1 (371-431)||(14494151-14494211)
chr1 (264-324)||(17015192-17015252)
chr1 (371-431)||(19452006-19452066)
chr1 (371-431)||(35679326-35679386)
chr1 (400-436)||(36402293-36402329)
chr1 (371-431)||(50192749-50192809)
chr1 (371-433)||(6312516-6312578)
chr1 (371-433)||(8141324-8141386)
chr1 (371-425)||(22183396-22183450)
chr1 (371-433)||(29396584-29396646)
chr1 (374-431)||(28387591-28387648)
chr1 (370-431)||(29556045-29556106)
chr1 (457-510)||(51085865-51085918)
chr1 (371-431)||(22183312-22183372)
chr1 (400-436)||(29208801-29208837)
chr1 (400-436)||(33243312-33243348)
chr1 (400-436)||(33263485-33263521)
chr1 (371-431)||(35279614-35279674)
chr1 (403-435)||(42657763-42657795)
chr1 (371-431)||(45760208-45760268)
chr1 (376-436)||(48524266-48524326)
[»] scaffold0306 (1 HSPs)
scaffold0306 (371-592)||(13873-14094)
[»] scaffold0152 (2 HSPs)
scaffold0152 (371-592)||(21233-21454)
scaffold0152 (492-592)||(28463-28564)
[»] chr6 (34 HSPs)
chr6 (371-591)||(30385054-30385272)
chr6 (371-592)||(31895686-31895917)
chr6 (371-592)||(14262417-14262648)
chr6 (371-592)||(34759034-34759266)
chr6 (371-568)||(34773399-34773606)
chr6 (455-592)||(31067567-31067704)
chr6 (374-592)||(7497069-7497296)
chr6 (472-592)||(4200421-4200541)
chr6 (371-582)||(6197472-6197693)
chr6 (371-568)||(2300746-2300953)
chr6 (371-523)||(7051835-7051987)
chr6 (371-566)||(1391614-1391819)
chr6 (264-349)||(19686827-19686912)
chr6 (371-513)||(3848202-3848342)
chr6 (263-349)||(20685372-20685458)
chr6 (263-349)||(35163749-35163835)
chr6 (377-562)||(28002661-28002856)
chr6 (371-519)||(29076588-29076737)
chr6 (371-519)||(29111561-29111711)
chr6 (263-349)||(17948727-17948813)
chr6 (372-481)||(656957-657065)
chr6 (267-349)||(15070172-15070254)
chr6 (371-433)||(14262628-14262690)
chr6 (263-349)||(14505524-14505608)
chr6 (371-433)||(31895644-31895706)
chr6 (371-433)||(34773357-34773419)
chr6 (373-429)||(3848114-3848170)
chr6 (263-349)||(2711739-2711819)
chr6 (371-431)||(1391572-1391632)
chr6 (371-431)||(2300935-2300995)
chr6 (400-436)||(10644016-10644052)
chr6 (400-436)||(30877898-30877934)
chr6 (372-431)||(6197675-6197734)
chr6 (371-425)||(7497108-7497162)
[»] scaffold0543 (2 HSPs)
scaffold0543 (371-592)||(10551-10782)
scaffold0543 (371-433)||(10509-10571)
[»] scaffold0110 (1 HSPs)
scaffold0110 (370-592)||(39602-39834)
[»] scaffold1504 (2 HSPs)
scaffold1504 (371-582)||(854-1075)
scaffold1504 (371-433)||(812-874)
[»] scaffold0042 (1 HSPs)
scaffold0042 (371-592)||(58061-58292)
[»] scaffold0347 (1 HSPs)
scaffold0347 (488-592)||(14878-14982)
[»] scaffold0922 (3 HSPs)
scaffold0922 (371-510)||(4191-4330)
scaffold0922 (371-433)||(4149-4211)
scaffold0922 (399-436)||(4135-4172)
[»] scaffold0037 (1 HSPs)
scaffold0037 (371-568)||(100202-100409)
[»] scaffold0400 (2 HSPs)
scaffold0400 (371-582)||(15028-15249)
scaffold0400 (371-431)||(15231-15291)
[»] scaffold0365 (2 HSPs)
scaffold0365 (371-582)||(15671-15892)
scaffold0365 (371-431)||(15874-15934)
[»] scaffold0004 (1 HSPs)
scaffold0004 (370-582)||(102083-102307)
[»] scaffold0054 (2 HSPs)
scaffold0054 (459-579)||(36905-37035)
scaffold0054 (371-425)||(37027-37081)
[»] scaffold0113 (1 HSPs)
scaffold0113 (371-566)||(38906-39111)
[»] scaffold0839 (1 HSPs)
scaffold0839 (502-592)||(3677-3767)
[»] scaffold0151 (1 HSPs)
scaffold0151 (405-582)||(38600-38786)
[»] scaffold0276 (2 HSPs)
scaffold0276 (371-501)||(625-755)
scaffold0276 (371-431)||(737-797)
[»] scaffold0021 (1 HSPs)
scaffold0021 (261-349)||(107689-107776)
[»] scaffold0010 (5 HSPs)
scaffold0010 (371-438)||(233728-233795)
scaffold0010 (371-438)||(234576-234643)
scaffold0010 (371-438)||(222560-222627)
scaffold0010 (371-433)||(233686-233748)
scaffold0010 (371-433)||(234534-234596)
[»] scaffold0691 (1 HSPs)
scaffold0691 (297-349)||(7002-7054)
[»] scaffold0651 (1 HSPs)
scaffold0651 (371-411)||(8753-8793)


Alignment Details
Target: chr3 (Bit Score: 492; Significance: 0; HSPs: 122)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 492; E-Value: 0
Query Start/End: Original strand, 8 - 592
Target Start/End: Original strand, 37454488 - 37455072
Alignment:
Q  8 gaaagagaggagaaagatctaatagatgctgcaataatgactaattcaatattccaacatggaaagagaggagaaagatctaagcatgtgtaatagtaaa 107  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37454488 gaaagagaggagaaagatctaatagatgttgcaataatgactaattcaatattccaacatggaaagagaggagaaagatctaagcatgtgtaatagtaaa 37454587  T
Q  108 gaaagattattaccatggtgcgttaattagaggttttaatggaacatgacttgaccttagttgttccagacatctccttttcgacagcattttttctagc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37454588 gaaagattattaccatggtgcgttaattagaggttttaatggaacatgacttgaccttagttgttccagacatctccttttcgacagcattttttctagc 37454687  T
Q  208 ctcttctttttgtcacatagctttaggggatgtattggannnnnnnnggttacacaaaattttagggtgaggggatggtgccccaatctaaggtaaggaa 307  Q
    |||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  37454688 ctcttctttttgtcacatagctttaggggatgtattggattttttttggttacacaaaattttagggtgaggggatggtgccccaatctaaggtagggaa 37454787  T
Q  308 gatcttcgggctcaaagagcatttacaaaggtaattacattttttgcatatttaaaattatctttgtggtattcaatcaagattctttgtcattttaaaa 407  Q
    || |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37454788 gaccttcgggctcaaagagcacttacaaaggtaattatattttttgcatatttaaaattatctttgtggtattcaatcaagattctttgtcattttaaaa 37454887  T
Q  408 aagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcattcaaatttcgaattattgtttaataaattggatt 507  Q
    |||||||||| ||||||||||||||||||||||  ||       || |||||||||||||||||||||||||||||||| |||||||||||||||| |||    
T  37454888 aagtcttgagatattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattgaatt 37454987  T
Q  508 ttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcctgagattgtttttcttttaaaag 592  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  37454988 ttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcttgagattgtttttcttttaaaag 37455072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 371 - 592
Target Start/End: Complemental strand, 10728857 - 10728636
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||       || |||||||||| |||||    
T  10728857 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtcttgtggtatttaaaat 10728758  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
    ||||||||||| |||  |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |    
T  10728757 cattcaaatttggaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 10728658  T
Q  571 gagattgtttttcttttaaaag 592  Q
    ||||||||||||||||||||||    
T  10728657 gagattgtttttcttttaaaag 10728636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 39038030 - 39038251
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||       || ||||||||| ||||||    
T  39038030 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactttaaaaaagtcttgtggtatccaaaat 39038129  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
    |||||||||||||||  |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |    
T  39038130 cattcaaatttcgaagaattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgagatttctt 39038229  T
Q  571 gagattgtttttcttttaaaag 592  Q
    || |||||||||||||||||||    
T  39038230 gaaattgtttttcttttaaaag 39038251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 371 - 592
Target Start/End: Complemental strand, 50762266 - 50762045
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||   ||       || ||||||||||||||||    
T  50762266 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgagatattcaatcatgacttttcataatttaaaaaaagtcttgtggtattcaaaat 50762167  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
    ||||| |||||||||| ||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |    
T  50762166 cattctaatttcgaatgattgtttgataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 50762067  T
Q  571 gagattgtttttcttttaaaag 592  Q
    ||||||||||||||||||||||    
T  50762066 gagattgtttttcttttaaaag 50762045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 371 - 592
Target Start/End: Complemental strand, 44906729 - 44906498
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||       || ||||||||||||||||    
T  44906729 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaat 44906630  T
Q  471 cattcaaatttcgaattattgtttaataaattgg----------attttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  |||||||||||||||||          |||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  44906629 cattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaaatgtctttcatgaaaagat 44906530  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||| |||||||||||||||||||||||    
T  44906529 gagatttcttgagattgtttttcttttaaaag 44906498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 17946278 - 17946509
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||       || | ||| ||||||||||    
T  17946278 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtgatattcaaaat 17946377  T
Q  471 cattcaaatttcgaattattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||| ||  ||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  17946378 cattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 17946477  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||| |||||||||||||||||||||||    
T  17946478 gagatttcttgagattgtttttcttttaaaag 17946509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 371 - 592
Target Start/End: Complemental strand, 34484246 - 34484015
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||       |||||||||||||||||||    
T  34484246 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattcaaaat 34484147  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  |||||||||||||||||||||||          ||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  34484146 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagat 34484047  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||| ||||||||||||| |||||||||    
T  34484046 gagatttcttgagattgtttttgttttaaaag 34484015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 371 - 592
Target Start/End: Complemental strand, 36674346 - 36674115
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||       || ||||||||||||||||    
T  36674346 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 36674247  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    ||||||||||| |||  |||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  36674246 cattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 36674147  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||| ||||||||||||| |||||||||    
T  36674146 gagatttcttgagattgtttttattttaaaag 36674115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 380 - 592
Target Start/End: Original strand, 26107260 - 26107482
Alignment:
Q  380 tcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcattcaaat 479  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||       || |||||||||||||||||||||||||    
T  26107260 tcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcaattaaaaaaagtcttgtggtattcaaaatcattcaaat 26107359  T
Q  480 ttcgaattattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcc 569  Q
    ||||||  ||||||||||||||||||          ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  26107360 ttcgaaggattgtttaataaattggattttgatggattttgtgtgattttgtagtgtaattttaacaagaaaaagtatttcataaaaagatgagatttct 26107459  T
Q  570 tgagattgtttttcttttaaaag 592  Q
    |||||||||||||||||||||||    
T  26107460 tgagattgtttttcttttaaaag 26107482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 11431516 - 11431747
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||       || ||||||||||||||||    
T  11431516 ttgtggtattcaataaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 11431615  T
Q  471 cattcaaatttcgaattattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||| ||||||||||  ||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11431616 catttaaatttcgaaggattgtttaataaattggattttggtggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 11431715  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||| ||||||||||||| |||||||||    
T  11431716 gagatttcttgagattgtttttattttaaaag 11431747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 52810368 - 52810599
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||  ||       || ||||||||||||||||    
T  52810368 ttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 52810467  T
Q  471 cattcaaatttcgaattattgtttaataaattg----------gattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    ||||||||||| |||| ||||||||||||||||          |||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||    
T  52810468 cattcaaattttgaatgattgtttaataaattgaattttgatggattttgtgggattttgtagcgtaattttaacaagaaaaaatctttcatgaaaagat 52810567  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||| |||||||||||||||||||||||    
T  52810568 gagatttcttgagattgtttttcttttaaaag 52810599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 371 - 587
Target Start/End: Original strand, 40897134 - 40897360
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||       || || |||||||||||||    
T  40897134 ttgtggtattcattcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttatggtattcaaaat 40897233  T
Q  471 cattcaaatttcgaattattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||||||          |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  40897234 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagat 40897333  T
Q  561 gagatttcctgagattgtttttctttt 587  Q
    |||||||| ||| ||||||||||||||    
T  40897334 gagatttcttgatattgtttttctttt 40897360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 371 - 592
Target Start/End: Complemental strand, 23753602 - 23753392
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||       || ||||||||||||||||    
T  23753602 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 23753503  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
    |||||||||||||||  |||||||||||||||          ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |    
T  23753502 cattcaaatttcgaaggattgtttaataaatt----------ggattttgtagtgtaattttaacaagaaaaagtctttcatg-aaagatgagatttctt 23753414  T
Q  571 gagattgtttttcttttaaaag 592  Q
    |||||||||||| |||||||||    
T  23753413 gagattgtttttgttttaaaag 23753392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 379 - 590
Target Start/End: Original strand, 48379155 - 48379376
Alignment:
Q  379 ttcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcattcaaa 478  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |||       || ||||||||||||||||||||||||    
T  48379155 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatctagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaa 48379254  T
Q  479 tttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttc 568  Q
    |||||||  ||||||||||||||          ||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||| |||||||    
T  48379255 tttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaaatgtctttcatgaaaagatcagatttc 48379354  T
Q  569 ctgagattgtttttcttttaaa 590  Q
     |||||||||||||||||||||    
T  48379355 ttgagattgtttttcttttaaa 48379376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 370 - 591
Target Start/End: Original strand, 32580166 - 32580396
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaa 469  Q
    |||||||||||| ||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||  ||       || |||||||||||||||    
T  32580166 tttgtggtattcgatcaaggctctttgtcattttaaaaaagtcttgaggtattcaat-aagacttttcatcatttaaaaaaagtcttgtggtattcaaaa 32580264  T
Q  470 tcattcaaatttcgaattattgtttaataaattggattttgt----------gggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaaga 559  Q
    ||||||||||||||||  |||||||||||||||||||||||           |||||||||||||||||||||||||||||||||| |||||||||||||    
T  32580265 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgagggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 32580364  T
Q  560 tgagatttcctgagattgtttttcttttaaaa 591  Q
    ||||||||| ||||||||||||| ||||||||    
T  32580365 tgagatttcttgagattgtttttattttaaaa 32580396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 54628833 - 54629065
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngtt-ttgtggtattcaaaa 469  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |           | |||||||||||||||    
T  54628833 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacaaaaaaaaaaatcttgtggtattcaaaa 54628932  T
Q  470 tcattcaaatttcgaattattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaaga 559  Q
    ||||||||||||| ||  ||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  54628933 tcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaaga 54629032  T
Q  560 tgagatttcctgagattgtttttcttttaaaag 592  Q
    ||||||||| |||||||||||||||||| ||||    
T  54629033 tgagatttcttgagattgtttttcttttgaaag 54629065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 375 - 592
Target Start/End: Original strand, 18749606 - 18749833
Alignment:
Q  375 ggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcatt 474  Q
    ||||||||||||| | | ||  ||| |||||||||||||||||||||||||| || |||||||||| |||       || ||||||||||||||||||||    
T  18749606 ggtattcaatcaaaacttttcatcactttaaaaaagtcttgaggtattcaataaaaacttttcatcacttaaaaaaagtcttgtggtattcaaaatcatt 18749705  T
Q  475 caaatttcgaattattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgaga 564  Q
    |||||||||||  ||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18749706 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 18749805  T
Q  565 tttcctgagattgtttttcttttaaaag 592  Q
    |||| |||||||||||||||||||||||    
T  18749806 tttcttgagattgtttttcttttaaaag 18749833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 372 - 592
Target Start/End: Complemental strand, 52618180 - 52617956
Alignment:
Q  372 tgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatc 471  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||       || |||||||||||||||||    
T  52618180 tgtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatc 52618081  T
Q  472 attcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatg 561  Q
    ||||||||||||||  ||||||||||||||          ||||||||||||||||||||||||||||||||||      |||| |||||| ||||||||    
T  52618080 attcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaac------aagtctttcataaaaagatg 52617987  T
Q  562 agatttcctgagattgtttttcttttaaaag 592  Q
    ||||||| |||||||||||||||||||||||    
T  52617986 agatttcttgagattgtttttcttttaaaag 52617956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 10660525 - 10660732
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||       || ||||||||||||||||    
T  10660525 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtattgtggtattcaaaat 10660624  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
    |||||||||||||||  |||||||||||||||||||||||  |||||||||||||||||||||||||              ||||||||||||||||| |    
T  10660625 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaa--------------tgaaaagatgagatttctt 10660710  T
Q  571 gagattgtttttcttttaaaag 592  Q
    |||||||||||| |||||||||    
T  10660711 gagattgtttttattttaaaag 10660732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 371 - 586
Target Start/End: Complemental strand, 51737943 - 51737717
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaa-gtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaa 469  Q
    ||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||       || |||||||||||||||    
T  51737943 ttgtggtattcaatcaagactctttatcattttaaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaa 51737844  T
Q  470 tcattcaaatttcgaattattgtttaataaattggat----------tttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaaga 559  Q
    ||||||||||||||||  |||||||||||||||||||          ||||||||||||||| ||||||||||||||||||||||| |||||| ||||||    
T  51737843 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaaaagtctttcataaaaaga 51737744  T
Q  560 tgagatttcctgagattgtttttcttt 586  Q
    | ||  ||| |||||||||||||||||    
T  51737743 taagtattcttgagattgtttttcttt 51737717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 374 - 592
Target Start/End: Complemental strand, 31646497 - 31646271
Alignment:
Q  374 tggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcat 473  Q
    |||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||  ||        | |||||||||||||||||||    
T  31646497 tggtattcaatcaagactctttgttattttaaaaaagtcttgacgtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaaatcat 31646398  T
Q  474 tcaaatttcgaattattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgag 563  Q
    ||||||||||||  |||||||||| ||||||||||||          ||||||||||||||||||||||||||||||||||| ||||||||||  |||||    
T  31646397 tcaaatttcgaaagattgtttaatgaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa--atgag 31646300  T
Q  564 atttcctgagattgtttttcttttaaaag 592  Q
    ||||| |||||||||| ||||||||||||    
T  31646299 atttcttgagattgttattcttttaaaag 31646271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 44276379 - 44276596
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    |||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||| |||||||| |||       || |  |||||||||||||    
T  44276379 ttgtggtattcaattaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcatggtattcaaaat 44276478  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
    ||||||||||  ||    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| | ||||||||| | |||||||||  |    
T  44276479 cattcaaattagga----ttgtttaataaattggattttgtgggattttctagtgaaattttaacaagaaaaaatctttcatgaagacatgagatttttt 44276574  T
Q  571 gagattgtttttcttttaaaag 592  Q
    | |||| |||||||||||||||    
T  44276575 gggattatttttcttttaaaag 44276596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 373 - 566
Target Start/End: Original strand, 20832984 - 20833187
Alignment:
Q  373 gtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatca 472  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||       || ||||||||||||||||||    
T  20832984 gtggtatttaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagaattttcatcacttaaaaaaagtcttgtggtattcaaaatca 20833083  T
Q  473 ttcaaatttcgaattattgtttaataaattggattttgtgggattttg----------tagtgtaattttaacaagaaaaagtatttcatgaaaagatga 562  Q
    ||||||||  |||  |||||||||||||||||||||||  ||||||||          |||||||||||||||||||||||||||||||||||||||| |    
T  20833084 ttcaaattcggaaggattgtttaataaattggattttgatggattttgtgagatttattagtgtaattttaacaagaaaaagtatttcatgaaaagataa 20833183  T
Q  563 gatt 566  Q
    ||||    
T  20833184 gatt 20833187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 374 - 591
Target Start/End: Complemental strand, 6035266 - 6035039
Alignment:
Q  374 tggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcat 473  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||       || | ||| |||||||||||||    
T  6035266 tggtattcaatcaagagtctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcgtgatattcaaaatcat 6035167  T
Q  474 tcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgag 563  Q
    ||||||||||||  | ||||||||||||          |||||||||||||||||| ||||  ||||||| || |||||||| |||||| |||| |||||    
T  6035166 tcaaatttcgaagcaatgtttaataaattagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcataaaaacatgag 6035067  T
Q  564 atttcctgagattgtttttcttttaaaa 591  Q
    ||||| | ||||||||||||||||||||    
T  6035066 atttcttaagattgtttttcttttaaaa 6035039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 461 - 592
Target Start/End: Complemental strand, 39842610 - 39842479
Alignment:
Q  461 tattcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||||||||||||  ||||||||||||||| |||||||  |||||||||| |||||||||||||||||||||| ||||||||||||||    
T  39842610 tattcaaaatcattcaaatttcgaagaattgtttaataaattagattttgacggattttgtaatgtaattttaacaagaaaaagtctttcatgaaaagat 39842511  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||| || ||||||||||||||||||||    
T  39842510 gagatttcttgggattgtttttcttttaaaag 39842479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 371 - 582
Target Start/End: Complemental strand, 50903459 - 50903235
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnn---gttttgtggtattcaa 467  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||  ||          || |||||||||||||    
T  50903459 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttaaggtattcaatcaagactttttatcatttaaaaaaaaaagtcttgtggtattcaa 50903360  T
Q  468 aatcattcaaatttcgaattattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaa 557  Q
    |||||||||||||  |||  |||||||||||||||||||||||          ||||||||||||||||||||||||||||||||| | ||| |||||||    
T  50903359 aatcattcaaattaagaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaa 50903260  T
Q  558 gatgagatttcctgagattgttttt 582  Q
     |||||||||| |||||||||||||    
T  50903259 tatgagatttcttgagattgttttt 50903235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 370 - 582
Target Start/End: Original strand, 20498198 - 20498420
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaa 469  Q
    |||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||| |||       || | |||||||||||||    
T  20498198 tttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaa 20498297  T
Q  470 tcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaaga 559  Q
    ||||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| |    
T  20498298 tcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaaca 20498397  T
Q  560 tgagatttcctgagattgttttt 582  Q
    ||||||||| |  ||||||||||    
T  20498398 tgagatttcttaggattgttttt 20498420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 371 - 582
Target Start/End: Original strand, 19253817 - 19254038
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||| |||       || | ||||||||||||||    
T  19253817 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 19253916  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||    
T  19253917 cattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 19254016  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| |  ||||||||||    
T  19254017 gagatttcttaggattgttttt 19254038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 386 - 592
Target Start/End: Complemental strand, 15493061 - 15492852
Alignment:
Q  386 aagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcattcaaatttcgaa 485  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||       || |  ||||||||||||||||||||||||  ||    
T  15493061 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaat-gtctcatggtattcaaaatcattcaaatttttaa 15492963  T
Q  486 tta----ttgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcctgagattgtttt 581  Q
    |||    || |||||||||||||||||||| |||| || ||||| ||||||||||||||||| | |||||||||   || ||||||| ||||||||||||    
T  15492962 ttaagaattatttaataaattggattttgtaggatattctagtgaaattttaacaagaaaaaatctttcatgaagtcataagatttcttgagattgtttt 15492863  T
Q  582 tcttttaaaag 592  Q
    | |||||||||    
T  15492862 tattttaaaag 15492852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 371 - 582
Target Start/End: Complemental strand, 996302 - 996081
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| ||||||||||||||||||| |||||| |||||||||||| ||||||||||||||| | || ||| |||       || | ||||||||||||||    
T  996302 ttgtgttattcaatcaagattctttatcatttcaaaaaagtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaat 996203  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||    
T  996202 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 996103  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| |  ||||||||||    
T  996102 gagatttcttaggattgttttt 996081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 371 - 582
Target Start/End: Complemental strand, 10139362 - 10139141
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||| || |||||| |||||||||||| ||||||||||||||||| || ||| |||       || | ||||||||||||||    
T  10139362 ttgtgttattcaatcaagattccttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 10139263  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||    
T  10139262 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 10139163  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| |  ||||||||||    
T  10139162 gagatttcttaggattgttttt 10139141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 371 - 557
Target Start/End: Original strand, 6975739 - 6975922
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||  ||       || ||||||||||||||||    
T  6975739 ttgtggtattcaatcaagactctttgttattttaaaa-agtcttgaggtattcaatcaagacttttcatcattt--aaaaagtcttgtggtattcaaaat 6975835  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaa 557  Q
    |||||||||||||||  ||| |||| ||||||||| ||||||||||||| ||||  ||||| | || |||| ||| |||||||||||    
T  6975836 cattcaaatttcgaagaattatttactaaattggaatttgtgggattttctagtaaaatttgagcatgaaacagtctttcatgaaaa 6975922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 371 - 582
Target Start/End: Complemental strand, 3999861 - 3999640
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||| |||        | | ||||||||||||||    
T  3999861 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaaaat 3999762  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| |||||||  | |||||||| |||||| |||| ||    
T  3999761 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagaatgaaaaagtctttcataaaaacat 3999662  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| |  ||||||||||    
T  3999661 gagatttcttaggattgttttt 3999640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 371 - 582
Target Start/End: Complemental strand, 37820693 - 37820472
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| |||||| ||||| ||||||||||||||| | || ||| |||       || | ||||||||||||||    
T  37820693 ttgtgttattcaatcaagattctttgtcatttaaaaaaattcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaat 37820594  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          ||||||||||||||||||  |||| ||||||| || |||||||| |||||| |||| ||    
T  37820593 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttccagtgaaattttagcatgaaaaagtctttcataaaaacat 37820494  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| | |||||||||||    
T  37820493 gagatttcttaagattgttttt 37820472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 371 - 568
Target Start/End: Complemental strand, 33808015 - 33807807
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgctt-nnnnnnngttttgtggtattcaaaa 469  Q
    ||||| |||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||| || ||| |||        || | |||||||||||||    
T  33808015 ttgtgttattcaattaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaa 33807916  T
Q  470 tcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaaga 559  Q
    ||||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| |    
T  33807915 tcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaaca 33807816  T
Q  560 tgagatttc 568  Q
    |||||||||    
T  33807815 tgagatttc 33807807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 371 - 567
Target Start/End: Original strand, 35337725 - 35337930
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| || ||| |||       || | |||||||||||||     
T  35337725 ttgtgttattcaatcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaa 35337824  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
     ||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||    
T  35337825 aattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt-tttcatgaaaacat 35337923  T
Q  561 gagattt 567  Q
    |||||||    
T  35337924 gagattt 35337930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 371 - 582
Target Start/End: Original strand, 6589554 - 6589775
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| ||||||||||| |||| ||||||||| |||||||||||| ||||||||||||||||| || |||  ||       || | ||||||||||||||    
T  6589554 ttgtgttattcaatcaatattccttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaat 6589653  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||| ||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||    
T  6589654 cattcaaatttcgaagaattatttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 6589753  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| |  ||||||||||    
T  6589754 gagatttcttaggattgttttt 6589775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 371 - 566
Target Start/End: Original strand, 25418356 - 25418561
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||| |||        | | | ||||||||||||    
T  25418356 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttacaaaaaatctagcggtattcaaaat 25418455  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||  ||  ||||||||||||||          |||||||||||||||||| ||||| ||||||  || |||||||||||||||||||| ||    
T  25418456 cattcaaatttgaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtatttcatgaaaacat 25418555  T
Q  561 gagatt 566  Q
    ||||||    
T  25418556 gagatt 25418561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 371 - 582
Target Start/End: Complemental strand, 3206412 - 3206200
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    |||||||||||||||||||||||||         ||||||||||| ||||||||||||||||| || ||| |||       || | ||||||||||||||    
T  3206412 ttgtggtattcaatcaagattcttt---------aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 3206322  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| ||||||||||| ||||||||||| ||    
T  3206321 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacat 3206222  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| |  ||||||||||    
T  3206221 gagatttcttatgattgttttt 3206200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 371 - 566
Target Start/End: Original strand, 40246834 - 40247039
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| || |||  ||       || | ||||||||||||||    
T  40246834 ttgtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactattaatcagttaaaaaaagtctagtggtattcaaaat 40246933  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    ||||||||||| |||  ||||||||||||||          |||||||||||||||||| ||||| ||||||  || |||||||| ||||||||||| ||    
T  40246934 cattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacat 40247033  T
Q  561 gagatt 566  Q
    ||||||    
T  40247034 gagatt 40247039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 371 - 582
Target Start/End: Complemental strand, 44762253 - 44762032
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| ||||||||| ||  |||||||||||||||| || ||| |||       || | |||||||| |||||    
T  44762253 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtatttaaaat 44762154  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
     |||||| |||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||| ||||||| ||    
T  44762153 tattcaagtttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtcttttatgaaaacat 44762054  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| | |||||||||||    
T  44762053 gagatttcttaagattgttttt 44762032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 513 - 590
Target Start/End: Original strand, 45862983 - 45863060
Alignment:
Q  513 ggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcctgagattgtttttcttttaaa 590  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  45862983 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaa 45863060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 371 - 582
Target Start/End: Original strand, 54625582 - 54625803
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| ||||||||||| |||| ||||||||| |||||| |||||  |||||||||||||||| || ||| |||       || | ||||||||||||||    
T  54625582 ttgtgttattcaatcaatattcgttgtcatttaaaaaaaatcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 54625681  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
     ||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||    
T  54625682 tattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtttttcatgaaaacat 54625781  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| | |||||| ||||    
T  54625782 gagatttcttaagattgatttt 54625803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 255 - 349
Target Start/End: Complemental strand, 8400996 - 8400902
Alignment:
Q  255 ggttacacaaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||| |||||||||||||||||||||||||||||| || |||| | |||||| |||||||||||||||||| ||||||||||||||||||||    
T  8400996 ggttacataaaattttagggtgaggggatggtgccccagtccaaggcagggaagaccttcgggctcaaagagcacttacaaaggtaattacattt 8400902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 376 - 568
Target Start/End: Complemental strand, 33996752 - 33996550
Alignment:
Q  376 gtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcattc 475  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||| |||        |   |||||||||||||||||||    
T  33996752 gtattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatccagtggtattcaaaatcattc 33996653  T
Q  476 aaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagat 565  Q
    ||||||||||  ||||||||||||||          ||||||||| |||||||| ||||| ||||||| || |||||||| ||| || |||| |||||||    
T  33996652 aaatttcgaaggattgtttaataaatcagattttgatggattttgagggattttctagtgaaattttagcatgaaaaagtcttttataaaaacatgagat 33996553  T
Q  566 ttc 568  Q
    |||    
T  33996552 ttc 33996550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 457 - 582
Target Start/End: Original strand, 27899420 - 27899545
Alignment:
Q  457 gtggtattcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaa 556  Q
    |||||||||||||||||||||||||||||  ||||||||||||||  |||||||| ||||||| ||||| ||||||| || |||||||| ||||||||||    
T  27899420 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaa 27899519  T
Q  557 agatgagatttcctgagattgttttt 582  Q
    | |||| ||||| |  ||||||||||    
T  27899520 acatgaaatttcttatgattgttttt 27899545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 371 - 582
Target Start/End: Complemental strand, 29449074 - 29448853
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||| |||||||||  ||||||||||| | ||||||||||||||| |  ||| |||       || | ||||||||||||||    
T  29449074 ttgtgttattcaatcaagattccttgtcatttacaaaaagtcttgtgatattcaatcaagactctcaatcacttaaaaaaagtctagtggtattcaaaat 29448975  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||  ||||||| ||  ||||||| ||||||||||| ||    
T  29448974 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcataaaaaagtctttcatgaaaacat 29448875  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| |  ||||||||||    
T  29448874 gagatttcttaggattgttttt 29448853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 373 - 481
Target Start/End: Original strand, 12103621 - 12103729
Alignment:
Q  373 gtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatca 472  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||       || |  |||||||||||||||    
T  12103621 gtggtattcaattaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcatggtattcaaaatca 12103720  T
Q  473 ttcaaattt 481  Q
    |||||||||    
T  12103721 ttcaaattt 12103729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 379 - 523
Target Start/End: Complemental strand, 53929336 - 53929192
Alignment:
Q  379 ttcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcattcaaa 478  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||| |||       || | |||||||||||||||||| |||    
T  53929336 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaa 53929237  T
Q  479 tttcgaattattgtttaataaattggattttgtgggattttgtag 523  Q
    | |||||  ||||||||||||||  |||||||  |||||||||||    
T  53929236 tatcgaacgattgtttaataaataagattttgatggattttgtag 53929192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 50823831 - 50823745
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||||||| || |||| | |||||| |||||||||||||||||| ||||||||||||||||||||    
T  50823831 aaaattttagggtgaggggatggtgccccagtccaaggcagggaagaccttcgggctcaaagagcacttacaaaggtaattacattt 50823745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 263 - 349
Target Start/End: Original strand, 50852029 - 50852115
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||||||| || |||| | |||||| |||||||||||||||||| ||||||||||||||||||||    
T  50852029 aaaattttagggtgaggggatggtgccccagtccaaggcagggaagaccttcgggctcaaagagcacttacaaaggtaattacattt 50852115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 371 - 440
Target Start/End: Original strand, 18749560 - 18749629
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatc 440  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18749560 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatc 18749629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 264 - 349
Target Start/End: Original strand, 22371729 - 22371814
Alignment:
Q  264 aaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||||||||||||||||||||||| ||||| | | |||||||||||||| |||||||||| ||||||||||||||||||||    
T  22371729 aaattttagggtgaggggatggtgccccagtctaaagcagggaagatcttcgggttcaaagagcacttacaaaggtaattacattt 22371814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 264 - 349
Target Start/End: Original strand, 30534902 - 30534987
Alignment:
Q  264 aaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||||||||||||||||| ||||| || |||| | ||||||||||||||||||||||||| ||||||||||||||||||||    
T  30534902 aaattttagggtgaggggatggtaccccagtccaaggcagggaagatcttcgggctcaaagagcacttacaaaggtaattacattt 30534987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 261 - 350
Target Start/End: Original strand, 37330604 - 37330693
Alignment:
Q  261 acaaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacatttt 350  Q
    |||||||||||||||||||||||||||||||| || |||| | |||||| |||||| ||||||||||| |||||||||||||||||||||    
T  37330604 acaaaattttagggtgaggggatggtgccccagtccaaggcagggaagaccttcggactcaaagagcacttacaaaggtaattacatttt 37330693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 371 - 521
Target Start/End: Original strand, 29029996 - 29030145
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||| |||| |||||||||||| |||||||||||| ||||||||||||||||| || ||| |||       || ||||||||||||||||    
T  29029996 ttgtgttattcaattaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt-aaaaaagtcttgtggtattcaaaat 29030094  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgt 521  Q
    ||||||||||| |||  ||||||||||||||  |||||||  |||||||||    
T  29030095 cattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 29030145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 7417931 - 7417845
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||||||| || |||| |  ||||| |||||||||||||||||| ||||||||||||||||||||    
T  7417931 aaaattttagggtgaggggatggtgccccagtccaaggcagtgaagaccttcgggctcaaagagcacttacaaaggtaattacattt 7417845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 405 - 510
Target Start/End: Complemental strand, 539586 - 539481
Alignment:
Q  405 aaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcattcaaatttcgaattattgtttaataaattgg 504  Q
    ||||||||||||||||||||||||||| ||||||||  ||       || |||||||||||||||||||||||||||||||  ||| |||||||||||||    
T  539586 aaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaattgg 539487  T
Q  505 attttg 510  Q
    ||||||    
T  539486 attttg 539481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 371 - 519
Target Start/End: Complemental strand, 1440169 - 1440020
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattt-taaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaa 469  Q
    ||||| ||||||||||||||||||||||||||  |||||||| ||| ||||||||||||||||| || ||| |||       || | |||||||||||||    
T  1440169 ttgtgttattcaatcaagattctttgtcatttaaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaa 1440070  T
Q  470 tcattcaaatttcgaattattgtttaataaattggattttgtgggatttt 519  Q
    ||||||||||||| ||  ||||||||||||||  |||||||  |||||||    
T  1440069 tcattcaaatttccaaggattgtttaataaatcagattttgatggatttt 1440020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 261 - 349
Target Start/End: Complemental strand, 35198900 - 35198812
Alignment:
Q  261 acaaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||||| ||| || |||| | |||||| |||||||||||||||||| ||||||||||| ||||||||    
T  35198900 acaaaattttagggtgaggggatggtgctccagtccaaggcagggaagaccttcgggctcaaagagcacttacaaaggtatttacattt 35198812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 371 - 510
Target Start/End: Original strand, 52114518 - 52114658
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgctt-nnnnnnngttttgtggtattcaaaa 469  Q
    ||||| ||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||| ||| |||        || | |||||||||||||    
T  52114518 ttgtgttattcaaccaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaaagtctagtggtattcaaaa 52114617  T
Q  470 tcattcaaatttcgaattattgtttaataaattggattttg 510  Q
    | |||||||||||| |  ||||||||||||||  |||||||    
T  52114618 taattcaaatttcgcaggattgtttaataaatcagattttg 52114658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 377 - 510
Target Start/End: Complemental strand, 51699689 - 51699557
Alignment:
Q  377 tattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcattca 476  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||| || ||| |||        | | ||||||||||||||||||||    
T  51699689 tattcaatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaa-tctagtggtattcaaaatcattca 51699591  T
Q  477 aatttcgaattattgtttaataaattggattttg 510  Q
    |||||||||  |||| |||||||||  |||||||    
T  51699590 aatttcgaaggattggttaataaataagattttg 51699557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 22856020 - 22855934
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||| ||| || |||| | |||||| ||| ||||| |||||||| ||||||||||||||||||||    
T  22856020 aaaattttagggtgaggggatggtgctccagtccaaggcagggaagacctttgggcttaaagagcacttacaaaggtaattacattt 22855934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 261 - 349
Target Start/End: Complemental strand, 34824691 - 34824603
Alignment:
Q  261 acaaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||| |||||||||||||||||||||||||| || ||||   |||||| ||||||| |||||||||| |||||||| |||||||||||    
T  34824691 acaaatttttagggtgaggggatggtgccccagtccaaggccgggaagaccttcgggatcaaagagcacttacaaagataattacattt 34824603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 37454453 - 37454509
Alignment:
Q  34 tgctgcaataatgactaattcaatattccaacatggaaagagaggagaaagatctaa 90  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  37454453 tgctgcaataataactaattcagtattccaacatggaaagagaggagaaagatctaa 37454509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 457 - 545
Target Start/End: Original strand, 52080003 - 52080091
Alignment:
Q  457 gtggtattcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagt 545  Q
    ||||||||||||||||||||||||| |||  ||||||||||||||  |||||||||||||||| || || ||||||| || ||||||||    
T  52080003 gtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgtgggattttctaatgaaattttagcatgaaaaagt 52080091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 261 - 349
Target Start/End: Complemental strand, 52545456 - 52545368
Alignment:
Q  261 acaaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||||||||| || |||| | |||||| |||||||||||||||  | ||||||| ||| ||||||||    
T  52545456 acaaaattttagggtgaggggatggtgccccagtccaaggcagggaagaccttcgggctcaaagactacttacaaaagtatttacattt 52545368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 371 - 519
Target Start/End: Original strand, 55235176 - 55235322
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||| || ||||||||||||| |||||||||||||||||  ||||||||||||||| ||| ||||||  ||       || |  || ||||||||||    
T  55235176 ttgtggtctttaatcaagattctt-gtcattttaaaaaagtcacgaggtattcaatcaaaactcttcatcaattaaaaaa-gtctcatgatattcaaaat 55235273  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggatttt 519  Q
    |||||||||||||||  ||||||||||||||||| |||||  |||||||    
T  55235274 cattcaaatttcgaaagattgtttaataaattggtttttgatggatttt 55235322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 25910665 - 25910738
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaa 336  Q
    ||||||||||||||||||||||||||| || || |||| | ||||||||||||| ||||||||||| |||||||    
T  25910665 aaaattttagggtgaggggatggtgcctcagtccaaggcagggaagatcttcggactcaaagagcacttacaaa 25910738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 502 - 582
Target Start/End: Complemental strand, 6131308 - 6131228
Alignment:
Q  502 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcctgagattgttttt 582  Q
    |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| |||||||||| |  ||||||||||    
T  6131308 tggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 6131228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 458 - 582
Target Start/End: Original strand, 5825139 - 5825273
Alignment:
Q  458 tggtattcaaaatcattcaaatttcgaattattgtttaataaattg----------gattttgtgggattttgtagtgtaattttaacaagaaaaagtat 547  Q
    |||||||||||||||||||||||| |||  ||||||||||||||||          |||||||||||||||| ||||| |||| || || |||||||  |    
T  5825139 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatagattttgtgggattttttagtgaaattctagcatgaaaaaggct 5825238  T
Q  548 ttcatgaaaagatgagatttcctgagattgttttt 582  Q
    |||||||||| |||||||||| |  ||||||||||    
T  5825239 ttcatgaaaacatgagatttcttatgattgttttt 5825273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 371 - 422
Target Start/End: Complemental strand, 27240459 - 27240408
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtatt 422  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  27240459 ttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtatt 27240408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 55468129 - 55468046
Alignment:
Q  267 ttttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcggg-ctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||| || |||| |  ||||| ||||||| ||||||||||| ||||||||||| ||||||||    
T  55468129 ttttagggtgaggggatggtgccccagtccaaggcagagaagaccttcggggctcaaagagcacttacaaaggtatttacattt 55468046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 371 - 542
Target Start/End: Original strand, 22057751 - 22057933
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagt-cttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaa 469  Q
    ||||| |||||||||||||||||||||||||| ||||||   |||| ||||||| ||||||||| || ||| |||        | | |||||||| ||||    
T  22057751 ttgtgttattcaatcaagattctttgtcatttaaaaaaaaaacttgtggtattccatcaagactcttgatcacttaaaaaaaatctagtggtatttaaaa 22057850  T
Q  470 tcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaa 542  Q
    |||||||||||||||   ||||||||||||||          |||||||||||||||||| ||||| |||||||||| |||||    
T  22057851 tcattcaaatttcgatggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaacatgaaaa 22057933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 43334057 - 43334139
Alignment:
Q  267 ttttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||| ||||| || |||| | |||||| ||||||||||||| |||| ||||||| ||| ||||||||    
T  43334057 ttttagggtgaggggatggtaccccagtccaaggcagggaagaccttcgggctcaaatagcacttacaaaagtatttacattt 43334139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 455 - 532
Target Start/End: Complemental strand, 23535943 - 23535866
Alignment:
Q  455 ttgtggtattcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaatttt 532  Q
    ||||||||||||||||||||||||||| |||  || ||||||| |||| ||||| |||||||||| ||||| ||||||    
T  23535943 ttgtggtattcaaaatcattcaaatttagaaggatcgtttaattaattagatttagtgggattttctagtgaaatttt 23535866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 433
Target Start/End: Complemental strand, 6131388 - 6131325
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    |||||| ||||||||||||| || ||||||||| |||||||| ||| |||||||||||||||||    
T  6131388 tttgtgttattcaatcaagactcattgtcatttaaaaaaagttttgtggtattcaatcaagact 6131325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 10660483 - 10660545
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  |||| |||||||||||| |||||||||||||||||    
T  10660483 ttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 10660545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 264 - 349
Target Start/End: Complemental strand, 29636001 - 29635915
Alignment:
Q  264 aaattttagggtgaggggat-ggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||| ||||||| || ||||||||| || |||| | ||||||  |||||||| |||||||| ||||||||||||||||||||    
T  29636001 aaattttagcgtgagggaattggtgccccactccaaggcagggaagacattcgggcttaaagagcacttacaaaggtaattacattt 29635915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 36674388 - 36674326
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  |||| |||||||||||| |||||||||||||||||    
T  36674388 ttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 36674326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 263 - 344
Target Start/End: Original strand, 19872482 - 19872563
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaatta 344  Q
    ||||||||||| |||||||||||||||||| || |||  | |||||| ||||||  |||||||| | |||||||||||||||    
T  19872482 aaaattttaggatgaggggatggtgccccagtccaagacagggaagaccttcggattcaaagagtacttacaaaggtaatta 19872563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 3206454 - 3206394
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| |||||||||||||||    
T  3206454 ttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtggtattcaatcaaga 3206394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 23753644 - 23753584
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| | ||||  |||| |||||||||||| |||||||||||||||    
T  23753644 ttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 23753584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 374 - 425
Target Start/End: Original strand, 27899379 - 27899430
Alignment:
Q  374 tggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaa 425  Q
    |||||||||||||||| |||||||||||| |||||||||| | |||||||||    
T  27899379 tggtattcaatcaagactctttgtcatttaaaaaaagtctggtggtattcaa 27899430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 6131429 - 6131367
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||| |||||||||||||| | ||||||||| |||||||| ||| | |||||||||||||||    
T  6131429 ttgtgttattcaatcaagatccattgtcatttaaaaaaagttttgtgttattcaatcaagact 6131367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 11431474 - 11431536
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  |||| |||||||||||| |||||||||| ||||||    
T  11431474 ttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaataaagact 11431536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 18749518 - 18749580
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  | || |||||||||||| |||||||||||||||||    
T  18749518 ttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 18749580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 27240501 - 27240439
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  | || |||||||||||| |||||||||||||||||    
T  27240501 ttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 27240439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 417
Target Start/End: Original strand, 38772325 - 38772371
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgag 417  Q
    ||||||||||||||||||||||||||| | || ||||||||||||||    
T  38772325 ttgtggtattcaatcaagattctttgtaacttaaaaaaagtcttgag 38772371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 40897092 - 40897154
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||||| ||||  | || |||||||||||| |||||||| ||||||||    
T  40897092 ttgtggtattcaatcaagattttttgcaacttaaaaaaagtcttgtggtattcattcaagact 40897154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 349
Target Start/End: Complemental strand, 42876355 - 42876262
Alignment:
Q  255 ggttacacaaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||| ||||||| |||||||| ||||||||||| | || ||| || ||||||  |||  | |||||||||| ||||||||||||||||||||    
T  42876355 ggttacagaaaattt-agggtgagaggatggtgccctagtccaagatagggaagacattcaagttcaaagagcacttacaaaggtaattacattt 42876262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 426
Target Start/End: Original strand, 44276338 - 44276392
Alignment:
Q  372 tgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaat 426  Q
    ||||||||||||| |||| ||||||| |||| |||||||||||| ||||||||||    
T  44276338 tgtggtattcaattaagactctttgtaatttaaaaaaagtcttgtggtattcaat 44276392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 44906771 - 44906709
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  | || |||||||||||| |||||||||||||||||    
T  44906771 ttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 44906709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 50762308 - 50762246
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  | || |||||||||||| |||||||||||||||||    
T  50762308 ttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 50762246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 50903501 - 50903439
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  | || |||||||||||| |||||||||||||||||    
T  50903501 ttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 50903439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 54628791 - 54628853
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  | || |||||||||||| |||||||||||||||||    
T  54628791 ttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 54628853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 1440210 - 1440151
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| | ||| ||| ||||||||||||||| | |||||||||||||    
T  1440210 ttgtggtattcaatcaagactattt-tcaatttaaaaaagtcttgtgttattcaatcaaga 1440151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 10139404 - 10139344
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  10139404 ttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 10139344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Original strand, 19253775 - 19253835
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  19253775 ttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 19253835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 400 - 436
Target Start/End: Original strand, 27593198 - 27593234
Alignment:
Q  400 ttttaaaaaagtcttgaggtattcaatcaagactttt 436  Q
    ||||||||||||||| |||||||||||||||||||||    
T  27593198 ttttaaaaaagtctttaggtattcaatcaagactttt 27593234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Original strand, 35337683 - 35337743
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  35337683 ttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 35337743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 400 - 436
Target Start/End: Original strand, 36786017 - 36786053
Alignment:
Q  400 ttttaaaaaagtcttgaggtattcaatcaagactttt 436  Q
    ||||||||||||||| |||||||||||||||||||||    
T  36786017 ttttaaaaaagtctttaggtattcaatcaagactttt 36786053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 37820735 - 37820675
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  37820735 ttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 37820675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 44762295 - 44762235
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  44762295 ttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaga 44762235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 422
Target Start/End: Complemental strand, 539639 - 539588
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtatt 422  Q
    ||||||||||||||||| | ||||||| |||| |||||||||||| ||||||    
T  539639 ttgtggtattcaatcaaaactctttgtaatttaaaaaaagtcttgtggtatt 539588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 375 - 425
Target Start/End: Complemental strand, 539574 - 539524
Alignment:
Q  375 ggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaa 425  Q
    ||||||||||||||||| ||  |||||| |||||||||||| |||||||||    
T  539574 ggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaa 539524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 2024155 - 2024217
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | |||||||||| |||| | ||||| | |||| ||||||||||    
T  2024155 ttgtggtattcaatcaagactatttgtcatttaaaaataatcttgtgatatttaatcaagact 2024217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 429
Target Start/End: Original strand, 6589512 - 6589570
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaa 429  Q
    |||||||||||||| |||| ||||| | |||| |||||||||||| | |||||||||||    
T  6589512 ttgtggtattcaattaagactctttctaatttaaaaaaagtcttgtgttattcaatcaa 6589570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 31646542 - 31646480
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  | || |||||||||||  |||||||||||||||||    
T  31646542 ttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttatggtattcaatcaagact 31646480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 52618223 - 52618161
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||| ||||||||| ||||| | || ||||||||| || | |||||||||||||||    
T  52618223 ttgtggtattcgatcaagattttttgtaacttaaaaaaagtcatgtgatattcaatcaagact 52618161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 431
Target Start/End: Complemental strand, 6131471 - 6131411
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    |||||||||||||||||||| |||||  || || |||||||||||| | |||||||||||||    
T  6131471 tttgtggtattcaatcaagactcttt-ccaattgaaaaaagtcttgtgttattcaatcaaga 6131411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 436
Target Start/End: Complemental strand, 10216196 - 10216163
Alignment:
Q  403 taaaaaagtcttgaggtattcaatcaagactttt 436  Q
    ||||||||||||| ||||||||||||||||||||    
T  10216196 taaaaaagtcttgtggtattcaatcaagactttt 10216163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 436
Target Start/End: Complemental strand, 10225704 - 10225671
Alignment:
Q  403 taaaaaagtcttgaggtattcaatcaagactttt 436  Q
    ||||||||||||| ||||||||||||||||||||    
T  10225704 taaaaaagtcttgtggtattcaatcaagactttt 10225671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 433
Target Start/End: Original strand, 44276296 - 44276357
Alignment:
Q  372 tgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    |||||||||||||||| | | ||||| |||| ||||||||| || |||||||||| ||||||    
T  44276296 tgtggtattcaatcaaaactttttgtaatttaaaaaaagtcatgtggtattcaattaagact 44276357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 349
Target Start/End: Original strand, 50725993 - 50726082
Alignment:
Q  261 acaaaattt-tagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||| |||||||| ||||||||||||||||| || ||| ||||||  ||||  |||||| || | ||||||| ||||||| ||||    
T  50725993 acaaaatttgtagggtgaagggatggtgccccaatccaaagtagggaagactttcgaactcaaaaagaacttacaaaagtaattatattt 50726082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #116
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 349
Target Start/End: Complemental strand, 50786855 - 50786766
Alignment:
Q  261 acaaaattt-tagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||| |||||||| ||||||||||||||||| || ||| ||||||  ||||  |||||| || | ||||||| ||||||| ||||    
T  50786855 acaaaatttgtagggtgaagggatggtgccccaatccaaagtagggaagactttcgaactcaaaaagaacttacaaaagtaattatattt 50786766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #117
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 431
Target Start/End: Complemental strand, 51699738 - 51699677
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    |||||||||||||||||||| |||||   |||| ||||||||||||   |||||||||||||    
T  51699738 tttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtattattcaatcaaga 51699677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #118
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 996343 - 996284
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||  || || |||||||||||| | |||||||||||||    
T  996343 ttgtggtattcaatcaagactcttt-ccaattaaaaaaagtcttgtgttattcaatcaaga 996284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #119
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 371 - 431
Target Start/End: Original strand, 20498157 - 20498217
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||| ||| | |||||||||||||    
T  20498157 ttgtggtattcaatcaagactctttccaatttaaaaaaagttttgtgttattcaatcaaga 20498217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #120
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 128 - 156
Target Start/End: Original strand, 37150181 - 37150209
Alignment:
Q  128 cgttaattagaggttttaatggaacatga 156  Q
    |||||||||||||||||||||||||||||    
T  37150181 cgttaattagaggttttaatggaacatga 37150209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #121
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 400 - 436
Target Start/End: Complemental strand, 39338335 - 39338299
Alignment:
Q  400 ttttaaaaaagtcttgaggtattcaatcaagactttt 436  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  39338335 ttttaaaaaagtctttaggtattcaataaagactttt 39338299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #122
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 371 - 431
Target Start/End: Original strand, 40246792 - 40246852
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| ||||| |  ||| |||||| ||||| | |||||||||||||    
T  40246792 ttgtggtattcaatcaagactctttctggtttaaaaaaaatcttgtgttattcaatcaaga 40246852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 173; Significance: 1e-92; HSPs: 76)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 7466326 - 7466547
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||       || ||||||||||||||||    
T  7466326 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaaaat 7466425  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
    ||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |    
T  7466426 cattcaaattttgaagaattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 7466525  T
Q  571 gagattgtttttcttttaaaag 592  Q
    ||||||||||||||||||||||    
T  7466526 gagattgtttttcttttaaaag 7466547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 32497516 - 32497737
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |||       || ||||||||||||||||    
T  32497516 ttgtggtattcaatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaat 32497615  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |    
T  32497616 cattcaaatttcgaatgattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagagaaagtctttcatgaaaagatgagatttctt 32497715  T
Q  571 gagattgtttttcttttaaaag 592  Q
    ||||||||||||||||||||||    
T  32497716 gagattgtttttcttttaaaag 32497737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 371 - 592
Target Start/End: Complemental strand, 18306176 - 18305955
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||       || ||||||||||||||||    
T  18306176 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 18306077  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |    
T  18306076 cattcaaatttcgaaagattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 18305977  T
Q  571 gagattgtttttcttttaaaag 592  Q
    ||||||||| ||||||||||||    
T  18305976 gagattgttattcttttaaaag 18305955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 16362187 - 16362408
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||       || | ||||||||||||||    
T  16362187 ttgtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattacttaaaaaaagtctcgtggtattcaaaat 16362286  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
    |||||||||||||||  |||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | ||| || ||||||||||||||| |    
T  16362287 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaaatcttttataaaaagatgagatttctt 16362386  T
Q  571 gagattgtttttcttttaaaag 592  Q
    ||||||||||||||||||||||    
T  16362387 gagattgtttttcttttaaaag 16362408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 371 - 592
Target Start/End: Complemental strand, 9288672 - 9288441
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||| |||       || ||||||||||||||||    
T  9288672 ttgtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggtattcaaaat 9288573  T
Q  471 cattcaaatttcgaattattgtttaataaattgg----------attttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  |||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  9288572 cattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 9288473  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||| |||||||||||||||||||||||    
T  9288472 gagatttcttgagattgtttttcttttaaaag 9288441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 371 - 592
Target Start/End: Complemental strand, 14782350 - 14782119
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||       || ||||||||||||||||    
T  14782350 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 14782251  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    ||||||||||| |||  |||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  14782250 cattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 14782151  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||| ||||||||||||| |||||||||    
T  14782150 gagatttcttgagattgtttttattttaaaag 14782119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 371 - 592
Target Start/End: Complemental strand, 19718096 - 19717865
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||       || ||||||||||||||||    
T  19718096 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 19717997  T
Q  471 cattcaaatttcgaattattgtttaataaattggatttt----------gtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  19717996 cattcaaatttcgaagaattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagat 19717897  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||| ||||||||||||| |||||||||    
T  19717896 gagatttcttgagattgtttttgttttaaaag 19717865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 371 - 592
Target Start/End: Complemental strand, 44726025 - 44725794
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||       || ||||||||||||||||    
T  44726025 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 44725926  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    ||||||||||| |||  |||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  44725925 cattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 44725826  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||| ||||||||||||| |||||||||    
T  44725825 gagatttcttgagattgtttttattttaaaag 44725794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 371 - 592
Target Start/End: Complemental strand, 39467683 - 39467452
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||       || ||||||||||||||||    
T  39467683 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 39467584  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  |||||||||||||||| ||||||          ||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  39467583 cattcaaatttcgaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagat 39467484  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||  |||||||||||||||||||||||    
T  39467483 gagattttttgagattgtttttcttttaaaag 39467452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 374 - 592
Target Start/End: Original strand, 31623689 - 31623897
Alignment:
Q  374 tggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcat 473  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||       || |||||||||||||||||||    
T  31623689 tggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcat 31623788  T
Q  474 tcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcctgag 573  Q
    ||||||||||||  |||||||||||||||          ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||    
T  31623789 tcaaatttcgaaggattgtttaataaatt----------ggattttgtagtgtaattttaacaagaaaaagtttttcatgaaaagataagatttcttgag 31623878  T
Q  574 attgtttttcttttaaaag 592  Q
    |||||||||||||||||||    
T  31623879 attgtttttcttttaaaag 31623897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 26856057 - 26856289
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtctt-gaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaa 469  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||       || |||||||||||||||    
T  26856057 ttgtggtattcaatcaagactctttgtcattttaaaaaagtctttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaa 26856156  T
Q  470 tcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaaga 559  Q
    |||||||||||||||| |||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||| |||||  |||| |    
T  26856157 tcattcaaatttcgaagtattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcagaaaaaaa 26856256  T
Q  560 tgagatttcctgagattgtttttcttttaaaag 592  Q
    | ||||||| |||||||||||||||||||||||    
T  26856257 taagatttcttgagattgtttttcttttaaaag 26856289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 371 - 592
Target Start/End: Complemental strand, 42306000 - 42305779
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||        | ||||||||||||||||    
T  42306000 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaaat 42305901  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
     ||||||||||||||  |||||||||| |||||||||||   |||||||||||||||||||||||||||||||||  |||||||||| |||||||||| |    
T  42305900 aattcaaatttcgaaggattgtttaatcaattggattttaatggattttgtagtgtaattttaacaagaaaaagtcattcatgaaaaaatgagatttctt 42305801  T
Q  571 gagattgtttttcttttaaaag 592  Q
    |||||||||||| |||| ||||    
T  42305800 gagattgtttttgtttttaaag 42305779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 371 - 592
Target Start/End: Complemental strand, 18958942 - 18958711
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||  ||       || ||||||||||||||||    
T  18958942 ttgtggtattcaatcaagactctttatcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 18958843  T
Q  471 cattcaaatttcgaattattgtttaataaattggatttt----------gtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18958842 cattcaaatttcgaaggattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 18958743  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
     ||||||  ||||||||||||| |||||||||    
T  18958742 tagattttttgagattgtttttgttttaaaag 18958711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 378 - 587
Target Start/End: Complemental strand, 10295589 - 10295369
Alignment:
Q  378 attcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcattcaa 477  Q
    |||||||||||| |||| |||| || ||||||||||||||||||||||||||||||||||||| |||       || |||||||||||||||||||||||    
T  10295589 attcaatcaagactcttcgtcacttaaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaa 10295490  T
Q  478 atttcgaattattgtttaataaattggat-----------tttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatt 566  Q
    ||||||||  |||||||||||||||||||           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10295489 atttcgaaggattgtttaataaattggattttgatggatttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 10295390  T
Q  567 tcctgagattgtttttctttt 587  Q
    || ||||||||||||| ||||    
T  10295389 tcttgagattgtttttttttt 10295369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 4403098 - 4403329
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| || || ||||||||||||| |||||| ||||||||| |||| |||||||| |||        | | ||||||||||||||    
T  4403098 ttgtggtattcaatcaagactcattttcattttaaaaaaatcttgaagtattcaattaagatttttcatcacttaaaaaaaatctcgtggtattcaaaat 4403197  T
Q  471 cattcaaatttcgaattattgtttaataaattgg----------attttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  |||||||||||||||||          ||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||    
T  4403198 cattcaaatttcgaaggattgtttaataaattgggttttgatggattttgtgggattttttagtgtaattttaacaagaaaaagtctttcatgaaaatat 4403297  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||| || ||||||||||||||||||||    
T  4403298 gagatttcttgggattgtttttcttttaaaag 4403329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 371 - 592
Target Start/End: Complemental strand, 43166905 - 43166674
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| | ||||  |||| |||||||||||| ||||||||||||||||| ||  ||  ||       || ||||||||||||||||    
T  43166905 ttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgtggtattcaaaat 43166806  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  |||||||||||||||||||||||          ||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  43166805 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaaaagtttttcatgaaaagat 43166706  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||| |||||||| ||||||||||||||    
T  43166705 gagatttcttgagattggttttcttttaaaag 43166674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 405 - 592
Target Start/End: Original strand, 37857144 - 37857331
Alignment:
Q  405 aaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcattcaaatttcgaattattgtttaataaattgg 504  Q
    ||||||| |||||||||||||| |||| |||||||| |||       || |||||||||||||| ||||||||||||  ||  |||||||||||||||||    
T  37857144 aaaaagttttgaggtattcaattaagatttttcatcacttaaaaaaagtcttgtggtattcaaattcattcaaattttaaaggattgtttaataaattgg 37857243  T
Q  505 attttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcctgagattgtttttcttttaaaag 592  Q
    ||||||  ||||||||||||||||||| ||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||    
T  37857244 attttgatggattttgtagtgtaatttgaacaagaaaaaatctttcatgaaaagatgagatttcttgagattgtttttcttttaaaag 37857331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 371 - 560
Target Start/End: Complemental strand, 4031473 - 4031294
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||   ||       || ||||||||||||||||    
T  4031473 ttgtggtattcaatcaagaatctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcataaattaaaaaaagtcttgtggtattcaaaat 4031374  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  |||||||||||||||          ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  4031373 cattcaaatttcgaaggattgtttaataaatt----------ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 4031294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 370 - 582
Target Start/End: Original strand, 41479087 - 41479299
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaa 469  Q
    |||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||| |||       || |  ||||||||||||    
T  41479087 tttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaa 41479186  T
Q  470 tcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcc 569  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||||||| ||||  ||||||| || |||||| | ||||||||||| ||||||||||     
T  41479187 tcattcaaatttcgaatgattgtttaataaatcagattttgtgggattttctagtaaaattttagcatgaaaaaatctttcatgaaaacatgagatttct 41479286  T
Q  570 tgagattgttttt 582  Q
    |  ||||||||||    
T  41479287 taggattgttttt 41479299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 371 - 582
Target Start/End: Complemental strand, 2705034 - 2704813
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||| |||       || | ||||||||||||||    
T  2705034 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 2704935  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||| ||||||||||||||          |||||||||||||||||| |||||  |||||| || |||||||| ||||||||||| ||    
T  2704934 cattcaaatttcgaatgattgtttaataaatcaaattttgatggattttgtgggattttctagtgatattttagcatgaaaaagtctttcatgaaaacat 2704835  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| |  ||||||||||    
T  2704834 gagatttcttaggattgttttt 2704813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 371 - 582
Target Start/End: Complemental strand, 26374645 - 26374424
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||| |||       || | ||||||||||||||    
T  26374645 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 26374546  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||    
T  26374545 cattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 26374446  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| |  ||||||||||    
T  26374445 gagatttcttaggattgttttt 26374424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 371 - 582
Target Start/End: Complemental strand, 24502028 - 24501807
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| ||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||| || ||| |||       || | ||||||||||||||    
T  24502028 ttgtgttattcaatcaagattctttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 24501929  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||    
T  24501928 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 24501829  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| |  ||||||||||    
T  24501828 gagatttcttaggattgttttt 24501807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 371 - 582
Target Start/End: Original strand, 43959649 - 43959859
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||| | || ||| |||       |  | ||||||||||||||    
T  43959649 ttgtgttattcaatcaagattctttgtcattttaaaaaagtcttgtg-tattcaatcaagattcttaatcacttcaaaaaagactagtggtattcaaaat 43959747  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
    |||||||||||||||| ||||||||||||||  |||||||  ||||||||| ||| ||||||| || |||||||| ||| || |||| |||||||||| |    
T  43959748 cattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtggtgaaattttagcatgaaaaagtctttaattaaaacatgagatttctt 43959847  T
Q  571 gagattgttttt 582  Q
      ||||||||||    
T  43959848 atgattgttttt 43959859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 371 - 582
Target Start/End: Complemental strand, 42938332 - 42938111
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| ||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||| || ||| |||       || | ||||||||||||||    
T  42938332 ttgtgttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 42938233  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| |  |||||||| ||||||||||| ||    
T  42938232 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcctgaaaaagtctttcatgaaaacat 42938133  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| |  ||||||||||    
T  42938132 gagatttcttaggattgttttt 42938111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 377 - 567
Target Start/End: Complemental strand, 10392446 - 10392246
Alignment:
Q  377 tattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcattca 476  Q
    ||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||| ||| |||       || | |||||||||| |||||||||    
T  10392446 tattcaatcaagattctttgtcattttaaaaaattcttgtgatattcaatcaagacttttaatcacttaagaaaagtctagtggtattcagaatcattca 10392347  T
Q  477 aatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatt 566  Q
    |||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||| | ||||||||||| ||||||||    
T  10392346 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagatt 10392247  T
Q  567 t 567  Q
    |    
T  10392246 t 10392246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 371 - 582
Target Start/End: Complemental strand, 42735492 - 42735271
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| ||||||||||||||||||| |||||| ||||||| |||| |||||||||| |||||| || ||| |||       || | ||||||||||||||    
T  42735492 ttgtgttattcaatcaagattctttatcatttaaaaaaagacttgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 42735393  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    ||||||||||||||| |||||||||||||||          |||||||||||||||||| ||||| ||||||| |  |||||||| |||||| |||| ||    
T  42735392 cattcaaatttcgaagtattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcttgaaaaagtctttcataaaaacat 42735293  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| |  ||||||||||    
T  42735292 gagatttcttaggattgttttt 42735271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 371 - 582
Target Start/End: Complemental strand, 5576836 - 5576614
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgctt-nnnnnnngttttgtggtattcaaaa 469  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||| |||        ||   |||||||||||||    
T  5576836 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtcaagtggtattcaaaa 5576737  T
Q  470 tcattcaaatttcgaattattgtttaataaa----------ttggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaaga 559  Q
    ||||||||||||||||  |||||||||||||           |||||||||||||||||| ||||| ||||||| || |||||||| ||| ||||||| |    
T  5576736 tcattcaaatttcgaagaattgtttaataaaccagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttttatgaaaaca 5576637  T
Q  560 tgagatttcctgagattgttttt 582  Q
    ||||||||| |  ||||||||||    
T  5576636 tgagatttcttaggattgttttt 5576614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 371 - 557
Target Start/End: Complemental strand, 32711497 - 32711313
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||| |||       || | ||||||||||||||    
T  32711497 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 32711398  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaa 557  Q
    |||| ||||||||||  ||||||||||||||  |||||||||| |   | || || ||||||| || |||||||| |||||||||||    
T  32711397 catttaaatttcgaaggattgtttaataaatcagattttgtggaa--atctattgaaattttagcatgaaaaagtctttcatgaaaa 32711313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 371 - 582
Target Start/End: Original strand, 42937344 - 42937563
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| ||||||||||||||| |||||||||| |||||||||||| |||||||||||  |||| || ||| |||       || | ||||||||||||||    
T  42937344 ttgtgttattcaatcaagattttttgtcatttaaaaaaagtcttgtggtattcaatc--gactcttaatcacttaaaaaaagtctagtggtattcaaaat 42937441  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| ||  ||||||| ||||||||||| ||    
T  42937442 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcattaaaaagtctttcatgaaaacat 42937541  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| |  ||||||||||    
T  42937542 gagatttcttatgattgttttt 42937563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 261 - 349
Target Start/End: Original strand, 32296636 - 32296724
Alignment:
Q  261 acaaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||||||||||||||||||||||||||||| |||| | |||||| |||||||||||||||||| ||||||||||||||||||||    
T  32296636 acaaaattttagggtgaggggatggtgccccaatccaaggcagggaagaccttcgggctcaaagagcacttacaaaggtaattacattt 32296724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 370 - 582
Target Start/End: Complemental strand, 7507115 - 7506893
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaa 469  Q
    |||||| ||||||||| |||||| ||||||||| | |||||||||| ||||||||||||||||| || ||| |||       || | |||||||||||||    
T  7507115 tttgtgttattcaatcgagattccttgtcatttaagaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaa 7507016  T
Q  470 tcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaaga 559  Q
     ||||||||||| |||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||| ||| |    
T  7507015 ccattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgtaaaca 7506916  T
Q  560 tgagatttcctgagattgttttt 582  Q
    ||||||||| |  ||||||||||    
T  7506915 tgagatttcttaggattgttttt 7506893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 17095679 - 17095597
Alignment:
Q  267 ttttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||| || |||| | |||||| |||||||||||||||||||||||||||||||||||||||    
T  17095679 ttttagggtgaggggatggtgccccagtccaaggcagggaagaccttcgggctcaaagagcatttacaaaggtaattacattt 17095597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 19723444 - 19723358
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||||||| || |||| | |||||||||| |||||||||||||| ||||||||||||||||||||    
T  19723444 aaaattttagggtgaggggatggtgccccagtccaaggcagggaagatctttgggctcaaagagcacttacaaaggtaattacattt 19723358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 371 - 566
Target Start/End: Complemental strand, 23115383 - 23115179
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||| || ||| |||       || | ||||||||| ||||    
T  23115383 ttgtgttattcaatcaagattctttgtcatttaaaaaatgtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc-aaat 23115285  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    ||||||||||| |||  ||||||||||||||          |||||||||||||||||| || || ||||||  || |||||||| ||||||||||| ||    
T  23115284 cattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttggcatgaaaaagtctttcatgaaaacat 23115185  T
Q  561 gagatt 566  Q
    ||||||    
T  23115184 gagatt 23115179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 11404134 - 11404048
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||||||| || |||| | |||||| |||||||||||||||||| ||||||||||| ||||||||    
T  11404134 aaaattttagggtgaggggatggtgccccagtccaaggcagggaagaccttcgggctcaaagagcacttacaaaggtatttacattt 11404048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 22711642 - 22711556
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||||| |||||||||||||||||| || |||| |||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  22711642 aaaattttaggatgaggggatggtgccccagtccaaggcaaggaagaccttcgggctcaaagagcacttacaaaggtatttacattt 22711556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 36261779 - 36261693
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||| |||||||||||||||||||| |  |||| | ||||||||||||||||||||||||| ||||||||||||||||||||    
T  36261779 aaaattttaaggtgaggggatggtgccccagttcaaggcagggaagatcttcgggctcaaagagcacttacaaaggtaattacattt 36261693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 370 - 592
Target Start/End: Complemental strand, 39190029 - 39189800
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaa 469  Q
    |||||||||||||||||||| ||||||  |||| |||||||||||| |||||||||| || ||| || |||  ||       || |  || ||||||| |    
T  39190029 tttgtggtattcaatcaagactctttgcaatttaaaaaaagtcttgtggtattcaataaaaactctttatcatttaaaaaaagtctcatg-tattcaaca 39189931  T
Q  470 tcattcaaatttcgaattattgtttaataaattg---------gattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    ||||||||||||||||  ||||||||||||||||         |||||||  | ||||| ||||  ||||||||||||||||| | ||||||||||| ||    
T  39189930 tcattcaaatttcgaaggattgtttaataaattgaatttgatggattttgatgaattttctagta-aattttaacaagaaaaaatctttcatgaaaacat 39189832  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||| || ||||||||||||||||||||    
T  39189831 gagatttcttgggattgtttttcttttaaaag 39189800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 263 - 344
Target Start/End: Complemental strand, 29767319 - 29767238
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaatta 344  Q
    |||||||||||||||||||||||||||||| || |||| | |||||| ||||||||||||||| || |||||||||||||||    
T  29767319 aaaattttagggtgaggggatggtgccccagtccaaggcagggaagaccttcgggctcaaagaacacttacaaaggtaatta 29767238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 28739564 - 28739646
Alignment:
Q  267 ttttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||||||||||||||||  || || |||||| |||||| |||||||||||||||||| ||||||||||| ||||||||    
T  28739564 ttttagggtgaggggatggtgctgcagtccaaggtagggaagaccttcgggctcaaagagcacttacaaaggtatttacattt 28739646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 41553418 - 41553332
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||| ||| ||||||| | |||||| ||||| ||||||||| || ||||||||||| ||||||||    
T  41553418 aaaattttagggtgaggggatggtgctccagtctaaggcagggaagaccttcgagctcaaagaacacttacaaaggtatttacattt 41553332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 11909426 - 11909508
Alignment:
Q  267 ttttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||| || |||| | |||||| ||||| |||||||||||| ||| ||||||| ||||||||    
T  11909426 ttttagggtgaggggatggtgccccagtccaaggcagggaagaccttcgagctcaaagagcacttagaaaggtatttacattt 11909508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 263 - 324
Target Start/End: Original strand, 27879559 - 27879620
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaag 324  Q
    |||||||||||||||||||||||||||||| || |||||| ||||||||||| |||||||||    
T  27879559 aaaattttagggtgaggggatggtgccccagtccaaggtagggaagatcttcaggctcaaag 27879620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 263 - 324
Target Start/End: Original strand, 28019740 - 28019801
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaag 324  Q
    |||||||||||||||||||||||||||||| || |||||| ||||||||||| |||||||||    
T  28019740 aaaattttagggtgaggggatggtgccccagtccaaggtagggaagatcttcaggctcaaag 28019801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 349
Target Start/End: Complemental strand, 30682973 - 30682886
Alignment:
Q  261 acaaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||||| |||||||||||||||||| | || |||| | |||||||||||||||||||||| || ||||||| ||| ||||||||    
T  30682973 acaaaattttaaggtgaggggatggtgccc-agtccaaggcagggaagatcttcgggctcaaagaacacttacaaaagtatttacattt 30682886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 263 - 337
Target Start/End: Complemental strand, 11610413 - 11610339
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaag 337  Q
    |||||||||||||||||||||||||||||| || ||| |||| |||| ||||||||| ||| |||| ||||||||    
T  11610413 aaaattttagggtgaggggatggtgccccagtccaagataagtaagaccttcgggcttaaacagcacttacaaag 11610339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 43288205 - 43288119
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||| ||||||||||||||||||||| ||| || |||| | |||||| |||||| |||||| | || ||||||||||||||||||||    
T  43288205 aaaaatttagggtgaggggatggtgctccagtccaaggcagggaagaccttcggactcaaaaatcaattacaaaggtaattacattt 43288119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 349
Target Start/End: Complemental strand, 4840272 - 4840187
Alignment:
Q  264 aaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||||||||||||||||||||| | || |||| | |||||| ||| || ||||||||||| |||||| |||||| ||||||    
T  4840272 aaattttagggtgaggggatggtgccctagtccaaggcagggaagacctttggactcaaagagcacttacaatggtaatgacattt 4840187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 14782392 - 14782330
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  |||| |||||||||||| |||||||||||||||||    
T  14782392 ttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 14782330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 44726067 - 44726005
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  |||| |||||||||||| |||||||||||||||||    
T  44726067 ttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 44726005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 21355004 - 21355069
Alignment:
Q  284 ggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||| || |||| | |||||| ||||||| |||||||||| ||||||||||||||||||||    
T  21355004 ggtgccccagtccaaggcagggaagaccttcgggttcaaagagcacttacaaaggtaattacattt 21355069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 455 - 523
Target Start/End: Complemental strand, 13478381 - 13478313
Alignment:
Q  455 ttgtggtattcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtag 523  Q
    |||| |||||||||||| || ||||||||||  ||||||||||||||| ||||| || |||||||||||    
T  13478381 ttgtagtattcaaaatcttttaaatttcgaaggattgtttaataaattagatttcgttggattttgtag 13478313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 7466284 - 7466346
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  | || |||||||||||| |||||||||||||||||    
T  7466284 ttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 7466346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 18306218 - 18306156
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  | || |||||||||||| |||||||||||||||||    
T  18306218 ttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 18306156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 18958984 - 18958922
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    |||| |||||||||||||| | ||||  |||| |||||||||||| |||||||||||||||||    
T  18958984 ttgtagtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 18958922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 433
Target Start/End: Complemental strand, 19718134 - 19718076
Alignment:
Q  375 ggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||| | ||||  |||| |||||||||||| |||||||||||||||||    
T  19718134 ggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 19718076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 435
Target Start/End: Complemental strand, 29930903 - 29930837
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattt-taaaaaagtcttgaggtattcaatcaagacttt 435  Q
    |||||||||||||||||||||| |||||||||| ||||||| |||||   ||||||||||| |||||    
T  29930903 tttgtggtattcaatcaagattatttgtcatttataaaaaaatcttgtattattcaatcaaaacttt 29930837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 42306042 - 42305980
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||| ||||||||||||| | ||||  |||| |||||||||||| |||||||||||||||||    
T  42306042 ttgtgatattcaatcaagaatttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 42305980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 371 - 436
Target Start/End: Original strand, 32497432 - 32497497
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt 436  Q
    ||||||||||||||||||| | |||   | || |||||||||||| ||||||||||||||||||||    
T  32497432 ttgtggtattcaatcaagactttttacaacttaaaaaaagtcttgtggtattcaatcaagactttt 32497497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 370 - 431
Target Start/End: Complemental strand, 32711540 - 32711479
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    |||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  32711540 tttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaga 32711479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 4031515 - 4031455
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||| ||||||| | ||||  |||| |||||||||||| |||||||||||||||    
T  4031515 ttgtggtattcgatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 4031455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 5576878 - 5576818
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  5576878 ttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 5576818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Original strand, 8543514 - 8543574
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||| |||| |||||||||||||||| |||| |||||||||||  |||||||||| ||||    
T  8543514 ttgtgttatttaatcaagattctttgttatttaaaaaaagtcttatggtattcaattaaga 8543574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 23115425 - 23115365
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  23115425 ttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 23115365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 42735534 - 42735474
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  42735534 ttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 42735474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 42938374 - 42938314
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  42938374 ttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaga 42938314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Original strand, 43959607 - 43959667
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  43959607 ttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 43959667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 458 - 521
Target Start/End: Complemental strand, 8410526 - 8410463
Alignment:
Q  458 tggtattcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgt 521  Q
    ||||||||||||||||| |||||| |||  |||||||| ||||||||| ||||  |||||||||    
T  8410526 tggtattcaaaatcattgaaatttggaaggattgtttactaaattggactttgatggattttgt 8410463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 436
Target Start/End: Complemental strand, 9771026 - 9770967
Alignment:
Q  377 tattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt 436  Q
    ||||||||||||| ||||| |||||| |||||||||  |  |||||||||||||||||||    
T  9771026 tattcaatcaagaatctttctcatttaaaaaaagtcacgttgtattcaatcaagactttt 9770967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 433
Target Start/End: Original strand, 16362144 - 16362207
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    |||||||||||||||||||| | ||||| | || |||||| ||||| | |||||||||||||||    
T  16362144 tttgtggtattcaatcaagactttttgtaacttaaaaaaaatcttgtgatattcaatcaagact 16362207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 433
Target Start/End: Complemental strand, 4302846 - 4302813
Alignment:
Q  400 ttttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||| ||||||||||||||||||    
T  4302846 ttttaaaaaagtctttaggtattcaatcaagact 4302813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 349
Target Start/End: Original strand, 24475024 - 24475081
Alignment:
Q  292 aatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||| | | |||| ||||||||||||||| || ||||||||||| ||||||||    
T  24475024 aatctaaggcaggaaagaccttcgggctcaaagaacacttacaaaggtatttacattt 24475081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 2705076 - 2705016
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   | || |||||||||||| | |||||||||||||    
T  2705076 ttgtggtattcaatcaagactctttccaaattaaaaaaagtcttgtgttattcaatcaaga 2705016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 461 - 509
Target Start/End: Complemental strand, 9770545 - 9770497
Alignment:
Q  461 tattcaaaatcattcaaatttcgaattattgtttaataaattggatttt 509  Q
    |||||||||| ||||||||||| ||  ||| ||||||||||||||||||    
T  9770545 tattcaaaataattcaaatttcaaagaattatttaataaattggatttt 9770497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 400 - 436
Target Start/End: Complemental strand, 37567401 - 37567365
Alignment:
Q  400 ttttaaaaaagtcttgaggtattcaatcaagactttt 436  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  37567401 ttttaaaaaagtctttaggtattcaattaagactttt 37567365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 371 - 431
Target Start/End: Original strand, 41479046 - 41479106
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||| ||| | |||||||||||||    
T  41479046 ttgtggtattcaatcaagactctttccaatttaaaaaaagttttgtgttattcaatcaaga 41479106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 161; Significance: 1e-85; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 371 - 592
Target Start/End: Complemental strand, 4240667 - 4240446
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||       || ||||||||||||||||    
T  4240667 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaat 4240568  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
    |||||||||||||||  |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |    
T  4240567 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaatagatgagatttctt 4240468  T
Q  571 gagattgtttttcttttaaaag 592  Q
    ||||||||||||||||||||||    
T  4240467 gagattgtttttcttttaaaag 4240446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 5949100 - 5949320
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||| |||        | ||||||||||||||||    
T  5949100 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaa-tcttgtggtattcaaaat 5949198  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
    |||||||||||||||  |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |    
T  5949199 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 5949298  T
Q  571 gagattgtttttcttttaaaag 592  Q
    ||||||||||||||||||||||    
T  5949299 gagattgtttttcttttaaaag 5949320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 371 - 592
Target Start/End: Complemental strand, 1461353 - 1461132
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |||       || ||| | ||||||||||    
T  1461353 ttgtggtattcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgctattcaaaat 1461254  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
    |||||||||||||||  |||||||||||||||||||||||  |||||||||| |||||||||||||||||||| | |||||||||||||||||||||| |    
T  1461253 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtactgtaattttaacaagaaaaaatctttcatgaaaagatgagatttctt 1461154  T
Q  571 gagattgtttttcttttaaaag 592  Q
    ||||||||||||||||||||||    
T  1461153 gagattgtttttcttttaaaag 1461132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 371 - 592
Target Start/End: Complemental strand, 40013917 - 40013696
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||        | ||||| ||||||||||    
T  40013917 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtgttattcaaaat 40013818  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
    |||||||||||||||  |||||||||| |||||||||||   ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |    
T  40013817 cattcaaatttcgaaggattgtttaatcaattggattttaatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 40013718  T
Q  571 gagattgtttttcttttaaaag 592  Q
    |||||||||||| |||| ||||    
T  40013717 gagattgtttttgtttttaaag 40013696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 371 - 592
Target Start/End: Complemental strand, 1152318 - 1152087
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||       || ||||||||||||||||    
T  1152318 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttttatcacttaaaaaaagtcttgtggtattcaaaat 1152219  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    ||||||||||||||   ||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  1152218 cattcaaatttcgagggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagat 1152119  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||| | |||||||||||||||||||||    
T  1152118 gagatttcttaagattgtttttcttttaaaag 1152087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 371 - 592
Target Start/End: Complemental strand, 14000320 - 14000089
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||  ||       || ||||||||||||||||    
T  14000320 ttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 14000221  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    ||||||||||| |||  |||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  14000220 cattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 14000121  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||| ||||||||||||| |||||||||    
T  14000120 gagatttcttgagattgtttttattttaaaag 14000089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 370 - 592
Target Start/End: Original strand, 13925921 - 13926153
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaa 469  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||  |||       || |||||||||||||||    
T  13925921 tttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattacttaaaaaaagtcttgtggtattcaaaa 13926020  T
Q  470 tcattcaaatttcgaattattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaaga 559  Q
    ||||||||||||||||  ||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  13926021 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcaagaaaaga 13926120  T
Q  560 tgagatttcctgagattgtttttcttttaaaag 592  Q
    ||| ||||| |||||||||||||||| ||||||    
T  13926121 tgatatttcttgagattgtttttcttctaaaag 13926153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 371 - 587
Target Start/End: Complemental strand, 4550472 - 4550246
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||       || ||||||||||||||||    
T  4550472 ttgtggtattcaatcaagactctttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaat 4550373  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          |||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||    
T  4550372 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaagagtctttcatgaaaagat 4550273  T
Q  561 gagatttcctgagattgtttttctttt 587  Q
    |||||||  ||||||||||||| ||||    
T  4550272 gagatttgttgagattgtttttttttt 4550246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 380 - 592
Target Start/End: Complemental strand, 7947779 - 7947557
Alignment:
Q  380 tcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcattcaaat 479  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||       || ||| | |||||||||||||||||||    
T  7947779 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgatattcaaaatcattcaaat 7947680  T
Q  480 ttcgaattattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcc 569  Q
    ||||||  |||||||||||||||||||||||          ||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||     
T  7947679 ttcgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagaagagatttct 7947580  T
Q  570 tgagattgtttttcttttaaaag 592  Q
    ||| |||||||||||||||||||    
T  7947579 tgaaattgtttttcttttaaaag 7947557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 371 - 583
Target Start/End: Original strand, 22746288 - 22746502
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||| |||       || ||||| ||||||||||    
T  22746288 ttgtggtattcaatcaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtgatattcaaaat 22746387  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtag--tgtaattttaacaagaaaaagtatttcatgaaaagatgagatttc 568  Q
    |||||||||||||||| |||||||||||||||| ||||||  ||||||||| |  |||||||||||||||||||| | |||||||||||||| |||||||    
T  22746388 cattcaaatttcgaatgattgtttaataaattgaattttgatggattttgtgggatgtaattttaacaagaaaaactctttcatgaaaagataagatttc 22746487  T
Q  569 ctgagattgtttttc 583  Q
     | ||||||||||||    
T  22746488 ttaagattgtttttc 22746502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 37013905 - 37014116
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||       || ||| ||||||||||||    
T  37013905 ttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcggtattcaaaat 37014004  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
    |||||||||||||||   ||||||||||||||          |||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |    
T  37014005 cattcaaatttcgaagggttgtttaataaatt----------ggattttgtagtataattttaacaagaaaaagtctttcataaaaagatgagatttctt 37014094  T
Q  571 gagattgtttttcttttaaaag 592  Q
    ||||||||||||||||||||||    
T  37014095 gagattgtttttcttttaaaag 37014116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 407 - 592
Target Start/End: Original strand, 39852372 - 39852567
Alignment:
Q  407 aaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcattcaaatttcgaattattgtttaataaattggat 506  Q
    |||||||||||||||||||||||||||| |||||  ||       || |||||||||||||||||||||||||||||||  |||||||| ||||||||||    
T  39852372 aaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttactaaattggat 39852471  T
Q  507 tttg----------tgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcctgagattgtttttcttttaaaag 592  Q
    ||||          ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||    
T  39852472 tttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttgttttaaaag 39852567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 371 - 582
Target Start/End: Original strand, 21147058 - 21147279
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||| |||       || | ||||||||||||||    
T  21147058 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 21147157  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||    
T  21147158 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 21147257  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| |  ||||||||||    
T  21147258 gagatttcttaggattgttttt 21147279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 371 - 568
Target Start/End: Complemental strand, 5273134 - 5272927
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| |||||||||||  ||||||||||||||||| || |||  ||       || | ||||||||||||||    
T  5273134 ttgtgctattcaatcaagattctttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaat 5273035  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||| ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| |||||| |||| ||    
T  5273034 cattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacat 5272935  T
Q  561 gagatttc 568  Q
    ||||||||    
T  5272934 gagatttc 5272927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 375 - 510
Target Start/End: Complemental strand, 14465438 - 14465303
Alignment:
Q  375 ggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcatt 474  Q
    ||||||||||||||| |||||||||||| |||||||| ||  ||||||||||||||||| ||||||||||       || ||||||||||||||||||||    
T  14465438 ggtattcaatcaagactctttgtcatttaaaaaaagttttctggtattcaatcaagactcttcatcgcttaaaaaaagtcttgtggtattcaaaatcatt 14465339  T
Q  475 caaatttcgaattattgtttaataaattggattttg 510  Q
    |||||||||||  |||||||||||||| ||||||||    
T  14465338 caaatttcgaaagattgtttaataaatcggattttg 14465303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 370 - 568
Target Start/End: Original strand, 139263 - 139471
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaa 469  Q
    |||||| |||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||| ||| |||       || | |||||||||||||    
T  139263 tttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaa 139362  T
Q  470 tcattcaaatttcgaattattgtttaataaa----------ttggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaaga 559  Q
    ||||||||||||||||  |||||||||||||           |||||||||| |||||||  |||| |||||||| | |||||||| |||||| |||| |    
T  139363 tcattcaaatttcgaaggattgtttaataaaccagattttgatggattttgttggattttccagtgaaattttaatatgaaaaagtctttcataaaaaca 139462  T
Q  560 tgagatttc 568  Q
    |||||||||    
T  139463 tgagatttc 139471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 371 - 582
Target Start/End: Complemental strand, 33656258 - 33656035
Alignment:
Q  371 ttgtggtattcaatcaagattcttt--gtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaa 468  Q
    ||||| |||||||||||||||||||  ||||||| |||||||||||| ||||||||||||||||| || ||| |||        | |  |||||||||||    
T  33656258 ttgtgttattcaatcaagattctttttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctaatggtattcaaa 33656159  T
Q  469 atcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaag 558  Q
    |||||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| |||||||||||     
T  33656158 atcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaat 33656059  T
Q  559 atgagatttcctgagattgttttt 582  Q
    |||||||||| |  ||||||||||    
T  33656058 atgagatttcttaggattgttttt 33656035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 371 - 568
Target Start/End: Complemental strand, 7016954 - 7016747
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| |||||   |||| ||||||||||||  |||||||||||||||| || ||| |||       || | ||||||||||||||    
T  7016954 ttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 7016855  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| |||||| |||| ||    
T  7016854 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacat 7016755  T
Q  561 gagatttc 568  Q
    ||||||||    
T  7016754 gagatttc 7016747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 377 - 582
Target Start/End: Complemental strand, 9220916 - 9220711
Alignment:
Q  377 tattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcattca 476  Q
    ||||||||||| | ||||||||||||  ||||||||||| | ||||||||||||||| || ||| |||       || || || ||||||||||||||||    
T  9220916 tattcaatcaaaactctttgtcatttagaaaaagtcttgtgatattcaatcaagactctttatcacttaaaaaaagtcttatgatattcaaaatcattca 9220817  T
Q  477 aatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcctgagatt 576  Q
    |||||| ||  |||||||||| |||| || ||||| ||||||| ||||  |||||||||| |||||||| |||| |||||| |||| ||||| |  ||||    
T  9220816 aatttctaaggattgtttaatgaattagaatttgtaggattttatagtaaaattttaacacgaaaaagtctttcgtgaaaacatgatatttcttaggatt 9220717  T
Q  577 gttttt 582  Q
    ||||||    
T  9220716 gttttt 9220711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 371 - 521
Target Start/End: Complemental strand, 32158113 - 32157962
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgctt-nnnnnnngttttgtggtattcaaaa 469  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||   | ||| |||        || | |||||||||||||    
T  32158113 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacccctaatcacttaaaaaaaagtctagtggtattcaaaa 32158014  T
Q  470 tcattcaaatttcgaattattgtttaataaattggattttgtgggattttgt 521  Q
    ||||||||||||||||  ||||||||||||||| |||||||  |||||||||    
T  32158013 tcattcaaatttcgaaggattgtttaataaattagattttgacggattttgt 32157962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 371 - 521
Target Start/End: Complemental strand, 27459164 - 27459015
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||| ||||||||||||||||| ||||||||||||  |||||||||||||||| || ||| |||       || | ||||||||||||||    
T  27459164 ttgtgttattcaattaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcactt-aaaaaagtctagtggtattcaaaat 27459066  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgt 521  Q
    |||||| |||| |||  ||||||||||||||| |||||||  |||||||||    
T  27459065 cattcagattttgaaggattgtttaataaattagattttgatggattttgt 27459015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 17064456 - 17064370
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||||||| || |||| | |||||| ||||||||| |||||||| ||||||||||| ||||||||    
T  17064456 aaaattttagggtgaggggatggtgccccagtccaaggcagggaagaccttcgggcttaaagagcacttacaaaggtatttacattt 17064370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 377 - 520
Target Start/End: Original strand, 6460789 - 6460932
Alignment:
Q  377 tattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcattca 476  Q
    |||||||||||||||||||||||||| ||||||||| ||  |||||||||||||||| || |||  ||        | | ||||||||||||||||||||    
T  6460789 tattcaatcaagattctttgtcatttaaaaaaagtcatgtcgtattcaatcaagactcttaatcatttaaaaaaaatctagtggtattcaaaatcattca 6460888  T
Q  477 aatttcgaattattgtttaataaattggattttgtgggattttg 520  Q
    |||||||||   |||||||||||||  |||||||  ||||||||    
T  6460889 aatttcgaaggtttgtttaataaatcagattttgatggattttg 6460932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 405 - 557
Target Start/End: Original strand, 849172 - 849334
Alignment:
Q  405 aaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcattcaaatttcgaattattgtttaataaat--- 501  Q
    ||||||||||| ||||||||||||||||| || ||| |||       || |  ||||||||||||||||||||||||||||  ||||||||||||||       
T  849172 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 849271  T
Q  502 -------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaa 557  Q
           | |||||||||||||||| ||||| ||||||| || |||||||| |||||||||||    
T  849272 attttgatagattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 849334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 20983006 - 20983088
Alignment:
Q  267 ttttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||| || |||| | ||||||  ||||||||||||||||| ||||||| |||||| |||||    
T  20983006 ttttagggtgaggggatggtgccccagtccaaggcagggaagactttcgggctcaaagagcacttacaaatgtaattgcattt 20983088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 348
Target Start/End: Complemental strand, 37976686 - 37976598
Alignment:
Q  260 cacaaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacatt 348  Q
    ||||||||||||||||||||||||||||||||| |  |||| | | || | ||||||||||||| |||| ||||||||||| |||||||    
T  37976686 cacaaaattttagggtgaggggatggtgccccagttcaaggcaggaaaaaccttcgggctcaaatagcacttacaaaggtatttacatt 37976598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 5273176 - 5273116
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||| ||||||||||||||| |||||||||| |||||||||||| | |||||||||||||    
T  5273176 ttgtgttattcaatcaagattttttgtcatttaaaaaaagtcttgtgctattcaatcaaga 5273116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 510
Target Start/End: Original strand, 9689654 - 9689787
Alignment:
Q  374 tggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcat 473  Q
    |||||||||||||||| |||| ||||||| ||||||   | | ||||||||||||||||| |||||| |||       || |||||||||| ||||||||    
T  9689654 tggtattcaatcaagactctt-gtcatttaaaaaaaca-tcgtggtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatttaaaatcat 9689751  T
Q  474 tcaaatttcgaattattgtttaataaattggattttg 510  Q
    | ||||||||||| ||||||| ||||||| |||||||    
T  9689752 t-aaatttcgaatgattgtttgataaattagattttg 9689787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 16894117 - 16894055
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||| |||||||   |||| |||||||||||| |||||||||||||||||    
T  16894117 ttgtggtattcaatcaaaattctttccaatttaaaaaaagtcttgtggtattcaatcaagact 16894055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 41910957 - 41910871
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||| |||||||||||||||||||| |  |||| |  |||||  |||||||||||||| || |||||||| |||||||||||    
T  41910957 aaaattttaaggtgaggggatggtgccccagttcaaggcagagaagacattcgggctcaaagaacacttacaaagttaattacattt 41910871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 371 - 436
Target Start/End: Complemental strand, 5273218 - 5273153
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt 436  Q
    |||||||||||||||||||||||||   |||| |||||||||||| | ||||||||||||| ||||    
T  5273218 ttgtggtattcaatcaagattctttccaatttaaaaaaagtcttgtgttattcaatcaagattttt 5273153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 1152360 - 1152298
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    |||||||||| |||||||||| ||||  | || |||||||||||| |||||||||||||||||    
T  1152360 ttgtggtatttaatcaagattttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 1152298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 4550514 - 4550452
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  | || |||||||||||| |||||||||||||||||    
T  4550514 ttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 4550452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 14000362 - 14000300
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  |||| |||||| ||||| |||||||||||||||||    
T  14000362 ttgtggtattcaatcaagactttttgcaatttaaaaaaaatcttgtggtattcaatcaagact 14000300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 37013863 - 37013925
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  | || |||||||||||| |||||||||||||||||    
T  37013863 ttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 37013925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 40013959 - 40013897
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||| ||||||||||||| | ||||  |||| |||||||||||| |||||||||||||||||    
T  40013959 ttgtgatattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 40013897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 502 - 582
Target Start/End: Complemental strand, 27459024 - 27458944
Alignment:
Q  502 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcctgagattgttttt 582  Q
    |||||||||||||||||| ||||| ||||||| || |||||| |  |||||||||| |||| ||||| |  ||||||||||    
T  27459024 tggattttgtgggattttctagtgaaattttagcatgaaaaaatcattcatgaaaacatgatatttcttaggattgttttt 27458944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 33656300 - 33656240
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  33656300 ttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaga 33656240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 433
Target Start/End: Complemental strand, 4240710 - 4240647
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    |||||||||||||||||||| | ||||  | || |||||| ||||| |||||||||||||||||    
T  4240710 tttgtggtattcaatcaagactttttgcaacttaaaaaaaatcttgtggtattcaatcaagact 4240647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 433
Target Start/End: Original strand, 5949057 - 5949120
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    |||||||||||||||||| | | ||||  | || |||||||||||| |||||||||||||||||    
T  5949057 tttgtggtattcaatcaaaactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 5949120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 431
Target Start/End: Original strand, 21147017 - 21147076
Alignment:
Q  372 tgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    |||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  21147017 tgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 21147076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 477 - 519
Target Start/End: Complemental strand, 1511451 - 1511409
Alignment:
Q  477 aatttcgaattattgtttaataaattggattttgtgggatttt 519  Q
    |||||||||  ||||||||||| ||||||||||||||||||||    
T  1511451 aatttcgaagaattgtttaatagattggattttgtgggatttt 1511409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 436
Target Start/End: Complemental strand, 26806611 - 26806578
Alignment:
Q  403 taaaaaagtcttgaggtattcaatcaagactttt 436  Q
    ||||||||||||| ||||||||||||||||||||    
T  26806611 taaaaaagtcttgtggtattcaatcaagactttt 26806578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 400 - 436
Target Start/End: Original strand, 17518474 - 17518510
Alignment:
Q  400 ttttaaaaaagtcttgaggtattcaatcaagactttt 436  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  17518474 ttttaaaaaagtcttgtggtattcaatcaagattttt 17518510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 157; Significance: 4e-83; HSPs: 85)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 371 - 592
Target Start/End: Complemental strand, 28740501 - 28740280
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||       || ||||||||||||||||    
T  28740501 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaat 28740402  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
    |||||||||||||||  |||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||| |    
T  28740401 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcataaaaagatgagatttctt 28740302  T
Q  571 gagattgtttttcttttaaaag 592  Q
    ||||||||||||||||||||||    
T  28740301 gagattgtttttcttttaaaag 28740280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 10657398 - 10657629
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||       || ||||||||||||||||    
T  10657398 ttgtggtattcaatcaagatcctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaat 10657497  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||| ||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10657498 cattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 10657597  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
    || ||||| |||||||||||||||||||||||    
T  10657598 gaaatttcttgagattgtttttcttttaaaag 10657629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 371 - 591
Target Start/End: Complemental strand, 13833640 - 13833420
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| | ||| ||||||||||||||||||||  |||||||||||||||||||||| |||       || || |||||||||||||    
T  13833640 ttgtggtattcaatcaagactttttatcattttaaaaaagtcttgatatattcaatcaagacttttcatcacttaaaaaaagtcttctggtattcaaaat 13833541  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
    ||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |    
T  13833540 cattcaaattttgaaggattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgacaagatgagatttctt 13833441  T
Q  571 gagattgtttttcttttaaaa 591  Q
    ||||||| |||||||||||||    
T  13833440 gagattgcttttcttttaaaa 13833420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 28844547 - 28844778
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||       || ||||||||||||||||    
T  28844547 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaat 28844646  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          |||||||||||| |||||||||||||||||||| |||||||||| |||||| |||||||    
T  28844647 cattcaaatttcgaaggattgtttaataaattagattttgatggattttgtggaattttgtagtgtaattttaataagaaaaagtctttcataaaaagat 28844746  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||| |||||||||||||||||||||||    
T  28844747 gagatttcttgagattgtttttcttttaaaag 28844778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 33135615 - 33135845
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||       || | ||||||||||||||    
T  33135615 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaat 33135714  T
Q  471 cattcaaatttcgaattattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||| |||||| |||| ||    
T  33135715 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat-aaaaaat 33135813  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||| |||||||||||||||||||||||    
T  33135814 gagatttcttgagattgtttttcttttaaaag 33135845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 372 - 592
Target Start/End: Original strand, 25288152 - 25288382
Alignment:
Q  372 tgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatc 471  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||        | |||||||||||||||||    
T  25288152 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcattcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaatc 25288251  T
Q  472 attcaaatttcgaattattgtttaataaattggattt----------tgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatg 561  Q
    ||||||||||||||  |||||||||||||||||||||          ||||||||||||||||||||||||||||||| || || |||||||||||||||    
T  25288252 attcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagagaacgtctttcatgaaaagatg 25288351  T
Q  562 agatttcctgagattgtttttcttttaaaag 592  Q
    ||||||| |||||||||||||||||||||||    
T  25288352 agatttcttgagattgtttttcttttaaaag 25288382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 377 - 592
Target Start/End: Original strand, 18177265 - 18177490
Alignment:
Q  377 tattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcattca 476  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||       |||||||||||||||||||||||||    
T  18177265 tattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattcaaaatcattca 18177364  T
Q  477 aatttcgaattattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatt 566  Q
    |||||||||  |||||||||| |||||||          |||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||    
T  18177365 aatttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttaataaaaagatgagatt 18177464  T
Q  567 tcctgagattgtttttcttttaaaag 592  Q
    || ||||||||||||| |||||||||    
T  18177465 tcttgagattgtttttattttaaaag 18177490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 377 - 592
Target Start/End: Original strand, 3463669 - 3463885
Alignment:
Q  377 tattcaatcaagat-tctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcattc 475  Q
    |||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||  ||       || |||||||||| ||||||||||    
T  3463669 tattcaatcaagaactctttgtcattttaaaaaagtcttgaggtgttcaatcaagacttttcatcatttaaaaaaagtcttgtggtatttaaaatcattc 3463768  T
Q  476 aaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcctgagat 575  Q
    || |||| ||  |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||    
T  3463769 aattttcaaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaatatgagatttcttgagat 3463868  T
Q  576 tgtttttcttttaaaag 592  Q
    ||||||| |||||||||    
T  3463869 tgtttttgttttaaaag 3463885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 371 - 550
Target Start/End: Original strand, 7026596 - 7026775
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||       || ||||||||||||||||    
T  7026596 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 7026695  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttc 550  Q
    |||||||||||||||  |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||    
T  7026696 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttc 7026775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 370 - 592
Target Start/End: Complemental strand, 10125511 - 10125287
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtctt--gaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaa 467  Q
    |||||||||||||||||||| ||||||||||||||||||||||||  ||| ||||||||||| |||||||||| |||       || |  || |||||||    
T  10125511 tttgtggtattcaatcaagactctttgtcattttaaaaaagtcttttgagatattcaatcaaaacttttcatcacttaaaaaaagtctcatgatattcaa 10125412  T
Q  468 aatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagattt 567  Q
    ||||||||||||||| ||  |||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||| |||||| |||| | |||||||    
T  10125411 aatcattcaaatttcaaaggattgtttaataaattgaattttgtgggattttttagtgaaattttaacaagaaaaagtctttcataaaaacacgagattt 10125312  T
Q  568 cctgagattgtttttcttttaaaag 592  Q
    | | |||||||||||||||||||||    
T  10125311 cttaagattgtttttcttttaaaag 10125287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 370 - 591
Target Start/End: Original strand, 3574838 - 3575049
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaa 469  Q
    |||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||| |||       || ||||| |||||||||    
T  3574838 tttgtggtattcaatcaagactaattgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtgatattcaaaa 3574937  T
Q  470 tcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcc 569  Q
    ||||||||||||||||  |||||||||||||||          ||||||||||||||||||||||||| ||||| |||||| | ||||| |||||||||     
T  3574938 tcattcaaatttcgaaggattgtttaataaatt----------ggattttgtagtgtaattttaacaaaaaaaaatatttcgtaaaaagttgagatttct 3575027  T
Q  570 tgagattgtttttcttttaaaa 591  Q
    ||||||||||||||||||||||    
T  3575028 tgagattgtttttcttttaaaa 3575049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 372 - 592
Target Start/End: Complemental strand, 6224765 - 6224554
Alignment:
Q  372 tgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnn-gttttgtggtattcaaaat 470  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||        || ||||||||||||||||    
T  6224765 tgtggtatttaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcactttaaaaaaagtcttgtggtattcaaaat 6224666  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
     ||||||||||||||  ||| ||||||||||||||||||||          |||||||||||||||||||||||| |||||||||||||||||||||| |    
T  6224665 tattcaaatttcgaaggattatttaataaattggattttgt----------agtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 6224576  T
Q  571 gagattgtttttcttttaaaag 592  Q
    || |||||||||||||||||||    
T  6224575 gatattgtttttcttttaaaag 6224554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 26788776 - 26789006
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatc--gcttnnnnnnngttttgtggtattcaaa 468  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||   |         || ||||||||||||||    
T  26788776 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattcaaaaaaaaagtcttgtggtattcaaa 26788875  T
Q  469 atcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaag 558  Q
    ||||||||||||| |||  ||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||| ||||||   |||    
T  26788876 atcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat---aag 26788972  T
Q  559 atgagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||||| ||||||||||||| |||||||||    
T  26788973 atgagatttcttgagattgtttttattttaaaag 26789006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 371 - 591
Target Start/End: Original strand, 378929 - 379149
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| | ||||  | || |||||||||||| ||||||||||||| ||||||  ||  ||       ||||  |||||||||||||    
T  378929 ttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaaaactttttctcatttaaaaaaagtttcatggtattcaaaat 379028  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
    ||||||||||| |||  |||||||||||||||||||||||   |||||||||||||||||||||||||||||| |  ||||||||||||||||||||  |    
T  379029 cattcaaattttgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaagaaaaaatcgttcatgaaaagatgagatttatt 379128  T
Q  571 gagattgtttttcttttaaaa 591  Q
    |||||||||||||||||||||    
T  379129 gagattgtttttcttttaaaa 379149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 371 - 592
Target Start/End: Complemental strand, 215443 - 215225
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||| |||       || | ||||||||||||||    
T  215443 ttgtggtattcaatcaagactctttgtcaattttaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaat 215344  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
    |||||||| ||| ||  ||||||| ||   ||  | |   | |||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |    
T  215343 cattcaaacttcaaaggattgtttgattgttt--aataaattggattttgtagtgtaattttaaca-gaaaaagtctttcatgaaaagatgagatttcat 215247  T
Q  571 gagattgtttttcttttaaaag 592  Q
    ||||||||||||||||||||||    
T  215246 gagattgtttttcttttaaaag 215225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 371 - 582
Target Start/End: Complemental strand, 22551981 - 22551760
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||| |||       || | ||||||||||||||    
T  22551981 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaat 22551882  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
     ||||||||||||||| |||||||| |||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||    
T  22551881 tattcaaatttcgaatgattgtttattaaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttcatgaaaacat 22551782  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| |  ||||||||||    
T  22551781 gagatttcttatgattgttttt 22551760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 371 - 582
Target Start/End: Original strand, 16269683 - 16269904
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||| |||       || | ||||||||||||||    
T  16269683 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 16269782  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||    
T  16269783 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttagcatgaaaaagtctttcatgaaaacat 16269882  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| |  ||||||||||    
T  16269883 gagatttcttaggattgttttt 16269904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 371 - 582
Target Start/End: Original strand, 24776347 - 24776568
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||| |||       || | ||||||||||||||    
T  24776347 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 24776446  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||    
T  24776447 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 24776546  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| |  ||||||||||    
T  24776547 gagatttcttaggattgttttt 24776568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 371 - 582
Target Start/End: Original strand, 12407372 - 12407593
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||| || ||| |||       || | ||||||||||||||    
T  12407372 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaaaat 12407471  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    ||||||||||| |||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||    
T  12407472 cattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaccatgaaaaagtctttcatgaaaacat 12407571  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| | |||||||||||    
T  12407572 gagatttcttaagattgttttt 12407593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 371 - 582
Target Start/End: Original strand, 20605228 - 20605449
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||| |||       || | ||||||||||||||    
T  20605228 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 20605327  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||| ||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||    
T  20605328 cattaaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 20605427  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| |  ||||||||||    
T  20605428 gagatttcttaggattgttttt 20605449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 371 - 582
Target Start/End: Complemental strand, 31170842 - 31170621
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||| |||       || | ||||||||||||||    
T  31170842 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 31170743  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||| ||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||    
T  31170742 cattcaaatttccaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 31170643  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| |  ||||||||||    
T  31170642 gagatttcttaggattgttttt 31170621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 371 - 582
Target Start/End: Complemental strand, 14198795 - 14198574
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| ||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||| || ||| |||       ||   ||||||||||||||    
T  14198795 ttgtgttattcaatcaaaattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaaaat 14198696  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||| | ||||||||||| ||    
T  14198695 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacat 14198596  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| |  ||||||||||    
T  14198595 gagatttcttaggattgttttt 14198574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 371 - 582
Target Start/End: Original strand, 43847638 - 43847859
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||| |||       || | || |||||||||||    
T  43847638 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagttgtattcaaaat 43847737  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          |||||||||||| ||||| ||||| ||||||| || |||||||| | ||||||||| ||    
T  43847738 cattcaaatttcgaaggattgtttaataaatcagaatttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctgtcatgaaaacat 43847837  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| |  ||||||||||    
T  43847838 gagatttcttaggattgttttt 43847859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 371 - 568
Target Start/End: Complemental strand, 305683 - 305476
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| ||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||| || ||| |||       || | ||||||||||||||    
T  305683 ttgtgttattcaatcaagattatttgtcatttgaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 305584  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    ||||||||||| |||| ||||||||||||||          ||||||||||| |||||| ||||| |||||||  | |||||||| ||||||||||| ||    
T  305583 cattcaaattttgaatgattgtttaataaatcagatttcgatggattttgtgagattttctagtgaaattttagaatgaaaaagtctttcatgaaaacat 305484  T
Q  561 gagatttc 568  Q
    ||||||||    
T  305483 gagatttc 305476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 370 - 582
Target Start/End: Original strand, 35317053 - 35317275
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaa 469  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||   ||||||||||||||| || ||| |||       || | |||||||||||||    
T  35317053 tttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtaatattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaa 35317152  T
Q  470 tcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaaga 559  Q
    ||||||||||||||||  ||||||||||||||          |||||||||||| ||||| ||||| ||||||| || |||||||| ||||||||||| |    
T  35317153 tcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaaca 35317252  T
Q  560 tgagatttcctgagattgttttt 582  Q
    | ||||||| | | |||||||||    
T  35317253 taagatttcttaacattgttttt 35317275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 371 - 582
Target Start/End: Complemental strand, 5093265 - 5093044
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||  || ||| |||       || | || |||||||||||    
T  5093265 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacgcttaatcacttaaaaaaagtctagtagtattcaaaat 5093166  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    ||||||||||| |||  ||||||||||||||          |||||||||||||||||| || || ||||||| || |||||||| |||||| |||| ||    
T  5093165 cattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcataaaaacat 5093066  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| |  ||||||||||    
T  5093065 gagatttcttaggattgttttt 5093044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 371 - 521
Target Start/End: Original strand, 44765767 - 44765917
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||| || ||| |||       || | ||||||||||||||    
T  44765767 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaaaat 44765866  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgt 521  Q
    |||||||||||||||  ||||||||||||||  |||||||  |||||||||    
T  44765867 cattcaaatttcgaaagattgtttaataaataagattttgatggattttgt 44765917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 469 - 592
Target Start/End: Original strand, 43078653 - 43078786
Alignment:
Q  469 atcattcaaatttcgaattattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaag 558  Q
    |||||||||||||||||| ||||||||||||||||||          |||||||||||||| |||||||||||||||| |||||||| |||||| |||||    
T  43078653 atcattcaaatttcgaatgattgtttaataaattggattttcatggattttgtgggattttatagtgtaattttaacatgaaaaagtctttcataaaaag 43078752  T
Q  559 atgagatttcctgagattgtttttcttttaaaag 592  Q
    || ||||||| ||||||||||||| |||||||||    
T  43078753 ataagatttcttgagattgtttttgttttaaaag 43078786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 370 - 536
Target Start/End: Complemental strand, 26601419 - 26601253
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaa 469  Q
    |||||| |||| |||||||| |||||||||||  ||||||||||||  |||||||||||||||| || ||| |||       ||   |||||||||||||    
T  26601419 tttgtgttatttaatcaagactctttgtcattaaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcacgtggtattcaaaa 26601320  T
Q  470 tcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaaca 536  Q
    |||||||||||||||||  |||||||||||||  |||||||||||||||| ||||| || |||||||    
T  26601319 tcattcaaatttcgaatgtttgtttaataaatcagattttgtgggattttctagtgaaactttaaca 26601253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 261 - 349
Target Start/End: Original strand, 36836326 - 36836414
Alignment:
Q  261 acaaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||||| |||||||||||||||||||| || |||| | ||||||||||||||||||||||||| ||||||||||||||||||||    
T  36836326 acaaaattttaaggtgaggggatggtgccccagtccaaggcagggaagatcttcgggctcaaagagcacttacaaaggtaattacattt 36836414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 371 - 521
Target Start/End: Original strand, 1789434 - 1789584
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| |||||||||||  | ||||||||||| ||| || ||| |||       || | ||||||||||||||    
T  1789434 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttatgatattcaatcaaaactcttaatcacttaaaaaaagtctagtggtattcaaaat 1789533  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgt 521  Q
    |||||||||||||||  ||||||||||||||  |||||||  |||||||||    
T  1789534 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 1789584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 263 - 345
Target Start/End: Complemental strand, 5039553 - 5039471
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattac 345  Q
    |||||||||| ||||||||||||||||| | || |||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  5039553 aaaattttagagtgaggggatggtgccctagtccaaggtagggaagatcttcgggctcaaagagcacttacaaaggtaattac 5039471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 263 - 349
Target Start/End: Original strand, 36380131 - 36380217
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||||||||||||||||||||| || || |||||| |||||| |||||||||||||||||| ||||||||| ||||||||||    
T  36380131 aaaattttagggtgaggggatggtgcctcagtccaaggtagggaagaccttcgggctcaaagagcacttacaaagggaattacattt 36380217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 40156173 - 40156087
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||| |||||||||||||||||||| |  |||||| |||||| |||||||||||||||||| ||||||||||||||||||||    
T  40156173 aaaattttatggtgaggggatggtgccccagttcaaggtagggaagaccttcgggctcaaagagcacttacaaaggtaattacattt 40156087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 44650526 - 44650440
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||||||  || |||| | ||||||||||||| ||||||||||| ||||||||||||||||||||    
T  44650526 aaaattttagggtgaggggatggtgccccggtccaaggcagggaagatcttcggactcaaagagcacttacaaaggtaattacattt 44650440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 263 - 349
Target Start/End: Original strand, 45136969 - 45137055
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||||||||| |||||||||||||| || |||| | |||||| |||||||||||||||||| ||||||||||||||||||||    
T  45136969 aaaattttagggtgaagggatggtgccccagtccaaggcagggaagaccttcgggctcaaagagcacttacaaaggtaattacattt 45137055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 371 - 568
Target Start/End: Original strand, 32125242 - 32125452
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttt---tcatcgcttnnnnnnngttttgtggtattcaa 467  Q
    ||||| ||||||||||| |||||||||||||| ||||||||| || ||||||||||||||||| |   | |||  ||       ||   |||||||||||    
T  32125242 ttgtgttattcaatcaaaattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatgatcatttaaaaaaagtcaagtggtattcaa 32125341  T
Q  468 aatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaa 557  Q
    ||||||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||  ||||||| || |||||||| |||||||||||    
T  32125342 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaa 32125441  T
Q  558 gatgagatttc 568  Q
     ||||||||||    
T  32125442 tatgagatttc 32125452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 263 - 349
Target Start/End: Original strand, 2754050 - 2754136
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||||||| || |||| | |||||| ||||| |||||||||||| ||||||||||| ||||||||    
T  2754050 aaaattttagggtgaggggatggtgccccagtccaaggcagggaagaccttcgagctcaaagagcacttacaaaggtatttacattt 2754136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 17136520 - 17136434
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||||||| || ||||   |||||| |||||||||||||||||| ||||||||||| ||||||||    
T  17136520 aaaattttagggtgaggggatggtgccccagtccaaggcggggaagaccttcgggctcaaagagcacttacaaaggtatttacattt 17136434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 263 - 349
Target Start/End: Original strand, 558438 - 558524
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||||||| || |||| | |||||| ||||  |||||||||||| ||||||| ||||||||||||    
T  558438 aaaattttagggtgaggggatggtgccccattccaaggaagggaagaccttctagctcaaagagcacttacaaaagtaattacattt 558524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 3201014 - 3200928
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||| |||| |||||||||||| ||||||| |  |||||||||| |||||||||| || ||||||||||||||||||||    
T  3201014 aaaattttagggcgaggagatggtgccccagtctaaggcagagaagatcttcaggctcaaagaacacttacaaaggtaattacattt 3200928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 263 - 349
Target Start/End: Original strand, 10745231 - 10745317
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||||||| || |||| | |||| | ||||||| |||||||||| |||||||| |||||||||||    
T  10745231 aaaattttagggtgaggggatggtgccccagtccaaggcagggaataccttcgggttcaaagagcacttacaaagataattacattt 10745317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 20605144 - 20605206
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  20605144 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagact 20605206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 261 - 349
Target Start/End: Complemental strand, 33066725 - 33066637
Alignment:
Q  261 acaaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||||||| |||||||||||||||||| || ||||||  ||||| |||| ||||||||||||| |||||||| || ||||||||    
T  33066725 acaaaattttaggatgaggggatggtgccccagtccaaggtagagaagaccttcaggctcaaagagcacttacaaagatatttacattt 33066637  T

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Target: chr2; HSP #45
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 263 - 349
Target Start/End: Original strand, 25987660 - 25987747
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaa-gatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||||||||||||||||||||||||  | |||| | |||| || |||||| ||||||||||| ||||||||||||||||||||    
T  25987660 aaaattttagggtgaggggatggtgccccagaccaaggcagggaaagaccttcggactcaaagagcacttacaaaggtaattacattt 25987747  T

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Target: chr2; HSP #46
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 21638030 - 21637944
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||||| | || |||| |  ||||| ||| |||||||||||||| ||||||||||| ||||||||    
T  21638030 aaaattttagggtgaggggatggtgccctagtccaaggcagagaagacctttgggctcaaagagcacttacaaaggtatttacattt 21637944  T

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Target: chr2; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 273 - 349
Target Start/End: Original strand, 6672802 - 6672878
Alignment:
Q  273 ggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||| || |||| | |||||| |||||||||||||||||   |||||||||||||||||||    
T  6672802 ggtgaggggatggtgccccagtccaaggcagggaagaccttcgggctcaaagagcgcgtacaaaggtaattacattt 6672878  T

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Target: chr2; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 533 - 592
Target Start/End: Original strand, 7027051 - 7027110
Alignment:
Q  533 aacaagaaaaagtatttcatgaaaagatgagatttcctgagattgtttttcttttaaaag 592  Q
    ||||||||||| | |||||||||||||||||||||| ||||||||||||| |||||||||    
T  7027051 aacaagaaaaaatctttcatgaaaagatgagatttcttgagattgtttttattttaaaag 7027110  T

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Target: chr2; HSP #49
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 263 - 349
Target Start/End: Original strand, 2357075 - 2357160
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||||||| || |||| | |||||| |||||  |||||| ||||||||||| |||| ||||||||    
T  2357075 aaaattttagggtgaggggatggtgccccagtccaaggcatggaagaccttcgaactcaaa-agcatttacaatggtatttacattt 2357160  T

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Target: chr2; HSP #50
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 26690287 - 26690201
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||||||||||||||||||||| || || |||| | |||||| |||||  | |||||| || ||||||||||||||||||||    
T  26690287 aaaattttagggtgaggggatggtgcctcagtccaaggcagggaagaccttcgaacacaaagatcacttacaaaggtaattacattt 26690201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 455 - 508
Target Start/End: Complemental strand, 21370684 - 21370631
Alignment:
Q  455 ttgtggtattcaaaatcattcaaatttcgaattattgtttaataaattggattt 508  Q
    ||||||||||||||||||||||||||| ||| |||||||| |||||||||||||    
T  21370684 ttgtggtattcaaaatcattcaaattttgaagtattgtttgataaattggattt 21370631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 261 - 349
Target Start/End: Complemental strand, 21487284 - 21487195
Alignment:
Q  261 acaaaattttagggtgagggg-atggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||||||| ||||||| ||||||||||| ||||||| | ||||||  ||||||||||||||||| |||||||  || ||||||||    
T  21487284 acaaaattttaggatgagggggatggtgccccagtctaaggcagggaagactttcgggctcaaagagcacttacaaaaatatttacattt 21487195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 372 - 582
Target Start/End: Original strand, 9120119 - 9120339
Alignment:
Q  372 tgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatc 471  Q
    |||||||||||||||||| |||||   ||||||||||||||||| | ||||||||||||| | || ||| |||        | | ||| |||||||||||    
T  9120119 tgtggtattcaatcaagactctttccaattttaaaaaagtcttgtgttattcaatcaagattcttaatcacttaaaaaaaatctagtgatattcaaaatc 9120218  T
Q  472 attcaaatttcgaattattgtttaataaatt----------ggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatg 561  Q
    ||||| ||||  ||  |||||||||||||||          ||||||||||||||||| ||||| |||||||  | | |||| | ||||||||||| |||    
T  9120219 attcagattttaaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagtatggaaaaatctttcatgaaaacatg 9120318  T
Q  562 agatttcctgagattgttttt 582  Q
    ||||||| |  ||||||||||    
T  9120319 agatttcttaggattgttttt 9120339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 371 - 431
Target Start/End: Original strand, 12407330 - 12407390
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    |||||||||||||||||||||||||   ||||||||||||||||| | |||||||||||||    
T  12407330 ttgtggtattcaatcaagattcttttcaattttaaaaaagtcttgtgttattcaatcaaga 12407390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 264 - 328
Target Start/End: Original strand, 13047156 - 13047220
Alignment:
Q  264 aaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagca 328  Q
    ||||||||||||||||||||||||| ||| || |||| | |||||||||| ||||||||||||||    
T  13047156 aaattttagggtgaggggatggtgctccagtccaaggcagggaagatctttgggctcaaagagca 13047220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 7026554 - 7026616
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  |||| |||||||||||| |||||||||||||||||    
T  7026554 ttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 7026616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 26788734 - 26788796
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  |||| |||||||||||| |||||||||||||||||    
T  26788734 ttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 26788796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 371 - 436
Target Start/End: Complemental strand, 13833682 - 13833617
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt 436  Q
    ||||||||||||||||||| | ||||  | || |||||||||||| ||||||||||||||||||||    
T  13833682 ttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactttt 13833617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 431
Target Start/End: Original strand, 24776305 - 24776365
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| ||||| | |||| |||||||||||| | |||||||||||||    
T  24776305 ttgtggtattcaatcaagactctttctaatttaaaaaaagtcttgtgttattcaatcaaga 24776365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 349
Target Start/End: Original strand, 30372677 - 30372765
Alignment:
Q  261 acaaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||| ||||||||||||||| ||||| ||||| |  |||| | |||||| |||||||||||||||||| | |||||| || ||||||||    
T  30372677 acaatattttagggtgagggtatggtaccccagttcaaggcatggaagaccttcgggctcaaagagcactaacaaagatatttacattt 30372765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 215485 - 215423
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  | || |||||||||||| |||||||||||||||||    
T  215485 ttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 215423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 28844505 - 28844567
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  | || |||||||||||| |||||||||||||||||    
T  28844505 ttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 28844567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 371 - 435
Target Start/End: Original strand, 19145015 - 19145082
Alignment:
Q  371 ttgtggtattcaatcaagatt---ctttgtcattttaaaaaagtcttgaggtattcaatcaagacttt 435  Q
    ||||||||||||||||||| |   |||| |||||| ||||||| |||| |||||||||||||||||||    
T  19145015 ttgtggtattcaatcaagagtactctttatcatttaaaaaaagacttgtggtattcaatcaagacttt 19145082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 5093307 - 5093247
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  5093307 ttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 5093247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 400 - 436
Target Start/End: Original strand, 11534881 - 11534917
Alignment:
Q  400 ttttaaaaaagtcttgaggtattcaatcaagactttt 436  Q
    ||||||||||||||| |||||||||||||||||||||    
T  11534881 ttttaaaaaagtctttaggtattcaatcaagactttt 11534917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Original strand, 16269641 - 16269701
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  16269641 ttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 16269701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Original strand, 20605102 - 20605162
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  20605102 ttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 20605162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Original strand, 20605186 - 20605246
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  20605186 ttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 20605246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 22552023 - 22551963
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||||| |||   |||| |||||||||||| | |||||||||||||    
T  22552023 ttgtggtattcaatcaagattttttccaatttaaaaaaagtcttgtgttattcaatcaaga 22551963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 400 - 436
Target Start/End: Complemental strand, 34028971 - 34028935
Alignment:
Q  400 ttttaaaaaagtcttgaggtattcaatcaagactttt 436  Q
    ||||||||||||||| |||||||||||||||||||||    
T  34028971 ttttaaaaaagtctttaggtattcaatcaagactttt 34028935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 433
Target Start/End: Original strand, 3574796 - 3574859
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    |||||||||||||||||||| | ||||  | || |||||||| ||| |||||||||||||||||    
T  3574796 tttgtggtattcaatcaagactttttgcaacttaaaaaaagttttgtggtattcaatcaagact 3574859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 433
Target Start/End: Complemental strand, 10125545 - 10125490
Alignment:
Q  378 attcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    |||||||||||| ||||||  |||| |||||||| ||| |||||||||||||||||    
T  10125545 attcaatcaagactctttgcaatttaaaaaaagttttgtggtattcaatcaagact 10125490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 433
Target Start/End: Original strand, 33135576 - 33135635
Alignment:
Q  374 tggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    |||||||||||||||| | ||||  |||| |||||||| ||| |||||||||||||||||    
T  33135576 tggtattcaatcaagactttttgcaatttaaaaaaagtattgtggtattcaatcaagact 33135635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 263 - 309
Target Start/End: Original strand, 2098825 - 2098871
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaaga 309  Q
    |||||||||||||||||||||||||||||| || |||| | ||||||    
T  2098825 aaaattttagggtgaggggatggtgccccagtccaaggcagggaaga 2098871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 263 - 349
Target Start/End: Original strand, 7860145 - 7860231
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||| ||||||||| |||| || || |||| |  ||| ||||||||||||||||| || ||||||| |||  |||||||    
T  7860145 aaaattttagggagaggggatgatgcctcagtccaaggcagagaaaatcttcgggctcaaagaacacttacaaatgtatgtacattt 7860231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 429
Target Start/End: Complemental strand, 14198836 - 14198779
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaa 429  Q
    ||||||||||||||||||| ||||| | | ||||||||||||||| | |||||||||||    
T  14198836 ttgtggtattcaatcaagactctttct-aatttaaaaaagtcttgtgttattcaatcaa 14198779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 28740543 - 28740481
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||| | | ||||  | || |||||||||||| |||||||||||||||||    
T  28740543 ttgtggtattcaatcaaaactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 28740481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 429
Target Start/End: Original strand, 32125200 - 32125258
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaa 429  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||    
T  32125200 ttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaa 32125258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 371 - 431
Target Start/End: Original strand, 1789392 - 1789452
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||| | |||||   |||| |||||||||||| | |||||||||||||    
T  1789392 ttgtggtattcaatcaaaactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 1789452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 404 - 436
Target Start/End: Original strand, 7026545 - 7026577
Alignment:
Q  404 aaaaaagtcttgaggtattcaatcaagactttt 436  Q
    |||||||||||| ||||||||||||||||||||    
T  7026545 aaaaaagtcttgtggtattcaatcaagactttt 7026577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 400 - 436
Target Start/End: Complemental strand, 20157795 - 20157759
Alignment:
Q  400 ttttaaaaaagtcttgaggtattcaatcaagactttt 436  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  20157795 ttttaaagaagtctttaggtattcaatcaagactttt 20157759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 400 - 436
Target Start/End: Original strand, 24193595 - 24193631
Alignment:
Q  400 ttttaaaaaagtcttgaggtattcaatcaagactttt 436  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  24193595 ttttaaaaaagtcttggggtattcaatcaagattttt 24193631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 31170884 - 31170824
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||| ||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  31170884 ttgtgatattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 31170824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 371 - 431
Target Start/End: Original strand, 35317012 - 35317072
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||| ||| | |||||||||||||    
T  35317012 ttgtggtattcaatcaagactctttccaatttaaaaaaagttttgtgttattcaatcaaga 35317072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 371 - 431
Target Start/End: Original strand, 44765725 - 44765785
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||| | |||||   |||| |||||||||||| | |||||||||||||    
T  44765725 ttgtggtattcaatcaaaactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 44765785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 154; Significance: 2e-81; HSPs: 114)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 370 - 592
Target Start/End: Complemental strand, 44122116 - 44121894
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaa 469  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||        | |||||||||||||||    
T  44122116 tttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaa 44122017  T
Q  470 tcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcc 569  Q
    ||||||||||||||||  |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||      
T  44122016 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttaatgaaaagatgagattttt 44121917  T
Q  570 tgagattgtttttcttttaaaag 592  Q
    |||||||||||||||||||||||    
T  44121916 tgagattgtttttcttttaaaag 44121894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 18838374 - 18838605
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||       || ||||||||||||||||    
T  18838374 ttgtggtattcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaaaat 18838473  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18838474 cattcaaatttcgaaagattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 18838573  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||| |||||||||||||||||||||||    
T  18838574 gagatttcttgagattgtttttcttttaaaag 18838605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 371 - 592
Target Start/End: Complemental strand, 40460922 - 40460701
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||       || ||||||||||||||||    
T  40460922 ttgtgatattcaattaagactctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaat 40460823  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
    |||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | ||||||||||| |||||||||| |    
T  40460822 cattcaaatttcgaatgattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaatatgagatttctt 40460723  T
Q  571 gagattgtttttcttttaaaag 592  Q
    ||||||||||||||||||||||    
T  40460722 gagattgtttttcttttaaaag 40460701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 375 - 592
Target Start/End: Complemental strand, 46405642 - 46405425
Alignment:
Q  375 ggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcatt 474  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||       || ||||||||||||||||||||    
T  46405642 ggtattcaatcaagactctttgtcgttttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcatt 46405543  T
Q  475 caaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcctgaga 574  Q
    |||||||| ||| |||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||| || ||||||||||||||| |||||    
T  46405542 caaatttcaaatgattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtatttaataaaaagatgagatttcttgaga 46405443  T
Q  575 ttgtttttcttttaaaag 592  Q
    ||||||||||||||||||    
T  46405442 ttgtttttcttttaaaag 46405425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 509641 - 509862
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||  ||       || ||||||||||||||||    
T  509641 ttgtggtattcaatcaagactatttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 509740  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
    |||||||||||||||  |||||||||||||||||||||||  |||||||||||||  |||||||||||||||||| |||||||||||||||||||||| |    
T  509741 cattcaaatttcgaacgattgtttaataaattggattttgatggattttgtagtgggattttaacaagaaaaagtctttcatgaaaagatgagatttctt 509840  T
Q  571 gagattgtttttcttttaaaag 592  Q
    |||||||||||| |||||||||    
T  509841 gagattgtttttattttaaaag 509862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 3022911 - 3023142
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||| |||       || ||||||||||||||||    
T  3022911 ttgtggtattcaatcaagactttttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaat 3023010  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  3023011 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtttttcatgaaaagat 3023110  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||| |||||||||||||||||||||||    
T  3023111 gagatttcttgagattgtttttcttttaaaag 3023142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 23101283 - 23101514
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||       || ||||||||||||||||    
T  23101283 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 23101382  T
Q  471 cattcaaatttcgaattattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  23101383 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 23101482  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||| ||||||||||||| |||||||||    
T  23101483 gagatttcttgagattgtttttattttaaaag 23101514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 370 - 592
Target Start/End: Original strand, 29585499 - 29585720
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaa 469  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||       || || ||||||||||||    
T  29585499 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaaactttt-atcacttaaaaaaagtcttctggtattcaaaa 29585597  T
Q  470 tcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcc 569  Q
    |||||||||||| |||  |||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||     
T  29585598 tcattcaaattttgaaggattgtttaataatttggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgaaatttct 29585697  T
Q  570 tgagattgtttttcttttaaaag 592  Q
    |||||||||||||||||||||||    
T  29585698 tgagattgtttttcttttaaaag 29585720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 370 - 592
Target Start/End: Complemental strand, 9882452 - 9882221
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaa 469  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||       || |||||||||||||||    
T  9882452 tttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaa 9882353  T
Q  470 tcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaaga 559  Q
    ||||||||||||||||| ||||||||||||||          ||||||||||||||||||||||||||||||||| |||||||||| |||||| |||| |    
T  9882352 tcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaagaagaaaaagtctttcat-aaaaaa 9882254  T
Q  560 tgagatttcctgagattgtttttcttttaaaag 592  Q
    ||||||||| |||||||||||||||||||||||    
T  9882253 tgagatttcttgagattgtttttcttttaaaag 9882221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 37327912 - 37328133
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||       || ||||||||||||||||    
T  37327912 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattacttaaaaaaagtcttgtggtattcaaaat 37328011  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
    |||||||||||| ||  |||||||||||||||| ||||||  |||||||||||| |||||||||||| ||||||| |||||||||||||| ||||||  |    
T  37328012 cattcaaatttcaaaggattgtttaataaattgaattttgatggattttgtagtataattttaacaaaaaaaagtctttcatgaaaagataagatttttt 37328111  T
Q  571 gagattgtttttcttttaaaag 592  Q
    ||||||||||||||||||||||    
T  37328112 gagattgtttttcttttaaaag 37328133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 28342332 - 28342563
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||  ||       || ||||||||||||||||    
T  28342332 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcgagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 28342431  T
Q  471 cattcaaatttcgaattattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  28342432 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 28342531  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||| ||||||||||||| |||||||||    
T  28342532 gagatttcttgagattgtttttattttaaaag 28342563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 39784084 - 39784315
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||       || ||||||||||||||||    
T  39784084 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 39784183  T
Q  471 cattcaaatttcgaattattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||| ||||||||||  ||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  39784184 catttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 39784283  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||| ||||||||||||| |||||||||    
T  39784284 gagatttcttgagattgtttttattttaaaag 39784315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 39028082 - 39028303
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||       || ||||| ||||||||||    
T  39028082 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtgttattcaaaat 39028181  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
    | |||||||| ||||  |||||||||||||||||||||||  |||||||||||||||| |||||||||||||||| |||||||||||   |||||||| |    
T  39028182 cgttcaaattacgaaagattgtttaataaattggattttgatggattttgtagtgtaactttaacaagaaaaagtttttcatgaaaaacagagatttctt 39028281  T
Q  571 gagattgtttttcttttaaaag 592  Q
    ||||||||||||||||||||||    
T  39028282 gagattgtttttcttttaaaag 39028303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 371 - 592
Target Start/End: Complemental strand, 29614979 - 29614748
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||       || ||||| ||||||||||    
T  29614979 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtgatattcaaaat 29614880  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  |||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  29614879 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 29614780  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||| ||||||| ||||| |||||||||    
T  29614779 gagatttcttgagattatttttattttaaaag 29614748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 373 - 592
Target Start/End: Original strand, 7993129 - 7993358
Alignment:
Q  373 gtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatca 472  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||| |||       || || |||||||||||||||    
T  7993129 gtggtattcaatcaagactctttgccattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttatggtattcaaaatca 7993228  T
Q  473 ttcaaatttcgaattattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatga 562  Q
    |||||||||||||  |||||||||||||||| ||||||          ||||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  7993229 ttcaaatttcgaaggattgtttaataaattgaattttgatggattgtgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagataa 7993328  T
Q  563 gatttcctgagattgtttttcttttaaaag 592  Q
    |||||| |||||||||||||||||||||||    
T  7993329 gatttcttgagattgtttttcttttaaaag 7993358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 371 - 588
Target Start/End: Complemental strand, 28035020 - 28034793
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||| |||       || ||||||||||||||||    
T  28035020 ttgtggtattcaatcaagactttttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaat 28034921  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
     ||||||||||| ||  ||||||||||||||          |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  28034920 tattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaaaaaaagtctttcatgaaaagat 28034821  T
Q  561 gagatttcctgagattgtttttctttta 588  Q
    |||||||| |||||||||||||||||||    
T  28034820 gagatttcttgagattgtttttctttta 28034793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 375 - 567
Target Start/End: Complemental strand, 33892461 - 33892269
Alignment:
Q  375 ggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcatt 474  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |||       || ||||||||||||||||||||    
T  33892461 ggtattcaatcaacactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaacaaagtcttgtggtattcaaaatcatt 33892362  T
Q  475 caaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagattt 567  Q
    |||||||||||| |||||| |||||||||||||||   | ||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  33892361 caaatttcgaatgattgttaaataaattggatttttatgaattttgtagtgtaattttaacaagaaaaagtctttcattaaaagatgagattt 33892269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 371 - 591
Target Start/End: Original strand, 33382622 - 33382852
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||       || |  |||||||||||||    
T  33382622 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcatggtattcaaaat 33382721  T
Q  471 cattcaaatttcgaattattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||| ||||||||||  ||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  33382722 catttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagat 33382821  T
Q  561 gagatttcctgagattgtttttcttttaaaa 591  Q
    |||||||  | ||||||||||||||||||||    
T  33382822 gagatttatttagattgtttttcttttaaaa 33382852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 379 - 590
Target Start/End: Original strand, 8675326 - 8675547
Alignment:
Q  379 ttcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcattcaaa 478  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |||       || |||||||||||||||||||| |||    
T  8675326 ttcaatcaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcatttaaa 8675425  T
Q  479 tttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttc 568  Q
     ||||||  ||||||||||||||          |||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||    
T  8675426 cttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaagatgagatttc 8675525  T
Q  569 ctgagattgtttttcttttaaa 590  Q
     |||||||||||||||||||||    
T  8675526 ttgagattgtttttcttttaaa 8675547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 371 - 592
Target Start/End: Complemental strand, 44256981 - 44256750
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    |||| ||||| |||||||| | ||||||||||||||||| |||| ||||||||||||||||||||||||| |||       || | ||||||||||||||    
T  44256981 ttgtagtatttaatcaagactttttgtcattttaaaaaaatcttaaggtattcaatcaagacttttcatcacttaaaaaaagtatcgtggtattcaaaat 44256882  T
Q  471 cattcaaatttcgaattattgtttaataaattggattt----------tgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||| |||||||||||||||||||||          ||| |||||||| |||||||||||||||||||||||| |||||| |||| ||    
T  44256881 cattcaaatttcgaatgattgtttaataaattggatttggatgaattttgttggattttgcagtgtaattttaacaagaaaaagtttttcatcaaaatat 44256782  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||  |||||||||||||||||||||||    
T  44256781 gagattttttgagattgtttttcttttaaaag 44256750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 12740358 - 12740588
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||  ||       || | ||||||||||||||    
T  12740358 ttgtggtattcaatcaagattctttgtcatttttaaaaagtcttgaggtatttaatcaagatttttcatcatttaaaaaaagtctcgtggtattcaaaat 12740457  T
Q  471 cattcaaatttcgaattattgtttaataaattg---------gattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatg 561  Q
    |||||||||||| ||  |||||||||||||| |         |||||||||||||||| ||||||||||||||||||| ||||| |||||| ||||||||    
T  12740458 cattcaaatttcaaaggattgtttaataaatggattttgatagattttgtgggattttatagtgtaattttaacaagagaaagtctttcataaaaagatg 12740557  T
Q  562 agatttcctgagattgtttttcttttaaaag 592  Q
    ||||||| | |||||||||| ||||||||||    
T  12740558 agatttcttaagattgttttacttttaaaag 12740588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 371 - 557
Target Start/End: Original strand, 19251524 - 19251710
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||| |||       || | ||||||||||||||    
T  19251524 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaagtctcgtggtattcaaaat 19251623  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaa 557  Q
    |||||||||||||||  |||||||||||||||||||||||  ||||||| | ||| ||||||| ||| ||||||| |||||||||||    
T  19251624 cattcaaatttcgaaggattgtttaataaattggattttgatggattttcttgtgaaattttagcaataaaaagtctttcatgaaaa 19251710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 371 - 582
Target Start/End: Complemental strand, 17001238 - 17001037
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||| |||        | | ||||||||||||||    
T  17001238 ttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaataaagacttttcatcacttaaaaaaaatatcgtggtattcaaaat 17001139  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
    |||||||||||||||  |||||||||||||||          |||||||||||||||||| |||||||||||||| ||||||||||| |||||||||| |    
T  17001138 cattcaaatttcgaaggattgtttaataaatt----------ggattttgtagtgtaattataacaagaaaaagtctttcatgaaaatatgagatttctt 17001049  T
Q  571 gagattgttttt 582  Q
    || |||||||||    
T  17001048 gatattgttttt 17001037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 377 - 591
Target Start/End: Complemental strand, 3797266 - 3797052
Alignment:
Q  377 tattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcattca 476  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||       || ||||||||||||| |||||| |    
T  3797266 tattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaagatcattaa 3797167  T
Q  477 aatttcgaattattgtttaataaattggattttg-tgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcctgagat 575  Q
    ||||| |||  ||||||||||||||| ||||||| ||||||||| ||||| ||||||| || |||||||| ||| | ||||| || ||||||| |  |||    
T  3797166 aattttgaaggattgtttaataaattagattttgatgggattttctagtgaaattttagcatgaaaaagtcttttaagaaaacat-agatttcttaggat 3797068  T
Q  576 tgtttttcttttaaaa 591  Q
    ||||||||||||||||    
T  3797067 tgtttttcttttaaaa 3797052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 370 - 582
Target Start/End: Original strand, 973175 - 973397
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaa 469  Q
    |||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||| |||        ||| |||||||||||||    
T  973175 tttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatttagtggtattcaaaa 973274  T
Q  470 tcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaaga 559  Q
    ||||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| ||||||||||| ||||||||||| |    
T  973275 tcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaaca 973374  T
Q  560 tgagatttcctgagattgttttt 582  Q
    ||||||||| |  ||||||||||    
T  973375 tgagatttcttaggattgttttt 973397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 371 - 591
Target Start/End: Original strand, 10068451 - 10068682
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtctt-gaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaa 469  Q
    |||||||||| |||||||| |||||| ||||||||||||||||| ||||||||||||||||| |||||||| |||       || |||||||||||||||    
T  10068451 ttgtggtatttaatcaagactctttgccattttaaaaaagtctttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaa 10068550  T
Q  470 tcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaaga 559  Q
    |||||||||||| |||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || ||||||||||||||| |||| |    
T  10068551 tcattcaaattttgaaggattgtttaataaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttcataaaaaca 10068650  T
Q  560 tgagatttcctgagattgtttttcttttaaaa 591  Q
    ||||||||  |  |||||||||||||||||||    
T  10068651 tgagatttgttaggattgtttttcttttaaaa 10068682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 371 - 573
Target Start/End: Original strand, 47066688 - 47066881
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnn-gttttgtggtattcaaaa 469  Q
    ||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||| |  ||||||| |||        || |||||||||||||||    
T  47066688 ttgtggtattcaatcaaaactctttgtcattttaaaaaagtcttgacgtattcaatcaaaaaatttcatcacttaaaaaaaagtcttgtggtattcaaaa 47066787  T
Q  470 tcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcc 569  Q
    ||||||||||||||||  |||||||||||||||||||          ||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  47066788 tcattcaaatttcgaaggattgtttaataaattggat----------tttgtagtgtaattttaacaagaaaaaatatttcatgaaaagatgagatttct 47066877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 374 - 542
Target Start/End: Original strand, 32883770 - 32883948
Alignment:
Q  374 tggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcat 473  Q
    |||||||||||||||| | |||||||||||||||||||||||| ||||||||| ||||||||||||| |||       || |||||||||||||||||||    
T  32883770 tggtattcaatcaagactttttgtcattttaaaaaagtcttgaagtattcaattaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcat 32883869  T
Q  474 tcaaatttcgaattattgtttaataaattggatttt----------gtgggattttgtagtgtaattttaacaagaaaa 542  Q
    ||||||||||||| |||||||| |||||||||||||          |||||||||||||||||||||||||||||||||    
T  32883870 tcaaatttcgaatgattgtttattaaattggattttgatggatttcgtgggattttgtagtgtaattttaacaagaaaa 32883948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 377 - 583
Target Start/End: Original strand, 9179871 - 9180077
Alignment:
Q  377 tattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcattca 476  Q
    |||||||||||||||||||||||||| |||||||| |||  |||||||||||||||| |||||| |||       || ||||||||| |||||||| | |    
T  9179871 tattcaatcaagattctttgtcatttaaaaaaagttttgtcgtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatacaaaatcactta 9179970  T
Q  477 aatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcctgagatt 576  Q
    |||| ||||  |||||||||||||||||||||||||||||||| ||||| | ||||| ||  ||||||| ||||||||||| |||||||||| |  ||||    
T  9179971 aattccgaaggattgtttaataaattggattttgtgggattttctagtgaatttttagcataaaaaagtctttcatgaaaacatgagatttcttaggatt 9180070  T
Q  577 gtttttc 583  Q
    |||||||    
T  9180071 gtttttc 9180077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 377 - 582
Target Start/End: Complemental strand, 40996858 - 40996643
Alignment:
Q  377 tattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcattca 476  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || |||||||       || | ||||||||||||||||||||    
T  40996858 tattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtattcaaaatcattca 40996759  T
Q  477 aatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatt 566  Q
    |||||||||  ||||||||||||||          |||||||||| ||||||| ||||| ||||||| || |||||||| ||||||||||| ||||||||    
T  40996758 aatttcgaaggattgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 40996659  T
Q  567 tcctgagattgttttt 582  Q
    || |  ||||||||||    
T  40996658 tcttaggattgttttt 40996643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 371 - 582
Target Start/End: Original strand, 47914258 - 47914479
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| ||||||||| || ||||||||||||||||| || ||| |||       || | ||| ||||||||||    
T  47914258 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaat 47914357  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||    
T  47914358 cattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 47914457  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| | |||||||||||    
T  47914458 gagatttcttaagattgttttt 47914479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 371 - 568
Target Start/End: Complemental strand, 43581305 - 43581098
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||  |||||||||||||||| || ||| |||       || | ||||||||||||||    
T  43581305 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 43581206  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||    
T  43581205 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 43581106  T
Q  561 gagatttc 568  Q
    ||||||||    
T  43581105 gagatttc 43581098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 371 - 582
Target Start/End: Complemental strand, 7719475 - 7719254
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| ||||||||||| ||| |||||||||| |||||||||||| ||||||||||||||||| || ||| |||        | | ||||||||||||||    
T  7719475 ttgtgttattcaatcaatattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaaaat 7719376  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||| ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||    
T  7719375 cattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 7719276  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| |  ||||||||||    
T  7719275 gagatttcttaggattgttttt 7719254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 371 - 582
Target Start/End: Complemental strand, 44343611 - 44343390
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| | ||||||||||||||| || ||| |||       |||| |||||||| |||||    
T  44343611 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtgatattcaatcaagactcttaatcacttaaaaaaagtttagtggtatttaaaat 44343512  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||| ||||| ||    
T  44343511 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcacgaaaacat 44343412  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| |  ||||||||||    
T  44343411 gagatttcttaggattgttttt 44343390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 41827299 - 41827520
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| | ||||||||||||||||| ||||||||| |||||||||||||||||||  |||       || ||||||||||||||||    
T  41827299 ttgtggtattcaatcaagactttttgtcattttaaaaaaatcttgaggtgttcaatcaagacttttcataacttaaaaaaagtcttgtggtattcaaaat 41827398  T
Q  471 cattcaaatttcgaattattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
              | |||  ||||||||||||||||||          |||||||||||| |||||||||||||||||||||||| || ||||||||||| ||    
T  41827399 ----------ttgaaggattgtttaataaattggattttgatggattttgtgggattgtgtagtgtaattttaacaagaaaatgtctttcatgaaaatat 41827488  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||| |||||||||||||||||||||||    
T  41827489 gagatttcttgagattgtttttcttttaaaag 41827520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 371 - 591
Target Start/End: Original strand, 12963686 - 12963911
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||  |||       || | ||||||| ||||||    
T  12963686 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgagatattcaatcaagatttttcattacttaaaaaaagtctcgtggtatccaaaat 12963785  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| |||||||  |||||||||| |||  |      ||    
T  12963786 cattcaaatttcgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagtaagaaaaagtctttttt-----cat 12963880  T
Q  561 gagatttcctgagattgtttttcttttaaaa 591  Q
    |||||||| ||||||||||||||||||||||    
T  12963881 gagatttcttgagattgtttttcttttaaaa 12963911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 371 - 582
Target Start/End: Original strand, 12893400 - 12893621
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| |||||| |||||||||| || ||| |||       || |  |||||||||||||    
T  12893400 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaat 12893499  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          ||||||||||| |||||| ||||| ||||||| || |||||||| ||||||||||| ||    
T  12893500 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 12893599  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| |  ||||||||||    
T  12893600 gagatttcttaggattgttttt 12893621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 371 - 582
Target Start/End: Original strand, 30440788 - 30441009
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||| || ||| |||       || | ||||||||||||||    
T  30440788 ttgtgttattcaatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 30440887  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| |||||||  | |||||||| |||| |||||| ||    
T  30440888 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagtatgaaaaagtctttcgtgaaaacat 30440987  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| |  ||||||||||    
T  30440988 gagatttcttaggattgttttt 30441009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 371 - 582
Target Start/End: Complemental strand, 18914950 - 18914729
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| ||||||||||| |||||||||| ||| |||||||||||| ||||||||||||||||| || ||| |||       || | ||||||||||||||    
T  18914950 ttgtgttattcaatcaaaattctttgtcctttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 18914851  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||| ||   |||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||    
T  18914850 cattcaaatttcaaaggtttgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 18914751  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| |  ||||||||||    
T  18914750 gagatttcttaggattgttttt 18914729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 461 - 582
Target Start/End: Original strand, 19810874 - 19810995
Alignment:
Q  461 tattcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||| ||||| ||||||| ||  |||| || ||||||||||| ||    
T  19810874 tattcaaaatcattcaaatttcaaatgattgtttaataaattggattttgtggaattttctagtgaaattttagcataaaaatgtctttcatgaaaacat 19810973  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| |||||||||||||    
T  19810974 gagatttcttgagattgttttt 19810995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 371 - 582
Target Start/End: Original strand, 34695265 - 34695486
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||| ||||||||| |||||||| ||| ||||||||||||||||| || ||| |||       ||   |||||||||||||     
T  34695265 ttgtgttattcaatcaagattccttgtcatttaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaaaac 34695364  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||    
T  34695365 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 34695464  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| |  ||||||||||    
T  34695465 gagatttcttaggattgttttt 34695486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 371 - 582
Target Start/End: Original strand, 47879160 - 47879381
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| ||||||||| || ||||||||||||||||| || ||| |||       || | ||| ||||||||||    
T  47879160 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaat 47879259  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||  ||  ||||||||||||||          |||||||||||| ||||| ||||| ||||||| || |||||||| ||||||||||| ||    
T  47879260 cattcaaatttaaaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 47879359  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| | |||||||||||    
T  47879360 gagatttcttaagattgttttt 47879381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 502 - 592
Target Start/End: Complemental strand, 37972941 - 37972851
Alignment:
Q  502 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcctgagattgtttttcttttaaaag 592  Q
    ||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||    
T  37972941 tggattttgcgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatgagacttcttgagattgtttttcttttaaaag 37972851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 368 - 567
Target Start/End: Complemental strand, 44623494 - 44623295
Alignment:
Q  368 tctttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaa 467  Q
    |||||||| ||||||||||||| |||||||||||| |||||||||||| |||||| |||||||||| |||||| |||       || | ||| |||||||    
T  44623494 tctttgtgatattcaatcaagactctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttcatcactttaaaaaggtctcgtgatattcaa 44623395  T
Q  468 aatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagattt 567  Q
    ||||||||| ||||| ||  | |||||||||||||| ||||||||| ||||| ||||| |||||||  | |||||||| | |||| |||| |||| ||||    
T  44623394 aatcattcatatttctaaagactgtttaataaattgaattttgtggaattttctagtgaaattttagaatgaaaaagtctctcataaaaatatgatattt 44623295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 377 - 568
Target Start/End: Complemental strand, 20275472 - 20275271
Alignment:
Q  377 tattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcattca 476  Q
    |||||||||||||||| ||||||||| |||||||||||  ||||||||||||||||| || ||| |||       || || |||||||||||||||||||    
T  20275472 tattcaatcaagattccttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcacttaaaaaaagtcttatggtattcaaaatcattca 20275373  T
Q  477 aatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatt 566  Q
    |||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| | ||||||||  ||||||||    
T  20275372 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctgtcatgaaagcatgagatt 20275273  T
Q  567 tc 568  Q
    ||    
T  20275272 tc 20275271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 371 - 557
Target Start/End: Original strand, 727504 - 727691
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngtttt-gtggtattcaaaa 469  Q
    ||||| ||||||||||| |||||||||||||| |||||||||||| | ||||||||||| ||| || ||| |||         | | || ||||||||||    
T  727504 ttgtgttattcaatcaaaattctttgtcatttaaaaaaagtcttgtgatattcaatcaaaactctttatcacttaaaaaaaaatctagtagtattcaaaa 727603  T
Q  470 tcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaa 557  Q
    ||||||||||||| ||  ||||||||||||||  |||||||||||||||| ||||| ||||||| || |||||||| |||||||||||    
T  727604 tcattcaaatttcaaaggattgtttaataaatcagattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 727691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 261 - 349
Target Start/End: Original strand, 37095207 - 37095295
Alignment:
Q  261 acaaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||||||||| || |||| | |||||| |||||||||||||||||| ||||||||||||||||||||    
T  37095207 acaaaattttagggtgaggggatggtgccccagtccaaggcagggaagaccttcgggctcaaagagcacttacaaaggtaattacattt 37095295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 35109824 - 35109738
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||||||| || |||| | |||||| |||||||||||||||||| ||||||||||||||||||||    
T  35109824 aaaattttagggtgaggggatggtgccccagtccaaggcagggaagaccttcgggctcaaagagcacttacaaaggtaattacattt 35109738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 399 - 582
Target Start/End: Complemental strand, 7718549 - 7718356
Alignment:
Q  399 attttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcattcaaatttcgaattattgtttaata 498  Q
    |||| |||||||||||| ||||||||||||||||| || ||| |||       || | |||||||||||||||||||||||||||||  |||||||||||    
T  7718549 atttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaata 7718450  T
Q  499 aat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcctgagattgttttt 582  Q
    |||          |||||||||||||||||| ||||| ||||||| || |||||| | ||||||||||| |||||||||| |  ||||||||||    
T  7718449 aatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagatttcttaggattgttttt 7718356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 264 - 349
Target Start/End: Original strand, 38265237 - 38265322
Alignment:
Q  264 aaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||||||||||||||||||||||| || |||| | |||||| |||||||||||||||||| ||||||||||||||||||||    
T  38265237 aaattttagggtgaggggatggtgccccagtccaaggcagggaagaccttcgggctcaaagagcacttacaaaggtaattacattt 38265322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 458 - 592
Target Start/End: Complemental strand, 43187485 - 43187341
Alignment:
Q  458 tggtattcaaaatcattcaaatttcgaattattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtat 547  Q
    |||||||||||||||||||||||| |||  |||||||||||||||||||||||          | ||||||| ||||| ||||||||||||||||||| |    
T  43187485 tggtattcaaaatcattcaaattttgaagcattgtttaataaattggattttgatgaattttgtcggattttctagtgaaattttaacaagaaaaagtct 43187386  T
Q  548 ttcatgaaaagatgagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||| | |||||||||  || ||||||||||||||||||||    
T  43187385 ttcatgaagacatgagattttttgggattgtttttcttttaaaag 43187341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 371 - 508
Target Start/End: Complemental strand, 10676635 - 10676498
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    |||||||||| |||||||| ||||||  |||| ||||| |||||| |||||||||||||||||||||||| |||       || |  | |||||||||||    
T  10676635 ttgtggtatttaatcaagactctttgcaatttaaaaaaggtcttgtggtattcaatcaagacttttcatcacttaaaaaaagtctcattgtattcaaaat 10676536  T
Q  471 cattcaaatttcgaattattgtttaataaattggattt 508  Q
    |||||||||||||||  |||||||||||||||||||||    
T  10676535 cattcaaatttcgaaggattgtttaataaattggattt 10676498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 263 - 349
Target Start/End: Original strand, 245263 - 245349
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||||||| || |||| | |||||| ||||||||||||||||| ||||||||| |||||||||||    
T  245263 aaaattttagggtgaggggatggtgccccagtccaaggcagggaagaccttcgggctcaaagagcgtttacaaagataattacattt 245349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 16059356 - 16059438
Alignment:
Q  267 ttttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||| || |||||| |||||| ||||||||||| |||||| ||||||||||||||||||||    
T  16059356 ttttagggtgaggggatggtgccccagtccaaggtagggaagaccttcgggctcagagagcacttacaaaggtaattacattt 16059438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 371 - 482
Target Start/End: Original strand, 29893066 - 29893177
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||| |||       || |||| ||||| |||||    
T  29893066 ttgtggtattcaatcaagactctttgtcattttaaaacagtcatgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtagtatttaaaat 29893165  T
Q  471 cattcaaatttc 482  Q
     |||||||||||    
T  29893166 aattcaaatttc 29893177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 371 - 521
Target Start/End: Original strand, 34009004 - 34009155
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngt-tttgtggtattcaaaa 469  Q
    ||||| ||||||||||||||| |||||||||| |||||||||||| ||||||||||||| ||| || ||| |||       ||  | |||||||||||||    
T  34009004 ttgtgttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaacactcttaatcacttaaaaaaagtcctagtggtattcaaaa 34009103  T
Q  470 tcattcaaatttcgaattattgtttaataaattggattttgtgggattttgt 521  Q
    ||||||||||||||||  ||||||||||||||  |||||||  |||||||||    
T  34009104 tcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 34009155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 371 - 521
Target Start/End: Original strand, 25805677 - 25805827
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    |||||| |||||||||||||||||||| |||| |||||| ||| | ||||||||||||| | |||||||| |||         |||||||||||||||||    
T  25805677 ttgtggcattcaatcaagattctttgtaatttaaaaaaaatctagtggtattcaatcaaaatttttcatcacttaaaaaaaaatttgtggtattcaaaat 25805776  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgt 521  Q
    ||||||||||||| |  |||||||||||||||| ||| ||  |||||||||    
T  25805777 cattcaaatttcgtaggattgtttaataaattgaattatgatggattttgt 25805827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 261 - 349
Target Start/End: Complemental strand, 34721969 - 34721881
Alignment:
Q  261 acaaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||||||| | || |||| | |||||  |||||||||||||||||| ||||||||||||||||||||    
T  34721969 acaaaattttagggtgaggggatggtgcccgagtccaaggcagggaagtccttcgggctcaaagagcacttacaaaggtaattacattt 34721881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 263 - 349
Target Start/End: Original strand, 21577097 - 21577183
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||||||| || |||| | |||||| |||||| ||||||||||| ||||||||||| ||||||||    
T  21577097 aaaattttagggtgaggggatggtgccccagtccaaggcagggaagaccttcggactcaaagagcacttacaaaggtatttacattt 21577183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 371 - 524
Target Start/End: Original strand, 31638867 - 31639020
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| ||||||||||| |||||||||||||| |||||| |  || ||||||| ||||||||| || ||| |||       || | ||||||||||||||    
T  31638867 ttgtgttattcaatcaaaattctttgtcatttaaaaaaacttgtgtggtattctatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 31638966  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagt 524  Q
    |||||||||||||||  ||||||||||||||  |||||||  ||||||| ||||    
T  31638967 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttctagt 31639020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 41151306 - 41151219
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttac-aaaggtaattacattt 349  Q
    |||| ||||||||||||||||||||||||| || |||| | |||||| |||||||||||||||||| |||| ||||||||||||||||    
T  41151306 aaaaatttagggtgaggggatggtgccccagtccaaggcagggaagaccttcgggctcaaagagcacttacaaaaggtaattacattt 41151219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 18116947 - 18117029
Alignment:
Q  267 ttttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||| || |||| | ||||||||||||  |||||||||||  |||||||||||||||||||    
T  18116947 ttttagggtgaggggatggtgccccagtccaaggcagggaagatcttcgacctcaaagagcacctacaaaggtaattacattt 18117029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 38405157 - 38405239
Alignment:
Q  267 ttttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||| || |||| | |||||| ||||||| |||||||||| |||||||| |||||||||||    
T  38405157 ttttagggtgaggggatggtgccccagtccaaggcagggaagaccttcgggttcaaagagcacttacaaagataattacattt 38405239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 371 - 582
Target Start/End: Complemental strand, 39219592 - 39219371
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaa-gtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaa 469  Q
    ||||||||||||||||||| |||||   |||| |||||| |||||| | ||||||||||||||| || ||| |||       || |  ||||||||||||    
T  39219592 ttgtggtattcaatcaagactctttccaatttaaaaaaaagtcttgtgttattcaatcaagactcttaatcacttaaaaaaagtctattggtattcaaaa 39219493  T
Q  470 tcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaaga 559  Q
    |||||||||||| || | ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| |||||| |||| |    
T  39219492 tcattcaaattttga-tgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaaca 39219394  T
Q  560 tgagatttcctgagattgttttt 582  Q
    ||||||||| |  ||||||||||    
T  39219393 tgagatttcttaggattgttttt 39219371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 48117808 - 48117746
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||    
T  48117808 ttgtggtattcaatcaagactctttgtcatttttgaaaagtcttgaggtattcaatcaagact 48117746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 457 - 582
Target Start/End: Complemental strand, 32143046 - 32142911
Alignment:
Q  457 gtggtattcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagta 546  Q
    ||||||||||||||||||||||||| |||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || ||||||||     
T  32143046 gtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 32142947  T
Q  547 tttcatgaaaagatgagatttcctgagattgttttt 582  Q
    || ||| |||| |||||||||| | |||||||||||    
T  32142946 ttccataaaaacatgagatttcttaagattgttttt 32142911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 454 - 510
Target Start/End: Original strand, 447851 - 447907
Alignment:
Q  454 tttgtggtattcaaaatcattcaaatttcgaattattgtttaataaattggattttg 510  Q
    ||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||    
T  447851 tttgtggtatttaaaatcattcaaatttcgaatgattgtttaattaattggattttg 447907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 255 - 349
Target Start/End: Complemental strand, 12472261 - 12472168
Alignment:
Q  255 ggttacacaaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||||| ||| |||||||||||||||| ||||| || |||  | |||||| ||||| |||||||||||| ||||||||||||||| ||||    
T  12472261 ggttacacaaagttt-agggtgaggggatggtaccccagtccaagacagggaagaccttcgtgctcaaagagcacttacaaaggtaattatattt 12472168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 28342290 - 28342352
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  28342290 ttgtggtattcaatcaagattttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 28342352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 45278585 - 45278499
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||| ||| || |||| | ||||||  |||||| | |||||||| |||||||| |||||||||||    
T  45278585 aaaattttagggtgaggggatggtgctccagtccaaggcagggaagacattcgggtttaaagagcacttacaaagataattacattt 45278499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 370 - 433
Target Start/End: Original strand, 8078386 - 8078450
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaa-agtcttgaggtattcaatcaagact 433  Q
    |||||| |||||||||||||||||||||||||| ||||| | ||||| |||||||||||||||||    
T  8078386 tttgtgttattcaatcaagattctttgtcatttaaaaaagaatcttgtggtattcaatcaagact 8078450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 457 - 521
Target Start/End: Original strand, 43679492 - 43679556
Alignment:
Q  457 gtggtattcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgt 521  Q
    |||||||||||||||||||||||||||||  ||||||||||||||  |||||||  |||||||||    
T  43679492 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 43679556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 349
Target Start/End: Complemental strand, 28407639 - 28407555
Alignment:
Q  261 acaaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||||||||||||||||||||||||||||| |||    |   || |||||||||||||||||| ||||||| ||| ||||||||    
T  28407639 acaaaattttagggtgaggggatggtgccccaatccaag----gcttgaccttcgggctcaaagagcacttacaaaagtatttacattt 28407555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 23101241 - 23101303
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  |||| |||||||||||| |||||||||||||||||    
T  23101241 ttgtggtattcaatcaagaatttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 23101303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 370 - 436
Target Start/End: Complemental strand, 28035062 - 28034997
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt 436  Q
    ||||||||||||||| |||||| |||| ||  |||||||||||||| ||||||||||||||||||||    
T  28035062 tttgtggtattcaattaagattttttg-caacttaaaaaagtcttgtggtattcaatcaagactttt 28034997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 29615021 - 29614959
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  |||| |||||||||||| |||||||||||||||||    
T  29615021 ttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 29614959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 34695181 - 34695243
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| |||||||||||||||||    
T  34695181 ttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtggtattcaatcaagact 34695243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 372 - 433
Target Start/End: Original strand, 39784043 - 39784104
Alignment:
Q  372 tgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    |||||||||||||||||| | ||||  |||| |||||||||||| |||||||||||||||||    
T  39784043 tgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 39784104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 371 - 436
Target Start/End: Original strand, 41827257 - 41827322
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt 436  Q
    ||||||||||||||||||| | ||||  | || |||||||||||| ||||||||||||||||||||    
T  41827257 ttgtggtattcaatcaagaatttttgcaacttaaaaaaagtcttgtggtattcaatcaagactttt 41827322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 269 - 349
Target Start/End: Complemental strand, 11216896 - 11216816
Alignment:
Q  269 ttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||| ||| ||||| | || || |||  ||||| |||||||||||||||||| ||||||||||| ||||||||    
T  11216896 ttagggtgagggaatgatgccctagtccaaagtagagaagaccttcgggctcaaagagcacttacaaaggtatttacattt 11216816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 20275520 - 20275460
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    |||||||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  20275520 ttgtggtattcaatcaagattctttccaatttaaaaaaagtcttgggttattcaatcaaga 20275460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 349
Target Start/End: Complemental strand, 23028818 - 23028730
Alignment:
Q  261 acaaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||||||| |||| |||||||| | || ||||||||| |||||  ||||||| ||||| | || ||| ||||||||||||||||    
T  23028818 acaaaattttaggatgagaggatggtgtctcagtctaaggtagggaaggccttcgggttcaaaaaacacttataaaggtaattacattt 23028730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 377 - 440
Target Start/End: Original strand, 10616940 - 10617002
Alignment:
Q  377 tattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatc 440  Q
    |||||||| |||||| ||||||||||| ||||||||||||||||||| ||||||| ||| ||||    
T  10616940 tattcaat-aagattatttgtcatttttaaaaagtcttgaggtattcgatcaagattttccatc 10617002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 43187600 - 43187545
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaat 426  Q
    ||||||||||||||||||| ||||||| |||| |||||||||||  ||||||||||    
T  43187600 ttgtggtattcaatcaagactctttgtaatttaaaaaaagtcttatggtattcaat 43187545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 510
Target Start/End: Complemental strand, 1470447 - 1470309
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||| |||| | |||||||||| |||||||||||| | ||||||||  | ||||||||||  ||       || ||||||||||||||||    
T  1470447 ttgtgctattcaattaagactatttgtcatttaaaaaaagtcttgtgatattcaatataaacttttcatc-atttaaaaaagtattgtggtattcaaaat 1470349  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttg 510  Q
    | |||||||||  ||  |||||||||| |||| |||||||    
T  1470348 cgttcaaattttaaagcattgtttaatgaattagattttg 1470309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 12963644 - 12963706
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    |||||||| |||||||||| ||||||  | || |||||||||||| |||||||||||||||||    
T  12963644 ttgtggtactcaatcaagactctttgcaacttaaaaaaagtcttgtggtattcaatcaagact 12963706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 17001280 - 17001218
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  | || |||||||||||| |||||||||||||||||    
T  17001280 ttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 17001218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 429
Target Start/End: Complemental strand, 18914992 - 18914934
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaa 429  Q
    ||||||||||||||||||| |||||   ||||||||||||||||| | |||||||||||    
T  18914992 ttgtggtattcaatcaagactctttccaattttaaaaaagtcttgtgttattcaatcaa 18914934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 19251482 - 19251544
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    |||| |||||||||||||| ||||||  | || |||||||||||| |||||||||||||||||    
T  19251482 ttgtagtattcaatcaagactctttgcaacttaaaaaaagtcttgtggtattcaatcaagact 19251544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 37327870 - 37327932
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  | || |||||||||||| |||||||||||||||||    
T  37327870 ttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 37327932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 48117850 - 48117788
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  | || |||||||||||| |||||||||||||||||    
T  48117850 ttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 48117788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 457 - 582
Target Start/End: Original strand, 7113530 - 7113665
Alignment:
Q  457 gtggtattcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagta 546  Q
    |||||||||||||| |||||||||||| |  ||||||||||||||          | |||||||||||||||| |||   ||||||| || ||||||||     
T  7113530 gtggtattcaaaataattcaaatttcgcaggattgtttaataaatcagattttgatagattttgtgggattttctaggaaaattttagcatgaaaaagtc 7113629  T
Q  547 tttcatgaaaagatgagatttcctgagattgttttt 582  Q
    ||||||||||| |||| ||||| |  ||||||||||    
T  7113630 tttcatgaaaacatgaaatttcttaggattgttttt 7113665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Original strand, 12893358 - 12893418
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  12893358 ttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 12893418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Original strand, 30440746 - 30440806
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  30440746 ttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 30440806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Original strand, 34695223 - 34695283
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  34695223 ttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 34695283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 400 - 436
Target Start/End: Original strand, 40097140 - 40097176
Alignment:
Q  400 ttttaaaaaagtcttgaggtattcaatcaagactttt 436  Q
    ||||||||||||||| |||||||||||||||||||||    
T  40097140 ttttaaaaaagtctttaggtattcaatcaagactttt 40097176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 43581347 - 43581287
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  43581347 ttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 43581287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #98
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 44343653 - 44343593
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  44343653 ttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 44343593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #99
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Original strand, 47879118 - 47879178
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||| | |||||   ||||||||||||||||| | |||||||||||||    
T  47879118 ttgtggtattcaatcaatactcttttcaattttaaaaaagtcttgtgttattcaatcaaga 47879178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #100
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Original strand, 47914216 - 47914276
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||| | |||||   ||||||||||||||||| | |||||||||||||    
T  47914216 ttgtggtattcaatcaatactcttttcaattttaaaaaagtcttgtgttattcaatcaaga 47914276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #101
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 433
Target Start/End: Complemental strand, 9882490 - 9882431
Alignment:
Q  374 tggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    |||||||||||||||| | ||||  |||| |||||||| ||| |||||||||||||||||    
T  9882490 tggtattcaatcaagactttttgcaatttaaaaaaagttttgtggtattcaatcaagact 9882431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #102
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 553 - 592
Target Start/End: Original strand, 32883944 - 32883983
Alignment:
Q  553 gaaaagatgagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  32883944 gaaaagatgagatttattgagattgtttttcttttaaaag 32883983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #103
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 7993085 - 7993147
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  | || |||||||||| | |||||||||||||||||    
T  7993085 ttgtggtattcaatcaagactttttgcaacttaaaaaaagtctcgtggtattcaatcaagact 7993147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #104
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 10068409 - 10068471
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||| ||||||||||| | ||||||  |||| |||||||||||| |||||| ||||||||||    
T  10068409 ttgtgatattcaatcaaaactctttgcaatttaaaaaaagtcttgtggtatttaatcaagact 10068471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #105
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 39028040 - 39028102
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  | || |||||| ||||| |||||||||||||||||    
T  39028040 ttgtggtattcaatcaagactttttgcaacttaaaaaaaatcttgtggtattcaatcaagact 39028102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #106
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 425
Target Start/End: Original strand, 10068491 - 10068548
Alignment:
Q  368 tctttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaa 425  Q
    |||||| ||||||||||||||||| ||  ||| || |||||||||||| |||||||||    
T  10068491 tctttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaa 10068548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #107
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 429
Target Start/End: Original strand, 31638826 - 31638883
Alignment:
Q  372 tgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaa 429  Q
    |||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||    
T  31638826 tgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaa 31638883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #108
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 431
Target Start/End: Original strand, 34008965 - 34009022
Alignment:
Q  374 tggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    |||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  34008965 tggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaga 34009022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #109
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 433
Target Start/End: Complemental strand, 46405687 - 46405626
Alignment:
Q  372 tgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    |||||||||||||||||| | ||||  | || |||||| ||||| |||||||||||||||||    
T  46405687 tgtggtattcaatcaagactttttgcaacttaaaaaaaatcttgcggtattcaatcaagact 46405626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #110
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 371 - 431
Target Start/End: Original strand, 973134 - 973194
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||| ||| | |||||||||||||    
T  973134 ttgtggtattcaatcaagactctttccaatttaaaaaaagttttgtgttattcaatcaaga 973194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #111
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 404 - 436
Target Start/End: Original strand, 3022902 - 3022934
Alignment:
Q  404 aaaaaagtcttgaggtattcaatcaagactttt 436  Q
    |||||||||||| ||||||||||||||||||||    
T  3022902 aaaaaagtcttgtggtattcaatcaagactttt 3022934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #112
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 400 - 436
Target Start/End: Complemental strand, 39301283 - 39301247
Alignment:
Q  400 ttttaaaaaagtcttgaggtattcaatcaagactttt 436  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  39301283 ttttaaaaaagtctttaggtatttaatcaagactttt 39301247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #113
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 40996906 - 40996846
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||||| | | |||||||||||||    
T  40996906 ttgtggtattcaatcaagactctttccaatttaaaaaaagtctcgtgttattcaatcaaga 40996846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #114
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 372 - 436
Target Start/End: Complemental strand, 44257022 - 44256958
Alignment:
Q  372 tgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt 436  Q
    |||||||||||||||||| | ||||  |  ||||||||||||||  ||||| |||||||||||||    
T  44257022 tgtggtattcaatcaagactttttgcaaccttaaaaaagtcttgtagtatttaatcaagactttt 44256958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 153; Significance: 9e-81; HSPs: 126)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 23987204 - 23987425
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||| |||       || ||||||||||||||||    
T  23987204 ttgtggtattcaatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtggtattcaaaat 23987303  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
    |||||||||||||||  ||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |    
T  23987304 cattcaaatttcgaaggattgtttaataaattagattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 23987403  T
Q  571 gagattgtttttcttttaaaag 592  Q
    ||||||||||||||||||||||    
T  23987404 gagattgtttttcttttaaaag 23987425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 371 - 592
Target Start/End: Complemental strand, 30967515 - 30967294
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||| |||       || ||||||||||||||||    
T  30967515 ttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaat 30967416  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
    |||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| || ||||||| |    
T  30967415 cattcaaatttcaaaggattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaaaataagatttctt 30967316  T
Q  571 gagattgtttttcttttaaaag 592  Q
    |||||||||||| |||||||||    
T  30967315 gagattgttttttttttaaaag 30967294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 376 - 592
Target Start/End: Complemental strand, 49501722 - 49501504
Alignment:
Q  376 gtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcattc 475  Q
    |||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||| |||       || |||||| ||||||||||||||    
T  49501722 gtattcaatcaagactctttgtcattttaaataaatcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaatcattc 49501623  T
Q  476 aaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttc--atgaaaagatgagatttcctgag 573  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||  || ||||||||||||||| ||||    
T  49501622 aaatttcgaatgattgtttaataaattggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatataaaaagatgagatttcttgag 49501523  T
Q  574 attgtttttcttttaaaag 592  Q
    |||||||||||||||||||    
T  49501522 attgtttttcttttaaaag 49501504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 376 - 592
Target Start/End: Complemental strand, 49507787 - 49507569
Alignment:
Q  376 gtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcattc 475  Q
    |||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||| |||       || |||||| ||||||||||||||    
T  49507787 gtattcaatcaagactctttgtcattttaaataaatcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaatcattc 49507688  T
Q  476 aaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttc--atgaaaagatgagatttcctgag 573  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||  || ||||||||||||||| ||||    
T  49507687 aaatttcgaatgattgtttaataaattggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatataaaaagatgagatttcttgag 49507588  T
Q  574 attgtttttcttttaaaag 592  Q
    |||||||||||||||||||    
T  49507587 attgtttttcttttaaaag 49507569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 370 - 592
Target Start/End: Original strand, 51320910 - 51321142
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaa 469  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||       || |||||||||||||||    
T  51320910 tttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaa 51321009  T
Q  470 tcattcaaatttcgaattattgtttaataaattggattttgtgggattttg----------tagtgtaattttaacaagaaaaagtatttcatgaaaaga 559  Q
    ||||||||||||||||  |||||||||||||||||||||||  ||||||||          ||||||||||||||||||||||||| |||||||||||||    
T  51321010 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgtaattttatagtgtaattttaacaagaaaaagtttttcatgaaaaga 51321109  T
Q  560 tgagatttcctgagattgtttttcttttaaaag 592  Q
    ||||||||| |||||||||||||||||||||||    
T  51321110 tgagatttcttgagattgtttttcttttaaaag 51321142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 5441394 - 5441625
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||       || ||||||||||||||||    
T  5441394 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 5441493  T
Q  471 cattcaaatttcgaattattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  5441494 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 5441593  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||| ||||||||||||| |||||||||    
T  5441594 gagatttcttgagattgtttttattttaaaag 5441625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 27768046 - 27768277
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||       || ||||||||||||||||    
T  27768046 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 27768145  T
Q  471 cattcaaatttcgaattattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  27768146 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 27768245  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||| ||||||||||||| |||||||||    
T  27768246 gagatttcttgagattgtttttattttaaaag 27768277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 374 - 592
Target Start/End: Original strand, 54341137 - 54341365
Alignment:
Q  374 tggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcat 473  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||       || |||||||||||||||||||    
T  54341137 tggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcat 54341236  T
Q  474 tcaaatttcgaattattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgag 563  Q
    ||||||||||||  ||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  54341237 tcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 54341336  T
Q  564 atttcctgagattgtttttcttttaaaag 592  Q
    ||||| ||||||||||||| |||||||||    
T  54341337 atttcttgagattgtttttattttaaaag 54341365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 371 - 592
Target Start/End: Complemental strand, 54853684 - 54853453
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||| |||       || ||||||||||||||||    
T  54853684 ttgtggtattcaatcaagactctttttcattttaaaaaagtcttgaagtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaat 54853585  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
     ||||||||||| ||  ||||||||||||||          |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  54853584 tattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagat 54853485  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||| |||||||||||||||||||||||    
T  54853484 gagatttcttgagattgtttttcttttaaaag 54853453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 371 - 591
Target Start/End: Complemental strand, 37828618 - 37828388
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||  ||       || ||||||||||||||||    
T  37828618 ttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaat 37828519  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  |||||||||||||||||||||||          |||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  37828518 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaaaaagaaaaagtctttcatgaaaagat 37828419  T
Q  561 gagatttcctgagattgtttttcttttaaaa 591  Q
    |||||||| ||||||||||||| ||||||||    
T  37828418 gagatttcttgagattgtttttattttaaaa 37828388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 37915817 - 37916048
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||| |||       || ||||||||||||||||    
T  37915817 ttgtggtattcaatcaagactctctatcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaat 37915916  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||    
T  37915917 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtacttttaacaagaaaaagtcattcatgaaaagat 37916016  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
     ||||||  |||||||||||||||||||||||    
T  37916017 aagatttattgagattgtttttcttttaaaag 37916048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 371 - 592
Target Start/End: Complemental strand, 32684203 - 32683993
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||       || ||||||||||||||||    
T  32684203 ttgtggtattcaattaagattctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatca-tttaaaaaagtcttgtggtattcaaaat 32684105  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
    |||||||||||||||  ||||||||||||||||||||||||          |||||||||||||||||||||||| |||||||||||||||||||||  |    
T  32684104 cattcaaatttcgaaggattgtttaataaattggattttgt----------agtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttatt 32684015  T
Q  571 gagattgtttttcttttaaaag 592  Q
    ||||||||||||||||||||||    
T  32684014 gagattgtttttcttttaaaag 32683993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 372 - 589
Target Start/End: Original strand, 32322082 - 32322309
Alignment:
Q  372 tgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatc 471  Q
    |||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||       || |||||||||||||||||    
T  32322082 tgtgatatttaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaatagtcttgtggtattcaaaatc 32322181  T
Q  472 attcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatg 561  Q
    ||||||||||||||  ||||||||||||||          ||||||||||||||||||||||||||||||||| ||||||| || |||||| ||||||||    
T  32322182 attcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaaatgtctttcataaaaagatg 32322281  T
Q  562 agatttcctgagattgtttttcttttaa 589  Q
    ||||||| ||||||||||||||||||||    
T  32322282 agatttcttgagattgtttttcttttaa 32322309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 371 - 592
Target Start/End: Complemental strand, 49835029 - 49834818
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||       || ||||||||||||||||    
T  49835029 ttgtggtattcaatcaagactctttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaat 49834930  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
    |||||||||||||||  |||||||||||||||          |||||||||||||||||||||||||||| |||| |||||| ||||||||||||||| |    
T  49834929 cattcaaatttcgaaggattgtttaataaatt----------ggattttgtagtgtaattttaacaagaagaagtctttcattaaaagatgagatttctt 49834840  T
Q  571 gagattgtttttcttttaaaag 592  Q
    |||||||||||||| |||||||    
T  49834839 gagattgtttttctattaaaag 49834818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 12913214 - 12913435
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||  ||||||||  ||       || |  |||||||||||||    
T  12913214 ttgtggtatttaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagctttttcatcatttaaaaaaagtctcatggtattcaaaat 12913313  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
    ||||||||||| |||  |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| | |||||||||| |    
T  12913314 cattcaaattttgaaggattgtttaataaattggattttgtgggattttctagtgaaattttaacaagaaaaagtatttcatgaagacatgagatttctt 12913413  T
Q  571 gagattgtttttcttttaaaag 592  Q
    |  ||| |||||||||||||||    
T  12913414 ggaattatttttcttttaaaag 12913435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 370 - 592
Target Start/End: Original strand, 5799966 - 5800189
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnn-gttttgtggtattcaaa 468  Q
    |||||||||||||||||||| |||||||||||||||||||   |||| |||||  ||||| |||||||||| |||        || ||||||||||||||    
T  5799966 tttgtggtattcaatcaagactctttgtcattttaaaaaaaatttgatgtatttcatcaaaacttttcatcacttaaaaaaaagtcttgtggtattcaaa 5800065  T
Q  469 atcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttc 568  Q
    |||||||||||||| ||  ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||| |||||||||| ||||||     
T  5800066 atcattcaaatttcaaaggattgtttaataaattggattttgtgagattttgtagagtaattttaacaagaaaaagtctttaatgaaaagataagatttt 5800165  T
Q  569 ctgagattgtttttcttttaaaag 592  Q
     |||||||||||||||||||||||    
T  5800166 ttgagattgtttttcttttaaaag 5800189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 374 - 579
Target Start/End: Original strand, 50018244 - 50018449
Alignment:
Q  374 tggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcat 473  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||  ||       || ||||||||||||| |||||    
T  50018244 tggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattccatcaagacttttcttcatttaaaaaaagtcttgtggtattcaagatcat 50018343  T
Q  474 tcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcctgag 573  Q
    |||||||| |||  |||||||||||||||| |||||   ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||  ||||    
T  50018344 tcaaattttgaaggattgtttaataaattgaattttaatggattttgtagtgtaattttaacaagaaaaagtctttcaagaaaagatgagatttattgag 50018443  T
Q  574 attgtt 579  Q
    ||||||    
T  50018444 attgtt 50018449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 405 - 591
Target Start/End: Original strand, 28483923 - 28484108
Alignment:
Q  405 aaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcattcaaatttcgaattattgtttaataaattgg 504  Q
    |||||||||||||||||||||||||||||||||||| |||       || | |||||||||||||||||||||||||||||  ||| |||||||||||||    
T  28483923 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattatttaataaattgg 28484022  T
Q  505 attttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcctgagattgtttttcttttaaaa 591  Q
    ||||||| |||||||||||||||| |||||||||||||||| ||||||||||||| |||||||| | ||||| ||||||||||||||    
T  28484023 attttgtaggattttgtagtgtaa-tttaacaagaaaaagtctttcatgaaaagacgagatttcttaagattatttttcttttaaaa 28484108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 371 - 591
Target Start/End: Complemental strand, 36479447 - 36479228
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||| |||||||| |||       || | ||||||||||||||    
T  36479447 ttgtggtattcaatcaaaactctttgtcattttaaaaaagtcttgaggtattcaattaagatttttcatcacttaaaaaaagtctcgtggtattcaaaat 36479348  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
     ||||||||||||||  ||| |||||||||||||||||||  ||||||| ||||| ||||||| ||| ||||||| ||| ||||||| |||||||||| |    
T  36479347 tattcaaatttcgaaggattatttaataaattggattttgatggatttt-tagtgaaattttagcaaaaaaaagtcttttatgaaaacatgagatttctt 36479249  T
Q  571 gagattgtttttcttttaaaa 591  Q
    |||||| ||||||||||||||    
T  36479248 gagattatttttcttttaaaa 36479228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 377 - 582
Target Start/End: Complemental strand, 46635852 - 46635643
Alignment:
Q  377 tattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcattca 476  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||| |||       |||| || |||||||||||||||||    
T  46635852 tattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtttagtagtattcaaaatcattca 46635753  T
Q  477 aatttcgaattattgtttaataaat----tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcctga 572  Q
    |||||||||  ||||||||||||||    | |||||||||||||||| ||||| ||||||| || |||||||| |||||| |||| |||||||||| |      
T  46635752 aatttcgaaggattgtttaataaataagattgattttgtgggattttttagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttag 46635653  T
Q  573 gattgttttt 582  Q
    ||||||||||    
T  46635652 gattgttttt 46635643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 458 - 586
Target Start/End: Complemental strand, 56445474 - 56445346
Alignment:
Q  458 tggtattcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaa 557  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| || |||| ||||||||||| |||||| || |    
T  56445474 tggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgtgggattttctagtgaaactttagcaagaaaaagtctttcataaaga 56445375  T
Q  558 gatgagatttcctgagattgtttttcttt 586  Q
     |||||||||| |||||||||||||||||    
T  56445374 catgagatttcttgagattgtttttcttt 56445346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 371 - 582
Target Start/End: Complemental strand, 41881299 - 41881077
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgctt-nnnnnnngttttgtggtattcaaaa 469  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||| |||        |||| |||||||||||||    
T  41881299 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtttagtggtattcaaaa 41881200  T
Q  470 tcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaaga 559  Q
    ||||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| |    
T  41881199 tcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaaca 41881100  T
Q  560 tgagatttcctgagattgttttt 582  Q
    ||||||||| |  ||||||||||    
T  41881099 tgagatttcttaggattgttttt 41881077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 391 - 521
Target Start/End: Complemental strand, 29649863 - 29649733
Alignment:
Q  391 tctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcattcaaatttcgaattatt 490  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||       || |||||||||||||||||||||||||||||||  |||    
T  29649863 tctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagatt 29649764  T
Q  491 gtttaataaattggattttgtgggattttgt 521  Q
    ||||||||||||||||||||  |||||||||    
T  29649763 gtttaataaattggattttgatggattttgt 29649733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 371 - 582
Target Start/End: Complemental strand, 31314944 - 31314737
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||| ||||||||||||||||||||| |||||||||||| |||||||||    |||| || ||| |||       || | ||||||||||||||    
T  31314944 ttgtgttatttaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa----gactcttaatcacttaaaaaaagtctagtggtattcaaaat 31314849  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
    |||||||||||||||  ||||||||||||||  |||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| |||||||||| |    
T  31314848 cattcaaatttcgaaggattgtttaataaatcagattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 31314749  T
Q  571 gagattgttttt 582  Q
      ||||||||||    
T  31314748 aggattgttttt 31314737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 371 - 568
Target Start/End: Original strand, 41725115 - 41725319
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||| | |||||||||||||||||||||||||| |||| |||||||||||||||||| | |       || ||||| ||||||||||    
T  41725115 ttgtggtattcaatcaatactctttgtcattttaaaaaagtcttgatgtatgcaatcaagacttttcatcacctaaaaaaagtcttgtgatattcaaaat 41725214  T
Q  471 cattcaaatttcgaattattgtttaa--taaat-----tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgag 563  Q
    ||||||||||| |||  |||||||||  |  ||     || ||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||    
T  41725215 cattcaaattttgaaggattgtttaaattggattttgatgaattttgtgggattttatagtgtaattttaacaagaaaaaatctttcatgaaaagatgag 41725314  T
Q  564 atttc 568  Q
    |||||    
T  41725315 atttc 41725319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 377 - 582
Target Start/End: Original strand, 1112889 - 1113104
Alignment:
Q  377 tattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcattca 476  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||| |||       || | ||||||||||||||||||||    
T  1112889 tattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattca 1112988  T
Q  477 aatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatt 566  Q
    |||||| ||| ||||||||||||||          |||||||||||||||||  ||||  |||||||||| |||||||| ||||||||||| ||||||||    
T  1112989 aatttcaaatgattgtttaataaatcagattttgatggattttgtgggatttcctagtaaaattttaacatgaaaaagtctttcatgaaaacatgagatt 1113088  T
Q  567 tcctgagattgttttt 582  Q
    || |  ||||||||||    
T  1113089 tcttaggattgttttt 1113104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 379 - 579
Target Start/End: Original strand, 55302841 - 55303051
Alignment:
Q  379 ttcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcattcaaa 478  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||||| || ||| |||       || | ||||||||||||||||||||||    
T  55302841 ttcaatcaagattctttgtcattttaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaa 55302940  T
Q  479 tttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttc 568  Q
    |||||||  ||||||||||||||          ||||| |||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||||||||||    
T  55302941 tttcgaaggattgtttaataaatcagattttgatggatattgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 55303040  T
Q  569 ctgagattgtt 579  Q
     | ||||||||    
T  55303041 ttaagattgtt 55303051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 371 - 582
Target Start/End: Original strand, 12112935 - 12113156
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||| || ||| |||       || |  |||||||||||||    
T  12112935 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaagtctaatggtattcaaaat 12113034  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          |||||||||||| ||||| ||||| ||||||| || |||||||| ||||||||||| ||    
T  12113035 cattcaaatttcgaaggattgtttaataaatcagattttaatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 12113134  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| || ||||||||||    
T  12113135 gagatttcttgggattgttttt 12113156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 371 - 582
Target Start/End: Original strand, 25331121 - 25331342
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||| |||       || | ||| ||||||||||    
T  25331121 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaat 25331220  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||| ||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||    
T  25331221 cattcaaatttcaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 25331320  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| |  ||||||||||    
T  25331321 gagatttcttaggattgttttt 25331342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 455 - 592
Target Start/End: Original strand, 48261201 - 48261348
Alignment:
Q  455 ttgtggtattcaaaatcattcaaatttcgaattattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaag 544  Q
    ||||||||||||||||||||||||||| |||  ||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||     
T  48261201 ttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaa 48261300  T
Q  545 tatttcatgaaaagatgagatttcctgagattgtttttcttttaaaag 592  Q
    | ||||||||||| |||||||||| ||||||||||||| |||||||||    
T  48261301 tctttcatgaaaatatgagatttcttgagattgtttttattttaaaag 48261348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 371 - 568
Target Start/End: Complemental strand, 40537361 - 40537169
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| ||||||||||||| |||||||||||| |||||||||||| ||||||||||||| ||| || ||| |||           |||||||||||||||    
T  40537361 ttgtgttattcaatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaa-----tgtggtattcaaaat 40537267  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttc 568  Q
    |||| ||||||||||| ||||||||||||||  |||||||  ||||||||| ||| ||||||| || |||||||| ||||||||||| ||||||||||    
T  40537266 catttaaatttcgaatgattgtttaataaatctgattttgatggattttgtggtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 40537169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 372 - 582
Target Start/End: Complemental strand, 34228798 - 34228578
Alignment:
Q  372 tgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatc 471  Q
    |||| |||||||||||||||||||||||||| ||||||||| || ||||||||||||| | | || ||| |||       || | |||||||||||||||    
T  34228798 tgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaaaattcttaatcacttaaaaaaagtctagtggtattcaaaatc 34228699  T
Q  472 attcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatg 561  Q
    ||| ||||||||||| ||||||||||||||          |||||||||| ||||||| ||||| ||||||| || |||||||| ||||||||||| |||    
T  34228698 attgaaatttcgaatgattgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatg 34228599  T
Q  562 agatttcctgagattgttttt 582  Q
    ||||||| | |||||||||||    
T  34228598 agatttcttaagattgttttt 34228578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 371 - 568
Target Start/End: Original strand, 22202005 - 22202212
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||| |||       || | ||||||||||||||    
T  22202005 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 22202104  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||| ||||||| ||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||    
T  22202105 cattaaaatttcaaaagattgtttaataaataaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 22202204  T
Q  561 gagatttc 568  Q
     |||||||    
T  22202205 tagatttc 22202212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 371 - 582
Target Start/End: Original strand, 7007364 - 7007585
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| ||||||||||||||||| |||||||| ||||||||| || ||||||||||||||||| || ||| |||       || | ||||||||||||||    
T  7007364 ttgtgttattcaatcaagattctctgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 7007463  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          || ||||||||||||||| ||||| ||||||| || |||||  | ||||||||||| ||    
T  7007464 cattcaaatttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaatttttttcatgaaaacat 7007563  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| | |||||||||||    
T  7007564 gagatttcttaagattgttttt 7007585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 371 - 521
Target Start/End: Original strand, 9163066 - 9163216
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||| |||||||| | |       || ||||| ||||||||||    
T  9163066 ttgtggtattcaatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagatttttcatcacataaaaaaagtcttgtgatattcaaaat 9163165  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgt 521  Q
    |||||||||||||||  |||||||||||||||  ||||||  |||||||||    
T  9163166 cattcaaatttcgaaggattgtttaataaattaaattttgatggattttgt 9163216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 371 - 521
Target Start/End: Original strand, 28541688 - 28541838
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| |||||||||| | ||||||||||||||||| || ||| |||       || | ||||||||||||||    
T  28541688 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtctcgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 28541787  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgt 521  Q
    |||||||||||||||| ||||||||||||||  |||||||  |||||||||    
T  28541788 cattcaaatttcgaatgattgtttaataaatcagattttgatggattttgt 28541838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 371 - 582
Target Start/End: Complemental strand, 32951052 - 32950831
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| ||||||||||||||| |||||||||| ||||||||| || ||||||||||||||||| || ||| |||       || | ||||||||||||||    
T  32951052 ttgtgttattcaatcaagattatttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 32950953  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          || ||||||||||||||| ||||| ||||||| || |||||| | ||||||||||| ||    
T  32950952 cattcaaatttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacat 32950853  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| | ||||| |||||    
T  32950852 gagatttcttaagatttttttt 32950831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 371 - 582
Target Start/End: Complemental strand, 39479573 - 39479350
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgctt--nnnnnnngttttgtggtattcaaa 468  Q
    ||||| |||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||| || ||| |||         |  ||||||||||||||    
T  39479573 ttgtgttattcaatcaagattccttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaaagacttgtggtattcaaa 39479474  T
Q  469 atcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaag 558  Q
    |||||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||      
T  39479473 atcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaggaaaaagtctttcatgaaagc 39479374  T
Q  559 atgagatttcctgagattgttttt 582  Q
    |||||||||| |  ||||||||||    
T  39479373 atgagatttcttaggattgttttt 39479350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 371 - 592
Target Start/End: Complemental strand, 44771070 - 44770841
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggt-attcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaa 469  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||| |||||||| |||        | |  ||||||||||||    
T  44771070 ttgtgatattcaatcaagactctttgtcattttaaaaaaatcttgaggtaattcaatcaagatttttcatcacttaaaaaaaatctcatggtattcaaaa 44770971  T
Q  470 tcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaaga 559  Q
    |||||||||||| |||  ||||||||||||||          |||||||||||||||||| ||||| |||||||| |||||||||| ||||||||  | |    
T  44770970 tcattcaaattttgaaggattgtttaataaattggattttggtggattttgtgggattttctagtgaaattttaagaagaaaaagtctttcatgacgaca 44770871  T
Q  560 tgagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||||   | |||| ||||||||||||||    
T  44770870 tgagatttc---atattgcttttcttttaaaag 44770841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 371 - 521
Target Start/End: Complemental strand, 19741124 - 19740974
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| ||||||||||||||||||||||||||  |||||||| || |||||||| ||||||||||| ||| |||       || |||||||||| |||||    
T  19741124 ttgtgttattcaatcaagattctttgtcatttataaaaagtcatgtggtattcagtcaagacttttaatcacttaaaaaaagtcttgtggtattaaaaat 19741025  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgt 521  Q
    |||||||||||||||  ||||||||||||||| |||||||  |||||||||    
T  19741024 cattcaaatttcgaaggattgtttaataaattagattttgatggattttgt 19740974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 255 - 349
Target Start/End: Complemental strand, 36192682 - 36192588
Alignment:
Q  255 ggttacacaaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||  ||||||||||||||||||||||||||||| || |||||| |||||| |||||||||||||||||||||||||| ||||||||||||    
T  36192682 ggttacatgaaattttagggtgaggggatggtgccccagtccaaggtagggaagaccttcgggctcaaagagcatttacaaaagtaattacattt 36192588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 371 - 582
Target Start/End: Complemental strand, 30009893 - 30009672
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||| |||||| ||||||| |||||| ||||||||| || ||||||||||||||||| || ||| |||       || | ||||||||||||||    
T  30009893 ttgtgttatttaatcaaaattctttatcatttaaaaaaagtcctgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 30009794  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||| ||||||  ||| ||||||||||||||          |||||||||||||||||| ||||  ||||||| || |||||||| ||||||||||| ||    
T  30009793 catttaaattttaaatgattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaacat 30009694  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| | |||||||||||    
T  30009693 gagatttcttaagattgttttt 30009672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 371 - 568
Target Start/End: Original strand, 1044799 - 1045004
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||| || ||| |||       || | |||||||||||||     
T  1044799 ttgtgttattcaatcaagattccttgtcattt--aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaac 1044896  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    ||||||| |||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||    
T  1044897 cattcaactttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 1044996  T
Q  561 gagatttc 568  Q
     |||||||    
T  1044997 aagatttc 1045004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 261 - 349
Target Start/End: Original strand, 30970381 - 30970469
Alignment:
Q  261 acaaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||| ||||| |||||||||||| ||||||||||| ||||||||    
T  30970381 acaaaattttagggtgaggggatggtgccccagtctaaggtagggaagaccttcgagctcaaagagcacttacaaaggtatttacattt 30970469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 377 - 521
Target Start/End: Original strand, 25446047 - 25446190
Alignment:
Q  377 tattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcattca 476  Q
    ||||||||||||||| |||||||||| |||||| ||||| ||||||||||||||||| || ||| |||       || | ||||||||||||||||||||    
T  25446047 tattcaatcaagatt-tttgtcatttaaaaaaattcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattca 25446145  T
Q  477 aatttcgaattattgtttaataaattggattttgtgggattttgt 521  Q
    |||||||||| ||||||||||||||  |||||||  |||||||||    
T  25446146 aatttcgaatgattgtttaataaatcagattttgatggattttgt 25446190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 370 - 440
Target Start/End: Original strand, 20021333 - 20021403
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatc 440  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  20021333 tttgtggtattcaatcaagattctttgtcattttaaaaaaatcttgaagtattcaatcaagacttttcatc 20021403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 502 - 591
Target Start/End: Original strand, 8711997 - 8712086
Alignment:
Q  502 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcctgagattgtttttcttttaaaa 591  Q
    |||||||||||||||||| ||||| ||||||| ||||||||||| |||||| |||| |||||||||| ||||||||||||||||||||||    
T  8711997 tggattttgtgggattttatagtgaaattttagcaagaaaaagtctttcatcaaaacatgagatttcttgagattgtttttcttttaaaa 8712086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 370 - 568
Target Start/End: Complemental strand, 39307470 - 39307262
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaa 469  Q
    |||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||| | ||||||  ||       || |||||||||||| ||    
T  39307470 tttgtggtattcaatcaagattttttgccattttaaaaaagtcttgtggtattcaatcaagattcttcatcatttaaaaaaagtcttgtggtattcataa 39307371  T
Q  470 tcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaaga 559  Q
    ||||||||||||| ||  ||| |||||| |||          || ||||||||||||||| ||||| |||||||||| |||||||| | | || |||| |    
T  39307370 tcattcaaatttctaaagattatttaatgaattgagttttgatgaattttgtgggattttctagtgaaattttaacatgaaaaagtttctgataaaaaca 39307271  T
Q  560 tgagatttc 568  Q
    |||||||||    
T  39307270 tgagatttc 39307262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 371 - 568
Target Start/End: Original strand, 3436583 - 3436790
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| ||||||||||||||| |||||| ||| |||||| ||||| | ||||||||||||||| || |||  ||        | |  |||||||||||||    
T  3436583 ttgtgttattcaatcaagattttttgtcgtttaaaaaaaatcttgtgatattcaatcaagactcttaatcatttaaaaaaaatctaatggtattcaaaat 3436682  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          || ||||||||||||||||||||| |||||||||| |||||||| ||||||||||| ||    
T  3436683 cattcaaatttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttgtagtgaaattttaacatgaaaaagtttttcatgaaaacat 3436782  T
Q  561 gagatttc 568  Q
     |||||||    
T  3436783 aagatttc 3436790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 371 - 582
Target Start/End: Complemental strand, 37046668 - 37046445
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgctt-nnnnnnngttttgtggtattcaaaa 469  Q
    ||||| |||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| || ||| |||        || | ||| |||| ||||    
T  37046668 ttgtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtgatatttaaaa 37046569  T
Q  470 tcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtg-taattttaacaagaaaaagtatttcatgaaaag 558  Q
    ||||||||||||||||  ||||||||||||||          |||||||||||| ||||| |||||  ||||||| || |||||||| |||||||||||     
T  37046568 tcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaaattttagcatgaaaaagtctttcatgaaaat 37046469  T
Q  559 atgagatttcctgagattgttttt 582  Q
    |||||||||| |  ||||||||||    
T  37046468 atgagatttcttaggattgttttt 37046445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 371 - 510
Target Start/End: Original strand, 28370914 - 28371053
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||| | |||||||| |||||||||||||||||| ||||||||||| |||||| ||| |||       || |  |||||||||||||    
T  28370914 ttgtggtattcaatcaaaactctttgtcgttttaaaaaagtcttgagatattcaatcaaaactttttatcacttaaataaagtctcatggtattcaaaat 28371013  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttg 510  Q
    |||||||||||  ||  |||||||||||||||| ||||||    
T  28371014 cattcaaattttaaaggattgtttaataaattgaattttg 28371053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 46494401 - 46494483
Alignment:
Q  267 ttttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||| || |||||| |||||| |||||||||||||||||| ||||||||||| ||||||||    
T  46494401 ttttagggtgaggggatggtgccccagtccaaggtagggaagaccttcgggctcaaagagcacttacaaaggtatttacattt 46494483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 261 - 340
Target Start/End: Original strand, 22304088 - 22304167
Alignment:
Q  261 acaaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggta 340  Q
    |||||||||||||||||| ||||||||||||| || |||||| |||||| |||||||||||||||||| |||||||||||    
T  22304088 acaaaattttagggtgagaggatggtgccccagtccaaggtagggaagaccttcgggctcaaagagcacttacaaaggta 22304167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 29576548 - 29576462
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||||||||||||| ||||||||||||| |||| | |||||| |||||||||||||||||| |||||||| || ||||||||    
T  29576548 aaaattttagggtgagggggtggtgccccaatccaaggcagggaagaccttcgggctcaaagagcacttacaaagttatttacattt 29576462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 51066622 - 51066540
Alignment:
Q  267 ttttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||| || |||| | |||||| |||||||||||||||||| ||||||||||||||| ||||    
T  51066622 ttttagggtgaggggatggtgccccagtccaaggcagggaagaccttcgggctcaaagagcacttacaaaggtaattatattt 51066540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 261 - 349
Target Start/End: Original strand, 7173582 - 7173670
Alignment:
Q  261 acaaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||||||||| || || | | |||||| |||||||||||||||||| ||||||||||| | ||||||    
T  7173582 acaaaattttagggtgaggggatggtgccccagtccaacgcagggaagaccttcgggctcaaagagcacttacaaaggtattgacattt 7173670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 502 - 586
Target Start/End: Original strand, 24736466 - 24736550
Alignment:
Q  502 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcctgagattgtttttcttt 586  Q
    ||||||||||| |||||| ||||| |||||||||||||| |||| ||||||||||| |||||||||| || ||||||||||||||    
T  24736466 tggattttgtgagattttctagtgaaattttaacaagaagaagtctttcatgaaaacatgagatttcttgtgattgtttttcttt 24736550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 405 - 582
Target Start/End: Original strand, 42786708 - 42786895
Alignment:
Q  405 aaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcattcaaatttcgaattattgtttaataaat--- 501  Q
    ||||||||||| ||||||||||||||||| || |||  ||       || | |||||||||||||||||||||||||||||  ||||||||||||||       
T  42786708 aaaaagtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcat 42786807  T
Q  502 -------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcctgagattgttttt 582  Q
           |||||||||||| ||||| ||||| ||||||| ||  ||||||| ||||||||||| |||||||||| |  ||||||||||    
T  42786808 attttgatggattttgtggaattttctagtgaaattttatcataaaaaagtctttcatgaaaacatgagatttcttatgattgttttt 42786895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 24131188 - 24131126
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  24131188 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagact 24131126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 11090339 - 11090412
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgctt 444  Q
    ||||||||||||||||||| |||||| || || |||||||| ||| ||||||||||||||||||||||||||||    
T  11090339 ttgtggtattcaatcaagaatctttgccacttaaaaaaagttttgtggtattcaatcaagacttttcatcgctt 11090412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 371 - 521
Target Start/End: Complemental strand, 25504855 - 25504705
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| ||||||||||||||||||  |||||| |||||| ||||| | ||||||||||||||| || ||| |||       ||   ||| ||||||||||    
T  25504855 ttgtgttattcaatcaagattcttgatcatttaaaaaaattcttgtgatattcaatcaagactcttaatcacttaaaaaaagtccagtgatattcaaaat 25504756  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgt 521  Q
    |||||||||||||||  ||||||||||||||  |||||||  |||||||||    
T  25504755 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 25504705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 371 - 521
Target Start/End: Original strand, 53275829 - 53275979
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||| |||||| |||||||||| ||||||||||||  |||||||||||||| |||| ||| |||       || | ||| |||| |||||    
T  53275829 ttgtgttattcaataaagattatttgtcatttaaaaaaagtcttgtagtattcaatcaagatttttaatcacttaaaaaaagtctagtgatatttaaaat 53275928  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgt 521  Q
    |||||||||||||||  ||||| ||||||||  |||||||  |||||||||    
T  53275929 cattcaaatttcgaaggattgtgtaataaatcagattttgatggattttgt 53275979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 261 - 349
Target Start/End: Original strand, 39863775 - 39863863
Alignment:
Q  261 acaaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||||||||||||||||| ||| | || || ||||||  ||||| ||||||| |||||||||| ||||||||||||||||||||    
T  39863775 acaaaattttagggtgaggggatagtgtctcagtccaaggtagagaagaccttcgggttcaaagagcacttacaaaggtaattacattt 39863863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 377 - 501
Target Start/End: Original strand, 23464951 - 23465075
Alignment:
Q  377 tattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcattca 476  Q
    |||||||||||||||| ||||||||| |||||||| |||   ||||||||||||||| || ||| |||       || | ||||||||||||| ||||||    
T  23464951 tattcaatcaagattccttgtcatttaaaaaaagttttgtaatattcaatcaagactcttaatcacttaaaataagtctagtggtattcaaaaccattca 23465050  T
Q  477 aatttcgaattattgtttaataaat 501  Q
    |||||||||  ||||||||||||||    
T  23465051 aatttcgaaggattgtttaataaat 23465075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 457 - 589
Target Start/End: Original strand, 41320886 - 41321030
Alignment:
Q  457 gtggtattcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagta 546  Q
    |||||||||||||||||||||||||||||  ||||||||||||||          ||||||||||||||| || ||||| |||||||  | ||||||||     
T  41320886 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatgttctagtgaaattttagtatgaaaaagtc 41320985  T
Q  547 tttcatgaaaagatgagatttcctgagattg--tttttcttttaa 589  Q
    |||||| |||| |||||||||| | ||||||  ||||||||||||    
T  41320986 tttcataaaaacatgagatttcttaagattgattttttcttttaa 41321030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 393 - 568
Target Start/End: Complemental strand, 41581982 - 41581798
Alignment:
Q  393 tttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcattcaaatttcgaattattgt 492  Q
    ||||||||||||||||||||||| |||||||| | |||| ||||| |  |||       || | |||||||| | | |||||||||||| |||| |||||    
T  41581982 tttgtcattttaaaaaagtcttgtggtattcagttaagaattttcttaacttaaaaaaagtctcgtggtatttagagtcattcaaattttgaataattgt 41581883  T
Q  493 ttaataaattggatt--------ttgtgggattttgtagtgtaattttaacaag-aaaaagtatttcatgaaaagatgagatttc 568  Q
    |||||||||||||||        |||||||||||| ||||| |||||||||| | ||||| ||||||||| ||| ||||||||||    
T  41581882 ttaataaattggattgatatattttgtgggattttctagtgaaattttaacatgaaaaaaatatttcatgtaaacatgagatttc 41581798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 263 - 349
Target Start/End: Original strand, 51713964 - 51714050
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||||||| |  || | | |||||| |||||||||||||||||| ||||||||||| ||| ||||    
T  51713964 aaaattttagggtgaggggatggtgccccagttcaaagcagggaagaccttcgggctcaaagagcacttacaaaggtatttatattt 51714050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 55231820 - 55231734
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||||||| || |||| | ||||||  ||| ||||||||||||| ||||||| ||| ||||||||    
T  55231820 aaaattttagggtgaggggatggtgccccagtccaaggcagggaagacattcaggctcaaagagcacttacaaaagtatttacattt 55231734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 263 - 332
Target Start/End: Complemental strand, 2570334 - 2570265
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcattta 332  Q
    |||||||||||||||||||||||||||||| || |||| | ||||||||||||| |||||||| ||||||    
T  2570334 aaaattttagggtgaggggatggtgccccagtccaaggcagggaagatcttcggactcaaagaacattta 2570265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 495 - 587
Target Start/End: Original strand, 11090428 - 11090520
Alignment:
Q  495 aataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcctgagattgtttttctttt 587  Q
    ||||||||||||||||||||||||| ||||| ||||||| ||  ||||||| ||| || |||| |||||||||| |  |||||||||||||||    
T  11090428 aataaattggattttgtgggattttttagtgaaattttagcattaaaaagtctttaataaaaacatgagatttcttaggattgtttttctttt 11090520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 27768004 - 27768066
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  27768004 ttgtggtattcaatcaagattttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 27768066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 32139297 - 32139211
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||| |||||||||| |||||||||||||| || |||| |  ||||| |||| |||||||||| || ||||||||||||||||||||    
T  32139297 aaaaatttagggtgaagggatggtgccccagtccaaggcagagaagaccttcaggctcaaagaacacttacaaaggtaattacattt 32139211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 37915775 - 37915837
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||||| || |||||||||||| |||||||||||||||||    
T  37915775 ttgtggtattcaatcaagactttttgtcacttaaaaaaagtcttgtggtattcaatcaagact 37915837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 266 - 348
Target Start/End: Original strand, 51279035 - 51279117
Alignment:
Q  266 attttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacatt 348  Q
    ||||||||||||||||||||||||  |||| |||||  |||||| ||| |||||||||||||| ||||||| ||| |||||||    
T  51279035 attttagggtgaggggatggtgccttaatccaaggttgggaagacctttgggctcaaagagcacttacaaaagtatttacatt 51279117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 371 - 436
Target Start/End: Original strand, 37915733 - 37915798
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt 436  Q
    ||||||||||||||||||| | ||||| | || |||||||||||| ||||||||||||||||||||    
T  37915733 ttgtggtattcaatcaagactttttgtaacttaaaaaaagtcttgtggtattcaatcaagactttt 37915798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 457 - 521
Target Start/End: Complemental strand, 7249895 - 7249831
Alignment:
Q  457 gtggtattcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgt 521  Q
    |||||||||||||||||||||||||||||  ||||||||||||||  |||||||  |||||||||    
T  7249895 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 7249831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 503 - 590
Target Start/End: Complemental strand, 36728023 - 36727937
Alignment:
Q  503 ggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcctgagattgtttttcttttaaa 590  Q
    ||||||||| ||||||| ||||| ||||||||||||||||| | ||||||| | | |||||||||  ||||||||||||| |||||||    
T  36728023 ggattttgtaggattttttagtgaaattttaacaagaaaaaatctttcatg-agacatgagattttttgagattgttttttttttaaa 36727937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 5441352 - 5441414
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  |||| |||||||||||| |||||||||||||||||    
T  5441352 ttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 5441414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 30967557 - 30967495
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  |||| |||||||||||| |||||||||||||||||    
T  30967557 ttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 30967495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 41523526 - 41523444
Alignment:
Q  267 ttttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||| ||| ||||||||| ||||||| ||| || |||||| ||||| |||||||||||| ||| ||||||| ||||||||    
T  41523526 ttttaggatgaagggatggtgtcccaatccaagatagggaagaccttcgagctcaaagagcacttataaaggtatttacattt 41523444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 50905881 - 50905795
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||  ||||||||||||| |  |||| | |||||| |||||| |||||||||||  ||||||| |||||||||||    
T  50905881 aaaattttagggtgaaaggatggtgccccagttcaaggcatggaagaccttcggactcaaagagcacctacaaagataattacattt 50905795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 41881341 - 41881281
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   ||||||||||||||||| | |||||||||||||    
T  41881341 ttgtggtattcaatcaagactctttccaattttaaaaaagtcttgtgttattcaatcaaga 41881281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 263 - 346
Target Start/End: Complemental strand, 676861 - 676778
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattaca 346  Q
    ||||||||| ||| |||||||||||   || || |||| | |||||| |||||||||||||||||| ||||||||||| |||||    
T  676861 aaaattttaaggtaaggggatggtgttacagtccaaggcagggaagaccttcgggctcaaagagcacttacaaaggtatttaca 676778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 349
Target Start/End: Original strand, 4080551 - 4080637
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||| || ||||||||||||| |||||| |||  |  |||||  ||| | ||||||||||||||||||| ||||||||||||    
T  4080551 aaaattttaaggcgaggggatggtgctccaatccaagacagagaagacattcagactcaaagagcatttacaaatgtaattacattt 4080637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 7249988 - 7249926
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||| |||||||||||||||||| ||||||| |||||  ||||| ||||||| |||||||||    
T  7249988 ttgtgttattcaatcaagattcttagtcatttaaaaaatatcttgtggtattcgatcaagact 7249926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 326
Target Start/End: Original strand, 37990599 - 37990657
Alignment:
Q  268 tttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagag 326  Q
    |||||| |||||| ||||||||||| || |||||| ||||||||||| |||||||||||    
T  37990599 tttaggatgagggaatggtgccccagtccaaggtagggaagatcttcaggctcaaagag 37990657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 40537403 - 40537341
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    |||||||||||||| |||| ||||| | |||| |||||||||||| | |||||||||||||||    
T  40537403 ttgtggtattcaattaagactctttctaatttaaaaaaagtcttgtgttattcaatcaagact 40537341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 54341092 - 54341154
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  |||| |||||||||||  |||||||||||||||||    
T  54341092 ttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttatggtattcaatcaagact 54341154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 54853726 - 54853664
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  | || |||||||||||| |||||||||||||||||    
T  54853726 ttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 54853664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 8740540 - 8740495
Alignment:
Q  304 ggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||||    
T  8740540 ggaagaccttcgggctcaaagagcacttacaaaggtatttacattt 8740495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Original strand, 1044758 - 1044817
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||  || ||||||||||||||| | |||||||||||||    
T  1044758 ttgtggtattcaatcaagactctttc-caatttaaaaaagtcttgtgttattcaatcaaga 1044817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 19741166 - 19741106
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  19741166 ttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 19741106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Original strand, 20021292 - 20021352
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    |||||||||| |||||||| ||||||  |||| |||||||| ||| |||||||||||||||    
T  20021292 ttgtggtatttaatcaagactctttgcaatttaaaaaaagttttgtggtattcaatcaaga 20021352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 24131230 - 24131170
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  24131230 ttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 24131170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Original strand, 25331079 - 25331139
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  25331079 ttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 25331139  T

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Target: chr4; HSP #96
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 25504897 - 25504837
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  25504897 ttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 25504837  T

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Target: chr4; HSP #97
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Original strand, 28541646 - 28541706
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  28541646 ttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaga 28541706  T

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Target: chr4; HSP #98
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 376 - 428
Target Start/End: Original strand, 29855676 - 29855728
Alignment:
Q  376 gtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatca 428  Q
    ||||| |||||||| | ||||||||||||||||| | ||||||||||||||||    
T  29855676 gtatttaatcaagactgtttgtcattttaaaaaaattttgaggtattcaatca 29855728  T

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Target: chr4; HSP #99
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 32951094 - 32951034
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  32951094 ttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaga 32951034  T

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Target: chr4; HSP #100
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 37046710 - 37046650
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  37046710 ttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaga 37046650  T

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Target: chr4; HSP #101
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 39479615 - 39479555
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  39479615 ttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaga 39479555  T

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Target: chr4; HSP #102
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 400 - 436
Target Start/End: Original strand, 40143822 - 40143858
Alignment:
Q  400 ttttaaaaaagtcttgaggtattcaatcaagactttt 436  Q
    ||||||||||||||| |||||||||||||||||||||    
T  40143822 ttttaaaaaagtctttaggtattcaatcaagactttt 40143858  T

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Target: chr4; HSP #103
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 389 - 433
Target Start/End: Original strand, 41320786 - 41320830
Alignment:
Q  389 attctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||    
T  41320786 attctttatcatttaaaaaaagtcttgtggtattcaatcaagact 41320830  T

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Target: chr4; HSP #104
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 400 - 436
Target Start/End: Original strand, 54509760 - 54509796
Alignment:
Q  400 ttttaaaaaagtcttgaggtattcaatcaagactttt 436  Q
    ||||||||||||||| |||||||||||||||||||||    
T  54509760 ttttaaaaaagtctttaggtattcaatcaagactttt 54509796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 267 - 322
Target Start/End: Original strand, 2294719 - 2294774
Alignment:
Q  267 ttttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaa 322  Q
    |||||||||||||||||||||||||| ||||||| |  |||||  |||||||||||    
T  2294719 ttttagggtgaggggatggtgccccagtctaaggcagtgaagactttcgggctcaa 2294774  T

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Target: chr4; HSP #106
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 28202782 - 28202703
Alignment:
Q  270 tagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||  ||||  |||| ||||||||||||| |||||| ||| || ||||||| | | ||||||||    
T  28202782 tagggtgaggggatggtgcatcaattaaaggcaaggaagatcttcaggctcatagaacacttacaaatgcatttacattt 28202703  T

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Target: chr4; HSP #107
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 433
Target Start/End: Original strand, 32322038 - 32322101
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    |||||||||||||||||||||| ||||| | || ||||||||| || | |||| ||||||||||    
T  32322038 tttgtggtattcaatcaagattttttgtaacttaaaaaaagtcatgtgatatttaatcaagact 32322101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #108
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 433
Target Start/End: Original strand, 51320868 - 51320931
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    |||||||||||||||||||| | ||||  | || |||||||| ||| |||||||||||||||||    
T  51320868 tttgtggtattcaatcaagactttttgcaacttaaaaaaagttttgtggtattcaatcaagact 51320931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #109
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 502 - 556
Target Start/End: Complemental strand, 19740983 - 19740929
Alignment:
Q  502 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaa 556  Q
    |||||||||||||||||| ||||| ||||||| |  |||||||| ||||||||||    
T  19740983 tggattttgtgggattttctagtgaaattttagcttgaaaaagtctttcatgaaa 19740929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #110
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 452 - 510
Target Start/End: Complemental strand, 27454213 - 27454155
Alignment:
Q  452 gttttgtggtattcaaaatcattcaaatttcgaattattgtttaataaattggattttg 510  Q
    |||| ||||||||||||||||||||||||| |||  ||| ||||||||||  |||||||    
T  27454213 gtttagtggtattcaaaatcattcaaattttgaaagattatttaataaatcagattttg 27454155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #111
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 37828660 - 37828598
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  | || |||||| ||||| |||||||||||||||||    
T  37828660 ttgtggtattcaatcaagactttttgcaaattaaaaaaaatcttgtggtattcaatcaagact 37828598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #112
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 425
Target Start/End: Original strand, 42786716 - 42786770
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaa 425  Q
    ||||||||||||||||||| ||||  |||||| |||||||||| | |||||||||    
T  42786716 ttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaa 42786770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #113
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 263 - 349
Target Start/End: Original strand, 47626992 - 47627078
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||||||||||| |||||||  ||| || |||| | |||||| ||||| | |||||||| ||||| | ||||| ||||||||    
T  47626992 aaaattttagggtgaggagatggtgttccagtccaaggcagggaagaccttcgagttcaaagagtatttatagaggtatttacattt 47627078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #114
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 49835071 - 49835009
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||| | | ||||  | || |||||||||||| |||||||||||||||||    
T  49835071 ttgtggtattcaatcaaaactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 49835009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #115
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 50018199 - 50018261
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | |||   |||| |||||||||||  |||||||||||||||||    
T  50018199 ttgtggtattcaatcaagactttttacaatttaaaaaaagtcttatggtattcaatcaagact 50018261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #116
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 328
Target Start/End: Original strand, 23084468 - 23084529
Alignment:
Q  267 ttttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagca 328  Q
    ||||||||||||| |||||| ||||| |  |||||| |||||| |||||| |||||||||||    
T  23084468 ttttagggtgaggagatggtaccccagttcaaggtagggaagaccttcggactcaaagagca 23084529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #117
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 502 - 582
Target Start/End: Complemental strand, 24131057 - 24130976
Alignment:
Q  502 tggattttgtgggattttgtagtgtaattttaacaag-aaaaagtatttcatgaaaagatgagatttcctgagattgttttt 582  Q
    |||||||||||||||||| ||||| |||||||  | | ||||| | ||||||||||| |||||||||| |  ||||||||||    
T  24131057 tggattttgtgggattttctagtgaaattttaggatgaaaaaaatctttcatgaaaacatgagatttcttaggattgttttt 24130976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #118
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 436
Target Start/End: Complemental strand, 28100617 - 28100584
Alignment:
Q  403 taaaaaagtcttgaggtattcaatcaagactttt 436  Q
    ||||||||||||| ||||||||||||||||||||    
T  28100617 taaaaaagtcttgtggtattcaatcaagactttt 28100584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #119
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 436
Target Start/End: Original strand, 50018189 - 50018222
Alignment:
Q  403 taaaaaagtcttgaggtattcaatcaagactttt 436  Q
    ||||||||||||| ||||||||||||||||||||    
T  50018189 taaaaaagtcttgtggtattcaatcaagactttt 50018222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #120
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 467830 - 467882
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtatt 422  Q
    ||||| ||||||||| |||||| ||||  |||| |||||||||||||||||||    
T  467830 tttgtcgtattcaattaagattatttgcaatttaaaaaaagtcttgaggtatt 467882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #121
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 370 - 431
Target Start/End: Original strand, 7007320 - 7007382
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcatttt--aaaaaagtcttgaggtattcaatcaaga 431  Q
    |||||||||||||||||||| ||||| ||| |||  |||||||||||| | |||||||||||||    
T  7007320 tttgtggtattcaatcaagactcttt-tcaatttaaaaaaaagtcttgtgttattcaatcaaga 7007382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #122
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 371 - 431
Target Start/End: Original strand, 22201963 - 22202023
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||| ||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  22201963 ttgtgatattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 22202023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #123
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 400 - 436
Target Start/End: Original strand, 26336123 - 26336159
Alignment:
Q  400 ttttaaaaaagtcttgaggtattcaatcaagactttt 436  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  26336123 ttttaaaaatgtctttaggtattcaatcaagactttt 26336159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #124
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 370 - 422
Target Start/End: Complemental strand, 29649926 - 29649874
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtatt 422  Q
    |||||||||||||||||||| | ||||  |||| |||||||||||| ||||||    
T  29649926 tttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtatt 29649874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #125
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 392 - 436
Target Start/End: Original strand, 41762017 - 41762061
Alignment:
Q  392 ctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt 436  Q
    |||||| ||| ||||||||||||| |||||| |||||||||||||    
T  41762017 ctttgtgattataaaaaagtcttgtggtattgaatcaagactttt 41762061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #126
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 400 - 436
Target Start/End: Original strand, 47685190 - 47685226
Alignment:
Q  400 ttttaaaaaagtcttgaggtattcaatcaagactttt 436  Q
    |||||||||| |||| |||||||||||||||||||||    
T  47685190 ttttaaaaaaatctttaggtattcaatcaagactttt 47685226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 149; Significance: 2e-78; HSPs: 93)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 371 - 592
Target Start/End: Complemental strand, 38536305 - 38536084
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||  |||       || ||||||||||||||||    
T  38536305 ttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaat 38536206  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
     ||||||||||| ||  |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |    
T  38536205 tattcaaatttcaaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 38536106  T
Q  571 gagattgtttttcttttaaaag 592  Q
    ||||||||||||||||||||||    
T  38536105 gagattgtttttcttttaaaag 38536084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 371 - 592
Target Start/End: Complemental strand, 38558523 - 38558302
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||  |||       || ||||||||||||||||    
T  38558523 ttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaat 38558424  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
     ||||||||||| ||  |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |    
T  38558423 tattcaaatttcaaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 38558324  T
Q  571 gagattgtttttcttttaaaag 592  Q
    ||||||||||||||||||||||    
T  38558323 gagattgtttttcttttaaaag 38558302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 29219272 - 29219491
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||| |||||||||||||||||||||| |||       || ||||||||||||||||    
T  29219272 ttgtggtattcaatcaagactct--gtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaat 29219369  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
    ||||||||||  |||  |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  29219370 cattcaaattaagaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttctt 29219469  T
Q  571 gagattgtttttcttttaaaag 592  Q
    ||||||||||||||||||||||    
T  29219470 gagattgtttttcttttaaaag 29219491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 371 - 592
Target Start/End: Complemental strand, 48177678 - 48177447
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| | |||||||| |||       || ||||||||||||||||    
T  48177678 ttgtggtattcaatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaagtcttgtggtattcaaaat 48177579  T
Q  471 cattcaaatttcgaattattgtttaataaattggat----------tttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||| |||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  48177578 cattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 48177479  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||| |||||||||||||||||||||||    
T  48177478 gagatttcttgagattgtttttcttttaaaag 48177447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 370 - 592
Target Start/End: Original strand, 6312557 - 6312789
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaa 469  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||       || |||||||||||||||    
T  6312557 tttgtggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaa 6312656  T
Q  470 tcattcaaatttcgaattattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaaga 559  Q
    ||||||||||||||||  ||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  6312657 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 6312756  T
Q  560 tgagatttcctgagattgtttttcttttaaaag 592  Q
    ||||||||| ||||||||||||| |||||||||    
T  6312757 tgagatttcttgagattgtttttattttaaaag 6312789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 374 - 592
Target Start/End: Complemental strand, 29396601 - 29396373
Alignment:
Q  374 tggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcat 473  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||       || |||||||||||||||||||    
T  29396601 tggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcat 29396502  T
Q  474 tcaaatttcgaattattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgag 563  Q
    ||||||||||||  |||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29396501 tcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 29396402  T
Q  564 atttcctgagattgtttttcttttaaaag 592  Q
    ||||| ||||||||||||| |||||||||    
T  29396401 atttcttgagattgtttttgttttaaaag 29396373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 51701564 - 51701795
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||       || ||||||||||||||||    
T  51701564 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 51701663  T
Q  471 cattcaaatttcgaattattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  51701664 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 51701763  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||  ||||||||||||| |||||||||    
T  51701764 gagattttttgagattgtttttattttaaaag 51701795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 25612141 - 25612372
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||  ||       || ||||||||||||||||    
T  25612141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaat 25612240  T
Q  471 cattcaaatttcgaattattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||| ||  ||||||||||||||||||          ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  25612241 cattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagaaaaagtctttcatgaaaagat 25612340  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||| ||||||||||||| |||||||||    
T  25612341 gagatttcttgagattgtttttattttaaaag 25612372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 18798475 - 18798686
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||       || ||||||||||||||||    
T  18798475 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 18798574  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
    |||||||||||||||  |||||||||||||||          ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||      
T  18798575 cattcaaatttcgaaggattgtttaataaatt----------ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcta 18798664  T
Q  571 gagattgtttttcttttaaaag 592  Q
    |||||||||||| |||||||||    
T  18798665 gagattgtttttgttttaaaag 18798686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 370 - 591
Target Start/End: Complemental strand, 9322717 - 9322486
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaa 469  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||  ||       ||  ||||||||||||||    
T  9322717 tttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcgatcaagacttttcatcatttaaaaaaagtcctgtggtattcaaaa 9322618  T
Q  470 tcattcaaatttcgaattattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaaga 559  Q
    |||||||||||| |||  |||||||||||||||| ||||||          ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  9322617 tcattcaaatttagaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 9322518  T
Q  560 tgagatttcctgagattgtttttcttttaaaa 591  Q
    ||||||||| ||||||||||||| ||||||||    
T  9322517 tgagatttcttgagattgtttttattttaaaa 9322486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 371 - 592
Target Start/End: Complemental strand, 15835269 - 15835038
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||  ||        | ||||||||||||||||    
T  15835269 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtattcaaaat 15835170  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||| | ||  |||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15835169 cattcaaattgcaaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 15835070  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||| ||||||||||||| |||||||||    
T  15835069 gagatttcttgagattgtttttgttttaaaag 15835038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 46328026 - 46328257
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||       || | ||||||||||||||    
T  46328026 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtctcgtggtattcaaaat 46328125  T
Q  471 cattcaaatttcgaattattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  |||||||||| |||||||          |||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  46328126 cattcaaatttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagat 46328225  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
     |||||||  || |||||||||||||||||||    
T  46328226 aagatttctcgaaattgtttttcttttaaaag 46328257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 370 - 592
Target Start/End: Complemental strand, 48668989 - 48668770
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaa 469  Q
    |||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||    |||||||| |||       ||   |||||||||||||    
T  48668989 tttgtgatattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcat---ttttcatcacttaaaaaaagtcacgtggtattcaaaa 48668893  T
Q  470 tcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcc 569  Q
    | ||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||      
T  48668892 ttattcaaatttcgaaagattgtttaataaattggattttgtgggattctgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttgt 48668793  T
Q  570 tgagattgtttttcttttaaaag 592  Q
    || ||||||||||||||||||||    
T  48668792 tgggattgtttttcttttaaaag 48668770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 371 - 566
Target Start/End: Complemental strand, 5495312 - 5495117
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||       || | ||||||||||||||    
T  5495312 ttgtggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaat 5495213  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatt 566  Q
    |||| ||||||| ||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||    
T  5495212 catttaaatttcaaaggattatttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtcctttatgaaaagatgagatt 5495117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 374 - 592
Target Start/End: Complemental strand, 28387606 - 28387378
Alignment:
Q  374 tggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcat 473  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||        | |||||||||||||| ||||    
T  28387606 tggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaattcat 28387507  T
Q  474 tcaaatttcgaattattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgag 563  Q
    ||||||||||||  |||||||||||||||||||||||          |||||||||||||| |||||||||||| ||||||| |||||| ||||||||||    
T  28387506 tcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtttaattttaacaaaaaaaagtctttcataaaaagatgag 28387407  T
Q  564 atttcctgagattgtttttcttttaaaag 592  Q
    ||||| ||||||||||||| |||||||||    
T  28387406 atttcttgagattgtttttgttttaaaag 28387378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 45272571 - 45272790
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    |||| |||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||| |||        | | ||||||||||||||    
T  45272571 ttgttgtattcaatcaaaactctttgtcattttaaaaa-gtcttgaggtattcaatcaagacttttcatcacttaaaaaaaatctcgtggtattcaaaat 45272669  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
     ||| ||||||||||  || |||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||| || ||||||||||||||  |    
T  45272670 tatttaaatttcgaaggat-gtttaataaattggattttgtgagattttgtagtgtaattttaacaagaaaaaatcttttataaaaagatgagatttttt 45272768  T
Q  571 gagattgtttttcttttaaaag 592  Q
    ||||||||||||||||||||||    
T  45272769 gagattgtttttcttttaaaag 45272790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 371 - 509
Target Start/End: Original strand, 49230870 - 49231008
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||       || ||||||||||||||||    
T  49230870 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaat 49230969  T
Q  471 cattcaaatttcgaattattgtttaataaattggatttt 509  Q
    |||||||||||||||  ||| ||||||||||||||||||    
T  49230970 cattcaaatttcgaaggattatttaataaattggatttt 49231008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 370 - 568
Target Start/End: Original strand, 21222130 - 21222338
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaa 469  Q
    |||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||| |||       || | | |||||||||||    
T  21222130 tttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagaggtattcaaaa 21222229  T
Q  470 tcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaaga 559  Q
    ||||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| |    
T  21222230 tcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaaca 21222329  T
Q  560 tgagatttc 568  Q
    |||||||||    
T  21222330 tgagatttc 21222338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 371 - 568
Target Start/End: Original strand, 35279656 - 35279863
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||| |||       || | ||||||||||||||    
T  35279656 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactattaatcacttaaaaaaagtctagtggtattcaaaat 35279755  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||| ||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||| |||| |||||||| ||||||||||| ||    
T  35279756 catttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttcaacatgaaaaagtctttcatgaaaacat 35279855  T
Q  561 gagatttc 568  Q
    ||||||||    
T  35279856 gagatttc 35279863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 371 - 582
Target Start/End: Complemental strand, 19452024 - 19451803
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| |||||| |||||||||| || ||| |||       || | ||||||||||||||    
T  19452024 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 19451925  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  || |||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||    
T  19451924 cattcaaatttcgaaggatcgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 19451825  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| |  ||||||||||    
T  19451824 gagatttcttatgattgttttt 19451803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 371 - 591
Target Start/End: Complemental strand, 9577648 - 9577418
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    |||| ||||||||||||||  |||||||||||||||||||||||||| |||| |||||| |||||| ||| |||       || ||||| ||||||||||    
T  9577648 ttgttgtattcaatcaagaccctttgtcattttaaaaaagtcttgagatattaaatcaaaactttttatcacttaaaaaaagtcttgtgatattcaaaat 9577549  T
Q  471 cattcaaatttcgaattattgtttaataaattggat----------tttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    ||||||||||| |||  |||||||||||||||||||          |||||| |||||| ||||| |||||||  | |||||| | ||||||||||| ||    
T  9577548 cattcaaatttagaaggattgtttaataaattggattttgatggattttgtgagattttctagtgaaattttagaatgaaaaaatctttcatgaaaacat 9577449  T
Q  561 gagatttcctgagattgtttttcttttaaaa 591  Q
    |||||||| || |||||||||||||||||||    
T  9577448 gagatttcttgggattgtttttcttttaaaa 9577418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 371 - 582
Target Start/End: Complemental strand, 28824588 - 28824368
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| ||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||| || ||| |||       || ||||||||||||||||    
T  28824588 ttgtgttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaacagtcttgtggtattcaaaat 28824489  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||| ||| | |||||||||| |||||||| ||| || |||| ||    
T  28824488 cattcaaatttcgaa-gattgtttaataaatcagattttgatggattttgtgggattttctagggaaattttaacatgaaaaagtcttttataaaaacat 28824390  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| |  ||||||||||    
T  28824389 gagatttcttaggattgttttt 28824368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 371 - 580
Target Start/End: Complemental strand, 35679344 - 35679125
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    |||||||||||||||||||||||||||||||| |||||| |||||  |||||||||||||||| || ||| |||       ||  |||||||||||||||    
T  35679344 ttgtggtattcaatcaagattctttgtcatttaaaaaaaatcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcatgtggtattcaaaat 35679245  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          |||||||  ||||||||| ||||| ||||||| || |||||||| ||||||||| | ||    
T  35679244 cattcaaatttcgaaggattgtttaataaatcagattttgatggatttgatgggattttctagtgaaattttagcatgaaaaagtctttcatgaagacat 35679145  T
Q  561 gagatttcctgagattgttt 580  Q
    |||||||| | |||||||||    
T  35679144 gagatttcttaagattgttt 35679125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 371 - 567
Target Start/End: Complemental strand, 50192767 - 50192560
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgctt-nnnnnnngttttgtggtattcaaaa 469  Q
    ||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| || ||| |||        || | |||||||||||||    
T  50192767 ttgtgttattcaatcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaa 50192668  T
Q  470 tcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaaga 559  Q
    |||||||||||| |||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| |    
T  50192667 tcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaaca 50192568  T
Q  560 tgagattt 567  Q
    ||||||||    
T  50192567 tgagattt 50192560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 371 - 582
Target Start/End: Complemental strand, 45760226 - 45760004
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaa-gtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaa 469  Q
    ||||| ||||||||||||||||||||||| ||||||||| ||| || ||||||||||||||||| || ||| |||       || | |||||||||||||    
T  45760226 ttgtgttattcaatcaagattctttgtcaatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaa 45760127  T
Q  470 tcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaaga 559  Q
    ||||||||| ||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||| ||||||| |    
T  45760126 tcattcaaacttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttgatgaaaaca 45760027  T
Q  560 tgagatttcctgagattgttttt 582  Q
    ||||||||| |  ||||||||||    
T  45760026 tgagatttcttaggattgttttt 45760004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 377 - 589
Target Start/End: Original strand, 33025502 - 33025716
Alignment:
Q  377 tattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga-cttttcatcgcttnnnnnnngttttgtggtattcaaaatcattc 475  Q
    |||||||||||||||||||| |||||| ||||| ||||| ||||||||||||| | || || ||| |||       || |||||||||||||||||||||    
T  33025502 tattcaatcaagattctttgacatttttaaaaattcttgtggtattcaatcaaaaactcttaatcacttaaaaaaagtcttgtggtattcaaaatcattc 33025601  T
Q  476 aaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcctgagat 575  Q
    |||||| |||  ||||||||||| ||  |||||||||||||||| || |  ||||||| || |||||||| ||||||||||| |||||||||| |  |||    
T  33025602 aaattttgaaggattgtttaatacatcagattttgtgggattttctaataaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgat 33025701  T
Q  576 tgt-ttttcttttaa 589  Q
    ||| |||||||||||    
T  33025702 tgtgttttcttttaa 33025716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 371 - 582
Target Start/End: Complemental strand, 49198484 - 49198264
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| |||||||| ||| |||||||||| |||||| || ||| |||       |||  ||||||||||||||    
T  49198484 ttgtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaat-aagactcttaatcacttaaaaaaagttcagtggtattcaaaat 49198386  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||    
T  49198385 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 49198286  T
Q  561 gagatttcctgagattgttttt 582  Q
    || ||||| |  ||||||||||    
T  49198285 gatatttcttaggattgttttt 49198264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 371 - 557
Target Start/End: Original strand, 45535928 - 45536124
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| ||||||||||| |||||||||||||| || ||||| ||| ||||||||||||||||| || |||||||       || | ||||||||||||||    
T  45535928 ttgtgttattcaatcaatattctttgtcatttaaacaaagtgttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtattcaaaat 45536027  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaa 557  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| |||||||||||    
T  45536028 cattcaaatttcgaaagattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 45536124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 372 - 582
Target Start/End: Complemental strand, 6304468 - 6304247
Alignment:
Q  372 tgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatc-aagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    |||| |||||||||||||||||||||||||| |||||||||||| ||||||||| | || ||| || ||| |||       || | ||||||||||||||    
T  6304468 tgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaaccaaaaactcttaatcacttaaaaaaagtctagtggtattcaaaat 6304369  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||    
T  6304368 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 6304269  T
Q  561 gagatttcctgagattgttttt 582  Q
    || ||||| |  ||||||||||    
T  6304268 gaaatttcttatgattgttttt 6304247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 368 - 582
Target Start/End: Complemental strand, 47654571 - 47654346
Alignment:
Q  368 tctttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgctt-nnnnnnngttttgtggtattca 466  Q
    |||||||| |||||||||||||||||||||||||| ||| |||||||| ||||||||||||| ||| || ||| |||        || | ||||||||||    
T  47654571 tctttgtgttattcaatcaagattctttgtcatttaaaagaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaaagtctagtggtattca 47654472  T
Q  467 aaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaa 556  Q
    |||| ||||||||||||||  ||||||||||||||          |||||||||||| ||||| ||| | ||||||| || |||||||||||||||||||    
T  47654471 aaattattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagggaaattttagcatgaaaaagtatttcatgaaa 47654372  T
Q  557 agatgagatttcctgagattgttttt 582  Q
    | |||||||||| |  ||||||||||    
T  47654371 acatgagatttcttaggattgttttt 47654346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 371 - 582
Target Start/End: Original strand, 47780695 - 47780916
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| ||||||||||||||| | |||||||| ||||||||| || ||||||||||||||||| || ||| |||       || | ||| ||||||||||    
T  47780695 ttgtgttattcaatcaagattatatgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaat 47780794  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||| ||  ||  ||||||||||||||          |||||||||||||||||| ||||| |||||||||| |||||||| ||||||||||| ||    
T  47780795 cattcaaaattaaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaacatgaaaaagtttttcatgaaaacat 47780894  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| | |||||||||||    
T  47780895 gagatttcttaagattgttttt 47780916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 371 - 521
Target Start/End: Original strand, 730132 - 730283
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgctt-nnnnnnngttttgtggtattcaaaa 469  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||| |||        || | |||||||||||||    
T  730132 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaa 730231  T
Q  470 tcattcaaatttcgaattattgtttaataaattggattttgtgggattttgt 521  Q
    |||||||||||||||   ||||||||||||||  |||||||  |||||||||    
T  730232 tcattcaaatttcgacgaattgtttaataaatcagattttgatggattttgt 730283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 370 - 440
Target Start/End: Complemental strand, 8141345 - 8141275
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatc 440  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  8141345 tttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactattcatc 8141275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 30054445 - 30054527
Alignment:
Q  267 ttttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||| || |||| | |||||| |||||||||||||||||||||||||||||||||||||||    
T  30054445 ttttagggtgaggggatggtgccccagtccaaggcagggaagaccttcgggctcaaagagcatttacaaaggtaattacattt 30054527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 371 - 589
Target Start/End: Complemental strand, 37014856 - 37014628
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    |||||||||||||| |||| ||||||||||||  || |||||||| ||||||||||||| | | |||||| |||       || ||||| ||||||||||    
T  37014856 ttgtggtattcaattaagactctttgtcatttagaagaagtcttgtggtattcaatcaatattcttcatcacttaaaaaaagtcttgtgatattcaaaat 37014757  T
Q  471 cattcaaatttcgaattattgtttaataaattg----------gattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||| ||  ||||||| ||||||||          |||||||| ||||||| ||||| ||||||| || |||||||| | |||| |||| ||    
T  37014756 cattcaaatttctaaagattgttttataaattgaattttgatggattttgtcggattttctagtgaaattttagcatgaaaaagtctctcataaaaacat 37014657  T
Q  561 gagatttcctgagattgtttttcttttaa 589  Q
    |||||||| | ||||||||||||| ||||    
T  37014656 gagatttcttaagattgtttttctcttaa 37014628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 264 - 349
Target Start/End: Complemental strand, 22024235 - 22024150
Alignment:
Q  264 aaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||||||||||||||||||||||| || |||| |  ||||| |||||||||||||||||| ||||||||||||||||||||    
T  22024235 aaattttagggtgaggggatggtgccccagtccaaggcagagaagaccttcgggctcaaagagcacttacaaaggtaattacattt 22024150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 265 - 349
Target Start/End: Original strand, 30370061 - 30370145
Alignment:
Q  265 aattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||| |||||||||||||||||||| || |||| | |||||| |||||||||||||||||| ||||||||||||||||||||    
T  30370061 aattttaaggtgaggggatggtgccccagtccaaggcagggaagaccttcgggctcaaagagcacttacaaaggtaattacattt 30370145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 374 - 567
Target Start/End: Complemental strand, 32589166 - 32588963
Alignment:
Q  374 tggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcat 473  Q
    |||||||||||||||| ||||| |||||  | || | ||||| || |||||||||||||| |||||| |||       || |||||||||||||||||||    
T  32589166 tggtattcaatcaagactctttatcattaaacaagaatcttgtggcattcaatcaagactcttcatcacttaaaagaagtcttgtggtattcaaaatcat 32589067  T
Q  474 tcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgag 563  Q
    |||||||| |||  ||||||||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||| ||||||||||| |||||    
T  32589066 tcaaattttgaaggattgtttaataaatcggattttgatggattttgtgagattttctagtgaaattttagcataaaaaagtctttcatgaaaacatgag 32588967  T
Q  564 attt 567  Q
    ||||    
T  32588966 attt 32588963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 371 - 568
Target Start/End: Original strand, 49418068 - 49418275
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||| ||||||||| |||||| |  || |||||||||| |||||| || ||| |||       || | ||||||||||||||    
T  49418068 ttgtgttattcaatcaagattcattgtcatttaaaaaaaattatgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 49418167  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||| ||  ||||||||||||||          |||||||||||||||||| || || ||||||| || |||||| | ||||||||||| ||    
T  49418168 cattcaaatttcaaaggattgtttaataaatcagattttgatggattttgtgggattttctattgaaattttagcatgaaaaaatctttcatgaaaatat 49418267  T
Q  561 gagatttc 568  Q
    ||||||||    
T  49418268 gagatttc 49418275  T

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Target: chr1; HSP #40
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 20014591 - 20014505
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||||||||||||||||||||| || || |||| | |||||| |||| ||||||||||||||||||||| ||||||||||||    
T  20014591 aaaattttagggtgaggggatggtgcctcagtccaaggcagggaagaccttcaggctcaaagagcatttacaaatgtaattacattt 20014505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 273 - 349
Target Start/End: Original strand, 35371754 - 35371830
Alignment:
Q  273 ggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||| || |||| | |||||| |||||||||||||||||| ||||||||||||||||||||    
T  35371754 ggtgaggggatggtgccccagtccaaggcagggaagaacttcgggctcaaagagcacttacaaaggtaattacattt 35371830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 371 - 545
Target Start/End: Original strand, 48524303 - 48524487
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| ||||||||||||||| |||||||||| |||||| || || |||||| |||||| ||| || ||| |||       || ||||| ||||||||||    
T  48524303 ttgtgttattcaatcaagattttttgtcatttaaaaaaattcatgtggtatttaatcaaaactcttaatcacttaaaaaaagtcttgtgatattcaaaat 48524402  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagt 545  Q
    ||||||||||| |||  ||||||||||||||          |||||||||||||||||| ||||| |||||||||| ||||||||    
T  48524403 cattcaaattttgaaagattgtttaataaatcagtttttgatggattttgtgggattttctagtgaaattttaacatgaaaaagt 48524487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 371 - 519
Target Start/End: Original strand, 29556088 - 29556236
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||| ||||||| |||| |||| |||||||||||| | ||||||||||||||| || ||| |||        | | ||| ||||||||||    
T  29556088 ttgtgttattcaattaagattcattgttatttaaaaaaagtcttgtgttattcaatcaagactcttaatcacttaaaaaaaatctagtgttattcaaaat 29556187  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggatttt 519  Q
    |||||||||||||||  ||||||||||||||| |||||||  |||||||    
T  29556188 cattcaaatttcgaaagattgtttaataaattagattttgatggatttt 29556236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 12025314 - 12025228
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||||||||||||| |||||||||| || |||| | |||||| ||||||||||||| || | ||||||||||||||||||||    
T  12025314 aaaattttagggtgagggggtggtgccccagtccaaggcagggaagaccttcgggctcaaatagtacttacaaaggtaattacattt 12025228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 263 - 349
Target Start/End: Original strand, 14498078 - 14498164
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||||||||||||||||| |||||| || |||| | |||||| ||| || ||||||||||| ||||||||||||||||||||    
T  14498078 aaaattttagggtgaggggatggcgccccagtccaaggcagggaagacctttggtctcaaagagcacttacaaaggtaattacattt 14498164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 21090244 - 21090162
Alignment:
Q  267 ttttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||| ||||||||||||||||||| || |||| | |||||| |||||||||||||||||||||||||| ||| ||||||||    
T  21090244 ttttagagtgaggggatggtgccccagtccaaggcagggaagaccttcgggctcaaagagcatttacaaatgtatttacattt 21090162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 45324139 - 45324053
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||||||| || || | | |||||| |||||||||||| ||||| ||||||||||| ||||||||    
T  45324139 aaaattttagggtgaggggatggtgccccagtccaaagcagggaagaccttcgggctcaaggagcacttacaaaggtatttacattt 45324053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 370 - 431
Target Start/End: Original strand, 22183353 - 22183414
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    |||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  22183353 tttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaga 22183414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 371 - 543
Target Start/End: Original strand, 47784371 - 47784542
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| ||||||||||||| | ||||  | || |||||||||||| ||||||||||||||||| ||  ||  ||       || ||||||||||||||||    
T  47784371 ttgtgatattcaatcaagactttttgcaagttaaaaaaagtcttgtggtattcaatcaagactctttgtca-tttaaaaaagtcttgtggtattcaaaat 47784469  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaa 543  Q
     ||||||| ||| ||  ||||||||||||||||||||||||| |||||| ||||  ||||||| || ||||||    
T  47784470 tattcaaacttctaaagattgtttaataaattggattttgtgagattttctagttaaattttagcatgaaaaa 47784542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 953803 - 953865
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||    
T  953803 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcgatcaagact 953865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 455 - 568
Target Start/End: Complemental strand, 31572329 - 31572206
Alignment:
Q  455 ttgtggtattcaaaatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaag 544  Q
    |||||||||||||||||||| ||||||||||  ||||||||||||||          |||||||||||||||||| ||||| |||||||  | |||||||    
T  31572329 ttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttaggatgaaaaag 31572230  T
Q  545 tatttcatgaaaagatgagatttc 568  Q
    | ||||||||||  ||||||||||    
T  31572229 tctttcatgaaatcatgagatttc 31572206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 263 - 349
Target Start/End: Original strand, 33762539 - 33762625
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||| ||||||| || |||| | |||| |  |||||||||||| | || ||||||||||||||||||||    
T  33762539 aaaattttagggtgaggggatgatgccccagtccaaggcagggaaaactttcgggctcaaaaaacacttacaaaggtaattacattt 33762625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 267 - 337
Target Start/End: Complemental strand, 35618104 - 35618034
Alignment:
Q  267 ttttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaag 337  Q
    |||||||||||||||||||| ||||| || || | |||||||| |||||||||||||||||| ||||||||    
T  35618104 ttttagggtgaggggatggtaccccagtccaaagcaaggaagaccttcgggctcaaagagcacttacaaag 35618034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 265 - 349
Target Start/End: Original strand, 30850841 - 30850925
Alignment:
Q  265 aattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||||| || |||  | | |||| ||||||| |||||||||| ||||||||| ||||| ||||    
T  30850841 aattttagggtgaggggatggtgccccagtccaagacaggaaagaccttcgggttcaaagagcacttacaaaggcaattatattt 30850925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 455 - 519
Target Start/End: Complemental strand, 31622591 - 31622527
Alignment:
Q  455 ttgtggtattcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggatttt 519  Q
    |||| ||||||||||||||||||||||| ||  |||||||||||||| |||||||||| ||||||    
T  31622591 ttgttgtattcaaaatcattcaaatttcaaaagattgtttaataaatcggattttgtgagatttt 31622527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 4573512 - 4573426
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||||||||||||||| ||||| || || ||   | |||||| ||||| |||||||||||| ||||||||||| ||||||||    
T  4573512 aaaattttagggtgaggggatagtgcctcagtccaaaacagggaagaccttcgagctcaaagagcacttacaaaggtatttacattt 4573426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 15835311 - 15835249
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  |||| |||||||||||| |||||||||||||||||    
T  15835311 ttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 15835249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 19452108 - 19452046
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| |||||||||||||||||    
T  19452108 ttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtggtattcaatcaagact 19452046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 25612099 - 25612161
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  |||| |||||||||||| |||||||||||||||||    
T  25612099 ttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 25612161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 460 - 533
Target Start/End: Original strand, 955823 - 955896
Alignment:
Q  460 gtattcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaatttta 533  Q
    ||||||||||||||||||||||||||   |||||||||||||  |||||||  ||||||| ||||| |||||||    
T  955823 gtattcaaaatcattcaaatttcgaagggttgtttaataaatcagattttgatggattttctagtgaaatttta 955896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 349
Target Start/End: Original strand, 33763254 - 33763339
Alignment:
Q  264 aaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||||||||||||||| ||||||| |  |||| | |||| |  |||||||||||| | || ||||||||||||||||||||    
T  33763254 aaattttagggtgaggggatgatgccccagttcaaggcagggaaaactttcgggctcaaaaaacacttacaaaggtaattacattt 33763339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 415
Target Start/End: Original strand, 14494193 - 14494237
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttg 415  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||    
T  14494193 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttg 14494237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 28824630 - 28824570
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| ||||| | |||| |||||||||||| | |||||||||||||    
T  28824630 ttgtggtattcaatcaagactctttctaatttaaaaaaagtcttgtgttattcaatcaaga 28824570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 49198525 - 49198466
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||||| | |||||||||||||    
T  49198525 ttgtggtattcaatcaagactcttt-tcaatttaaaaaagtcttgtgttattcaatcaaga 49198466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 370 - 433
Target Start/End: Original strand, 51701521 - 51701584
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    |||||||||||||||||||| | ||||  |||| |||| ||||||| |||||||||||||||||    
T  51701521 tttgtggtattcaatcaagactttttgcaatttaaaaatagtcttgtggtattcaatcaagact 51701584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 18798433 - 18798495
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  | || |||||||||||| |||||||||||||||||    
T  18798433 ttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 18798495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 29219230 - 29219292
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  | || |||||||||||| |||||||||||||||||    
T  29219230 ttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 29219292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 10896845 - 10896882
Alignment:
Q  399 attttaaaaaagtcttgaggtattcaatcaagactttt 436  Q
    |||||||||||||||| |||||||||||||||||||||    
T  10896845 attttaaaaaagtctttaggtattcaatcaagactttt 10896882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 372 - 433
Target Start/End: Original strand, 49230829 - 49230890
Alignment:
Q  372 tgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    |||||||||||||||||| | ||||  | || |||||||||||| |||||||||||||||||    
T  49230829 tgtggtattcaatcaagactttttgcaaattaaaaaaagtcttgtggtattcaatcaagact 49230890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Original strand, 730090 - 730150
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  730090 ttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 730150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Original strand, 953761 - 953821
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  953761 ttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 953821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 400 - 436
Target Start/End: Complemental strand, 1928442 - 1928406
Alignment:
Q  400 ttttaaaaaagtcttgaggtattcaatcaagactttt 436  Q
    ||||||||||||||| |||||||||||||||||||||    
T  1928442 ttttaaaaaagtctttaggtattcaatcaagactttt 1928406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Original strand, 14494151 - 14494211
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  14494151 ttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 14494211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 264 - 324
Target Start/End: Complemental strand, 17015252 - 17015192
Alignment:
Q  264 aaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaag 324  Q
    |||||||||| |||||||||||||||||| || || | | |||||| ||||||||||||||    
T  17015252 aaattttaggatgaggggatggtgccccagtccaaagcagggaagaccttcgggctcaaag 17015192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 19452066 - 19452006
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  19452066 ttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 19452006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 35679386 - 35679326
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||  |||||   |||| |||||||||||| |||||||||||||||    
T  35679386 ttgtggtattcaatcaaggctcttttcaatttaaaaaaagtcttgtggtattcaatcaaga 35679326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 400 - 436
Target Start/End: Original strand, 36402293 - 36402329
Alignment:
Q  400 ttttaaaaaagtcttgaggtattcaatcaagactttt 436  Q
    ||||||||||||||| |||||||||||||||||||||    
T  36402293 ttttaaaaaagtctttaggtattcaatcaagactttt 36402329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 50192809 - 50192749
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    |||||||||||||||||||||||||   |||| |||||| ||||| | |||||||||||||    
T  50192809 ttgtggtattcaatcaagattctttccaatttaaaaaaaatcttgtgttattcaatcaaga 50192749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 6312516 - 6312578
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  |||| |||||||| ||| |||||||||| ||||||    
T  6312516 ttgtggtattcaatcaagactttttgcaatttaaaaaaagttttgtggtattcaattaagact 6312578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 8141386 - 8141324
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  | || |||||||| ||| |||||||||||||||||    
T  8141386 ttgtggtattcaatcaagactttttgcaacttaaaaaaagttttgtggtattcaatcaagact 8141324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 425
Target Start/End: Original strand, 22183396 - 22183450
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaa 425  Q
    ||||||||||||||||||||||||  ||| || |||||||||| | |||||||||    
T  22183396 ttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaa 22183450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 29396646 - 29396584
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  |||| |||||| ||||  |||||||||||||||||    
T  29396646 ttgtggtattcaatcaagactttttgcaatttaaaaaaaatcttttggtattcaatcaagact 29396584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 431
Target Start/End: Complemental strand, 28387648 - 28387591
Alignment:
Q  374 tggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    |||||||||||||||| | ||||  |||| |||||||||||  |||||||||||||||    
T  28387648 tggtattcaatcaagactttttgcaatttaaaaaaagtcttttggtattcaatcaaga 28387591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 431
Target Start/End: Original strand, 29556045 - 29556106
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    |||||||||||||||||||| |||||   |||| |||||||||||| | |||||||| ||||    
T  29556045 tttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaattaaga 29556106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 457 - 510
Target Start/End: Original strand, 51085865 - 51085918
Alignment:
Q  457 gtggtattcaaaatcattcaaatttcgaattattgtttaataaattggattttg 510  Q
    |||||||||||||| |||||||||| |||  ||| || ||||||||||||||||    
T  51085865 gtggtattcaaaataattcaaattttgaaggattattaaataaattggattttg 51085918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 371 - 431
Target Start/End: Original strand, 22183312 - 22183372
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||| ||| | |||||||||||||    
T  22183312 ttgtggtattcaatcaagactctttccaatttaaaaaaagttttgtgttattcaatcaaga 22183372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 400 - 436
Target Start/End: Original strand, 29208801 - 29208837
Alignment:
Q  400 ttttaaaaaagtcttgaggtattcaatcaagactttt 436  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  29208801 ttttaaaaatgtctttaggtattcaatcaagactttt 29208837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 400 - 436
Target Start/End: Complemental strand, 33243348 - 33243312
Alignment:
Q  400 ttttaaaaaagtcttgaggtattcaatcaagactttt 436  Q
    |||||||||||| || |||||||||||||||||||||    
T  33243348 ttttaaaaaagtttttaggtattcaatcaagactttt 33243312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 400 - 436
Target Start/End: Complemental strand, 33263521 - 33263485
Alignment:
Q  400 ttttaaaaaagtcttgaggtattcaatcaagactttt 436  Q
    |||||||||||| || |||||||||||||||||||||    
T  33263521 ttttaaaaaagtttttaggtattcaatcaagactttt 33263485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 371 - 431
Target Start/End: Original strand, 35279614 - 35279674
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| ||||||| |||| | |||||||||||||    
T  35279614 ttgtggtattcaatcaagactctttccaatttaaaaaaagacttgtgttattcaatcaaga 35279674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 403 - 435
Target Start/End: Original strand, 42657763 - 42657795
Alignment:
Q  403 taaaaaagtcttgaggtattcaatcaagacttt 435  Q
    ||||||||||||| |||||||||||||||||||    
T  42657763 taaaaaagtcttgtggtattcaatcaagacttt 42657795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 45760268 - 45760208
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||| | |||||   |||| |||||||||||| | |||||||||||||    
T  45760268 ttgtggtattcaatcaaaactcttttcaatttaaaaaaagtcttgtgttattcaatcaaga 45760208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 376 - 436
Target Start/End: Original strand, 48524266 - 48524326
Alignment:
Q  376 gtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt 436  Q
    |||||||||||||| |||||   |||| |||||||||||| | ||||||||||||| ||||    
T  48524266 gtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattttt 48524326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 145; Significance: 5e-76; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 13873 - 14094
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||       || ||||||||||||||||    
T  13873 ttgtggtattcaatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaat 13972  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
    |||||||||||| ||  |||||||||||||||||||||||  |||||||||||||  ||||||| |||||||||| |||||||||||||||||||||| |    
T  13973 cattcaaatttcaaaagattgtttaataaattggattttgatggattttgtagtgggattttaataagaaaaagtctttcatgaaaagatgagatttctt 14072  T
Q  571 gagattgtttttcttttaaaag 592  Q
    ||||||||||||||||||||||    
T  14073 gagattgtttttcttttaaaag 14094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 145; Significance: 5e-76; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 371 - 592
Target Start/End: Complemental strand, 21454 - 21233
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||       || ||||||||||||||||    
T  21454 ttgtggtattcaatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaat 21355  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
    |||||||||||| ||  |||||||||||||||||||||||  |||||||||||||  ||||||| |||||||||| |||||||||||||||||||||| |    
T  21354 cattcaaatttcaaaagattgtttaataaattggattttgatggattttgtagtgggattttaataagaaaaagtctttcatgaaaagatgagatttctt 21255  T
Q  571 gagattgtttttcttttaaaag 592  Q
    ||||||||||||||||||||||    
T  21254 gagattgtttttcttttaaaag 21233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 492 - 592
Target Start/End: Original strand, 28463 - 28564
Alignment:
Q  492 tttaataaattggattttgtgggattttg-tagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcctgagattgtttttcttttaaa 590  Q
    |||||||||||||||||||  |||||||| |||||  ||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  28463 tttaataaattggattttgatggattttggtagtgggattttaataagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaa 28562  T
Q  591 ag 592  Q
    ||    
T  28563 ag 28564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 145; Significance: 5e-76; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 371 - 591
Target Start/End: Complemental strand, 30385272 - 30385054
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| | |||||||| |||       || ||||||||||||||||    
T  30385272 ttgtggtattcaatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggtattcaaaat 30385173  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcct 570  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||||||||||||| |    
T  30385172 cattcaaatttcgaaggattgtttaataaattggattttgtgggattttgtagtgtaattttaaca--acaaagtctttcatgaaaagatgagatttctt 30385075  T
Q  571 gagattgtttttcttttaaaa 591  Q
    |||||||||||||||||||||    
T  30385074 gagattgtttttcttttaaaa 30385054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 31895686 - 31895917
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||  ||       || ||||||||||||||||    
T  31895686 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 31895785  T
Q  471 cattcaaatttcgaattattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||||||          |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  31895786 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctagtgtaattttaacaagaaaaagtctttcatgaaaagat 31895885  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||| ||||||||||||| |||||||||    
T  31895886 gagatttcttgagattgtttttattttaaaag 31895917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 371 - 592
Target Start/End: Complemental strand, 14262648 - 14262417
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||  ||       || ||||||||||||||||    
T  14262648 ttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaat 14262549  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||| ||||||||||  |||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  14262548 catttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 14262449  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
    | |||||| |||||||||||||||||||||||    
T  14262448 gggatttcttgagattgtttttcttttaaaag 14262417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 371 - 592
Target Start/End: Complemental strand, 34759266 - 34759034
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaa-gtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaa 469  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||       || |||||||||||||||    
T  34759266 ttgtggtattcaatcaagactctttgtcattttaaaaaaagtcttgaagtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaa 34759167  T
Q  470 tcattcaaatttcgaattattgtttaataaattggat----------tttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaaga 559  Q
    ||||||||||||| ||  |||||||||||||||||||          ||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  34759166 tcattcaaatttccaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaaga 34759067  T
Q  560 tgagatttcctgagattgtttttcttttaaaag 592  Q
    ||||||||| ||||||| |||||||||||||||    
T  34759066 tgagatttcttgagattatttttcttttaaaag 34759034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 371 - 568
Target Start/End: Original strand, 34773399 - 34773606
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||        | ||||||||||||||||    
T  34773399 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaaat 34773498  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  34773499 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgcagtgtaattttaacaagaaaaagtctttcatgaaaagat 34773598  T
Q  561 gagatttc 568  Q
    ||||||||    
T  34773599 gagatttc 34773606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 455 - 592
Target Start/End: Original strand, 31067567 - 31067704
Alignment:
Q  455 ttgtggtattcaaaatcattcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatga 554  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |    
T  31067567 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataa 31067666  T
Q  555 aaagatgagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||||||||| ||||||||||||| |||||||||    
T  31067667 aaagatgagatttcttgagattgtttttattttaaaag 31067704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 374 - 592
Target Start/End: Original strand, 7497069 - 7497296
Alignment:
Q  374 tggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcat 473  Q
    |||||||||||||||| |  |||  | || |||||||||||| ||||||||||||||| |||||||| |||       || |||||||||||||||||||    
T  7497069 tggtattcaatcaagacttgttgcaacttaaaaaaagtcttgtggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcat 7497168  T
Q  474 tcaaatttcgaattattgtttaataaattggattttg--------tg-ggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgaga 564  Q
    ||||||||||||  | |||||||||||||||||||||        || ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  7497169 tcaaatttcgaaggagtgtttaataaattggattttgatggattttgtggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 7497268  T
Q  565 tttcctgagattgtttttcttttaaaag 592  Q
    |||| ||||||| |||||||||||||||    
T  7497269 tttcttgagattatttttcttttaaaag 7497296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 472 - 592
Target Start/End: Complemental strand, 4200541 - 4200421
Alignment:
Q  472 attcaaatttcgaattattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcctg 571  Q
    ||||||||||||||  |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||    
T  4200541 attcaaatttcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttg 4200442  T
Q  572 agattgtttttcttttaaaag 592  Q
    ||||||||||| |||||||||    
T  4200441 agattgtttttattttaaaag 4200421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 371 - 582
Target Start/End: Complemental strand, 6197693 - 6197472
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||| |||       || | ||||||||||||||    
T  6197693 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 6197594  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||    
T  6197593 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 6197494  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| |  ||||||||||    
T  6197493 gagatttcttaggattgttttt 6197472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 371 - 568
Target Start/End: Complemental strand, 2300953 - 2300746
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||| |||       || |  ||||||| |||||    
T  2300953 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttgatcacttaaaaaaagtctactggtattgaaaat 2300854  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||    
T  2300853 cattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 2300754  T
Q  561 gagatttc 568  Q
    ||||||||    
T  2300753 gagatttc 2300746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 371 - 523
Target Start/End: Original strand, 7051835 - 7051987
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||| | |||||||||||||||||||| |||||||||||| ||||| ||||||||||| |||||| |||       ||  |||| ||||||||||    
T  7051835 ttgtggtatacgatcaagattctttgtcatttaaaaaaagtcttgtggtatacaatcaagactcttcatcacttaaaaaaagtcgtgtgatattcaaaat 7051934  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgggattttgtag 523  Q
    |||||||||||||||  |||||||||||||||||||||||  |||||||||||    
T  7051935 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtag 7051987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 371 - 566
Target Start/End: Original strand, 1391614 - 1391819
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||| ||||||||| || ||||||||| ||||||||||||||||| || ||| |||       || | ||||||||||||||    
T  1391614 ttgtgttattcaatcaagattcattgtcatttaaataaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 1391713  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    ||||||||||| |||  ||||||||||||||          |||||||||||||||||| ||||| ||||||  || |||||||| ||||||||||| ||    
T  1391714 cattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacat 1391813  T
Q  561 gagatt 566  Q
    ||||||    
T  1391814 gagatt 1391819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 264 - 349
Target Start/End: Original strand, 19686827 - 19686912
Alignment:
Q  264 aaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||||||||||||||| ||||||| ||||||| | | ||||||||||||||||||||||| ||||||||||||||||||||    
T  19686827 aaattttagggtgaggggatgatgccccagtctaagggaggaaagatcttcgggctcaaagagcacttacaaaggtaattacattt 19686912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 371 - 513
Target Start/End: Original strand, 3848202 - 3848342
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||| | | |||||||||| ||| |||| ||| |||| |||||||||||||  |||| |||       |||||||||||||||||||    
T  3848202 ttgtggtattcaatcaaaactttttgtcatttaaaacaagtattgtggtaatcaatcaagactt--catcacttaaaaaaagttttgtggtattcaaaat 3848299  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttgtgg 513  Q
    |||| |||||| |||| |||||||||||||||| |||||||||    
T  3848300 catttaaattttgaatgattgtttaataaattgaattttgtgg 3848342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 20685458 - 20685372
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||||||||| |||||||||||||| || |||| | |||||| |||||||||||||||||| ||||||||||||||||||||    
T  20685458 aaaattttagggtgaagggatggtgccccagtccaaggcagggaagaccttcgggctcaaagagcacttacaaaggtaattacattt 20685372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 263 - 349
Target Start/End: Original strand, 35163749 - 35163835
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||||||||||||||||||||||||||| || |||| | |||||| |||||||||||||||||| ||||||||||| ||||||||    
T  35163749 aaaattttagggtgaggggatggtgccccagtccaaggcagggaagaccttcgggctcaaagagcacttacaaaggtatttacattt 35163835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 377 - 562
Target Start/End: Original strand, 28002661 - 28002856
Alignment:
Q  377 tattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcattca 476  Q
    ||||||||||||||| |||||||||| |||||||||||  ||||||||||||||||| || ||| |||       || | ||| ||||||||||||||||    
T  28002661 tattcaatcaagattttttgtcatttaaaaaaagtcttctggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattca 28002760  T
Q  477 aatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatga 562  Q
    ||||| |||  ||||||||||||||          |||||||||||  ||||| ||||| ||||||| || |||||||| ||||||||||| ||||    
T  28002761 aatttggaaggattgtttaataaatcagattttgatggattttgtgaaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 28002856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 371 - 519
Target Start/End: Original strand, 29076588 - 29076737
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgctt-nnnnnnngttttgtggtattcaaaa 469  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||| ||| | || ||| |||        || | || ||||||||||    
T  29076588 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaagtctagtagtattcaaaa 29076687  T
Q  470 tcattcaaatttcgaattattgtttaataaattggattttgtgggatttt 519  Q
    ||||||||||||||||  ||||||||||||||  |||||||  |||||||    
T  29076688 tcattcaaatttcgaaggattgtttaataaatcagattttgatggatttt 29076737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 371 - 519
Target Start/End: Original strand, 29111561 - 29111711
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgctt--nnnnnnngttttgtggtattcaaa 468  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||| ||| | || ||| |||         || | || |||||||||    
T  29111561 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaaagtctagtagtattcaaa 29111660  T
Q  469 atcattcaaatttcgaattattgtttaataaattggattttgtgggatttt 519  Q
    |||||||||||||||||  ||||||||||||||  |||||||  |||||||    
T  29111661 atcattcaaatttcgaaggattgtttaataaatcagattttgatggatttt 29111711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 17948813 - 17948727
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||| ||||||||||||||| |||| || |||  | |||||| |||||||||||||||||| ||||||||||| ||||||||    
T  17948813 aaaattttaaggtgaggggatggtgtcccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacattt 17948727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 372 - 481
Target Start/End: Original strand, 656957 - 657065
Alignment:
Q  372 tgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatc 471  Q
    |||| |||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||| || ||| |||       || | ||||||||| |||||    
T  656957 tgtgttattcaatcaagattctttg-catttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattctaaatc 657055  T
Q  472 attcaaattt 481  Q
    ||||||||||    
T  657056 attcaaattt 657065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 15070254 - 15070172
Alignment:
Q  267 ttttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||| ||||||||||||||||||||| ||||||| | |||||| |||||||||||| || || ||||||| ||||||| ||||    
T  15070254 tttttgggtgaggggatggtgccccagtctaaggcagggaagaccttcgggctcaatgaacacttacaaatgtaattatattt 15070172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 14262690 - 14262628
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||||| ||||  | || |||||||||||| |||||||||||||||||    
T  14262690 ttgtggtattcaatcaagattttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 14262628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 263 - 349
Target Start/End: Original strand, 14505524 - 14505608
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||||| |||||||||||||||||| || |||| | |||||||||||| || ||||||  |||||||||||| |||||||||    
T  14505524 aaaattttagg-tgaggggatggtgccccagtccaaggcacggaagatcttcgcgcccaaagaatatttacaaaggt-attacattt 14505608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 31895644 - 31895706
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  |||| |||||||||||| |||||||||||||||||    
T  31895644 ttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 31895706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 34773357 - 34773419
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  |||| |||||||||||| |||||||||||||||||    
T  34773357 ttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 34773419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 429
Target Start/End: Original strand, 3848114 - 3848170
Alignment:
Q  373 gtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaa 429  Q
    ||||||||||||||||||||||||  | || |||||||||||| |||||||||||||    
T  3848114 gtggtattcaatcaagattctttgcaacttaaaaaaagtcttgtggtattcaatcaa 3848170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 263 - 349
Target Start/End: Original strand, 2711739 - 2711819
Alignment:
Q  263 aaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||||||||||||||||||| ||      |||| | |||||| ||||| |||||||||||| ||||||||||| ||||||||    
T  2711739 aaaattttagggtgaggggatggtgtcc------aaggcagggaagaccttcgagctcaaagagcacttacaaaggtatttacattt 2711819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Original strand, 1391572 - 1391632
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  1391572 ttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 1391632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 2300995 - 2300935
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  2300995 ttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaga 2300935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 400 - 436
Target Start/End: Complemental strand, 10644052 - 10644016
Alignment:
Q  400 ttttaaaaaagtcttgaggtattcaatcaagactttt 436  Q
    ||||||||||||||| |||||||||||||||||||||    
T  10644052 ttttaaaaaagtctttaggtattcaatcaagactttt 10644016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 400 - 436
Target Start/End: Original strand, 30877898 - 30877934
Alignment:
Q  400 ttttaaaaaagtcttgaggtattcaatcaagactttt 436  Q
    ||||||||||||||| |||||||||||||||||||||    
T  30877898 ttttaaaaaagtctttaggtattcaatcaagactttt 30877934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 431
Target Start/End: Complemental strand, 6197734 - 6197675
Alignment:
Q  372 tgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    |||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  6197734 tgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 6197675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 425
Target Start/End: Original strand, 7497108 - 7497162
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaa 425  Q
    ||||||||||||||||||||| ||  ||| || |||||||||||| |||||||||    
T  7497108 ttgtggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaa 7497162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 124; Significance: 2e-63; HSPs: 2)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 371 - 592
Target Start/End: Original strand, 10551 - 10782
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||  ||        | ||||||||||||||||    
T  10551 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtattcaaaat 10650  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||| ||  |||||||||||||||| ||||||          ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  10651 cattcaaatttcaaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 10750  T
Q  561 gagatttcctgagattgtttttcttttaaaag 592  Q
    |||||||| ||||||||||||| |||||||||    
T  10751 gagatttcttgagattgtttttgttttaaaag 10782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 10509 - 10571
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  |||| |||||||||||| |||||||||||||||||    
T  10509 ttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 10571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 117; Significance: 3e-59; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 370 - 592
Target Start/End: Complemental strand, 39834 - 39602
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaa 469  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||  ||||||||||||| |||||||| |||       ||  ||||||||||||||    
T  39834 tttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaactattcaatcaagatttttcatcacttaaaaaatgtcatgtggtattcaaaa 39735  T
Q  470 tcattcaaatttcgaattattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaaga 559  Q
    ||||||||| ||||||  ||| |||||||||||||||||||          ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  39734 tcattcaaacttcgaaggattatttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 39635  T
Q  560 tgagatttcctgagattgtttttcttttaaaag 592  Q
    | ||||||| |||||||||||||||||||||||    
T  39634 taagatttcttgagattgtttttcttttaaaag 39602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 109; Significance: 2e-54; HSPs: 2)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 371 - 582
Target Start/End: Original strand, 854 - 1075
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnn-gttttgtggtattcaaaa 469  Q
    ||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||| |||        || |||||||||||||||    
T  854 ttgtggtattcaatcaagactctttgtcattttaaaaaaatcatgaggtattcaatcaagacttttcatcacttaaaaaaaagtcttgtggtattcaaaa 953  T
Q  470 tcattcaaatttcgaattattgtttaataaat---------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    ||||||||||||||||  ||| ||||||||||         |||||||||||||||||||||||||||||||||| ||||||||| |||||| |||| ||    
T  954 tcattcaaatttcgaagaattatttaataaatagattttgatggattttgtgggattttgtagtgtaattttaactagaaaaagtctttcattaaaatat 1053  T
Q  561 gagatttcctgagattgttttt 582  Q
    |||||||| |||||||||||||    
T  1054 gagatttcttgagattgttttt 1075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 812 - 874
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  | || |||||||||||| |||||||||||||||||    
T  812 ttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 105; Significance: 4e-52; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 371 - 592
Target Start/End: Complemental strand, 58292 - 58061
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt-catcgcttnnnnnnngttttgtggtattcaaaa 469  Q
    ||||||||||||||||||| | |||| ||  |||||||||||||| |||||||| ||||||||||| |||| |||       ||| ||||||||||||||    
T  58292 ttgtggtattcaatcaagactttttg-caacttaaaaaagtcttgtggtattcagtcaagactttttcatcacttaaaaaaagttctgtggtattcaaaa 58194  T
Q  470 tcattcaaatttcgaattattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaaga 559  Q
    ||||||||||||||||| |||||||||||||||||||||||          |||||||||||||| |||||||||||||| ||| | |||||||||||||    
T  58193 tcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagagaaaatctttcatgaaaaga 58094  T
Q  560 tgagatttcctgagattgtttttcttttaaaag 592  Q
    ||||||||| |||||||||||||||||||||||    
T  58093 tgagatttcttgagattgtttttcttttaaaag 58061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 93; Significance: 6e-45; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 488 - 592
Target Start/End: Original strand, 14878 - 14982
Alignment:
Q  488 attgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcctgagattgtttttctttt 587  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||    
T  14878 attgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttaagattgtttttctttt 14977  T
Q  588 aaaag 592  Q
    |||||    
T  14978 aaaag 14982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 87; Significance: 2e-41; HSPs: 3)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 371 - 510
Target Start/End: Original strand, 4191 - 4330
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||  ||       || ||||||||||||||||    
T  4191 ttgtggtattcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 4290  T
Q  471 cattcaaatttcgaattattgtttaataaattggattttg 510  Q
    ||||||||||| |||  |||||||||||||||||||||||    
T  4291 cattcaaattttgaaggattgtttaataaattggattttg 4330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 4149 - 4211
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  | || |||||||||||| |||||||||||||||||    
T  4149 ttgtggtattcaatcaagactttttgcaaattaaaaaaagtcttgtggtattcaatcaagact 4211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 4135 - 4172
Alignment:
Q  399 attttaaaaaagtcttgaggtattcaatcaagactttt 436  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  4135 attttgaaaaagtcttgtggtattcaatcaagactttt 4172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 371 - 568
Target Start/End: Original strand, 100202 - 100409
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| |||| |||||||||||| || ||| |||       || | ||||||||||||||    
T  100202 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtactcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 100301  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||| ||  ||||||||||||||          ||||||||||||| |||| ||||| ||||||||||||||||||| ||||||||||| ||    
T  100302 cattcaaatttcaaaggattgtttaataaatcaaattttgatggattttgtgggtttttctagtgaaattttaacaagaaaaagtctttcatgaaaacat 100401  T
Q  561 gagatttc 568  Q
    ||||||||    
T  100402 gagatttc 100409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 82; Significance: 2e-38; HSPs: 2)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 371 - 582
Target Start/End: Complemental strand, 15249 - 15028
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||  |||||||||||||||| || ||| |||       || | ||||||||||||||    
T  15249 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 15150  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||    
T  15149 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 15050  T
Q  561 gagatttcctgagattgttttt 582  Q
    || ||||| |  ||||||||||    
T  15049 gaaatttcttaggattgttttt 15028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 15291 - 15231
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  15291 ttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 15231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 82; Significance: 2e-38; HSPs: 2)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 371 - 582
Target Start/End: Complemental strand, 15892 - 15671
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||  |||||||||||||||| || ||| |||       || | ||||||||||||||    
T  15892 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 15793  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    |||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||    
T  15792 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 15693  T
Q  561 gagatttcctgagattgttttt 582  Q
    || ||||| |  ||||||||||    
T  15692 gaaatttcttaggattgttttt 15671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 15934 - 15874
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  15934 ttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 15874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 78; Significance: 5e-36; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 370 - 582
Target Start/End: Original strand, 102083 - 102307
Alignment:
Q  370 tttgtggtattcaatcaagattctttgtcattttaaaaa--agtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaa 467  Q
    |||||| |||||||||||||||||||||||||| |||||  ||||||| ||||||||||||||||| || ||| |||       || | |||||||||||    
T  102083 tttgtgttattcaatcaagattctttgtcatttaaaaaaagagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 102182  T
Q  468 aatcattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaa 557  Q
    ||||||||||||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||| |||||| ||||    
T  102183 aatcattcaaatttcgaaagattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaa 102282  T
Q  558 gatgagatttcctgagattgttttt 582  Q
     |||||||||| |  ||||||||||    
T  102283 tatgagatttcttatgattgttttt 102307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 72; Significance: 2e-32; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 459 - 579
Target Start/End: Complemental strand, 37035 - 36905
Alignment:
Q  459 ggtattcaaaatcattcaaatttcgaattattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtatt 548  Q
    |||||||||||||||| ||||||||||  |||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||| ||    
T  37035 ggtattcaaaatcattaaaatttcgaagcattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctt 36936  T
Q  549 tcatgaaaagatgagatttcctgagattgtt 579  Q
    |||||||||||| ||||||| ||||||||||    
T  36935 tcatgaaaagataagatttcttgagattgtt 36905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 371 - 425
Target Start/End: Complemental strand, 37081 - 37027
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaa 425  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  37081 ttgtgctattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 37027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 371 - 566
Target Start/End: Complemental strand, 39111 - 38906
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||||||||||||||||||||||| |||||| |||||||||||| |||||||||| |||||| || ||| |||       || | ||| ||||||||||    
T  39111 ttgtggtattcaatcaagattctttatcatttaaaaaaagtcttgtggtattcaataaagactcttaatcacttaaaagaagtctagtgatattcaaaat 39012  T
Q  471 cattcaaatttcgaattattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 560  Q
    ||||||||||| |||  ||||||||||||||          |||||||||||||||||| ||||| ||||||  || |||||||| ||||||||||| ||    
T  39011 cattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacat 38912  T
Q  561 gagatt 566  Q
    ||||||    
T  38911 gagatt 38906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 63; Significance: 5e-27; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 502 - 592
Target Start/End: Complemental strand, 3767 - 3677
Alignment:
Q  502 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcctgagattgtttttcttttaaaag 592  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||| | ||||  |||||||||||||||||||||||    
T  3767 tggattttgtgggattttgtagtgtaattttaacaagaaaaggtctttcataaaaagattatattttttgagattgtttttcttttaaaag 3677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 405 - 582
Target Start/End: Complemental strand, 38786 - 38600
Alignment:
Q  405 aaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaatcattcaaatttcgaattattgtttaataa----a 500  Q
    ||||||||||| ||||||||||||||||| || ||| |||       || | |||||||||||||||||||||||||||||  ||||||||||||    |    
T  38786 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataatcaga 38687  T
Q  501 tt-----ggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcctgagattgttttt 582  Q
    ||     ||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| |||||||||| |  ||||||||||    
T  38686 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 38600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 58; Significance: 4e-24; HSPs: 2)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 371 - 501
Target Start/End: Complemental strand, 755 - 625
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttnnnnnnngttttgtggtattcaaaat 470  Q
    ||||| |||||||||||||||||||||||||| |||||||| ||| ||||||||||||| ||| || ||| |||        ||| ||||||||||||||    
T  755 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtattgtggtattcaatcaaaactcttaatcacttaaattttttttagtggtattcaaaat 656  T
Q  471 cattcaaatttcgaattattgtttaataaat 501  Q
    ||||||||||| |||  ||||||||||||||    
T  655 cattcaaatttggaaggattgtttaataaat 625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 797 - 737
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaga 431  Q
    ||||||||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  797 ttgtggtattcaatcaagactctttacaatttaaaaaaagtcttgtgttattcaatcaaga 737  T

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Target: scaffold0021 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 261 - 349
Target Start/End: Original strand, 107689 - 107776
Alignment:
Q  261 acaaaattttagggtgaggggatggtgccccaatctaaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    ||||||||||||| |||||||||||||||||| || |||| | || ||| |||||||||||||||||| ||||||||||||||||||||    
T  107689 acaaaattttagg-tgaggggatggtgccccagtccaaggcagggtagaccttcgggctcaaagagcacttacaaaggtaattacattt 107776  T

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Target: scaffold0010 (Bit Score: 52; Significance: 2e-20; HSPs: 5)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 371 - 438
Target Start/End: Original strand, 233728 - 233795
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttca 438  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||| ||||||||    
T  233728 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttaaggtcttcaatcaaaacttttca 233795  T

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Target: scaffold0010; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 371 - 438
Target Start/End: Original strand, 234576 - 234643
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttca 438  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||| ||||||||    
T  234576 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttaaggtcttcaatcaaaacttttca 234643  T

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Target: scaffold0010; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 371 - 438
Target Start/End: Original strand, 222560 - 222627
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttca 438  Q
    ||||||||||||||||| | |||||||||||||||||||||||| |||| ||||||||| ||||||||    
T  222560 ttgtggtattcaatcaaaactctttgtcattttaaaaaagtcttaaggtcttcaatcaaaacttttca 222627  T

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Target: scaffold0010; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 233686 - 233748
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  | ||  ||||||||||| |||||||||||||||||    
T  233686 ttgtggtattcaatcaagactttttgcaacttagaaaaagtcttgtggtattcaatcaagact 233748  T

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Target: scaffold0010; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 234534 - 234596
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagact 433  Q
    ||||||||||||||||||| | ||||  | ||  ||||||||||| |||||||||||||||||    
T  234534 ttgtggtattcaatcaagactttttgcaacttagaaaaagtcttgtggtattcaatcaagact 234596  T

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Target: scaffold0691 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0691
Description:

Target: scaffold0691; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 297 - 349
Target Start/End: Original strand, 7002 - 7054
Alignment:
Q  297 aaggtaaggaagatcttcgggctcaaagagcatttacaaaggtaattacattt 349  Q
    |||||| |||||| |||||| |||||||| || || |||||||||||||||||    
T  7002 aaggtagggaagaccttcggactcaaagaacacttgcaaaggtaattacattt 7054  T

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Target: scaffold0651 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 371 - 411
Target Start/End: Original strand, 8753 - 8793
Alignment:
Q  371 ttgtggtattcaatcaagattctttgtcattttaaaaaagt 411  Q
    ||||| |||| ||||||||||||||||||||| ||||||||    
T  8753 ttgtgttatttaatcaagattctttgtcatttaaaaaaagt 8793  T

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