View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4814-Insertion-5 (Length: 492)

Name: NF4814-Insertion-5
Description: NF4814
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4814-Insertion-5
NF4814-Insertion-5
[»] chr1 (35 HSPs)
chr1 (8-492)||(34654109-34654594)
chr1 (361-490)||(39709467-39709596)
chr1 (153-286)||(51217688-51217821)
chr1 (361-492)||(615268-615398)
chr1 (361-492)||(34117583-34117702)
chr1 (414-492)||(25791202-25791280)
chr1 (231-363)||(37624561-37624692)
chr1 (232-362)||(30551581-30551710)
chr1 (231-319)||(51218957-51219045)
chr1 (239-306)||(35683105-35683172)
chr1 (179-252)||(40533540-40533613)
chr1 (231-319)||(23082117-23082205)
chr1 (231-299)||(27689340-27689408)
chr1 (239-306)||(2237977-2238044)
chr1 (239-306)||(48935109-48935176)
chr1 (207-285)||(9417064-9417142)
chr1 (239-289)||(25889491-25889541)
chr1 (239-289)||(35684202-35684252)
chr1 (230-306)||(1061442-1061518)
chr1 (157-253)||(50679738-50679834)
chr1 (239-306)||(2236863-2236930)
chr1 (443-490)||(32947228-32947275)
chr1 (178-253)||(40110590-40110665)
chr1 (231-316)||(9415664-9415749)
chr1 (241-306)||(34531713-34531778)
chr1 (391-439)||(26237085-26237133)
chr1 (248-291)||(1873002-1873045)
chr1 (157-220)||(14765012-14765075)
chr1 (231-306)||(44977271-44977346)
chr1 (231-305)||(29001113-29001187)
chr1 (158-220)||(45571556-45571618)
chr1 (157-254)||(13929397-13929494)
chr1 (165-250)||(26803141-26803226)
chr1 (178-242)||(24516448-24516512)
chr1 (178-246)||(26287711-26287778)
[»] chr5 (42 HSPs)
chr5 (361-489)||(7767496-7767624)
chr5 (361-485)||(27170583-27170707)
chr5 (361-488)||(1377754-1377881)
chr5 (361-492)||(6030789-6030919)
chr5 (361-492)||(26656257-26656387)
chr5 (361-492)||(26927844-26927974)
chr5 (361-489)||(21600723-21600839)
chr5 (363-492)||(6989365-6989482)
chr5 (361-492)||(1157686-1157805)
chr5 (391-490)||(25444511-25444611)
chr5 (411-492)||(7271389-7271466)
chr5 (414-489)||(18696576-18696651)
chr5 (166-283)||(14212117-14212234)
chr5 (198-306)||(41905225-41905333)
chr5 (414-489)||(38958610-38958685)
chr5 (442-492)||(41355971-41356021)
chr5 (157-253)||(18695564-18695660)
chr5 (157-253)||(21389060-21389156)
chr5 (182-253)||(8188142-8188213)
chr5 (239-306)||(15509245-15509312)
chr5 (239-306)||(15510262-15510329)
chr5 (182-307)||(1273138-1273263)
chr5 (153-254)||(10736848-10736949)
chr5 (239-306)||(20991648-20991715)
chr5 (239-306)||(22650627-22650694)
chr5 (363-406)||(41356053-41356096)
chr5 (178-246)||(9219289-9219357)
chr5 (190-254)||(15857568-15857632)
chr5 (174-226)||(33431882-33431934)
chr5 (239-306)||(4567001-4567068)
chr5 (239-306)||(4567973-4568040)
chr5 (182-253)||(5975859-5975930)
chr5 (239-306)||(20988740-20988807)
chr5 (231-306)||(21387687-21387762)
chr5 (355-406)||(38958681-38958731)
chr5 (192-254)||(5384298-5384360)
chr5 (361-403)||(7270182-7270224)
chr5 (182-254)||(22812328-22812401)
chr5 (442-491)||(27632522-27632571)
chr5 (158-307)||(32735397-32735546)
chr5 (442-491)||(36608195-36608244)
chr5 (231-307)||(18693747-18693823)
[»] chr6 (17 HSPs)
chr6 (361-492)||(21880943-21881074)
chr6 (365-490)||(3524022-3524147)
chr6 (361-490)||(34213852-34213981)
chr6 (157-302)||(18773708-18773853)
chr6 (445-489)||(20740212-20740256)
chr6 (239-306)||(8447271-8447338)
chr6 (239-306)||(8456075-8456142)
chr6 (436-489)||(34503274-34503327)
chr6 (239-306)||(2138636-2138703)
chr6 (239-306)||(19368517-19368584)
chr6 (179-242)||(30232842-30232905)
chr6 (444-486)||(14287382-14287424)
chr6 (178-251)||(18242245-18242318)
chr6 (445-490)||(22696261-22696306)
chr6 (179-255)||(138142-138218)
chr6 (179-255)||(146163-146239)
chr6 (446-490)||(11444784-11444828)
[»] chr2 (36 HSPs)
chr2 (362-492)||(17374841-17374970)
chr2 (157-317)||(4830592-4830752)
chr2 (381-492)||(4869176-4869286)
chr2 (157-282)||(26205964-26206089)
chr2 (372-487)||(34659789-34659904)
chr2 (157-306)||(4513670-4513819)
chr2 (414-486)||(3921172-3921244)
chr2 (172-307)||(15850161-15850296)
chr2 (157-279)||(14716112-14716234)
chr2 (415-488)||(1894984-1895057)
chr2 (231-307)||(26205062-26205138)
chr2 (414-485)||(1552060-1552131)
chr2 (239-306)||(2305590-2305657)
chr2 (231-318)||(41296445-41296532)
chr2 (442-486)||(3257982-3258026)
chr2 (243-306)||(3665274-3665337)
chr2 (231-306)||(4512156-4512231)
chr2 (239-289)||(2306660-2306710)
chr2 (361-492)||(17282405-17282523)
chr2 (200-265)||(8538584-8538649)
chr2 (231-299)||(14714549-14714617)
chr2 (182-254)||(40174707-40174778)
chr2 (383-426)||(11163571-11163614)
chr2 (239-306)||(33836819-33836886)
chr2 (239-289)||(41312567-41312617)
chr2 (182-255)||(1147853-1147926)
chr2 (81-122)||(24476661-24476701)
chr2 (239-306)||(3666267-3666334)
chr2 (239-289)||(3254923-3254973)
chr2 (444-490)||(5051106-5051152)
chr2 (179-245)||(19397644-19397710)
chr2 (332-366)||(23177664-23177698)
chr2 (332-366)||(23588921-23588955)
chr2 (361-406)||(1552127-1552172)
chr2 (157-221)||(10368302-10368366)
chr2 (231-307)||(14509258-14509334)
[»] chr8 (44 HSPs)
chr8 (81-319)||(16362456-16362697)
chr8 (373-488)||(10408363-10408478)
chr8 (379-486)||(5994154-5994261)
chr8 (153-299)||(44102006-44102152)
chr8 (158-306)||(13514783-13514931)
chr8 (158-306)||(13604316-13604464)
chr8 (156-306)||(39323837-39323987)
chr8 (361-492)||(20860822-20860960)
chr8 (164-254)||(40251280-40251370)
chr8 (164-254)||(37274989-37275079)
chr8 (165-306)||(38035-38175)
chr8 (403-462)||(6443585-6443644)
chr8 (231-306)||(21670114-21670189)
chr8 (231-299)||(13363569-13363637)
chr8 (158-254)||(36939951-36940047)
chr8 (178-253)||(7770100-7770175)
chr8 (178-253)||(7777777-7777852)
chr8 (239-306)||(13513470-13513537)
chr8 (239-306)||(13603003-13603070)
chr8 (231-306)||(44103287-44103362)
chr8 (179-252)||(42793806-42793879)
chr8 (231-299)||(21961880-21961948)
chr8 (178-250)||(39516435-39516507)
chr8 (231-306)||(39325825-39325900)
chr8 (172-299)||(44607248-44607375)
chr8 (233-307)||(10053737-10053811)
chr8 (157-254)||(37473953-37474050)
chr8 (178-253)||(7795869-7795945)
chr8 (231-307)||(13367041-13367117)
chr8 (157-221)||(21671264-21671328)
chr8 (186-250)||(36757166-36757230)
chr8 (179-254)||(8397197-8397272)
chr8 (231-286)||(10052174-10052229)
chr8 (178-253)||(22621072-22621147)
chr8 (391-429)||(13995294-13995332)
chr8 (444-490)||(19411636-19411682)
chr8 (332-362)||(29739734-29739764)
chr8 (332-366)||(37323339-37323373)
chr8 (177-255)||(45395952-45396030)
chr8 (445-490)||(19554753-19554798)
chr8 (178-253)||(7815146-7815222)
chr8 (190-254)||(34616236-34616300)
chr8 (332-364)||(41868007-41868039)
chr8 (178-254)||(43203215-43203291)
[»] chr7 (36 HSPs)
chr7 (361-492)||(3301954-3302085)
chr7 (379-490)||(1778124-1778235)
chr7 (361-462)||(39020680-39020781)
chr7 (414-492)||(11698809-11698887)
chr7 (164-289)||(13446582-13446707)
chr7 (164-307)||(35483623-35483766)
chr7 (235-306)||(41126289-41126360)
chr7 (182-253)||(41515099-41515170)
chr7 (182-253)||(28326332-28326403)
chr7 (239-306)||(30223975-30224042)
chr7 (239-306)||(36673835-36673902)
chr7 (435-489)||(29550171-29550225)
chr7 (239-289)||(30222713-30222763)
chr7 (165-250)||(45721691-45721776)
chr7 (231-307)||(24495042-24495118)
chr7 (159-306)||(43111479-43111630)
chr7 (442-485)||(47588741-47588784)
chr7 (231-305)||(18668814-18668888)
chr7 (239-289)||(34558300-34558350)
chr7 (239-289)||(41618498-41618548)
chr7 (207-285)||(44114623-44114701)
chr7 (168-209)||(24494125-24494166)
chr7 (182-247)||(35296757-35296822)
chr7 (445-490)||(40074601-40074646)
chr7 (178-246)||(17288180-17288248)
chr7 (179-255)||(26146643-26146719)
chr7 (361-405)||(29550122-29550166)
chr7 (442-490)||(36933950-36933998)
chr7 (231-307)||(44113478-44113554)
chr7 (231-307)||(49162286-49162362)
chr7 (239-306)||(2904046-2904113)
chr7 (182-245)||(32653577-32653640)
chr7 (239-306)||(33341348-33341415)
chr7 (182-243)||(25532257-25532318)
chr7 (442-490)||(5893246-5893294)
chr7 (239-291)||(7345979-7346031)
[»] scaffold0005 (2 HSPs)
scaffold0005 (367-492)||(250805-250930)
scaffold0005 (442-487)||(47736-47781)
[»] chr4 (43 HSPs)
chr4 (367-492)||(14566445-14566570)
chr4 (363-492)||(23054737-23054866)
chr4 (153-286)||(2292220-2292353)
chr4 (394-479)||(6409574-6409659)
chr4 (157-275)||(43895534-43895652)
chr4 (361-492)||(53201789-53201910)
chr4 (231-306)||(36604832-36604907)
chr4 (361-492)||(34227459-34227578)
chr4 (158-307)||(43418082-43418231)
chr4 (230-306)||(2293515-2293591)
chr4 (394-490)||(19657905-19658001)
chr4 (178-306)||(46795964-46796092)
chr4 (363-471)||(31360549-31360645)
chr4 (414-492)||(47518917-47518995)
chr4 (442-487)||(14791950-14791995)
chr4 (445-489)||(50589289-50589333)
chr4 (178-253)||(47667281-47667356)
chr4 (233-307)||(29686305-29686379)
chr4 (178-247)||(29665512-29665581)
chr4 (81-122)||(33296484-33296525)
chr4 (239-306)||(2310781-2310848)
chr4 (223-306)||(36604490-36604573)
chr4 (157-252)||(38417657-38417752)
chr4 (329-371)||(27410769-27410811)
chr4 (178-251)||(3528295-3528368)
chr4 (394-427)||(24958109-24958142)
chr4 (244-289)||(30672068-30672113)
chr4 (229-306)||(52880864-52880941)
chr4 (239-302)||(29833426-29833489)
chr4 (178-253)||(41348342-41348417)
chr4 (178-253)||(56001207-56001281)
chr4 (240-306)||(18358373-18358439)
chr4 (239-289)||(19048942-19048992)
chr4 (442-492)||(24958055-24958105)
chr4 (392-430)||(26677293-26677331)
chr4 (239-289)||(29834431-29834481)
chr4 (157-307)||(34439577-34439727)
chr4 (231-305)||(44655772-44655846)
chr4 (182-247)||(52137538-52137603)
chr4 (239-307)||(936265-936333)
chr4 (442-490)||(12887997-12888045)
chr4 (231-307)||(17494176-17494252)
chr4 (445-489)||(28149606-28149650)
[»] scaffold0046 (1 HSPs)
scaffold0046 (157-294)||(24732-24869)
[»] chr3 (38 HSPs)
chr3 (361-492)||(18270177-18270307)
chr3 (361-487)||(893410-893536)
chr3 (362-466)||(43275477-43275581)
chr3 (8-79)||(15259-15330)
chr3 (157-289)||(17345378-17345509)
chr3 (361-470)||(3576801-3576909)
chr3 (157-306)||(26797369-26797518)
chr3 (391-490)||(14993528-14993627)
chr3 (231-306)||(7483516-7483591)
chr3 (167-286)||(7921570-7921689)
chr3 (231-306)||(17350093-17350168)
chr3 (164-254)||(32980376-32980466)
chr3 (442-490)||(25498552-25498600)
chr3 (239-306)||(32973189-32973256)
chr3 (239-306)||(32974222-32974289)
chr3 (231-306)||(39133067-39133142)
chr3 (239-306)||(48035323-48035390)
chr3 (239-306)||(52293522-52293589)
chr3 (239-306)||(53047947-53048014)
chr3 (239-306)||(53049036-53049103)
chr3 (391-491)||(27741608-27741708)
chr3 (178-251)||(47766889-47766962)
chr3 (442-490)||(17113970-17114018)
chr3 (247-306)||(1301082-1301141)
chr3 (239-306)||(39287520-39287587)
chr3 (231-306)||(40501858-40501933)
chr3 (239-289)||(11481968-11482018)
chr3 (178-247)||(48253042-48253111)
chr3 (182-246)||(8372558-8372622)
chr3 (239-306)||(5416248-5416315)
chr3 (239-306)||(7583520-7583587)
chr3 (231-306)||(25583164-25583239)
chr3 (239-289)||(7821985-7822035)
chr3 (178-251)||(7271529-7271602)
chr3 (165-246)||(10339914-10339995)
chr3 (182-247)||(14744175-14744240)
chr3 (157-254)||(19252919-19253016)
chr3 (336-364)||(26799001-26799029)
[»] scaffold0084 (1 HSPs)
scaffold0084 (157-294)||(11768-11905)
[»] scaffold0009 (1 HSPs)
scaffold0009 (404-490)||(54030-54117)
[»] scaffold0177 (1 HSPs)
scaffold0177 (239-289)||(1822-1872)
[»] scaffold0015 (2 HSPs)
scaffold0015 (231-299)||(207789-207857)
scaffold0015 (445-490)||(79521-79566)
[»] scaffold0002 (1 HSPs)
scaffold0002 (239-291)||(458459-458511)
[»] scaffold0024 (1 HSPs)
scaffold0024 (233-286)||(72979-73032)
[»] scaffold0098 (1 HSPs)
scaffold0098 (172-254)||(42278-42360)
[»] scaffold0051 (1 HSPs)
scaffold0051 (164-254)||(22229-22318)
[»] scaffold0114 (1 HSPs)
scaffold0114 (182-255)||(38644-38717)
[»] scaffold0687 (1 HSPs)
scaffold0687 (178-253)||(6501-6577)
[»] scaffold0290 (1 HSPs)
scaffold0290 (164-252)||(8483-8571)


Alignment Details
Target: chr1 (Bit Score: 353; Significance: 0; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 353; E-Value: 0
Query Start/End: Original strand, 8 - 492
Target Start/End: Original strand, 34654109 - 34654594
Alignment:
Q  8 ttcttcatatctgattatcttattccatacggctgttttaaaagttgaattggagatttaaccagcaataaggatatgaacttaatgattaaaatgatga 107  Q
    ||||||| |||||||||||||||| |||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34654109 ttcttcagatctgattatcttatttcatatggttgttttaaatgttgaattggagatttaaccagcaataaggatatgaacttaatgattaaaatgatga 34654208  T
Q  108 agattaagaggaagagggagggagaagaagataaggnnnnnnnnnttaagtgttgttggttcattgttgtatacaatggacatgcaattgaatggttgaa 207  Q
    ||||||||||||||||||||||||||||||||||||         | | |||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  34654209 agattaagaggaagagggagggagaagaagataaggaaaaaaaact-atgtgttgttggttcattgttgtatacaatggacctgcaatcgaatggttgaa 34654307  T
Q  208 atcatataaaaaattttagtcatttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagttaa 307  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  34654308 atcatattaaaaatattagtcatttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagagaccaaattgaaacgttttatagttaa 34654407  T
Q  308 tgtaccattttgnnnnnnnn--taattaaattaagagaccaaatgatgtattaagccaaaacaaaactaacatcacgatcaacgaaacaacataaacaaa 405  Q
     |||||||||||          ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  34654408 ggtaccattttgaaaaaaataataattaaattaagggaccaaatgatgtattaagccaaaacaaagctaacatcacgatcaacgaaacaacataaacaaa 34654507  T
Q  406 agttgtaccaaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccaccacccacattccgctgctcgcacacaacccctg 492  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34654508 agttgtaccaaaatcctcaaacatcgtcgcaactgtcacaaaaacaacttccaccacccacattccgctgctcgcacacaacccctg 34654594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 361 - 490
Target Start/End: Complemental strand, 39709596 - 39709467
Alignment:
Q  361 ccaaaacaaaactaacatcacgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccacc 460  Q
    |||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||  |||||||||||||| ||||    
T  39709596 ccaaaacaaagctaacaccacgatcaacgaaacaacaaaaacaaaagttgtaccaaaatcctcaaacatcgccacaactgccacaaaaacaactttcacc 39709497  T
Q  461 acccacattccgctgctcgcacacaacccc 490  Q
    |||||||||| |||||||||||||||||||    
T  39709496 acccacattctgctgctcgcacacaacccc 39709467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 153 - 286
Target Start/End: Complemental strand, 51217821 - 51217688
Alignment:
Q  153 ttaagtgttgttggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggacc 252  Q
    |||||||||| ||| ||||||||||| ||||| ||||||||||  |||||||||||| |||| |||||| ||||||||| ||||| ||||||||||||||    
T  51217821 ttaagtgttgatggctcattgttgtacacaatagacatgcaatctaatggttgaaattatatcaaaaatattagtcattaaaaaactaacggagaggacc 51217722  T
Q  253 aatagaggtaacggtagaagacataagggaccaa 286  Q
    || ||||||||||| |||||||||||||||||||    
T  51217721 aagagaggtaacggaagaagacataagggaccaa 51217688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 361 - 492
Target Start/End: Original strand, 615268 - 615398
Alignment:
Q  361 ccaaaacaaaactaacatcacgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccacc 460  Q
    ||||||| || |||||| |||||||||| |||||||||||||| | | ||||||||||||||||||| ||||| |||| | |||||||||||||| ||||    
T  615268 ccaaaaccaagctaacagcacgatcaacaaaacaacataaacatatggtgtaccaaaatcctcaaacgtcgtcacaac-accacaaaaacaactttcacc 615366  T
Q  461 acccacattccgctgctcgcacacaacccctg 492  Q
     |||| |||||| |||||||||||||||||||    
T  615367 gcccatattccgttgctcgcacacaacccctg 615398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 361 - 492
Target Start/End: Original strand, 34117583 - 34117702
Alignment:
Q  361 ccaaaacaaaactaacatcacgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccacc 460  Q
    |||||||||| |||||| |||||||||||||||||||||||||||            |||||||| |||||| ||||||  |||||||||||||||||||    
T  34117583 ccaaaacaaagctaacaccacgatcaacgaaacaacataaacaaa------------atcctcaagcatcgttgcaactgccacaaaaacaacttccacc 34117670  T
Q  461 acccacattccgctgctcgcacacaacccctg 492  Q
    ||||||||||||||||||||||||||||||||    
T  34117671 acccacattccgctgctcgcacacaacccctg 34117702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 414 - 492
Target Start/End: Original strand, 25791202 - 25791280
Alignment:
Q  414 caaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccaccacccacattccgctgctcgcacacaacccctg 492  Q
    |||||||||||| ||||||| ||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  25791202 caaaatcctcaagcatcgtcacaactgtcacaaaaacaacttctaccacccacattccgctgcttgcacacaacccctg 25791280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 231 - 363
Target Start/End: Original strand, 37624561 - 37624692
Alignment:
Q  231 ttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagttaatgtaccattttgnnnnnnnntaa 330  Q
    ||||||| |||||||||||||||| ||| ||||||  |||| |||||| |||||||||| ||||||||| ||||||| | |||||||||        |||    
T  37624561 ttaaaaactaacggagaggaccaaaagatgtaacgacagaaaacataacggaccaaattgaaacgttttttagttaagggaccattttg-aaaaaaataa 37624659  T
Q  331 ttaaattaagagaccaaatgatgtattaagcca 363  Q
    |||||||||| ||| ||||||||||||||||||    
T  37624660 ttaaattaagggactaaatgatgtattaagcca 37624692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 232 - 362
Target Start/End: Original strand, 30551581 - 30551710
Alignment:
Q  232 taaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagttaatgtaccattttgnnnnnnnntaat 331  Q
    |||||| ||||||||| |||||| |||||||||| ||||| ||||||||||||||||| ||| ||||| ||||||| | |||||||||         |||    
T  30551581 taaaaactaacggagatgaccaaaagaggtaacgatagaaaacataagggaccaaattgaaatgttttttagttaagggaccattttgaaaaaaag-aat 30551679  T
Q  332 taaattaagagaccaaatgatgtattaagcc 362  Q
    ||||||||| ||| |||||||||||||||||    
T  30551680 taaattaagggactaaatgatgtattaagcc 30551710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 231 - 319
Target Start/End: Original strand, 51218957 - 51219045
Alignment:
Q  231 ttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagttaatgtaccattttg 319  Q
    ||||||| ||||||||||||||||| ||| |||||| ||||||||||||||||||| || | ||||||| ||||||  | |||||||||    
T  51218957 ttaaaaactaacggagaggaccaattgagttaacggaagaagacataagggaccaatttgagacgttttttagttaggggaccattttg 51219045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 35683172 - 35683105
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||| | ||  ||||||||||    
T  35683172 taacggagaggaccaaaagaggtaacggcagaagacataagggaccaaattgagacactttatagtta 35683105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 40533540 - 40533613
Alignment:
Q  179 tacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggacc 252  Q
    |||||||||||||||||  ||||||| ||||||||| |||| |||||| |||| |||||||||||||| |||||    
T  40533540 tacaatggacatgcaatccaatggttaaaatcatatcaaaagttttagacattaaaaaattaacggaggggacc 40533613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 231 - 319
Target Start/End: Original strand, 23082117 - 23082205
Alignment:
Q  231 ttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagttaatgtaccattttg 319  Q
    ||||||| ||||||| |||||||| ||||| ||||  |||| | ||||||||||||||| ||||||||| ||||||| | |||||||||    
T  23082117 ttaaaaactaacggaaaggaccaaaagaggcaacgacagaaaatataagggaccaaattgaaacgttttttagttaagggaccattttg 23082205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 231 - 299
Target Start/End: Complemental strand, 27689408 - 27689340
Alignment:
Q  231 ttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgtttt 299  Q
    ||||||| |||||||||||||||| ||||||||||  |||| ||||||| ||||||||| |||||||||    
T  27689408 ttaaaaactaacggagaggaccaaaagaggtaacgacagaaaacataagagaccaaattgaaacgtttt 27689340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 2237977 - 2238044
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    |||||||||||||||| ||||||||||  |||||||||||||||||||||| | ||  ||||||||||    
T  2237977 taacggagaggaccaaaagaggtaacgacagaagacataagggaccaaattgagacactttatagtta 2238044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 48935109 - 48935176
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    ||||||||| |||||| ||||||||||| |||||||||||||||||||||| | ||  ||||||||||    
T  48935109 taacggagatgaccaaaagaggtaacggcagaagacataagggaccaaattgagacactttatagtta 48935176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 207 - 285
Target Start/End: Original strand, 9417064 - 9417142
Alignment:
Q  207 aatcatataaaaaattttagtcatttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggacca 285  Q
    |||||||| |||||| |||  |||| ||||| |||||||||||||  | |||||| |||||||||||||||||||||||    
T  9417064 aatcatattaaaaatattatacattaaaaaactaacggagaggactgaaagaggtgacggtagaagacataagggacca 9417142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 239 - 289
Target Start/End: Original strand, 25889491 - 25889541
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaatt 289  Q
    |||||||||||||||| ||||||||||| |||||||||||| |||||||||    
T  25889491 taacggagaggaccaaaagaggtaacggaagaagacataagtgaccaaatt 25889541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 239 - 289
Target Start/End: Original strand, 35684202 - 35684252
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaatt 289  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||||||||    
T  35684202 taacggagaggaccaaaagaggtaacgacagaagacataagggaccaaatt 35684252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 230 - 306
Target Start/End: Original strand, 1061442 - 1061518
Alignment:
Q  230 tttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    |||||||  ||||||| |||||||| ||||||||||| | |||||||||| ||||||||||| ||  ||||||||||    
T  1061442 tttaaaatgtaacggataggaccaaaagaggtaacggcaaaagacataagtgaccaaattaagacactttatagtta 1061518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 253
Target Start/End: Original strand, 50679738 - 50679834
Alignment:
Q  157 gtgttgttggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggacca 253  Q
    |||||| | ||||| |||||||||||||| || | ||||  || |||||||| ||||| ||||| ||||| |||| ||||| |||||||||||||||    
T  50679738 gtgttgatagttcagtgttgtatacaatgaacctacaatcaaacggttgaaaacatatcaaaaaatttagacattaaaaaactaacggagaggacca 50679834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 2236930 - 2236863
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    |||||||||||| ||| ||||||||||  |||||||||||||||||||||| | ||  ||||||||||    
T  2236930 taacggagaggatcaaaagaggtaacgacagaagacataagggaccaaattgagacactttatagtta 2236863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 443 - 490
Target Start/End: Complemental strand, 32947275 - 32947228
Alignment:
Q  443 acaaaaacaacttccaccacccacattccgctgctcgcacacaacccc 490  Q
    ||||||||||||||||||| | |||| |||||||||||||||||||||    
T  32947275 acaaaaacaacttccaccatctacatcccgctgctcgcacacaacccc 32947228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 178 - 253
Target Start/End: Original strand, 40110590 - 40110665
Alignment:
Q  178 atacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggacca 253  Q
    ||||||||||||||||||  ||||||| ||||||||| || |||||||  |||| ||||| |||| ||||||||||    
T  40110590 atacaatggacatgcaatcaaatggttaaaatcatatcaataattttatacattaaaaaactaacagagaggacca 40110665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 316
Target Start/End: Complemental strand, 9415749 - 9415664
Alignment:
Q  231 ttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagttaatgtaccatt 316  Q
    ||||||| ||||| || ||||||| | ||||||||| | || |||||||||||||| |||| ||||||| ||||||| | ||||||    
T  9415749 ttaaaaactaacgaagtggaccaaaataggtaacggcataatacataagggaccaatttaagacgttttttagttaagggaccatt 9415664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 241 - 306
Target Start/End: Complemental strand, 34531778 - 34531713
Alignment:
Q  241 acggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    |||||||||||||| |||| |||||  |||||||||||| ||||||||| | || |||||||||||    
T  34531778 acggagaggaccaaaagagataacgacagaagacataagagaccaaattgagacattttatagtta 34531713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 391 - 439
Target Start/End: Complemental strand, 26237133 - 26237085
Alignment:
Q  391 aacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaact 439  Q
    ||||| |||||||||||||||||||||||| ||||||||| || |||||    
T  26237133 aacaaaataaacaaaagttgtaccaaaatcttcaaacatcatcacaact 26237085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 291
Target Start/End: Complemental strand, 1873045 - 1873002
Alignment:
Q  248 ggaccaatagaggtaacggtagaagacataagggaccaaattaa 291  Q
    ||||||| ||||||||||| | ||||||||||||||||||||||    
T  1873045 ggaccaaaagaggtaacggcaaaagacataagggaccaaattaa 1873002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 14765012 - 14765075
Alignment:
Q  157 gtgttgttggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaa 220  Q
    |||||| ||| ||| ||||||||||||||||| ||||||  || |||||||||||||| |||||    
T  14765012 gtgttgatgggtcagtgttgtatacaatggacctgcaatcaaaaggttgaaatcatatcaaaaa 14765075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 306
Target Start/End: Complemental strand, 44977346 - 44977271
Alignment:
Q  231 ttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    ||||||| |||| |||| ||||||  |||||||||| ||||||||||||||||||  |||| ||  ||||||||||    
T  44977346 ttaaaaactaacagagatgaccaaatgaggtaacggcagaagacataagggaccagtttaagacactttatagtta 44977271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 305
Target Start/End: Original strand, 29001113 - 29001187
Alignment:
Q  231 ttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtt 305  Q
    ||||||||||||||| |||||||| | | ||||||  |||| |||||||||||||| || | |||||||| ||||    
T  29001113 ttaaaaattaacggaaaggaccaagataagtaacgacagaatacataagggaccaatttgagacgttttaaagtt 29001187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 45571556 - 45571618
Alignment:
Q  158 tgttgttggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaa 220  Q
    ||||| ||||||| ||||||||||||||||| | ||||  || ||||||||||| ||||||||    
T  45571556 tgttggtggttcaatgttgtatacaatggacttacaatcaaacggttgaaatcaaataaaaaa 45571618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 254
Target Start/End: Complemental strand, 13929494 - 13929397
Alignment:
Q  157 gtgttgttggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaa 254  Q
    |||||| ||| ||| ||| ||||||||||||| ||| || |||||||  |||  |||| |||||| |||| |||| |||||| |||||| ||||||||    
T  13929494 gtgttggtggctcaatgtggtatacaatggacctgccatcgaatggtcaaaacaatatcaaaaatattagacattaaaaaataaacggacaggaccaa 13929397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 26803141 - 26803226
Alignment:
Q  165 ggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagagga 250  Q
    |||||| ||||  ||||||||||||||||||  ||||||| ||||||||| || |||||||  |||| ||| | |||| |||||||    
T  26803141 ggttcactgttaaatacaatggacatgcaatcaaatggttaaaatcatatcaagaattttatacattaaaatactaacagagagga 26803226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 242
Target Start/End: Complemental strand, 24516512 - 24516448
Alignment:
Q  178 atacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaac 242  Q
    ||||||||||||||||||  ||||||| ||||||||| || |||||||  |||| ||||| ||||    
T  24516512 atacaatggacatgcaatcaaatggttaaaatcatatcaagaattttatacattaaaaaactaac 24516448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 246
Target Start/End: Original strand, 26287711 - 26287778
Alignment:
Q  178 atacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggag 246  Q
    ||||| ||||||| ||||  ||||||| |||||| |||||||| ||||| |||| ||||||||||||||    
T  26287711 atacattggacatacaatcaaatggttaaaatcaaataaaaaa-tttagacattaaaaaattaacggag 26287778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 3e-52; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 361 - 489
Target Start/End: Complemental strand, 7767624 - 7767496
Alignment:
Q  361 ccaaaacaaaactaacatcacgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccacc 460  Q
    |||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  7767624 ccaaaacaaagctaacaccacgatcaacggaacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaactgccacaaaaacaacttccacc 7767525  T
Q  461 acccacattccgctgctcgcacacaaccc 489  Q
    ||||||||| |||||||||||||||||||    
T  7767524 acccacatttcgctgctcgcacacaaccc 7767496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 361 - 485
Target Start/End: Complemental strand, 27170707 - 27170583
Alignment:
Q  361 ccaaaacaaaactaacatcacgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccacc 460  Q
    |||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||| ||||||||||    
T  27170707 ccaaaacaaagctaacaccacgatcaatgaaacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcacaactgccacaaaaataacttccacc 27170608  T
Q  461 acccacattccgctgctcgcacaca 485  Q
    ||||||||||| || ||||||||||    
T  27170607 acccacattccactactcgcacaca 27170583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 361 - 488
Target Start/End: Original strand, 1377754 - 1377881
Alignment:
Q  361 ccaaaacaaaactaacatcacgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccacc 460  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||| ||| |||||||| ||||||||||||||||  ||||||||||| ||||||     
T  1377754 ccaaaacaaaactaacaccacgatcaacgaaacaacataatcaaaagttatacaaaaatccttaaacatcgtcgcaactgccacaaaaacaatttccact 1377853  T
Q  461 acccacattccgctgctcgcacacaacc 488  Q
       |||||||||||||||||||||||||    
T  1377854 tttcacattccgctgctcgcacacaacc 1377881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 361 - 492
Target Start/End: Complemental strand, 6030919 - 6030789
Alignment:
Q  361 ccaaaacaaaactaacatcacgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccacc 460  Q
    ||||||| || |||||| ||||||||||||||||||||||||| | || |||||||||||||||||||||||| |||| | |||||||||||||| ||||    
T  6030919 ccaaaaccaatctaacagcacgatcaacgaaacaacataaacatatgtggtaccaaaatcctcaaacatcgtcacaac-accacaaaaacaactttcacc 6030821  T
Q  461 acccacattccgctgctcgcacacaacccctg 492  Q
    | ||| ||||||||||||||||| ||||||||    
T  6030820 atccatattccgctgctcgcacaaaacccctg 6030789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 361 - 492
Target Start/End: Original strand, 26656257 - 26656387
Alignment:
Q  361 ccaaaacaaaactaacatcacgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccacc 460  Q
    ||||||| ||||||||| ||||||||||||||||||||||||| | |||||||||||||| ||||||||| || |||| | |||||||||||||| ||||    
T  26656257 ccaaaaccaaactaacaacacgatcaacgaaacaacataaacatatgttgtaccaaaatcttcaaacatcttcacaac-accacaaaaacaactttcacc 26656355  T
Q  461 acccacattccgctgctcgcacacaacccctg 492  Q
    ||||| |||| ||| || |||||| |||||||    
T  26656356 acccatattctgcttcttgcacacgacccctg 26656387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 361 - 492
Target Start/End: Original strand, 26927844 - 26927974
Alignment:
Q  361 ccaaaacaaaactaacatcacgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccacc 460  Q
    ||||||| ||||||||| ||||||||||||||||||||||||| | |||||||||||||| ||||||||| || |||| | |||||||||||||| ||||    
T  26927844 ccaaaaccaaactaacaacacgatcaacgaaacaacataaacatatgttgtaccaaaatcttcaaacatcttcacaac-accacaaaaacaactttcacc 26927942  T
Q  461 acccacattccgctgctcgcacacaacccctg 492  Q
    ||||| |||| ||| || |||||| |||||||    
T  26927943 acccatattctgcttcttgcacacgacccctg 26927974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 361 - 489
Target Start/End: Original strand, 21600723 - 21600839
Alignment:
Q  361 ccaaaacaaaactaacatcacgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccacc 460  Q
    |||||||||| |||||||||||| |||||||||||||||||||||            |||||||||||||||| |||||  ||||||||||||||| |||    
T  21600723 ccaaaacaaagctaacatcacgaacaacgaaacaacataaacaaa------------atcctcaaacatcgtcacaactgccacaaaaacaacttctacc 21600810  T
Q  461 acccacattccgctgctcgcacacaaccc 489  Q
    |||||||||||||||||||||||||||||    
T  21600811 acccacattccgctgctcgcacacaaccc 21600839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 363 - 492
Target Start/End: Original strand, 6989365 - 6989482
Alignment:
Q  363 aaaacaaaactaacatcacgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccaccac 462  Q
    |||||||| |||||| |||||||||||||||||||||||||||            |||||||| ||||||| |||||  ||||||||||||||| |||||    
T  6989365 aaaacaaagctaacaccacgatcaacgaaacaacataaacaaa------------atcctcaagcatcgtcacaactgccacaaaaacaacttctaccac 6989452  T
Q  463 ccacattccgctgctcgcacacaacccctg 492  Q
    ||||||||||||||||||||||||||||||    
T  6989453 ccacattccgctgctcgcacacaacccctg 6989482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 361 - 492
Target Start/End: Complemental strand, 1157805 - 1157686
Alignment:
Q  361 ccaaaacaaaactaacatcacgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccacc 460  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||            ||||||| ||||||| |||||  ||||||||||||||| |||    
T  1157805 ccaaaacaaagctaacaccacgatcaacgaaacaacataaacaaaa------------tcctcaagcatcgtcacaactgccacaaaaacaacttctacc 1157718  T
Q  461 acccacattccgctgctcgcacacaacccctg 492  Q
    ||||||||||||||||||||||| ||||||||    
T  1157717 acccacattccgctgctcgcacataacccctg 1157686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 391 - 490
Target Start/End: Complemental strand, 25444611 - 25444511
Alignment:
Q  391 aacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaa-ctatcacaaaaacaacttccaccacccacattccgctgctcgcacacaaccc 489  Q
    |||||||||||||||||||| | ||||| ||||||||||| |||||| ||   ||||||||||||||||||||| ||||||||||| |||||||||||||    
T  25444611 aacaacataaacaaaagttggatcaaaaccctcaaacatcatcgcaagctgctacaaaaacaacttccaccacctacattccgctgatcgcacacaaccc 25444512  T
Q  490 c 490  Q
    |    
T  25444511 c 25444511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 411 - 492
Target Start/End: Original strand, 7271389 - 7271466
Alignment:
Q  411 taccaaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccaccacccacattccgctgctcgcacacaacccctg 492  Q
    ||||||||||||||||||||||| ||||    ||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  7271389 taccaaaatcctcaaacatcgtcacaac----acaaaaacaactttcaccacccatattccgctgctcgcacacaacccctg 7271466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 414 - 489
Target Start/End: Original strand, 18696576 - 18696651
Alignment:
Q  414 caaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccaccacccacattccgctgctcgcacacaaccc 489  Q
    |||||||||||| |||||||||||||  ||||| |||||||| ||||||||||||||| |||||||||||||||||    
T  18696576 caaaatcctcaagcatcgtcgcaactgccacaataacaactttcaccacccacattccactgctcgcacacaaccc 18696651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 166 - 283
Target Start/End: Original strand, 14212117 - 14212234
Alignment:
Q  166 gttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaatagaggtaacg 265  Q
    ||||| |||||| || ||||||| |||||| ||||||||||||| | ||||||||| |||| |||| | ||||||||| ||||||| || | ||||||||    
T  14212117 gttcactgttgtgtataatggacctgcaatcgaatggttgaaattacataaaaaatattagccattaagaaattaacgaagaggactaaaataggtaacg 14212216  T
Q  266 gtagaagacataagggac 283  Q
     || || |||||||||||    
T  14212217 atataatacataagggac 14212234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 198 - 306
Target Start/End: Complemental strand, 41905333 - 41905225
Alignment:
Q  198 aatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgtt 297  Q
    |||||||  |||||||| |||||| | |  |||| ||||| |||||||||||| ||| |||||| |||||||||||||||||||||||  |||| || ||    
T  41905333 aatggttataatcatattaaaaatatgatacattaaaaaactaacggagaggatcaaaagaggtgacggtagaagacataagggaccagtttaagacatt 41905234  T
Q  298 ttatagtta 306  Q
    |||||||||    
T  41905233 ttatagtta 41905225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 414 - 489
Target Start/End: Complemental strand, 38958685 - 38958610
Alignment:
Q  414 caaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccaccacccacattccgctgctcgcacacaaccc 489  Q
    |||||||||||| ||||||| | |||  ||||||||||||||| |||||||||||||| |||| ||||||||||||    
T  38958685 caaaatcctcaagcatcgtcactactgacacaaaaacaacttctaccacccacattccactgcccgcacacaaccc 38958610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 442 - 492
Target Start/End: Complemental strand, 41356021 - 41355971
Alignment:
Q  442 cacaaaaacaacttccaccacccacattccgctgctcgcacacaacccctg 492  Q
    |||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  41356021 cacaaaaataacttctaccacccacattccgctgctcgcacacaacccctg 41355971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 157 - 253
Target Start/End: Original strand, 18695564 - 18695660
Alignment:
Q  157 gtgttgttggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggacca 253  Q
    |||||| | ||||| |||||||||||||| || ||||||  || |||||||| ||||| ||||||||||| |||| ||||| ||||||||| |||||    
T  18695564 gtgttgatagttcagtgttgtatacaatgaacctgcaatcaaacggttgaaaacatatcaaaaattttagacattaaaaaactaacggagatgacca 18695660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 157 - 253
Target Start/End: Original strand, 21389060 - 21389156
Alignment:
Q  157 gtgttgttggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggacca 253  Q
    |||||| | ||||| |||| ||||||||| || | ||||  || |||||||| ||||||||||||||||| |||| ||||| |||||||||||||||    
T  21389060 gtgttgatagttcagtgttttatacaatgaacctacaatcaaacggttgaaaacatataaaaaattttagacattaaaaaactaacggagaggacca 21389156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 182 - 253
Target Start/End: Original strand, 8188142 - 8188213
Alignment:
Q  182 aatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggacca 253  Q
    ||||||||||||||  ||||||| ||||||||| | ||||||||| |||| ||||| |||||||||||||||    
T  8188142 aatggacatgcaatcaaatggttaaaatcatatcagaaattttagacattaaaaaactaacggagaggacca 8188213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 15509312 - 15509245
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    |||||||||||||||| | ||||||||| |||||||||||||||||||||| | ||  ||||||||||    
T  15509312 taacggagaggaccaaaataggtaacggcagaagacataagggaccaaattgagacactttatagtta 15509245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 15510262 - 15510329
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    |||| ||||||||||| ||||||||||| |||||||||||||||||||||| | ||  ||||||||||    
T  15510262 taacagagaggaccaaaagaggtaacggcagaagacataagggaccaaattgagacactttatagtta 15510329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 182 - 307
Target Start/End: Complemental strand, 1273263 - 1273138
Alignment:
Q  182 aatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaatagaggtaacggtagaagacataaggg 281  Q
    ||||||| |||||| |||||||||||||||||| |||||| |||  |||| ||||| |||||||| ||||||| |  |  ||| | ||||||  || |||    
T  1273263 aatggacctgcaatcgaatggttgaaatcatatcaaaaatattaaacattaaaaaactaacggaggggaccaaaattgtaaactgcagaagatttatggg 1273164  T
Q  282 accaaattaaaacgttttatagttaa 307  Q
    |||||||| | || ||||||||||||    
T  1273163 accaaattgagacattttatagttaa 1273138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 153 - 254
Target Start/End: Original strand, 10736848 - 10736949
Alignment:
Q  153 ttaagtgttgttggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggacc 252  Q
    ||||||||||  |||||| | ||  ||||||||||||| ||||  ||||||| |||||| || ||||||||||| |||| |||| ||||||||| |||||    
T  10736848 ttaagtgttgacggttcactattagatacaatggacattcaatcaaatggttaaaatcaaatcaaaaattttagacattaaaaagttaacggaggggacc 10736947  T
Q  253 aa 254  Q
    ||    
T  10736948 aa 10736949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 20991648 - 20991715
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    ||||||| |||||||| ||||||||||  | |||||||||||||||||||| | || |||||||||||    
T  20991648 taacggataggaccaaaagaggtaacgacaaaagacataagggaccaaattgagacattttatagtta 20991715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 22650627 - 22650694
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    ||||||| |||||||| ||||||||||| | |||||||||||||||||||| | ||  ||||||||||    
T  22650627 taacggataggaccaaaagaggtaacggcaaaagacataagggaccaaattgagacactttatagtta 22650694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 363 - 406
Target Start/End: Complemental strand, 41356096 - 41356053
Alignment:
Q  363 aaaacaaaactaacatcacgatcaacgaaacaacataaacaaaa 406  Q
    |||||||| |||||| ||||||||||||||||||||||||||||    
T  41356096 aaaacaaagctaacaccacgatcaacgaaacaacataaacaaaa 41356053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 246
Target Start/End: Complemental strand, 9219357 - 9219289
Alignment:
Q  178 atacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggag 246  Q
    |||||||| |||||||||  || |||| |||||| |||||||||||||| |||| ||||| ||||||||    
T  9219357 atacaatgaacatgcaatcaaacggttaaaatcaaataaaaaattttagacattaaaaaactaacggag 9219289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 15857568 - 15857632
Alignment:
Q  190 tgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaa 254  Q
    |||||||||||||||| |||||||| |||||| |||  |||| ||||| ||||||||| ||||||    
T  15857568 tgcaattgaatggttggaatcatatcaaaaatattaaacattaaaaaactaacggagatgaccaa 15857632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 33431934 - 33431882
Alignment:
Q  174 ttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttag 226  Q
    ||||||| ||||||| |||||| ||||| ||||||||||||||||||| ||||    
T  33431934 ttgtatataatggacctgcaatcgaatgattgaaatcatataaaaaatattag 33431882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 4567068 - 4567001
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    |||| |||| |||||| ||||||||||  |||||||||||||||||||||| | ||  ||||||||||    
T  4567068 taacagagatgaccaaaagaggtaacgacagaagacataagggaccaaattgagacactttatagtta 4567001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 4567973 - 4568040
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    ||||||||| |||||| | |||||| || |||||||||||||||||||||| | ||  ||||||||||    
T  4567973 taacggagatgaccaaaataggtaaaggcagaagacataagggaccaaattgagacactttatagtta 4568040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 253
Target Start/End: Complemental strand, 5975930 - 5975859
Alignment:
Q  182 aatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggacca 253  Q
    ||||||||||||||  ||||||| ||||||||| ||||| ||||| |||| ||||| |||| ||||| ||||    
T  5975930 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaacca 5975859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 20988807 - 20988740
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    |||||||||||||||| ||||||||||| | |||||||||| ||| ||||| | ||  ||||||||||    
T  20988807 taacggagaggaccaaaagaggtaacggcacaagacataagagactaaattgagacactttatagtta 20988740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 306
Target Start/End: Complemental strand, 21387762 - 21387687
Alignment:
Q  231 ttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    ||||||| |||| || |||||||| ||||||||||| ||||||  || ||||||||||| | || |||||||||||    
T  21387762 ttaaaaactaacagacaggaccaaaagaggtaacggcagaagatttatgggaccaaattgagacattttatagtta 21387687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 406
Target Start/End: Complemental strand, 38958731 - 38958681
Alignment:
Q  355 attaagccaaaacaaaactaacatcacgatcaacgaaacaacataaacaaaa 406  Q
    ||||||||||| |||| |||||| || |||||||||||||||||||||||||    
T  38958731 attaagccaaa-caaagctaacaacatgatcaacgaaacaacataaacaaaa 38958681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 192 - 254
Target Start/End: Original strand, 5384298 - 5384360
Alignment:
Q  192 caattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaa 254  Q
    |||| ||||||||||||| |||| |||||| |||  |||| ||||| ||||||||||||||||    
T  5384298 caatcgaatggttgaaattatatcaaaaatattaaacattaaaaaactaacggagaggaccaa 5384360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 403
Target Start/End: Original strand, 7270182 - 7270224
Alignment:
Q  361 ccaaaacaaaactaacatcacgatcaacgaaacaacataaaca 403  Q
    ||||||| || |||||| |||||||||||||||||||||||||    
T  7270182 ccaaaaccaagctaacagcacgatcaacgaaacaacataaaca 7270224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 254
Target Start/End: Original strand, 22812328 - 22812401
Alignment:
Q  182 aatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatt-taaaaattaacggagaggaccaa 254  Q
    ||||||| |||||| |||||||||||||||||| |||||| |||  ||||  ||||| |||||||| |||||||    
T  22812328 aatggacctgcaatcgaatggttgaaatcatatcaaaaatattaaacattaaaaaaactaacggaggggaccaa 22812401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 491
Target Start/End: Complemental strand, 27632571 - 27632522
Alignment:
Q  442 cacaaaaacaacttccaccacccacattccgctgctcgcacacaacccct 491  Q
    ||||||||  |||||||||||| |||| | ||||||||||||||||||||    
T  27632571 cacaaaaattacttccaccacctacatcctgctgctcgcacacaacccct 27632522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 307
Target Start/End: Original strand, 32735397 - 32735546
Alignment:
Q  158 tgttgttggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaatag 257  Q
    ||||| ||||||| ||||||| ||| | ||| ||||||  ||  |||||||| ||||||||||| |||| |||| ||| | |||| |||| |||||| |     
T  32735397 tgttggtggttcagtgttgtacacagtagacctgcaatcaaactgttgaaattatataaaaaatattagacattaaaatactaacagagatgaccaaaat 32735496  T
Q  258 aggtaacggtagaagacataagggaccaaattaaaacgttttatagttaa 307  Q
    |   ||||| ||||||  || |||||||||||||||| ||| ||| ||||    
T  32735497 aataaacggcagaagagttatgggaccaaattaaaacatttaataattaa 32735546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 491
Target Start/End: Complemental strand, 36608244 - 36608195
Alignment:
Q  442 cacaaaaacaacttccaccacccacattccgctgctcgcacacaacccct 491  Q
    |||||||||||||| ||||||  ||| |||||||||||| ||||||||||    
T  36608244 cacaaaaacaactttcaccacttacactccgctgctcgcgcacaacccct 36608195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 18693823 - 18693747
Alignment:
Q  231 ttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagttaa 307  Q
    ||||||| |||| ||||||||||| ||||||||||  ||||||  || ||||||| ||| | || ||||||||||||    
T  18693823 ttaaaaactaacagagaggaccaaaagaggtaacgacagaagatttatgggaccagattgagacattttatagttaa 18693747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 104; Significance: 1e-51; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 361 - 492
Target Start/End: Original strand, 21880943 - 21881074
Alignment:
Q  361 ccaaaacaaaactaacatcacgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccacc 460  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||  |||||||| ||||||||||    
T  21880943 ccaaaacaaagctaacaccacgatcaacgaagcaacataaacaaaagttgtaccaaaatcctcaaacatcgtcacaactgccacaaaaataacttccacc 21881042  T
Q  461 acccacattccgctgctcgcacacaacccctg 492  Q
    ||||||||||||||||||||||||||||||||    
T  21881043 acccacattccgctgctcgcacacaacccctg 21881074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 365 - 490
Target Start/End: Complemental strand, 3524147 - 3524022
Alignment:
Q  365 aacaaaactaacatcacgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccaccaccc 464  Q
    |||||| ||| || || ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||  |||||||||||||| || ||||     
T  3524147 aacaaagctatcaccatgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacatcatcacaactgccacaaaaacaacttacatcacct 3524048  T
Q  465 acattccgctgctcgcacacaacccc 490  Q
    ||| || ||||||| |||||||||||    
T  3524047 acaatctgctgctcacacacaacccc 3524022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 361 - 490
Target Start/End: Complemental strand, 34213981 - 34213852
Alignment:
Q  361 ccaaaacaaaactaacatcacgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccacc 460  Q
    ||||||||||  ||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||| ||  | ||  |||||||||||||| ||||    
T  34213981 ccaaaacaaagttaacaccacgatcaacaaaacaacataaacaaaagttgtaccaaaatccccaaacatcctcatagctgccacaaaaacaactttcacc 34213882  T
Q  461 acccacattccgctgctcgcacacaacccc 490  Q
    |||||||||  |||||| ||||||||||||    
T  34213881 acccacattttgctgcttgcacacaacccc 34213852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 157 - 302
Target Start/End: Complemental strand, 18773853 - 18773708
Alignment:
Q  157 gtgttgttggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaata 256  Q
    |||||| ||||||||||||||||||||| |||||||||| |||||||| ||||||||| |||||  | || |||| ||||| |||| ||||||||||| |    
T  18773853 gtgttggtggttcattgttgtatacaatagacatgcaatcgaatggttaaaatcatatcaaaaacatcagacattaaaaaactaacagagaggaccaaaa 18773754  T
Q  257 gaggtaacggtagaagacataagggaccaaattaaaacgttttata 302  Q
     |||||||   ||| |||||||||||||||||| | || |||||||    
T  18773753 aaggtaacacgagaggacataagggaccaaattgagacattttata 18773708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 445 - 489
Target Start/End: Original strand, 20740212 - 20740256
Alignment:
Q  445 aaaaacaacttccaccacccacattccgctgctcgcacacaaccc 489  Q
    |||||||||||| | ||||||||||||||||||||||||||||||    
T  20740212 aaaaacaacttctatcacccacattccgctgctcgcacacaaccc 20740256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 8447338 - 8447271
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    ||||||| |||||||| ||||||||||| | |||||||||||||||||||| | ||  ||||||||||    
T  8447338 taacggataggaccaaaagaggtaacggcaaaagacataagggaccaaattgagacactttatagtta 8447271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 8456142 - 8456075
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    ||||||| |||||||| ||||||||||| | |||||||||||||||||||| | ||  ||||||||||    
T  8456142 taacggataggaccaaaagaggtaacggcaaaagacataagggaccaaattgagacactttatagtta 8456075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 436 - 489
Target Start/End: Complemental strand, 34503327 - 34503274
Alignment:
Q  436 aactatcacaaaaacaacttccaccacccacattccgctgctcgcacacaaccc 489  Q
    ||||| |||||||||||||||||||||| |||||||| |||||| |||| ||||    
T  34503327 aactaccacaaaaacaacttccaccacctacattccgatgctcgtacactaccc 34503274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 2138636 - 2138703
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    |||| ||||||||||| ||||||||||  |||||||||||||||| ||||| | ||  ||||||||||    
T  2138636 taacagagaggaccaaaagaggtaacgacagaagacataagggactaaattgagacactttatagtta 2138703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 19368517 - 19368584
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    ||||||||||||| || ||||||||||  |||||||||||| ||||||||| | ||  ||||||||||    
T  19368517 taacggagaggactaaaagaggtaacgacagaagacataagagaccaaattgagacactttatagtta 19368584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 179 - 242
Target Start/End: Original strand, 30232842 - 30232905
Alignment:
Q  179 tacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaac 242  Q
    ||||||||||||||||| | |||||| |||| |||||||||| ||||| |||| ||||| ||||    
T  30232842 tacaatggacatgcaatcggatggttaaaattatataaaaaagtttagacattaaaaaaataac 30232905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 444 - 486
Target Start/End: Original strand, 14287382 - 14287424
Alignment:
Q  444 caaaaacaacttccaccacccacattccgctgctcgcacacaa 486  Q
    ||||| |||||||||||||| |||||||||||||| |||||||    
T  14287382 caaaatcaacttccaccacctacattccgctgctcacacacaa 14287424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 18242245 - 18242318
Alignment:
Q  178 atacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggac 251  Q
    ||||||||||||||||||  ||||||| |||| | || |||||||| || |||| ||||| |||||||| ||||    
T  18242245 atacaatggacatgcaatcaaatggttaaaattaaattaaaaatttaagacattaaaaaactaacggaggggac 18242318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 490
Target Start/End: Original strand, 22696261 - 22696306
Alignment:
Q  445 aaaaacaacttccaccacccacattccgctgctcgcacacaacccc 490  Q
    ||||||||||||||||||| |||||  | |||||||||||||||||    
T  22696261 aaaaacaacttccaccacctacattttgttgctcgcacacaacccc 22696306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 179 - 255
Target Start/End: Original strand, 138142 - 138218
Alignment:
Q  179 tacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaat 255  Q
    ||||||||||||||||| | |||||| |||| | || ||||| ||||| |||| ||||| |||||||| ||| ||||    
T  138142 tacaatggacatgcaatcggatggttaaaattacatcaaaaagtttagacattaaaaaaataacggaggggatcaat 138218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 179 - 255
Target Start/End: Original strand, 146163 - 146239
Alignment:
Q  179 tacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaat 255  Q
    ||||||||||||||||| | |||||| |||| | || ||||| ||||| |||| ||||| |||||||| ||| ||||    
T  146163 tacaatggacatgcaatcggatggttaaaattacatcaaaaagtttagacattaaaaaaataacggaggggatcaat 146239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 446 - 490
Target Start/End: Complemental strand, 11444828 - 11444784
Alignment:
Q  446 aaaacaacttccaccacccacattccgctgctcgcacacaacccc 490  Q
    |||||||||||||||||| || |||  ||||||||||||||||||    
T  11444828 aaaacaacttccaccacctacgttcgactgctcgcacacaacccc 11444784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 99; Significance: 1e-48; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 362 - 492
Target Start/End: Original strand, 17374841 - 17374970
Alignment:
Q  362 caaaacaaaactaacatcacgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccacca 461  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||  |||||||| |||||||||||    
T  17374841 caaaacaaagctaacaccacgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacatcgt-acaactgccacaaaaataacttccacca 17374939  T
Q  462 cccacattccgctgctcgcacacaacccctg 492  Q
    |||||||||||||||||||||||||||||||    
T  17374940 cccacattccgctgctcgcacacaacccctg 17374970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 157 - 317
Target Start/End: Original strand, 4830592 - 4830752
Alignment:
Q  157 gtgttgttggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaata 256  Q
    |||||||||||||| ||||||||||||||||| | |||| |||||||||||||||||| |||||| |||| |||| ||||| ||||||||||||| || |    
T  4830592 gtgttgttggttcaatgttgtatacaatggacctacaatcgaatggttgaaatcatatcaaaaatattagacattcaaaaactaacggagaggactaaaa 4830691  T
Q  257 gaggtaacggtagaagacataagggaccaaattaaaacgttttatagttaatgtaccattt 317  Q
    ||| ||||||||| ||| ||||| ||||||||||||||||||||||||||| |||||||||    
T  4830692 gagataacggtaggagatataagagaccaaattaaaacgttttatagttaaggtaccattt 4830752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 381 - 492
Target Start/End: Original strand, 4869176 - 4869286
Alignment:
Q  381 cgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccaccacccacattccgctgctcgc 480  Q
    ||||||||||||||||||||||| | || |||||||||||||||||||||||| |||| | |||||||||||||| ||||||||| ||||||||||||||    
T  4869176 cgatcaacgaaacaacataaacatatgtggtaccaaaatcctcaaacatcgtcacaac-accacaaaaacaactttcaccacccatattccgctgctcgc 4869274  T
Q  481 acacaacccctg 492  Q
    ||| ||||||||    
T  4869275 acaaaacccctg 4869286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 157 - 282
Target Start/End: Original strand, 26205964 - 26206089
Alignment:
Q  157 gtgttgttggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaata 256  Q
    |||||| | ||||||||||||||||||| |||||||||| ||||||||||||| ||||| ||||| ||||||||| ||||| |||||||||||||||| |    
T  26205964 gtgttggttgttcattgttgtatacaatagacatgcaatcgaatggttgaaattatatataaaatattagtcattaaaaaactaacggagaggaccaaaa 26206063  T
Q  257 gaggtaacggtagaagacataaggga 282  Q
    ||||||| |  | |||||||||||||    
T  26206064 gaggtaatgacaaaagacataaggga 26206089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 372 - 487
Target Start/End: Original strand, 34659789 - 34659904
Alignment:
Q  372 ctaacatcacgatcaacgaaacaacataaacaaaagtt-gtaccaaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccaccacccacattc 470  Q
    |||||| ||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||  ||| | |||||||||||||| ||||||||| ||||    
T  34659789 ctaacaacacgatcaacgaaacaacataaacatatgtttgtaccaaaatcctcaaacatcgtctgaac-accacaaaaacaactttcaccacccatattc 34659887  T
Q  471 cgctgctcgcacacaac 487  Q
    |||||||||||||||||    
T  34659888 cgctgctcgcacacaac 34659904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 157 - 306
Target Start/End: Original strand, 4513670 - 4513819
Alignment:
Q  157 gtgttgttggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaata 256  Q
    |||||| ||| ||||||||||| ||||| ||||||||||  |||||||||||| |||| |||||| ||| | | | ||||| |||||||||| | ||| |    
T  4513670 gtgttggtggctcattgttgtacacaatagacatgcaatcaaatggttgaaattatatcaaaaatattatttaataaaaaactaacggagagaatcaaaa 4513769  T
Q  257 gaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    |||||||||  |||||||||||  |||||| |||| ||||||| ||||||    
T  4513770 gaggtaacgacagaagacataaaagaccaatttaagacgttttttagtta 4513819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 414 - 486
Target Start/End: Original strand, 3921172 - 3921244
Alignment:
Q  414 caaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccaccacccacattccgctgctcgcacacaa 486  Q
    |||||||||||| ||||||| |||||  ||||||||||||||| |||||||||||||||||||||||||||||    
T  3921172 caaaatcctcaagcatcgtcacaactgccacaaaaacaacttctaccacccacattccgctgctcgcacacaa 3921244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 172 - 307
Target Start/End: Complemental strand, 15850296 - 15850161
Alignment:
Q  172 tgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaatagaggtaacggtagaa 271  Q
    |||||||||| |||||| ||||||  || ||||||||||| ||||||||| |||| |||||||| | |||| ||||||||| | | ||||||| | ||||    
T  15850296 tgttgtatacgatggacttgcaatcaaacggttgaaatcaaataaaaaatattagacatttaaatactaacagagaggaccgaaataggtaacagaagaa 15850197  T
Q  272 gacataagggaccaaattaaaacgttttatagttaa 307  Q
     ||| ||||||||||||| | ||  |||||||||||    
T  15850196 tacacaagggaccaaattgagacactttatagttaa 15850161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 157 - 279
Target Start/End: Original strand, 14716112 - 14716234
Alignment:
Q  157 gtgttgttggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaata 256  Q
    |||||| ||||||||||||||||| ||| |||||||||| |||||  |||||||| || ||| || ||||  ||| ||||| ||| |||||||||||| |    
T  14716112 gtgttggtggttcattgttgtatataatagacatgcaatcgaatgactgaaatcaaatcaaagatattagatattaaaaaactaatggagaggaccaaaa 14716211  T
Q  257 gaggtaacggtagaagacataag 279  Q
    |||||||| | ||||||| ||||    
T  14716212 gaggtaacagaagaagacttaag 14716234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 415 - 488
Target Start/End: Original strand, 1894984 - 1895057
Alignment:
Q  415 aaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccaccacccacattccgctgctcgcacacaacc 488  Q
    ||||||||||| ||||||| |||||  ||||||||||||||| ||||||||||||||| ||||| |||||||||    
T  1894984 aaaatcctcaagcatcgtcacaactgccacaaaaacaacttctaccacccacattccgttgctcacacacaacc 1895057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 26205138 - 26205062
Alignment:
Q  231 ttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagttaa 307  Q
    ||||||| ||||||||||||||||  |||||||||| ||||||||||||||||||| || | ||||||| |||||||    
T  26205138 ttaaaaactaacggagaggaccaaacgaggtaacggaagaagacataagggaccaatttgagacgttttttagttaa 26205062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 414 - 485
Target Start/End: Complemental strand, 1552131 - 1552060
Alignment:
Q  414 caaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccaccacccacattccgctgctcgcacaca 485  Q
    |||||||||||| ||||||| |||||  ||||||||||||||| ||||| ||||||| ||||||||||||||    
T  1552131 caaaatcctcaagcatcgtcacaactgccacaaaaacaacttctaccacacacattctgctgctcgcacaca 1552060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 2305657 - 2305590
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||| | ||  ||||||||||    
T  2305657 taacggagaggaccaaaagaggtaacggcagaagacataagggaccaaattgagacactttatagtta 2305590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 231 - 318
Target Start/End: Original strand, 41296445 - 41296532
Alignment:
Q  231 ttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagttaatgtaccatttt 318  Q
    ||||||| |||||||||||||||| |||| |||||  | || ||||||||||||||||| ||||||||| ||||||| | ||||||||    
T  41296445 ttaaaaactaacggagaggaccaaaagagataacgacaaaaaacataagggaccaaattgaaacgttttttagttaagggaccatttt 41296532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 442 - 486
Target Start/End: Complemental strand, 3258026 - 3257982
Alignment:
Q  442 cacaaaaacaacttccaccacccacattccgctgctcgcacacaa 486  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  3258026 cacaaaaacaacttccaccacctacattccgctgctcgcacacaa 3257982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 243 - 306
Target Start/End: Complemental strand, 3665337 - 3665274
Alignment:
Q  243 ggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    ||||| || ||| ||||||||||| |||||||||||||||||||||| |||| |||||||||||    
T  3665337 ggagatgatcaaaagaggtaacggcagaagacataagggaccaaattgaaacattttatagtta 3665274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 306
Target Start/End: Complemental strand, 4512231 - 4512156
Alignment:
Q  231 ttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    ||||||| ||| |||||||||||| ||||||||||| |||||||| |||||||||| || | ||||||| ||||||    
T  4512231 ttaaaaactaatggagaggaccaaaagaggtaacggaagaagacacaagggaccaatttgagacgttttttagtta 4512156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 239 - 289
Target Start/End: Original strand, 2306660 - 2306710
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaatt 289  Q
    |||||||||||||||| ||||||||||| ||||||||||| ||||||||||    
T  2306660 taacggagaggaccaaaagaggtaacggcagaagacataatggaccaaatt 2306710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 361 - 492
Target Start/End: Complemental strand, 17282523 - 17282405
Alignment:
Q  361 ccaaaacaaaactaacatcacgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccacc 460  Q
    |||||| ||| |||||| ||||||||||||||||||||||||            ||||||||||| ||||||| |||||  ||||||||||||||| |||    
T  17282523 ccaaaataaatctaacaccacgatcaacgaaacaacataaac------------aaaatcctcaagcatcgtcacaactgccacaaaaacaacttctacc 17282436  T
Q  461 acccacattccgctgctcgcacacaacccctg 492  Q
    | ||||| || ||||||| |||||||||||||    
T  17282435 a-ccacaatctgctgctcacacacaacccctg 17282405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 200 - 265
Target Start/End: Original strand, 8538584 - 8538649
Alignment:
Q  200 tggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaatagaggtaacg 265  Q
    |||||||||| |||| |||||| ||||||||| ||||||||||||||| |||||| | ||||||||    
T  8538584 tggttgaaattatatcaaaaatattagtcattaaaaaattaacggagatgaccaaaataggtaacg 8538649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 299
Target Start/End: Complemental strand, 14714617 - 14714549
Alignment:
Q  231 ttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgtttt 299  Q
    ||||||| |||||||||||||||| || |||||||| ||||||||||||  ||||| || |||||||||    
T  14714617 ttaaaaactaacggagaggaccaaaagtggtaacggaagaagacataagcaaccaatttgaaacgtttt 14714549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 182 - 254
Target Start/End: Original strand, 40174707 - 40174778
Alignment:
Q  182 aatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaa 254  Q
    ||||||| |||||| ||||||||||||||||||||||||| |||  |||| ||||| ||||||||| ||||||    
T  40174707 aatggacctgcaatcgaatggttgaaatcatataaaaaatatta-acattaaaaaactaacggagatgaccaa 40174778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 426
Target Start/End: Complemental strand, 11163614 - 11163571
Alignment:
Q  383 atcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaa 426  Q
    |||||||| |||||||||||||||||||||| ||||||||||||    
T  11163614 atcaacgacacaacataaacaaaagttgtacaaaaatcctcaaa 11163571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 33836886 - 33836819
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    |||||||||||||||| |||||||||| ||||||||||||  ||||||||| | ||  ||||||||||    
T  33836886 taacggagaggaccaaaagaggtaacgatagaagacataaatgaccaaattgagacactttatagtta 33836819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 289
Target Start/End: Complemental strand, 41312617 - 41312567
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaatt 289  Q
    |||||||||||||||| ||||||||||| | |||||||||| |||||||||    
T  41312617 taacggagaggaccaaaagaggtaacggcataagacataagagaccaaatt 41312567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 1147926 - 1147853
Alignment:
Q  182 aatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaat 255  Q
    |||||||||||||| | |||||| ||||||||| ||||| ||||| |||| ||||| |||||||| ||| ||||    
T  1147926 aatggacatgcaatcggatggttaaaatcatatcaaaaagtttagacattaaaaaaataacggaggggatcaat 1147853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 24476661 - 24476701
Alignment:
Q  81 atatgaacttaatgattaaaatgatgaagattaagaggaaga 122  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  24476661 atatgaacttaatgattaaaatgatg-agattaagaggaaga 24476701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 3666267 - 3666334
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    ||||||| | |||||| ||||||||||||  |||||||||||||||||||| | ||  ||||||||||    
T  3666267 taacggatatgaccaaaagaggtaacggttaaagacataagggaccaaattgagacactttatagtta 3666334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 239 - 289
Target Start/End: Complemental strand, 3254973 - 3254923
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaatt 289  Q
    ||||||| |||||||| ||||||||||  | ||||||||||||||||||||    
T  3254973 taacggataggaccaaaagaggtaacgacaaaagacataagggaccaaatt 3254923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 444 - 490
Target Start/End: Original strand, 5051106 - 5051152
Alignment:
Q  444 caaaaacaacttccaccacccacattccgctgctcgcacacaacccc 490  Q
    |||||||||||||||| ||  ||||||| ||||||||||||||||||    
T  5051106 caaaaacaacttccacgacttacattcccctgctcgcacacaacccc 5051152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 245
Target Start/End: Complemental strand, 19397710 - 19397644
Alignment:
Q  179 tacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacgga 245  Q
    |||||||||||||||||  ||||||| |||| |||| |||| |||||| |||| ||||| |||||||    
T  19397710 tacaatggacatgcaatccaatggttaaaattatatcaaaagttttagacattaaaaaaataacgga 19397644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 366
Target Start/End: Complemental strand, 23177698 - 23177664
Alignment:
Q  332 taaattaagagaccaaatgatgtattaagccaaaa 366  Q
    ||||||||| |||||||||||||||||||||||||    
T  23177698 taaattaagggaccaaatgatgtattaagccaaaa 23177664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 366
Target Start/End: Complemental strand, 23588955 - 23588921
Alignment:
Q  332 taaattaagagaccaaatgatgtattaagccaaaa 366  Q
    ||||||||| |||||||||||||||||||||||||    
T  23588955 taaattaagggaccaaatgatgtattaagccaaaa 23588921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 406
Target Start/End: Complemental strand, 1552172 - 1552127
Alignment:
Q  361 ccaaaacaaaactaacatcacgatcaacgaaacaacataaacaaaa 406  Q
    |||||||| | |||||| |||||||||| |||||||||||||||||    
T  1552172 ccaaaacatagctaacaccacgatcaacaaaacaacataaacaaaa 1552127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 10368302 - 10368366
Alignment:
Q  157 gtgttgttggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaat 221  Q
    |||||| ||||||| ||| ||||| |||||||||||||| ||| ||| |||| ||||| ||||||    
T  10368302 gtgttggtggttcagtgtggtatataatggacatgcaatcgaacggtcgaaaacatatcaaaaat 10368366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 14509334 - 14509258
Alignment:
Q  231 ttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagttaa 307  Q
    |||||||||||||||||||||||| | ||  ||||  ||||||  || |||||| |||||||||  |||||||||||    
T  14509334 ttaaaaattaacggagaggaccaaaatagtaaacgacagaagatttatgggaccgaattaaaacactttatagttaa 14509258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 4e-45; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 81 - 319
Target Start/End: Complemental strand, 16362697 - 16362456
Alignment:
Q  81 atatgaacttaatgattaaaatgatgaagattaagaggaagaggg---agggagaagaagataaggnnnnnnnnnttaagtgttgttggttcattgttgt 177  Q
    ||||||||||||||||||| ||| ||||||||| |||||||| |    || |||||||||| ||||         ||| |||||||||| ||| |||| |    
T  16362697 atatgaacttaatgattaagatggtgaagattacgaggaagaagagacagagagaagaagaaaaggaaaaaataattaggtgttgttggctcactgttat 16362598  T
Q  178 atacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaatagaggtaacggtagaagacata 277  Q
    |||||||| || |||||| ||| |||||||||||||| |||||| |||| |||| ||||| |||||||||||||||| ||| |||||||| ||||| |||    
T  16362597 atacaatgtacctgcaatcgaacggttgaaatcatatcaaaaatattagacattaaaaaactaacggagaggaccaaaagatgtaacggtggaagatata 16362498  T
Q  278 agggaccaaattaaaacgttttatagttaatgtaccattttg 319  Q
    || ||||||||| ||||||||||||||||| |||||||||||    
T  16362497 agagaccaaattgaaacgttttatagttaaggtaccattttg 16362456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 373 - 488
Target Start/End: Original strand, 10408363 - 10408478
Alignment:
Q  373 taacatcacgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccaccacccacattccg 472  Q
    ||||||||| |||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||  ||||||||||||||||||| || ||||||||    
T  10408363 taacatcacaatcaactaaacaacataaacaaaagttgtaccgaaattctcaaacatcgtcgcaactgccacaaaaacaacttccaccgcctacattccg 10408462  T
Q  473 ctgctcgcacacaacc 488  Q
    ||||||||||||||||    
T  10408463 ctgctcgcacacaacc 10408478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 379 - 486
Target Start/End: Original strand, 5994154 - 5994261
Alignment:
Q  379 cacgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccaccacccacattccgctgctc 478  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||| | |||| |||||||    
T  5994154 cacgatcaacgaaacaacataaacaaaagatgtaccaaaatcctcaaacatcgtcacaactaccacaaaaacaacttccaccacctagattctgctgctc 5994253  T
Q  479 gcacacaa 486  Q
    || |||||    
T  5994254 gcgcacaa 5994261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 153 - 299
Target Start/End: Complemental strand, 44102152 - 44102006
Alignment:
Q  153 ttaagtgttgttggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggacc 252  Q
    |||||||||| ||| ||||||||||| ||||| ||||||||||  ||||||||| || ||||||||||| ||||||||| ||||| |||| |||||||||    
T  44102152 ttaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaatattagtcattaaaaaactaacagagaggacc 44102053  T
Q  253 aatagaggtaacggtagaagacataagggaccaaattaaaacgtttt 299  Q
    || ||||||||||| |||||||||||| |||||| || | |||||||    
T  44102052 aaaagaggtaacggaagaagacataagagaccaatttgagacgtttt 44102006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 158 - 306
Target Start/End: Original strand, 13514783 - 13514931
Alignment:
Q  158 tgttgttggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaatag 257  Q
    ||||| ||| ||||||||||||||||| |||||||||| |||||||| |||| |||| |||||  ||||||||| ||||| ||||||||| |||||| ||    
T  13514783 tgttggtggctcattgttgtatacaatagacatgcaatcgaatggtttaaattatatcaaaaacattagtcattaaaaaactaacggagatgaccaaaag 13514882  T
Q  258 aggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    ||||||| | ||||||||||||||||||| || | ||||||| ||||||    
T  13514883 aggtaacagaagaagacataagggaccaatttgagacgttttttagtta 13514931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 158 - 306
Target Start/End: Original strand, 13604316 - 13604464
Alignment:
Q  158 tgttgttggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaatag 257  Q
    ||||| ||| ||||||||||||||||| |||||||||| |||||||| |||| |||| |||||  ||||||||| ||||| ||||||||| |||||| ||    
T  13604316 tgttggtggctcattgttgtatacaatagacatgcaatcgaatggtttaaattatatcaaaaacattagtcattaaaaaactaacggagatgaccaaaag 13604415  T
Q  258 aggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    ||||||| | ||||||||||||||||||| || | ||||||| ||||||    
T  13604416 aggtaacagaagaagacataagggaccaatttgagacgttttttagtta 13604464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 156 - 306
Target Start/End: Complemental strand, 39323987 - 39323837
Alignment:
Q  156 agtgttgttggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaat 255  Q
    ||||||| || |||||||||||||||||| ||||||||||  ||||||| |||| |||| |||||| ||||   || ||||| ||||||||||||||||     
T  39323987 agtgttggtgtttcattgttgtatacaatagacatgcaatctaatggttaaaattatatcaaaaatattagatcttgaaaaactaacggagaggaccaaa 39323888  T
Q  256 agaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    ||||||||||| |||||||||||| || ||| || | ||||||| ||||||    
T  39323887 agaggtaacggaagaagacataagagatcaatttgagacgttttttagtta 39323837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 361 - 492
Target Start/End: Original strand, 20860822 - 20860960
Alignment:
Q  361 ccaaaacaaaactaacatcacgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaactatcac-------aaaaacaac 453  Q
    |||||||||| |||||| | | ||||||||||||||||||||||||||||||||||| ||||||||||  ||| |||||  |||       ||||| |||    
T  20860822 ccaaaacaaagctaacaccgcaatcaacgaaacaacataaacaaaagttgtaccaaagtcctcaaacaaggtcacaactgccacacaaaaaaaaaaaaac 20860921  T
Q  454 ttccaccacccacattccgctgctcgcacacaacccctg 492  Q
    |||||||| ||||||| |||||||| |||||||||||||    
T  20860922 ttccaccaaccacatttcgctgctctcacacaacccctg 20860960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 164 - 254
Target Start/End: Original strand, 40251280 - 40251370
Alignment:
Q  164 tggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaa 254  Q
    ||||||| ||||||| ||||| ||| ||||||||||||||||||||||||| |||||| |||| |||| |||||||||  |||||||||||    
T  40251280 tggttcagtgttgtacacaatagacctgcaattgaatggttgaaatcatatcaaaaatattagacattaaaaaattaattgagaggaccaa 40251370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 164 - 254
Target Start/End: Complemental strand, 37275079 - 37274989
Alignment:
Q  164 tggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaa 254  Q
    ||||||| ||||||||| | |||||||||||| |||||||||||||||||| | |||| |||  |||| ||||| ||||||||||||||||    
T  37275079 tggttcactgttgtatatattggacatgcaatcgaatggttgaaatcatatcagaaatgttatacattaaaaaactaacggagaggaccaa 37274989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 165 - 306
Target Start/End: Complemental strand, 38175 - 38035
Alignment:
Q  165 ggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaatagaggtaac 264  Q
    |||||| ||||  ||||||||||||||||||| ||||||| ||||||||| ||||| ||||| || ||||||| |||||||||||||||  | ||  |||    
T  38175 ggttcactgttaaatacaatggacatgcaattaaatggttaaaatcatatcaaaaaatttagaca-ttaaaaactaacggagaggaccacaatagtaaac 38077  T
Q  265 ggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    ||  |||||| || | ||||||||| ||||  ||||||||||    
T  38076 ggaggaagacttatgagaccaaattcaaacactttatagtta 38035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 403 - 462
Target Start/End: Original strand, 6443585 - 6443644
Alignment:
Q  403 aaaagttgtaccaaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccaccac 462  Q
    |||||||||||||||||||||||||||| || |||||  |||||||||||||||||||||    
T  6443585 aaaagttgtaccaaaatcctcaaacatcatcacaactgccacaaaaacaacttccaccac 6443644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 231 - 306
Target Start/End: Complemental strand, 21670189 - 21670114
Alignment:
Q  231 ttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    ||||||| ||||||||| |||||| ||||||||||| ||||||||||||||||||| || | ||||||| ||||||    
T  21670189 ttaaaaactaacggagaagaccaaaagaggtaacggaagaagacataagggaccaatttgagacgttttttagtta 21670114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 231 - 299
Target Start/End: Original strand, 13363569 - 13363637
Alignment:
Q  231 ttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgtttt 299  Q
    ||||||| |||||||||||||||| |||||||||   |||| ||||||||||||||||| |||||||||    
T  13363569 ttaaaaactaacggagaggaccaaaagaggtaaccacagaaaacataagggaccaaattgaaacgtttt 13363637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 158 - 254
Target Start/End: Original strand, 36939951 - 36940047
Alignment:
Q  158 tgttgttggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaa 254  Q
    ||||| ||||||| | || |||||||||||| |||||| |||||||||||| ||||| |||| | ||||  ||| ||||||||||||||| ||||||    
T  36939951 tgttggtggttcactattatatacaatggacctgcaatcgaatggttgaaaccatatcaaaattattagatattaaaaaattaacggagatgaccaa 36940047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 178 - 253
Target Start/End: Complemental strand, 7770175 - 7770100
Alignment:
Q  178 atacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggacca 253  Q
    ||||||||||||| ||||  ||||||| |||||| |||||||| ||||| |||| ||||| |||||||||||||||    
T  7770175 atacaatggacatacaatcaaatggttaaaatcacataaaaaaatttagacattaaaaaactaacggagaggacca 7770100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 178 - 253
Target Start/End: Complemental strand, 7777852 - 7777777
Alignment:
Q  178 atacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggacca 253  Q
    ||||||||||||| ||||  ||||||| |||||| |||||||| ||||| |||| ||||| |||||||||||||||    
T  7777852 atacaatggacatacaatcaaatggttaaaatcacataaaaaaatttagacattaaaaaactaacggagaggacca 7777777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 13513537 - 13513470
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    |||||||||||||||| ||||||||| | ||||||||||||||||||| || | ||||||| ||||||    
T  13513537 taacggagaggaccaaaagaggtaacagaagaagacataagggaccaatttgagacgttttttagtta 13513470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 13603070 - 13603003
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    |||||||||||||||| ||||||||| | ||||||||||||||||||| || | ||||||| ||||||    
T  13603070 taacggagaggaccaaaagaggtaacagaagaagacataagggaccaatttgagacgttttttagtta 13603003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 306
Target Start/End: Original strand, 44103287 - 44103362
Alignment:
Q  231 ttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    ||||||| |||||||||||||||| ||||| ||||| |||||||||||| |||||| || | ||||||| ||||||    
T  44103287 ttaaaaactaacggagaggaccaaaagaggaaacggaagaagacataagagaccaatttgagacgttttttagtta 44103362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 42793879 - 42793806
Alignment:
Q  179 tacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggacc 252  Q
    |||||||||||||||||  ||||||| ||||||||| |||| |||||| |||| |||||||||| ||| |||||    
T  42793879 tacaatggacatgcaatccaatggttaaaatcatatcaaaagttttagacattaaaaaattaacagaggggacc 42793806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 299
Target Start/End: Complemental strand, 21961948 - 21961880
Alignment:
Q  231 ttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgtttt 299  Q
    ||||||| |||||||||||||||| |||| |||||| ||||||||||||||| ||| || | |||||||    
T  21961948 ttaaaaactaacggagaggaccaaaagagataacggaagaagacataagggatcaatttgagacgtttt 21961880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 250
Target Start/End: Original strand, 39516435 - 39516507
Alignment:
Q  178 atacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagagga 250  Q
    ||||||||||||||||||  ||||||| |||||| || ||||| ||||| |||| ||||| ||||||||||||    
T  39516435 atacaatggacatgcaatcaaatggttaaaatcacatgaaaaaatttagacattaaaaaactaacggagagga 39516507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 231 - 306
Target Start/End: Original strand, 39325825 - 39325900
Alignment:
Q  231 ttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    ||||||| || | |||| ||| || ||||||||||| |||| |||||||||||||| |||||||||||| ||||||    
T  39325825 ttaaaaactagcagagatgactaaaagaggtaacggaagaaaacataagggaccaatttaaaacgttttttagtta 39325900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 172 - 299
Target Start/End: Original strand, 44607248 - 44607375
Alignment:
Q  172 tgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaatagaggtaacggtagaa 271  Q
    |||| |||||||||||| ||||||| || |||   |||||||| |||||| |||| |||| ||||| |||| ||||||||||| | || ||||||   ||    
T  44607248 tgttatatacaatggacctgcaattcaacggtcataatcatattaaaaatattagacattaaaaaactaactgagaggaccaaaatagataacggcgtaa 44607347  T
Q  272 gacataagggaccaaattaaaacgtttt 299  Q
     ||||||| |||||| |||||| |||||    
T  44607348 tacataagagaccaatttaaaatgtttt 44607375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 10053737 - 10053811
Alignment:
Q  233 aaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagttaa 307  Q
    |||||||||||||||| ||||| ||||||||||  | ||||||||||||||||| || | ||  |||||||||||    
T  10053737 aaaaattaacggagagaaccaaaagaggtaacgacataagacataagggaccaacttgagacactttatagttaa 10053811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 157 - 254
Target Start/End: Original strand, 37473953 - 37474050
Alignment:
Q  157 gtgttgttggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaa 254  Q
    |||||| ||||||| ||| ||||||||||||  |||||| |||||||  |||  |||| |||||| |||| |||| |||||| |||||| ||||||||    
T  37473953 gtgttggtggttcaatgtggtatacaatggatctgcaatcgaatggtcaaaacaatatcaaaaatattagacattaaaaaataaacggacaggaccaa 37474050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 253
Target Start/End: Complemental strand, 7795945 - 7795869
Alignment:
Q  178 atacaatggacatgcaattgaatggttgaaatcatataaaaaat-tttagtcatttaaaaattaacggagaggacca 253  Q
    ||||||||||||| ||||  ||||||| |||||| ||||||||  ||||| |||| ||||| |||||||||||||||    
T  7795945 atacaatggacatacaatcaaatggttaaaatcacataaaaaaaatttagacattaaaaaactaacggagaggacca 7795869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 13367041 - 13367117
Alignment:
Q  231 ttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagttaa 307  Q
    ||||||| |||||||||||||||| | ||  ||||| ||||||  || ||||||||||||||||  |||||||||||    
T  13367041 ttaaaaactaacggagaggaccaaaatagtaaacggcagaagatttatgggaccaaattaaaacactttatagttaa 13367117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 21671264 - 21671328
Alignment:
Q  157 gtgttgttggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaat 221  Q
    |||||| ||| ||||||||||| ||||| ||||||||||  |||||||||||| |||| ||||||    
T  21671264 gtgttggtggctcattgttgtacacaatagacatgcaatcaaatggttgaaattatatcaaaaat 21671328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 250
Target Start/End: Original strand, 36757166 - 36757230
Alignment:
Q  186 gacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagagga 250  Q
    ||||||||||| ||||||| ||||||||| ||||| ||||| |||| ||||| ||| ||||||||    
T  36757166 gacatgcaattaaatggttaaaatcatatcaaaaaatttagacattaaaaaactaatggagagga 36757230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 179 - 254
Target Start/End: Original strand, 8397197 - 8397272
Alignment:
Q  179 tacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaa 254  Q
    |||||||||| ||||||  |||||||||||| |||| |||||| ||| |||||  |||| ||||||||| ||||||    
T  8397197 tacaatggacctgcaatcaaatggttgaaattatatcaaaaatattaatcattataaaactaacggagatgaccaa 8397272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 286
Target Start/End: Complemental strand, 10052229 - 10052174
Alignment:
Q  231 ttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaa 286  Q
    ||||||| ||| ||||| |||||| ||||||||||| ||| |||||||||||||||    
T  10052229 ttaaaaactaaaggagatgaccaaaagaggtaacggcagatgacataagggaccaa 10052174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 253
Target Start/End: Original strand, 22621072 - 22621147
Alignment:
Q  178 atacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggacca 253  Q
    ||||||||||||||||||  |||| || ||||||||| || |||||||  |||| ||||| |||| ||||||||||    
T  22621072 atacaatggacatgcaatcaaatgattaaaatcatatcaagaattttatacattaaaaaactaacagagaggacca 22621147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 429
Target Start/End: Complemental strand, 13995332 - 13995294
Alignment:
Q  391 aacaacataaacaaaagttgtaccaaaatcctcaaacat 429  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  13995332 aacaacataaacaaaagttgtaccaaatccctcaaacat 13995294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 444 - 490
Target Start/End: Complemental strand, 19411682 - 19411636
Alignment:
Q  444 caaaaacaacttccaccacccacattccgctgctcgcacacaacccc 490  Q
    |||||| ||||||||||||| || ||||| |||||||||||||||||    
T  19411682 caaaaaaaacttccaccacctacgttccggtgctcgcacacaacccc 19411636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 362
Target Start/End: Original strand, 29739734 - 29739764
Alignment:
Q  332 taaattaagagaccaaatgatgtattaagcc 362  Q
    |||||||||||||||||||||||||||||||    
T  29739734 taaattaagagaccaaatgatgtattaagcc 29739764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 366
Target Start/End: Complemental strand, 37323373 - 37323339
Alignment:
Q  332 taaattaagagaccaaatgatgtattaagccaaaa 366  Q
    ||||||||| |||||||||||||||||||||||||    
T  37323373 taaattaagggaccaaatgatgtattaagccaaaa 37323339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 255
Target Start/End: Original strand, 45395952 - 45396030
Alignment:
Q  177 tatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaat 255  Q
    |||||||||||||||||||  || |||| ||||| |||||||||| | || |||| | ||| |||||||| ||||||||    
T  45395952 tatacaatggacatgcaatcaaacggttaaaatcgtataaaaaatatcagacattaagaaactaacggagtggaccaat 45396030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 490
Target Start/End: Original strand, 19554753 - 19554798
Alignment:
Q  445 aaaaacaacttccaccacccacattccgctgctcgcacacaacccc 490  Q
    ||||| ||||||||||||  |||||||| |||||||||||||||||    
T  19554753 aaaaaaaacttccaccacttacattccggtgctcgcacacaacccc 19554798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 253
Target Start/End: Complemental strand, 7815222 - 7815146
Alignment:
Q  178 atacaatggacatgcaattgaatggttgaaatcatataaaaaat-tttagtcatttaaaaattaacggagaggacca 253  Q
    |||||||||||||  |||  ||||||| |||||| ||||||||  ||||| |||| ||||| |||||||||||||||    
T  7815222 atacaatggacatagaatcaaatggttaaaatcacataaaaaaaatttagacattaaaaaactaacggagaggacca 7815146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 34616300 - 34616236
Alignment:
Q  190 tgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaa 254  Q
    |||||| |||||||||||||||||| |||||| |||  |||| ||||| ||||||| | ||||||    
T  34616300 tgcaatcgaatggttgaaatcatattaaaaatattaaacattaaaaaactaacggaaatgaccaa 34616236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 332 - 364
Target Start/End: Original strand, 41868007 - 41868039
Alignment:
Q  332 taaattaagagaccaaatgatgtattaagccaa 364  Q
    ||||||||| |||||||||||||||||||||||    
T  41868007 taaattaagggaccaaatgatgtattaagccaa 41868039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 254
Target Start/End: Original strand, 43203215 - 43203291
Alignment:
Q  178 atacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaa 254  Q
    ||||||||||||||||||  |||| || |||| | || ||||| ||||| |||| ||||| |||||||| |||||||    
T  43203215 atacaatggacatgcaatcaaatgtttaaaattaaatcaaaaaatttagacattaaaaaactaacggaggggaccaa 43203291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 2e-44; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 361 - 492
Target Start/End: Original strand, 3301954 - 3302085
Alignment:
Q  361 ccaaaacaaaactaacatcacgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccacc 460  Q
    |||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||  |||||||| ||||||||||    
T  3301954 ccaaaacaaagctaacaccacgatcaacgaaacaacataaacataagttgtaccaaaatcctcaaacatggtcacaactgccacaaaaataacttccacc 3302053  T
Q  461 acccacattccgctgctcgcacacaacccctg 492  Q
    |||||||||||||||||| |||||| ||||||    
T  3302054 acccacattccgctgctcacacacaccccctg 3302085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 379 - 490
Target Start/End: Original strand, 1778124 - 1778235
Alignment:
Q  379 cacgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccaccacccacattccgctgctc 478  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||  |||||||||||||||||||||| |||| || || ||     
T  1778124 cacgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacattgtcacaactgccacaaaaacaacttccaccacctacataccactactg 1778223  T
Q  479 gcacacaacccc 490  Q
    | ||||||||||    
T  1778224 gtacacaacccc 1778235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 361 - 462
Target Start/End: Complemental strand, 39020781 - 39020680
Alignment:
Q  361 ccaaaacaaaactaacatcacgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccacc 460  Q
    |||||||||| |||||| ||| |||||||||||||||||||||||||||||  |||||||||||||||| ||| |||||  |||||||||||||||||||    
T  39020781 ccaaaacaaagctaacaccacaatcaacgaaacaacataaacaaaagttgttacaaaatcctcaaacattgtcacaactgccacaaaaacaacttccacc 39020682  T
Q  461 ac 462  Q
    ||    
T  39020681 ac 39020680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 414 - 492
Target Start/End: Complemental strand, 11698887 - 11698809
Alignment:
Q  414 caaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccaccacccacattccgctgctcgcacacaacccctg 492  Q
    ||||||| |||| ||||||| |||||  ||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  11698887 caaaatcatcaagcatcgtcacaactgccacaaaaacaacttctaccacccacattctgctgctcgcacacaacccctg 11698809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 164 - 289
Target Start/End: Original strand, 13446582 - 13446707
Alignment:
Q  164 tggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaatagaggtaa 263  Q
    ||||||| ||||||||| | |||||||||||| |||||||||||||||||| | |||| |||  |||| ||||| |||||||||||||||||| |   ||    
T  13446582 tggttcactgttgtatatattggacatgcaatcgaatggttgaaatcatatgagaaatgttacacattaaaaaactaacggagaggaccaatataataaa 13446681  T
Q  264 cggtagaagacataagggaccaaatt 289  Q
    ||| ||||||  || |||||||||||    
T  13446682 cggcagaagatttatgggaccaaatt 13446707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 307
Target Start/End: Complemental strand, 35483766 - 35483623
Alignment:
Q  164 tggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaatagaggtaa 263  Q
    ||||||| |||||||||| |||||| ||||||  || ||||||||||| || |||||| |||| |||||||| | |||||||||||||| | |  |||||    
T  35483766 tggttcagtgttgtatacgatggacttgcaatcaaacggttgaaatcaaatcaaaaatattagacatttaaatactaacggagaggaccgaaattggtaa 35483667  T
Q  264 cggtagaagacataagggaccaaattaaaacgttttatagttaa 307  Q
    | | |||| ||| ||| ||||||||| ||||  |||||||||||    
T  35483666 cagaagaatacacaagagaccaaattgaaacactttatagttaa 35483623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 235 - 306
Target Start/End: Complemental strand, 41126360 - 41126289
Alignment:
Q  235 aaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    |||||||||||||||||||| ||||||||||  |||||||||||||||||||||| | ||  ||||||||||    
T  41126360 aaattaacggagaggaccaaaagaggtaacgacagaagacataagggaccaaattgagacactttatagtta 41126289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 182 - 253
Target Start/End: Complemental strand, 41515170 - 41515099
Alignment:
Q  182 aatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggacca 253  Q
    ||||||||||||||  ||||||| ||||||||||||||| ||||| |||| |||||||||||||||| ||||    
T  41515170 aatggacatgcaatcaaatggttaaaatcatataaaaaactttagacattaaaaaattaacggagagaacca 41515099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 182 - 253
Target Start/End: Original strand, 28326332 - 28326403
Alignment:
Q  182 aatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggacca 253  Q
    ||||||||||||||  ||||||| ||||||||| ||||| ||||| |||| ||||| |||||||||||||||    
T  28326332 aatggacatgcaatcaaatggttaaaatcatattaaaaaatttagacattaaaaaactaacggagaggacca 28326403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 30223975 - 30224042
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    |||||||||||||||| ||| ||||||| |||||||||||||||||||||| | ||  ||||||||||    
T  30223975 taacggagaggaccaaaagatgtaacggcagaagacataagggaccaaattgagacaatttatagtta 30224042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 36673835 - 36673902
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    |||| ||||||||||| ||||||||||  |||||||||||||||||||||| | || |||||||||||    
T  36673835 taactgagaggaccaaaagaggtaacgacagaagacataagggaccaaattgagacattttatagtta 36673902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 435 - 489
Target Start/End: Original strand, 29550171 - 29550225
Alignment:
Q  435 caactatcacaaaaacaacttccaccacccacattccgctgctcgcacacaaccc 489  Q
    |||||| ||||||||||||||  |||| |||||||||||||||||||||||||||    
T  29550171 caactaccacaaaaacaacttttaccatccacattccgctgctcgcacacaaccc 29550225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 239 - 289
Target Start/End: Complemental strand, 30222763 - 30222713
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaatt 289  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||||||||    
T  30222763 taacggagaggaccaaaagaggtaacgacagaagacataagggaccaaatt 30222713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 45721691 - 45721776
Alignment:
Q  165 ggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagagga 250  Q
    |||||||| ||  |||||||| |||||||||  ||||||| |||||| |||||||| ||||| |||| ||||| ||||||||||||    
T  45721691 ggttcattattagatacaatgaacatgcaatcaaatggttaaaatcacataaaaaaatttagacattaaaaaactaacggagagga 45721776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 24495042 - 24495118
Alignment:
Q  231 ttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagttaa 307  Q
    ||||||| ||||||||||||||||  |||||||| | ||||||||||||||||||| || | | ||||| |||||||    
T  24495042 ttaaaaactaacggagaggaccaaacgaggtaacagaagaagacataagggaccaatttgagaggttttttagttaa 24495118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 159 - 306
Target Start/End: Complemental strand, 43111630 - 43111479
Alignment:
Q  159 gttgttggttcattgttgtatacaatggacatgcaattg-----aatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggacca 253  Q
    |||| ||||||||||||||||||||| |||||||||| |     |||||||||||| |||| |||||| ||||||| | | ||| ||||||||| || ||    
T  43111630 gttggtggttcattgttgtatacaatagacatgcaatcgaatataatggttgaaattatatcaaaaatattagtcaataataaactaacggagatga-ca 43111532  T
Q  254 atagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    | | ||||||||  | |||||||||| || ||| || | ||||||| ||||||    
T  43111531 aaaaaggtaacgacaaaagacataagtgatcaatttgagacgttttttagtta 43111479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 442 - 485
Target Start/End: Original strand, 47588741 - 47588784
Alignment:
Q  442 cacaaaaacaacttccaccacccacattccgctgctcgcacaca 485  Q
    |||||||||||||||||||||| |||||| ||||||||||||||    
T  47588741 cacaaaaacaacttccaccacctacattctgctgctcgcacaca 47588784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 305
Target Start/End: Complemental strand, 18668888 - 18668814
Alignment:
Q  231 ttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtt 305  Q
    ||||||||||||||| |||||||| | | |||||| ||||| |||||||||||||| || | |||||||| ||||    
T  18668888 ttaaaaattaacggaaaggaccaagataagtaacgatagaatacataagggaccaatttgagacgttttaaagtt 18668814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 289
Target Start/End: Original strand, 34558300 - 34558350
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaatt 289  Q
    ||||||| |||||||| ||||||||||| | ||||||||||||||||||||    
T  34558300 taacggataggaccaaaagaggtaacggcaaaagacataagggaccaaatt 34558350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 289
Target Start/End: Original strand, 41618498 - 41618548
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaatt 289  Q
    |||||||||||||||| ||||||||||  ||||||||||| ||||||||||    
T  41618498 taacggagaggaccaaaagaggtaacgacagaagacataatggaccaaatt 41618548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 285
Target Start/End: Original strand, 44114623 - 44114701
Alignment:
Q  207 aatcatataaaaaattttagtcatttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggacca 285  Q
    |||||||| |||||| | |  |||| ||||| |||||||||||||||| |||||| || |||||||| |||||||||||    
T  44114623 aatcatattaaaaatatgatacattaaaaaactaacggagaggaccaaaagaggtgacagtagaagatataagggacca 44114701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 24494166 - 24494125
Alignment:
Q  168 tcattgttgtatacaatggacatgcaattgaatggttgaaat 209  Q
    ||||||||||||||||| |||||||||| |||||||||||||    
T  24494166 tcattgttgtatacaatagacatgcaatcgaatggttgaaat 24494125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 35296757 - 35296822
Alignment:
Q  182 aatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggaga 247  Q
    ||||||||||||||  || |||| ||||||||| ||||| ||||| |||| |||||||||||||||    
T  35296757 aatggacatgcaatcaaacggttaaaatcatatcaaaaaatttagacattaaaaaattaacggaga 35296822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 445 - 490
Target Start/End: Complemental strand, 40074646 - 40074601
Alignment:
Q  445 aaaaacaacttccaccacccacattccgctgctcgcacacaacccc 490  Q
    ||||||||||||||||| | ||| ||||||||||||||||||||||    
T  40074646 aaaaacaacttccaccaacaacaatccgctgctcgcacacaacccc 40074601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 246
Target Start/End: Original strand, 17288180 - 17288248
Alignment:
Q  178 atacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggag 246  Q
    ||||||||||||||||||  ||| ||| ||||||||| ||||| ||||| |||| ||||| ||||||||    
T  17288180 atacaatggacatgcaatcaaatagttaaaatcatatcaaaaaatttagacattaaaaaactaacggag 17288248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 255
Target Start/End: Original strand, 26146643 - 26146719
Alignment:
Q  179 tacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaat 255  Q
    ||||||||||||||||| |  ||||| ||||||||| ||||| ||||| |||| ||||| |||||||| ||| ||||    
T  26146643 tacaatggacatgcaatcgggtggttaaaatcatatcaaaaagtttagacattaaaaaaataacggaggggatcaat 26146719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 29550122 - 29550166
Alignment:
Q  361 ccaaaacaaaactaacatcacgatcaacgaaacaacataaacaaa 405  Q
    |||||| ||| |||||| |||||||||||||||||||||||||||    
T  29550122 ccaaaataaagctaacaccacgatcaacgaaacaacataaacaaa 29550166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 36933950 - 36933998
Alignment:
Q  442 cacaaaaacaacttccaccacccacattccgctgctcgcacacaacccc 490  Q
    |||| ||||||||||||||||| ||||||  ||||||||||||||||||    
T  36933950 cacagaaacaacttccaccacctacattcaactgctcgcacacaacccc 36933998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 44113554 - 44113478
Alignment:
Q  231 ttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagttaa 307  Q
    ||||||| ||||| || ||||||| | ||||||||| |||| |||||||||||||| || | ||||||| |||||||    
T  44113554 ttaaaaactaacgaagtggaccaaaataggtaacggcagaatacataagggaccaatttgagacgttttttagttaa 44113478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 49162362 - 49162286
Alignment:
Q  231 ttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagttaa 307  Q
    ||||||| ||||| || ||||||| | ||| ||||| |||| |||||||||||||| || ||||||||| |||||||    
T  49162362 ttaaaaactaacgaagtggaccaaaataggaaacggcagaatacataagggaccaattttaaacgttttttagttaa 49162286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 2904046 - 2904113
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    |||||||||||||||| ||||||||||| |||||||||||   || ||||| | || |||||||||||    
T  2904046 taacggagaggaccaaaagaggtaacggcagaagacataacaaactaaattgagacattttatagtta 2904113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 245
Target Start/End: Complemental strand, 32653640 - 32653577
Alignment:
Q  182 aatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacgga 245  Q
    ||||||||||||||  || |||| |||| |||| |||||||||||||||| ||||| |||||||    
T  32653640 aatggacatgcaatcaaacggttaaaatgatatcaaaaattttagtcattaaaaaactaacgga 32653577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 33341415 - 33341348
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    ||||||| |||||||| ||||||||||| | ||||||||| |||||||||| | ||  ||||||||||    
T  33341415 taacggataggaccaaaagaggtaacggcaaaagacataatggaccaaattgagacaatttatagtta 33341348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 243
Target Start/End: Complemental strand, 25532318 - 25532257
Alignment:
Q  182 aatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacg 243  Q
    ||||||| |||||| |||||||||||||||||| |||||| |||  |||| ||||| |||||    
T  25532318 aatggacctgcaatcgaatggttgaaatcatatcaaaaatattaaacattaaaaaactaacg 25532257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 5893294 - 5893246
Alignment:
Q  442 cacaaaaacaacttccaccacccacattccgctgctcgcacacaacccc 490  Q
    |||||||| |||||||||| || |||||||||||||||||  |||||||    
T  5893294 cacaaaaataacttccaccgcctacattccgctgctcgcattcaacccc 5893246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 291
Target Start/End: Complemental strand, 7346031 - 7345979
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaa 291  Q
    ||||||| |||||||| ||||||||||  | |||| |||||||||||||||||    
T  7346031 taacggataggaccaaaagaggtaacgacaaaagaaataagggaccaaattaa 7345979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 90; Significance: 3e-43; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 367 - 492
Target Start/End: Original strand, 250805 - 250930
Alignment:
Q  367 caaaactaacatcacgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccaccacccac 466  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||   |||| ||||||||||||||||| ||    
T  250805 caaagctaacaccacgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacatagtcacaacagccacataaacaacttccaccaccaac 250904  T
Q  467 attccgctgctcgcacacaacccctg 492  Q
    ||||||||||||||||||||||||||    
T  250905 attccgctgctcgcacacaacccctg 250930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 442 - 487
Target Start/End: Complemental strand, 47781 - 47736
Alignment:
Q  442 cacaaaaacaacttccaccacccacattccgctgctcgcacacaac 487  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  47781 cacaaaaacaacttccaccacctacattccgctgctcgcacacaac 47736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 3e-43; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 367 - 492
Target Start/End: Complemental strand, 14566570 - 14566445
Alignment:
Q  367 caaaactaacatcacgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccaccacccac 466  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||   |||| ||||||||||||||||| ||    
T  14566570 caaagctaacaccacgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacatagtcacaacagccacataaacaacttccaccaccaac 14566471  T
Q  467 attccgctgctcgcacacaacccctg 492  Q
    ||||||||||||||||||||||||||    
T  14566470 attccgctgctcgcacacaacccctg 14566445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 363 - 492
Target Start/End: Complemental strand, 23054866 - 23054737
Alignment:
Q  363 aaaacaaaactaacatcacgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccaccac 462  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |  | ||||  |||||||||||||||||||||    
T  23054866 aaaacaaagctaacaccacgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacattgctgaaactgccacaaaaacaacttccaccac 23054767  T
Q  463 ccacattccgctgctcgcacacaacccctg 492  Q
    |||||||||| ||||||||||||| |||||    
T  23054766 ccacattccggtgctcgcacacaaaccctg 23054737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 153 - 286
Target Start/End: Complemental strand, 2292353 - 2292220
Alignment:
Q  153 ttaagtgttgttggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggacc 252  Q
    |||||||||| ||| |||||||||||   ||| ||||||||||   ||||||||||| |||| |||||| ||||||||| ||||| |||| |||||||||    
T  2292353 ttaagtgttggtggctcattgttgtacgtaatagacatgcaatctgatggttgaaattatatcaaaaatattagtcattaaaaaactaacagagaggacc 2292254  T
Q  253 aatagaggtaacggtagaagacataagggaccaa 286  Q
    || ||||||||||| |||||||||||||||||||    
T  2292253 aagagaggtaacggaagaagacataagggaccaa 2292220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 394 - 479
Target Start/End: Original strand, 6409574 - 6409659
Alignment:
Q  394 aacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccaccacccacattccgctgctcg 479  Q
    ||||||||||||||||| ||||||||||||||||||| || |||||  |||||||||||||||||||||| |||||||||||||||    
T  6409574 aacataaacaaaagttgcaccaaaatcctcaaacatcatcacaactgccacaaaaacaacttccaccacctacattccgctgctcg 6409659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 43895534 - 43895652
Alignment:
Q  157 gtgttgttggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaata 256  Q
    |||||| ||||||||||||||||||||| | ||||||||||||||||| |||| | || |||||| |||| |||| ||||||||||||||| |||||| |    
T  43895534 gtgttgatggttcattgttgtatacaatagtcatgcaattgaatggttaaaattacatcaaaaatattagacattaaaaaattaacggagatgaccaaaa 43895633  T
Q  257 gaggtaacggtagaagaca 275  Q
     || |||||  ||||||||    
T  43895634 tagataacgagagaagaca 43895652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 361 - 492
Target Start/End: Original strand, 53201789 - 53201910
Alignment:
Q  361 ccaaaacaaaactaacatcacgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccacc 460  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||            ||||||| ||||||| |||||  ||||||||||||||| |||    
T  53201789 ccaaaacaaagctaacatcacgatcaacaaaacaacataaacaaaa------------tcctcaagcatcgtcacaactgccacaaaaacaacttctacc 53201876  T
Q  461 ac--ccacattccgctgctcgcacacaacccctg 492  Q
    ||  ||||||||||||||||||||||||||||||    
T  53201877 acacccacattccgctgctcgcacacaacccctg 53201910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 231 - 306
Target Start/End: Original strand, 36604832 - 36604907
Alignment:
Q  231 ttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    ||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||| |||| ||||||| ||||||    
T  36604832 ttaaaaactaacggagaggaccaaaagaggtaacggaagaagacataagggaccaatttaagacgttttttagtta 36604907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 361 - 492
Target Start/End: Complemental strand, 34227578 - 34227459
Alignment:
Q  361 ccaaaacaaaactaacatcacgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccacc 460  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||            ||||||| ||||||| |||||  ||||||||||||||| |||    
T  34227578 ccaaaacaaagctaacaccacgatcaacgaaacaacataaacaaaa------------tcctcaagcatcgtcacaactgccacaaaaacaacttctacc 34227491  T
Q  461 acccacattccgctgctcgcacacaacccctg 492  Q
    |||||||||  ||| |||||||||||||||||    
T  34227490 acccacattttgctactcgcacacaacccctg 34227459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 158 - 307
Target Start/End: Complemental strand, 43418231 - 43418082
Alignment:
Q  158 tgttgttggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaatag 257  Q
    ||||| ||||||| |||||||||| |||||| ||||||  |||||||||||||| || |||||| |||| |||| ||| | ||||||||| |||| | |     
T  43418231 tgttggtggttcagtgttgtatacgatggacttgcaatcaaatggttgaaatcaaatcaaaaatattagacattaaaatactaacggagatgaccgaaat 43418132  T
Q  258 aggtaacggtagaagacataagggaccaaattaaaacgttttatagttaa 307  Q
    || |||| | |||| ||||||||| ||||||| ||||  |||||||||||    
T  43418131 agataacagaagaatacataaggggccaaattgaaacactttatagttaa 43418082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 230 - 306
Target Start/End: Original strand, 2293515 - 2293591
Alignment:
Q  230 tttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    |||||||| ||||||||||||||||||||| | |||| ||||||||||||||||||| |||| ||||||| ||||||    
T  2293515 tttaaaaactaacggagaggaccaatagagattacggaagaagacataagggaccaatttaagacgttttttagtta 2293591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 394 - 490
Target Start/End: Original strand, 19657905 - 19658001
Alignment:
Q  394 aacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaa-ctatcacaaaaacaacttccaccacccacattccgctgctcgcacacaacccc 490  Q
    |||||||| ||||||||||||||| |||||||||||| || ||| ||  ||||||||||||||||| ||   ||||||||||||||||||||||||||    
T  19657905 aacataaagaaaagttgtaccaaattcctcaaacatcatcacaagctgccacaaaaacaacttcca-caattacattccgctgctcgcacacaacccc 19658001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 306
Target Start/End: Original strand, 46795964 - 46796092
Alignment:
Q  178 atacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaatagaggtaacggtagaagacata 277  Q
    ||||||||||||||||||  ||||||| ||||||||| ||||| ||||| |||| ||||| |||||||||||||||  | ||  |||||  |||||| ||    
T  46795964 atacaatggacatgcaatcaaatggttaaaatcatatcaaaaaatttagacattaaaaaactaacggagaggaccacaatagtaaacggaggaagactta 46796063  T
Q  278 agggaccaaattaaaacgttttatagtta 306  Q
     ||||||||||| | ||  ||||||||||    
T  46796064 tgggaccaaattgagacactttatagtta 46796092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 363 - 471
Target Start/End: Complemental strand, 31360645 - 31360549
Alignment:
Q  363 aaaacaaaactaacatcacgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccaccac 462  Q
    |||||||||||||||||||||||||||| |||||||||||            |||||| |||||||||||| ||| || ||||||||||||||| |||||    
T  31360645 aaaacaaaactaacatcacgatcaacgacacaacataaac------------aaaatcttcaaacatcgtcacaattaccacaaaaacaacttctaccac 31360558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 414 - 492
Target Start/End: Complemental strand, 47518995 - 47518917
Alignment:
Q  414 caaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccaccacccacattccgctgctcgcacacaacccctg 492  Q
    ||||| |||||| ||||| | |||||  ||||||||||||||| ||||||||||||| |||||||||||||||| ||||    
T  47518995 caaaaacctcaagcatcgccacaactgccacaaaaacaacttctaccacccacattctgctgctcgcacacaactcctg 47518917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 442 - 487
Target Start/End: Original strand, 14791950 - 14791995
Alignment:
Q  442 cacaaaaacaacttccaccacccacattccgctgctcgcacacaac 487  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  14791950 cacaaaaacaacttccaccacctacattccgctgctcgcacacaac 14791995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 445 - 489
Target Start/End: Original strand, 50589289 - 50589333
Alignment:
Q  445 aaaaacaacttccaccacccacattccgctgctcgcacacaaccc 489  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  50589289 aaaaacaacttccaccacccacaatccgctgctcgcacacaaccc 50589333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 178 - 253
Target Start/End: Complemental strand, 47667356 - 47667281
Alignment:
Q  178 atacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggacca 253  Q
    ||||||||||||||||||  ||||||| |||||| |||||||| ||||| |||| ||||| ||||| |||||||||    
T  47667356 atacaatggacatgcaatcaaatggttaaaatcacataaaaaaatttagacattaaaaaactaacgcagaggacca 47667281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 29686379 - 29686305
Alignment:
Q  233 aaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagttaa 307  Q
    |||||||||||||||||||||| ||||||||||  | ||||||||||||||||| || | ||  |||||||||||    
T  29686379 aaaaattaacggagaggaccaaaagaggtaacgacataagacataagggaccaatttgagacaatttatagttaa 29686305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 178 - 247
Target Start/End: Original strand, 29665512 - 29665581
Alignment:
Q  178 atacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggaga 247  Q
    ||||||||||||||||||  ||||||| |||||| || ||||| ||||| |||| |||||||||||||||    
T  29665512 atacaatggacatgcaatcaaatggttaaaatcacatcaaaaaatttagacattaaaaaattaacggaga 29665581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 33296525 - 33296484
Alignment:
Q  81 atatgaacttaatgattaaaatgatgaagattaagaggaaga 122  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  33296525 atatgaacttaatgattaagatgatgaagattaagaggaaga 33296484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 2310781 - 2310848
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    ||||||| |||| ||| ||||||||||| | |||||||||||||||||||| | || |||||||||||    
T  2310781 taacggataggatcaaaagaggtaacggcaaaagacataagggaccaaattgagacattttatagtta 2310848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 36604573 - 36604490
Alignment:
Q  223 ttagtcatttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    ||||||| | ||||| ||||||||| || ||| ||||||||||  | ||||||||||||||||| |||| ||||||| ||||||    
T  36604573 ttagtcaataaaaaactaacggagatgatcaaaagaggtaacgacaaaagacataagggaccaatttaagacgttttttagtta 36604490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 38417752 - 38417657
Alignment:
Q  157 gtgttgttggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggacc 252  Q
    |||||| ||| ||| ||||||||||||||||| ||||||  || |||||||||||||| ||||| | ||  |||| ||| | ||||||||||||||    
T  38417752 gtgttgatgggtcagtgttgtatacaatggacctgcaatcaaacggttgaaatcatattaaaaaatctaaacattaaaatactaacggagaggacc 38417657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 329 - 371
Target Start/End: Original strand, 27410769 - 27410811
Alignment:
Q  329 aattaaattaagagaccaaatgatgtattaagccaaaacaaaa 371  Q
    |||||| ||||||||||||||||||||||||||||||| ||||    
T  27410769 aattaagttaagagaccaaatgatgtattaagccaaaaaaaaa 27410811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 3528368 - 3528295
Alignment:
Q  178 atacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggac 251  Q
    ||||||||||||||||||  ||||||| |||||| ||||||||  |||| |||| ||||| ||| |||||||||    
T  3528368 atacaatggacatgcaatcaaatggttaaaatcacataaaaaaaattagacattaaaaaactaatggagaggac 3528295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 394 - 427
Target Start/End: Complemental strand, 24958142 - 24958109
Alignment:
Q  394 aacataaacaaaagttgtaccaaaatcctcaaac 427  Q
    ||||||||||||||||||||||||||||||||||    
T  24958142 aacataaacaaaagttgtaccaaaatcctcaaac 24958109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 244 - 289
Target Start/End: Original strand, 30672068 - 30672113
Alignment:
Q  244 gagaggaccaatagaggtaacggtagaagacataagggaccaaatt 289  Q
    ||||||||||| | ||||||||| ||||||||||||||||||||||    
T  30672068 gagaggaccaaaacaggtaacggcagaagacataagggaccaaatt 30672113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 229 - 306
Target Start/End: Complemental strand, 52880941 - 52880864
Alignment:
Q  229 atttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    ||||||||  ||||||| |||||||| ||||||||||| | ||||||||| |||||||||| | ||  ||||||||||    
T  52880941 atttaaaatgtaacggataggaccaaaagaggtaacggcaaaagacataaaggaccaaattgagacactttatagtta 52880864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 302
Target Start/End: Complemental strand, 29833489 - 29833426
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttata 302  Q
    |||||||||||||||| ||||||||||  | |||| ||||||||||||||| | || |||||||    
T  29833489 taacggagaggaccaaaagaggtaacgacaaaagatataagggaccaaattgagacattttata 29833426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 253
Target Start/End: Complemental strand, 41348417 - 41348342
Alignment:
Q  178 atacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggacca 253  Q
    ||||||||||||||||||  |||| || ||||||||| ||||||||||  |||| ||||| |||  ||||||||||    
T  41348417 atacaatggacatgcaatcaaatgattaaaatcatatcaaaaattttatacattaaaaaactaatagagaggacca 41348342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 253
Target Start/End: Original strand, 56001207 - 56001281
Alignment:
Q  178 atacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggacca 253  Q
    ||||||||||||||||||  ||||||| |||||| ||||||||  |||| |||| ||||| ||||| |||||||||    
T  56001207 atacaatggacatgcaatcaaatggttaaaatcacataaaaaa-attagacattaaaaaactaacgaagaggacca 56001281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 306
Target Start/End: Original strand, 18358373 - 18358439
Alignment:
Q  240 aacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    |||||||| || ||| ||||||||||  | ||||||||||||||||| |||| ||||||| ||||||    
T  18358373 aacggagatgatcaaaagaggtaacgacaaaagacataagggaccaatttaagacgttttttagtta 18358439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 239 - 289
Target Start/End: Complemental strand, 19048992 - 19048942
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaatt 289  Q
    ||||||| |||||||| |||| |||||| | ||||||||||||||||||||    
T  19048992 taacggataggaccaaaagagataacggcaaaagacataagggaccaaatt 19048942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 442 - 492
Target Start/End: Complemental strand, 24958105 - 24958055
Alignment:
Q  442 cacaaaaacaacttccaccacccacattccgctgctcgcacacaacccctg 492  Q
    |||||||||||||||||||||| |||||  | ||||||| |||||||||||    
T  24958105 cacaaaaacaacttccaccacctacattatgttgctcgctcacaacccctg 24958055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 392 - 430
Target Start/End: Original strand, 26677293 - 26677331
Alignment:
Q  392 acaacataaacaaaagttgtaccaaaatcctcaaacatc 430  Q
    ||||||||||||||||||||||||||  |||||||||||    
T  26677293 acaacataaacaaaagttgtaccaaatccctcaaacatc 26677331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 239 - 289
Target Start/End: Original strand, 29834431 - 29834481
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaatt 289  Q
    |||| |||| |||||| ||||||||||| ||||||||||||||| ||||||    
T  29834431 taacagagatgaccaaaagaggtaacggcagaagacataagggatcaaatt 29834481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 307
Target Start/End: Original strand, 34439577 - 34439727
Alignment:
Q  157 gtgttgttggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaata 256  Q
    |||||| |||||||  |||  ||||||||| ||| ||||  ||||| |||||||||||   |||| |||  ||||  |||| ||||||||| |||||| |    
T  34439577 gtgttggtggttcaccgttacatacaatggtcattcaatctaatggctgaaatcatatttgaaatattatacattagaaaactaacggagatgaccaaaa 34439676  T
Q  257 gaggtaacggtagaagacataagggaccaaattaaaacgttttatagttaa 307  Q
     ||  ||||| ||||||  || ||||||||||| |||| ||||||||||||    
T  34439677 tagtaaacggcagaagatttatgggaccaaattgaaacattttatagttaa 34439727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 305
Target Start/End: Complemental strand, 44655846 - 44655772
Alignment:
Q  231 ttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtt 305  Q
    ||||||||||| ||| |||||||| | | |||||| ||||| |||||||||||||| || | |||||||| ||||    
T  44655846 ttaaaaattaatggaaaggaccaagataagtaacgatagaatacataagggaccaatttgagacgttttaaagtt 44655772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 247
Target Start/End: Complemental strand, 52137603 - 52137538
Alignment:
Q  182 aatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggaga 247  Q
    ||||||||||||||  || |||| ||||||||| ||||| ||||| |||| ||||| |||||||||    
T  52137603 aatggacatgcaatcaaacggttaaaatcatatcaaaaaatttagacattgaaaaactaacggaga 52137538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 307
Target Start/End: Complemental strand, 936333 - 936265
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagttaa 307  Q
    ||||||||| || ||| |||||||||   ||||||||||||||| ||||||||||   |||||||||||    
T  936333 taacggagatgatcaaaagaggtaacaacagaagacataagggatcaaattaaaatactttatagttaa 936265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 12887997 - 12888045
Alignment:
Q  442 cacaaaaacaacttccaccacccacattccgctgctcgcacacaacccc 490  Q
    |||||||||||||||| || || |||||||| ||||||||||| |||||    
T  12887997 cacaaaaacaacttcctccccctacattccgttgctcgcacaccacccc 12888045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 17494252 - 17494176
Alignment:
Q  231 ttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagttaa 307  Q
    ||||||| |||||||||  ||||||| ||  ||||| | |||||||||| ||||||||||||||  || ||||||||    
T  17494252 ttaaaaagtaacggagataaccaatatagtaaacggcataagacataagagaccaaattaaaacacttaatagttaa 17494176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 489
Target Start/End: Complemental strand, 28149650 - 28149606
Alignment:
Q  445 aaaaacaacttccaccacccacattccgctgctcgcacacaaccc 489  Q
    ||||||||||||||||||| ||| || | ||||||||||||||||    
T  28149650 aaaaacaacttccaccacctacaatcagttgctcgcacacaaccc 28149606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 157 - 294
Target Start/End: Original strand, 24732 - 24869
Alignment:
Q  157 gtgttgttggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaata 256  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||| |||| |||| ||||| ||||||||| |||||| |    
T  24732 gtgttggtggttcattgttgtatacaatagacatgcaattgaatggttaaaatcacataaaaaatattagacattaaaaaactaacggagatgaccaaaa 24831  T
Q  257 gaggtaacggtagaagacataagggaccaaattaaaac 294  Q
     |||||||||  ||||||||||||||||||||| ||||    
T  24832 taggtaacggaggaagacataagggaccaaattgaaac 24869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 3e-37; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 361 - 492
Target Start/End: Complemental strand, 18270307 - 18270177
Alignment:
Q  361 ccaaaacaaaactaacatcacgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccacc 460  Q
    ||||||| || |||||| ||||||||||||||||||||||||  | ||||||||||||||||||||||||||| |||| | |||||||| ||||| ||||    
T  18270307 ccaaaaccaagctaacagcacgatcaacgaaacaacataaacttatgttgtaccaaaatcctcaaacatcgtcacaac-accacaaaaataactttcacc 18270209  T
Q  461 acccacattccgctgctcgcacacaacccctg 492  Q
    ||||| ||||||||||||||||||||||||||    
T  18270208 acccatattccgctgctcgcacacaacccctg 18270177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 361 - 487
Target Start/End: Complemental strand, 893536 - 893410
Alignment:
Q  361 ccaaaacaaaactaacatcacgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccacc 460  Q
    |||||||||| |||||| ||||||||| |||| |||||||| |||||||||||||||||| | |||||||||| |||||  ||  |||||||||||||||    
T  893536 ccaaaacaaagctaacaccacgatcaatgaaaaaacataaataaaagttgtaccaaaatctttaaacatcgtcacaactgccatcaaaacaacttccacc 893437  T
Q  461 acccacattccgctgctcgcacacaac 487  Q
    |||||||||||||||||||||||||||    
T  893436 acccacattccgctgctcgcacacaac 893410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 362 - 466
Target Start/End: Original strand, 43275477 - 43275581
Alignment:
Q  362 caaaacaaaactaacatcacgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccacca 461  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |  ||||||||||||||||||||    
T  43275477 caaaacaaagctaacaccacgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacattgtcacaagtgccacaaaaacaacttccacca 43275576  T
Q  462 cccac 466  Q
    |||||    
T  43275577 cccac 43275581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 15330 - 15259
Alignment:
Q  8 ttcttcatatctgattatcttattccatacggctgttttaaaagttgaattggagatttaaccagcaataag 79  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  15330 ttcttcagatctgattatcttattccatacgggtgttttaaaagttgaattggagatttaaccagcaataag 15259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 157 - 289
Target Start/End: Complemental strand, 17345509 - 17345378
Alignment:
Q  157 gtgttgttggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaata 256  Q
    |||||| ||||| ||||||||||||||| |||||||||| |||||||| ||||||||| |||||| |||| |||| ||||| |||||||||||||||| |    
T  17345509 gtgttggtggtttattgttgtatacaatagacatgcaatcgaatggttcaaatcatattaaaaatattagacattaaaaaactaacggagaggaccaa-a 17345411  T
Q  257 gaggtaacggtagaagacataagggaccaaatt 289  Q
     ||||||| | ||||||  ||||| ||||||||    
T  17345410 aaggtaacagaagaagatttaaggaaccaaatt 17345378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 361 - 470
Target Start/End: Complemental strand, 3576909 - 3576801
Alignment:
Q  361 ccaaaacaaaactaacatcacgatcaacgaaacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaactatcacaaaaacaacttccacc 460  Q
    ||||||| || |||||| ||||||||||||||||||||||||| | ||||||| ||||||||||||| ||||| |||| | |||||||||||||| ||||    
T  3576909 ccaaaaccaagctaacagcacgatcaacgaaacaacataaacatatgttgtactaaaatcctcaaacgtcgtcacaac-accacaaaaacaactttcacc 3576811  T
Q  461 acccacattc 470  Q
    ||||| ||||    
T  3576810 acccatattc 3576801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 157 - 306
Target Start/End: Complemental strand, 26797518 - 26797369
Alignment:
Q  157 gtgttgttggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaata 256  Q
    |||||| |||| |||||||||||||||||||| ||||||  |||||||||||| |||| |||||| ||| |||||  |||| ||||||||||| |||| |    
T  26797518 gtgttgatggtccattgttgtatacaatggacctgcaatcaaatggttgaaattatatcaaaaatattaatcattagaaaactaacggagagggccaaga 26797419  T
Q  257 gaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
     ||||||||| | || |||||||| ||||| || | ||||||| ||||||    
T  26797418 taggtaacggcataatacataaggaaccaatttgagacgttttttagtta 26797369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 391 - 490
Target Start/End: Original strand, 14993528 - 14993627
Alignment:
Q  391 aacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaa-ctatcacaaaaacaacttccaccacccacattccgctgctcgcacacaaccc 489  Q
    |||||||||||||||||||||||||||  ||||||||||| || ||| |  |||||||||||||||||||||   |||||||||||||||||||||||||    
T  14993528 aacaacataaacaaaagttgtaccaaatccctcaaacatcatcacaagccgtcacaaaaacaacttccacca-ttacattccgctgctcgcacacaaccc 14993626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 231 - 306
Target Start/End: Original strand, 7483516 - 7483591
Alignment:
Q  231 ttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    ||||||| ||||||||| |||||| ||||||||||| ||||||||||||||||||| |||| ||||||| ||||||    
T  7483516 ttaaaaactaacggagatgaccaaaagaggtaacggaagaagacataagggaccaatttaagacgttttttagtta 7483591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 7921570 - 7921689
Alignment:
Q  167 ttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaatagaggtaacgg 266  Q
    |||| ||||||||||| | |||   |||| |||||||||||||||||| |||||| |||| |||| ||||| |||||||||||| ||| | ||||||||     
T  7921570 ttcactgttgtatacagtagaccgacaatcgaatggttgaaatcatatcaaaaatattagacattaaaaaactaacggagaggatcaaaataggtaacga 7921669  T
Q  267 tagaagacataagggaccaa 286  Q
     | || ||||||||||||||    
T  7921670 cacaatacataagggaccaa 7921689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 231 - 306
Target Start/End: Original strand, 17350093 - 17350168
Alignment:
Q  231 ttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    ||||||| |||||||||||||||| ||||||||| | |||||||||||||||||||||| | ||  ||||||||||    
T  17350093 ttaaaaactaacggagaggaccaaaagaggtaacaggagaagacataagggaccaaattgagacactttatagtta 17350168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 164 - 254
Target Start/End: Original strand, 32980376 - 32980466
Alignment:
Q  164 tggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaa 254  Q
    ||||||| | ||||||| ||||||| |||||| |||||||||||||||||| |||||| ||||  ||| ||||| ||||||||| ||||||    
T  32980376 tggttcactattgtatataatggacctgcaatcgaatggttgaaatcatatcaaaaatgttagaaattaaaaaactaacggagatgaccaa 32980466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 25498552 - 25498600
Alignment:
Q  442 cacaaaaacaacttccaccacccacattccgctgctcgcacacaacccc 490  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  25498552 cacaaaaacaacttccaccacctacattctgctgctcgcacacaacccc 25498600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 32973256 - 32973189
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    ||||||||||||| || ||||||||||| |||||||||||||||||||||| | ||  ||||||||||    
T  32973256 taacggagaggacaaaaagaggtaacggcagaagacataagggaccaaattgagacactttatagtta 32973189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 32974222 - 32974289
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    ||||||||| |||||| ||||||||||| |||||||||||||||||||||| | ||  ||||||||||    
T  32974222 taacggagatgaccaaaagaggtaacggcagaagacataagggaccaaattgagacactttatagtta 32974289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 306
Target Start/End: Complemental strand, 39133142 - 39133067
Alignment:
Q  231 ttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    ||||||| |||| ||||||||||| ||||||||||  |||||||||||||||||||||| | ||  ||||||||||    
T  39133142 ttaaaaactaacagagaggaccaaaagaggtaacgagagaagacataagggaccaaattgagacactttatagtta 39133067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 48035323 - 48035390
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    |||||||||||||||| ||||||||||| | |||||||||||||||||||| | ||  ||||||||||    
T  48035323 taacggagaggaccaaaagaggtaacggcataagacataagggaccaaattgagacactttatagtta 48035390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 52293522 - 52293589
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    |||||||||||||||| |||||||||| |||||||||||| |||||||||| | ||  ||||||||||    
T  52293522 taacggagaggaccaaaagaggtaacgatagaagacataaaggaccaaattgagacactttatagtta 52293589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 53048014 - 53047947
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    |||||||||||||||| ||||||||||  |||||||||||||||||||||| | ||  ||||||||||    
T  53048014 taacggagaggaccaaaagaggtaacgacagaagacataagggaccaaattgagacactttatagtta 53047947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 53049036 - 53049103
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    |||||||||||||||| ||||||||||  |||||||||||||||||||||| | ||  ||||||||||    
T  53049036 taacggagaggaccaaaagaggtaacgacagaagacataagggaccaaattgagacactttatagtta 53049103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 391 - 491
Target Start/End: Complemental strand, 27741708 - 27741608
Alignment:
Q  391 aacaacataaacaaaagttgtaccaaaatcctcaaacatcgtcgcaa-ctatcacaaaaacaacttccaccacccacattccgctgctcgcacacaaccc 489  Q
    ||||||||||||||||||||||| |||  ||||||||||| || |||  |  |||||||||||| |||||||   |||||||| ||||||||||||||||    
T  27741708 aacaacataaacaaaagttgtactaaatccctcaaacatcatcacaagttgccacaaaaacaacatccacca-ttacattccgttgctcgcacacaaccc 27741610  T
Q  490 ct 491  Q
    ||    
T  27741609 ct 27741608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 47766889 - 47766962
Alignment:
Q  178 atacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggac 251  Q
    ||||||||||||||||||  ||||||| |||||| |||||||| ||||| |||| ||||| ||||| |||||||    
T  47766889 atacaatggacatgcaatcaaatggttaaaatcacataaaaaaatttagacattaaaaaactaacgcagaggac 47766962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 17114018 - 17113970
Alignment:
Q  442 cacaaaaacaacttccaccacccacattccgctgctcgcacacaacccc 490  Q
    ||||||| |||||||||| ||| ||||||||||||||||||||||||||    
T  17114018 cacaaaagcaacttccactacctacattccgctgctcgcacacaacccc 17113970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 247 - 306
Target Start/End: Complemental strand, 1301141 - 1301082
Alignment:
Q  247 aggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    |||||||| ||||||||||||| |||||||||||||||||||| | ||  ||||||||||    
T  1301141 aggaccaaaagaggtaacggtaaaagacataagggaccaaattgagacactttatagtta 1301082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 39287587 - 39287520
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    |||||||||||||||| ||||||||||  |||| ||||||||||||||||| | ||  ||||||||||    
T  39287587 taacggagaggaccaaaagaggtaacgacagaaaacataagggaccaaattgagacactttatagtta 39287520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 231 - 306
Target Start/End: Complemental strand, 40501933 - 40501858
Alignment:
Q  231 ttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    |||||| |||||||| | |||||| ||||||||||| | |||||||||||||||||||| | |  |||||||||||    
T  40501933 ttaaaatttaacggataagaccaaaagaggtaacggcaaaagacataagggaccaaattgagatattttatagtta 40501858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 289
Target Start/End: Complemental strand, 11482018 - 11481968
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaatt 289  Q
    ||||||| |||||||| ||||||||||| | ||||||||||||||||||||    
T  11482018 taacggataggaccaaaagaggtaacggcaaaagacataagggaccaaatt 11481968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 48253111 - 48253042
Alignment:
Q  178 atacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggaga 247  Q
    ||||||||||||||||||  ||||||| |||||| || ||||| ||||| |||| ||||| |||||||||    
T  48253111 atacaatggacatgcaatcaaatggttaaaatcacatcaaaaaatttagacattaaaaaactaacggaga 48253042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 8372558 - 8372622
Alignment:
Q  182 aatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggag 246  Q
    ||||||| |||||| |||||||||||||||||| |||||| |||  |||| ||||| ||||||||    
T  8372558 aatggacctgcaatcgaatggttgaaatcatatcaaaaatattaaacattaaaaaactaacggag 8372622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 5416315 - 5416248
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    |||||||  ||||||| ||||||||||  | |||||||||||||||||||| | || |||||||||||    
T  5416315 taacggatgggaccaaaagaggtaacgacaaaagacataagggaccaaattgagacattttatagtta 5416248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 7583587 - 7583520
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    ||||||| | |||||| ||||||||||||| |||||||||| ||||||||| | ||  ||||||||||    
T  7583587 taacggatatgaccaaaagaggtaacggtaaaagacataagagaccaaattgagacactttatagtta 7583520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 306
Target Start/End: Complemental strand, 25583239 - 25583164
Alignment:
Q  231 ttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgttttatagtta 306  Q
    |||||||||||| ||||||||||| | ||  ||||| ||||||| || ||||||||||| | |||||| |||||||    
T  25583239 ttaaaaattaacagagaggaccaaaatagtaaacggcagaagacttatgggaccaaattgagacgtttaatagtta 25583164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 239 - 289
Target Start/End: Original strand, 7821985 - 7822035
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaatt 289  Q
    ||||||| || ||||| ||||||||||| | ||||||||||||||||||||    
T  7821985 taacggatagtaccaaaagaggtaacggcaaaagacataagggaccaaatt 7822035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 7271529 - 7271602
Alignment:
Q  178 atacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggac 251  Q
    ||||||||||||||||||  ||||||| |||| | || ||||| ||||| |||| ||||| |||||||| ||||    
T  7271529 atacaatggacatgcaatcaaatggttaaaattaaatcaaaaagtttagacattaaaaaactaacggaggggac 7271602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 10339914 - 10339995
Alignment:
Q  165 ggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggag 246  Q
    |||||| ||||  ||||||||||||| ||||  ||||||| |||||| || ||||| ||||| |||| ||||| ||||||||    
T  10339914 ggttcactgttaaatacaatggacattcaatcaaatggttcaaatcaaatcaaaaaatttagacattaaaaaactaacggag 10339995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 247
Target Start/End: Complemental strand, 14744240 - 14744175
Alignment:
Q  182 aatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggaga 247  Q
    ||||||||||||||  |  |||| ||||||||| ||||| ||||| |||| |||||||||||||||    
T  14744240 aatggacatgcaatcaatcggttaaaatcatatcaaaaaatttagacattaaaaaattaacggaga 14744175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 254
Target Start/End: Original strand, 19252919 - 19253016
Alignment:
Q  157 gtgttgttggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaa 254  Q
    |||||| ||||||| ||  ||||| ||||||| ||||||  ||||||  |||  ||||||||||| |||| |||| |||||| |||||| ||||||||    
T  19252919 gtgttggtggttcaatgcggtatataatggacttgcaatcaaatggtcaaaacaatataaaaaatattagacattaaaaaataaacggacaggaccaa 19253016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 336 - 364
Target Start/End: Original strand, 26799001 - 26799029
Alignment:
Q  336 ttaagagaccaaatgatgtattaagccaa 364  Q
    |||||||||||||||||||||||||||||    
T  26799001 ttaagagaccaaatgatgtattaagccaa 26799029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 157 - 294
Target Start/End: Complemental strand, 11905 - 11768
Alignment:
Q  157 gtgttgttggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaata 256  Q
    |||||| |||||||||||||||||||||  ||||||||| |||||||| |||||| || |||||| |||| |||| ||||| |||||||||||||||| |    
T  11905 gtgttggtggttcattgttgtatacaataaacatgcaatcgaatggttaaaatcacatcaaaaatattagacattaaaaaactaacggagaggaccaaaa 11806  T
Q  257 gaggtaacggtagaagacataagggaccaaattaaaac 294  Q
     ||||||| | |||||||||||||||||||||| ||||    
T  11805 taggtaactggagaagacataagggaccaaattgaaac 11768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 404 - 490
Target Start/End: Original strand, 54030 - 54117
Alignment:
Q  404 aaagttgtaccaaaatcctcaaacatcgtcgcaa-ctatcacaaaaacaacttccaccacccacattccgctgctcgcacacaacccc 490  Q
    ||||||||||||||| ||||||||||| || ||| ||  || ||||||||||||||||||| ||||| ||||||||||||| ||||||    
T  54030 aaagttgtaccaaaaccctcaaacatcatcacaagctgacagaaaaacaacttccaccacctacatttcgctgctcgcacataacccc 54117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 239 - 289
Target Start/End: Complemental strand, 1872 - 1822
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaatt 289  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||||||||    
T  1872 taacggagaggaccaaaagaggtaacgacagaagacataagggaccaaatt 1822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 299
Target Start/End: Original strand, 207789 - 207857
Alignment:
Q  231 ttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaaaacgtttt 299  Q
    ||||||| |||||||||||||||| |||| |||||| ||||||||||||||| ||| || | |||||||    
T  207789 ttaaaaactaacggagaggaccaaaagagataacggaagaagacataagggatcaatttgagacgtttt 207857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 490
Target Start/End: Complemental strand, 79566 - 79521
Alignment:
Q  445 aaaaacaacttccaccacccacattccgctgctcgcacacaacccc 490  Q
    |||||||||||||||| || | | ||||||||||||||||||||||    
T  79566 aaaaacaacttccaccgcctataatccgctgctcgcacacaacccc 79521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 291
Target Start/End: Original strand, 458459 - 458511
Alignment:
Q  239 taacggagaggaccaatagaggtaacggtagaagacataagggaccaaattaa 291  Q
    |||||||||||||||| |||| |||| | ||||||||||||||||||||||||    
T  458459 taacggagaggaccaaaagagataacagcagaagacataagggaccaaattaa 458511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 233 - 286
Target Start/End: Original strand, 72979 - 73032
Alignment:
Q  233 aaaaattaacggagaggaccaatagaggtaacggtagaagacataagggaccaa 286  Q
    ||||| |||||||||||||||| ||||||||||  |||||||||||| ||||||    
T  72979 aaaaactaacggagaggaccaaaagaggtaacgacagaagacataagagaccaa 73032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 254
Target Start/End: Original strand, 42278 - 42360
Alignment:
Q  172 tgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaa 254  Q
    ||||||||||||||||| ||||||  || |||||||||||||| ||||| | ||  |||| ||| | |||| |||||||||||    
T  42278 tgttgtatacaatggacctgcaatcaaacggttgaaatcatatcaaaaaatataaacattaaaatactaacagagaggaccaa 42360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 254
Target Start/End: Complemental strand, 22318 - 22229
Alignment:
Q  164 tggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaa 254  Q
    ||||||| ||||||||| |||| || || |||  |||||| |||||||||| | |||| |||| |||| ||||||||||||||| ||||||    
T  22318 tggttcactgttgtatataatgtacctggaatc-aatggtggaaatcatatcagaaatgttagacattaaaaaattaacggagatgaccaa 22229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 38717 - 38644
Alignment:
Q  182 aatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggaccaat 255  Q
    ||||||||||||||  || || | | |||||||||||||||||| ||||| ||||| |||||||| ||| ||||    
T  38717 aatggacatgcaatcaaacggctaatatcatataaaaaattttaatcattaaaaaactaacggaggggatcaat 38644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 253
Target Start/End: Original strand, 6501 - 6577
Alignment:
Q  178 atacaatggacatgcaattgaatggttgaaatcatataaaaaat-tttagtcatttaaaaattaacggagaggacca 253  Q
    |||||||||||||  |||  ||||||| |||||| ||||||||  ||||| |||| ||||| |||||||||||||||    
T  6501 atacaatggacatagaatcaaatggttaaaatcacataaaaaaaatttagacattaaaaaactaacggagaggacca 6577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 164 - 252
Target Start/End: Complemental strand, 8571 - 8483
Alignment:
Q  164 tggttcattgttgtatacaatggacatgcaattgaatggttgaaatcatataaaaaattttagtcatttaaaaattaacggagaggacc 252  Q
    ||||||| | ||||||| || |||| |||||| ||||||||||||| |||| | |||| |||  |||| ||||| ||||||||| ||||    
T  8571 tggttcactattgtatataacggacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgacc 8483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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