View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4815-Insertion-5 (Length: 924)

Name: NF4815-Insertion-5
Description: NF4815
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4815-Insertion-5
NF4815-Insertion-5
[»] chr1 (5 HSPs)
chr1 (317-923)||(13398232-13398842)
chr1 (8-281)||(13397854-13398131)
chr1 (505-674)||(42201500-42201670)
chr1 (505-674)||(42210368-42210538)
chr1 (634-749)||(28411678-28411792)
[»] chr6 (5 HSPs)
chr6 (505-747)||(6195584-6195826)
chr6 (505-578)||(12218004-12218077)
chr6 (517-623)||(8437073-8437179)
chr6 (505-578)||(8444596-8444669)
chr6 (505-578)||(8453400-8453473)
[»] chr3 (4 HSPs)
chr3 (508-751)||(36071408-36071651)
chr3 (506-584)||(43347757-43347835)
chr3 (517-673)||(37170239-37170397)
chr3 (568-654)||(43347703-43347791)
[»] chr5 (3 HSPs)
chr5 (505-665)||(4304530-4304691)
chr5 (508-590)||(28428450-28428532)
chr5 (631-682)||(28428536-28428586)
[»] chr4 (1 HSPs)
chr4 (505-584)||(17031714-17031793)
[»] chr8 (3 HSPs)
chr8 (511-598)||(42413407-42413494)
chr8 (549-614)||(30502171-30502237)
chr8 (546-602)||(42413489-42413545)
[»] chr2 (1 HSPs)
chr2 (529-589)||(29508298-29508357)
[»] chr7 (2 HSPs)
chr7 (553-607)||(9823875-9823929)
chr7 (553-607)||(10725800-10725854)


Alignment Details
Target: chr1 (Bit Score: 417; Significance: 0; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 417; E-Value: 0
Query Start/End: Original strand, 317 - 923
Target Start/End: Original strand, 13398232 - 13398842
Alignment:
Q  317 tagtaaatagggatgacaatgagtatccatgagtaagtacatataatatgatattggtctccgttccgttggataaatatgatactcttgcccgttccta 416  Q
    ||||||||||| ||||||||||||||| |||||||    |||||||||||||||| |||||||| ||||||||||||||||  |||||||||||||||||    
T  13398232 tagtaaataggaatgacaatgagtatc-atgagta----catataatatgatattcgtctccgtcccgttggataaatatggcactcttgcccgttccta 13398326  T
Q  417 tacctacgtgggtat---------gttaatccacgagtattgatgtatccactcgtatttcaggatatccttggatttttgaaaaatgannnnnnnn--a 505  Q
    |||||||||||||||         ||||||||||| |||||| |||||||||| |||||| ||||||||||||||||||||||||||||          |    
T  13398327 tacctacgtgggtatctcaatatggttaatccacgggtattggtgtatccacttgtatttaaggatatccttggatttttgaaaaatgatttttttttta 13398426  T
Q  506 aaaacttcaacttttaaacatccattttaatttcataagacatacataatccattcaaatttcataatccatacaaattccataacccatacaaatttca 605  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  13398427 aaaacttcaacttttaaatatccattttaatttcataagacatacataatctattcaaatttcataatccatgcaaattccataacccatacaaatttca 13398526  T
Q  606 tagttcttacataatatacaaatatttgaagtccatacaaattttcaacgaatcaacgtctaacaaaaagtttaaaatgacttgtgtatttcaagcttca 705  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||| ||||||| ||||||||||||||    
T  13398527 tagttcttacataatatacaaatatttgaagtccatacaaattttcaac----caacgtctaacaaaaagtttaaaaagacttgtatatttcaagcttca 13398622  T
Q  706 aaaatagtataagaagtcaaatctttatgtgtaaaatgtataaaaatgacat--gtgaatttaattaattagaaactagagttattttaaaagcttatat 803  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  13398623 aaaatagtataagaagtcaaatctt-atgtgtaaaatgtataaaaaagacatatgtgaatttaattaattagaaactagagttattttaaaagcttatat 13398721  T
Q  804 atataatttttctaatttattaacggatacggctatccgcgggcatgtgtactgtcaaatctatatccatgtccattaaataatgagtggttaaagttat 903  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13398722 atataatttttctaatttattaacggatacggctatccgcgggcatgtgtactgtcaaatctatatccatgtccaataaataatgagtggttaaagttat 13398821  T
Q  904 ta-atccatgttttatttttt 923  Q
    || ||||||||||| ||||||    
T  13398822 tatatccatgttttttttttt 13398842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 8 - 281
Target Start/End: Original strand, 13397854 - 13398131
Alignment:
Q  8 gtttctcttttgatggtttgaatcaaatcttta----caaaggcaaaatgaatcgaattattgtttacaaaaagacaatttaatttaaatcattttgata 103  Q
    |||||||||||||||  ||||||||||||||||    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13397854 gtttctcttttgatgaattgaatcaaatctttaattacaaaggcaaaatgaatctaattattgtttacaaaaagacaatttaatttaaatcattttgata 13397953  T
Q  104 tcattttctctgattcaaatcaaaatagagatgattcaaatctatcttctcctaggatcaatgattcaaattaaagttttaatgattcgaatcaatcttt 203  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13397954 tcattttctctgattcaaatcaaaatagggatgattcaaatctatcttctcctaggatcaatgattcaaattaaagttttaatgattcgaatcaatcttt 13398053  T
Q  204 atagtaacttacatttcagtttttgcactaatgattcaaatcatgatttaatgatttgaattaaacacatattttcaa 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13398054 atagtaacttacatttcagtttttgcactaatgattcaaatcatgatttaatgatttgaattaaacacatattttcaa 13398131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 505 - 674
Target Start/End: Complemental strand, 42201670 - 42201500
Alignment:
Q  505 aaaaacttcaacttttaaacatccattttaatttcataagacatacataatccattcaaatttcataatccatacaaattccataacccatacaaatttc 604  Q
    ||||||||||| |||||||||||||||||||||||| ||| |||||| |||||||||||||||  ||| ||||||||||| ||||    ||||||| |||    
T  42201670 aaaaacttcaatttttaaacatccattttaatttcacaagtcatacaaaatccattcaaattttgtaaaccatacaaatttcatagttgatacaaaattc 42201571  T
Q  605 atagttcttacataatata-caaatatttgaagtccatacaaattttcaacgaatcaacgtctaacaaaaa 674  Q
    ||||| |||||||||| ||   |||  ||||| ||||||||||||| |||| ||||||||||||| |||||    
T  42201570 atagtccttacataatctatgcaattcttgaaatccatacaaatttacaactaatcaacgtctaagaaaaa 42201500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 505 - 674
Target Start/End: Complemental strand, 42210538 - 42210368
Alignment:
Q  505 aaaaacttcaacttttaaacatccattttaatttcataagacatacataatccattcaaatttcataatccatacaaattccataacccatacaaatttc 604  Q
    ||||||||||| |||||||||||||||||||||||| ||| |||||| |||||||||||||||  ||| ||||||||||| ||||    ||||||| |||    
T  42210538 aaaaacttcaatttttaaacatccattttaatttcacaagtcatacaaaatccattcaaattttgtaaaccatacaaatttcatagttgatacaaaattc 42210439  T
Q  605 atagttcttacataatata-caaatatttgaagtccatacaaattttcaacgaatcaacgtctaacaaaaa 674  Q
    ||||| |||||||||| ||   |||  ||||| ||||||||||||| |||| ||||||||||||| |||||    
T  42210438 atagtccttacataatctatgcaattcttgaaatccatacaaatttacaactaatcaacgtctaagaaaaa 42210368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 634 - 749
Target Start/End: Original strand, 28411678 - 28411792
Alignment:
Q  634 aagtccatacaaattttcaacgaatcaacgtctaacaaaaagtttaaaatgacttgtgtatttcaagcttcaaaaatagtataagaagtcaaatctttat 733  Q
    ||||||||||||||||||||| ||||||||||||| ||||||| ||||| ||||| |||||| ||||||| |||||  |||||| ||| | ||||||| |    
T  28411678 aagtccatacaaattttcaactaatcaacgtctaaaaaaaagtataaaacgacttttgtattccaagcttaaaaaaaggtataaaaagcccaatcttt-t 28411776  T
Q  734 gtgtaaaatgtataaa 749  Q
     | |||||||||||||    
T  28411777 ttataaaatgtataaa 28411792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 1e-40; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 505 - 747
Target Start/End: Complemental strand, 6195826 - 6195584
Alignment:
Q  505 aaaaacttcaacttttaaacatccattttaatttcataagacatacataatccattcaaatttcataatccatacaaattccataacccatacaaatttc 604  Q
    |||||||| || |||||||||| | ||||||||||||||| | ||||||||||||||||||||  ||| ||||||||||| ||||| || |||||| |||    
T  6195826 aaaaactttaatttttaaacattctttttaatttcataagtcttacataatccattcaaattttgtaaaccatacaaatttcataatccgtacaaaattc 6195727  T
Q  605 atagttcttacataa--tatacaaatatttgaagtccatacaaattttcaacgaatcaacgtctaacaaaaagtttaaaatgacttgtgtatttcaagct 702  Q
    ||||| |||||||||  |||| ||||  || || |||| |||||||| |||| ||||||||||||| ||||||| | ||| ||||| ||||||| ||||     
T  6195726 atagtccttacataatctatataaattcttaaaatccaaacaaatttacaactaatcaacgtctaaaaaaaagtattaaaagacttatgtattttaagcg 6195627  T
Q  703 tcaaaaatagtataagaagtcaaatctttatgtgtaaaatgtata 747  Q
    | ||||| ||||||| |||||||||| |||||| |||||| ||||    
T  6195626 t-aaaaaaagtataaaaagtcaaatc-ttatgtataaaatatata 6195584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 505 - 578
Target Start/End: Original strand, 12218004 - 12218077
Alignment:
Q  505 aaaaacttcaacttttaaacatccattttaatttcataagacatacataatccattcaaatttcataatccata 578  Q
    |||||||| || || |||||||| |||||||||||||||| |||  |||||||||| ||||||||||| |||||    
T  12218004 aaaaactttaatttgtaaacatcaattttaatttcataagtcatgtataatccattaaaatttcataaaccata 12218077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 517 - 623
Target Start/End: Original strand, 8437073 - 8437179
Alignment:
Q  517 ttttaaacatccattttaatttcataagacatacataatccattcaaatttcataatccatacaaattccataacccatacaaatttcatagttcttaca 616  Q
    ||||||||||| |||||  ||||| ||| |||||||||  | |||||||||| ||| ||||||||||| ||||  | |||||||||||  ||| ||||||    
T  8437073 ttttaaacatctatttttctttcacaagtcatacataaatctttcaaatttcttaaaccatacaaattgcatattcaatacaaatttcggagtccttaca 8437172  T
Q  617 taatata 623  Q
    | |||||    
T  8437173 tgatata 8437179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 578
Target Start/End: Original strand, 8444596 - 8444669
Alignment:
Q  505 aaaaacttcaacttttaaacatccattttaatttcataagacatacataatccattcaaatttcataatccata 578  Q
    ||||||||||| ||| ||| ||  |||||||||||||||  ||||||||||  ||||||||||| ||| |||||    
T  8444596 aaaaacttcaattttaaaatatttattttaatttcataaatcatacataatttattcaaatttcttaaaccata 8444669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 578
Target Start/End: Original strand, 8453400 - 8453473
Alignment:
Q  505 aaaaacttcaacttttaaacatccattttaatttcataagacatacataatccattcaaatttcataatccata 578  Q
    ||||||||||| ||| ||| ||  |||||||||||||||  ||||||||||  ||||||||||| ||| |||||    
T  8453400 aaaaacttcaattttaaaatatttattttaatttcataaatcatacataatttattcaaatttcttaaaccata 8453473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 2e-36; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 508 - 751
Target Start/End: Complemental strand, 36071651 - 36071408
Alignment:
Q  508 aacttcaacttttaaacatccattttaatttcataagacatacataatccattcaaatttcataatccatacaaattccataacccatacaaatttcata 607  Q
    ||||| || |||||||||||||||||||||| |||||||||| |||||| ||| ||||||||||| ||||||||||| || || || | ||||||| ||     
T  36071651 aactttaatttttaaacatccattttaattttataagacatatataatcaatttaaatttcataaaccatacaaatttcacaatccctgcaaatttaatt 36071552  T
Q  608 gttcttacataa--tatacaaatatttgaagtccatacaaattttcaacgaatcaacgtctaacaaaaagtttaaaatgacttgtgtatttcaagcttca 705  Q
    || ||||||| |  |||||||||  ||||||| ||||||||||| || |  |||||||||||| ||||||| |||||  |||| |||||| ||||||| |    
T  36071551 gtccttacattatttatacaaattcttgaagttcatacaaatttacagcttatcaacgtctaa-aaaaagtataaaaaaacttatgtattccaagcttaa 36071453  T
Q  706 aaaatagtataagaagtcaaatctttatgtgtaaaatgtataaaaa 751  Q
    |||| | ||||| ||| |||| | |||||| |||||||||||||||    
T  36071452 aaaaaattataaaaaggcaaa-ccttatgtataaaatgtataaaaa 36071408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 506 - 584
Target Start/End: Complemental strand, 43347835 - 43347757
Alignment:
Q  506 aaaacttcaacttttaaacatccattttaatttcataagacatacataatccattcaaatttcataatccatacaaatt 584  Q
    |||||||||| ||||||||||||||   ||||||||||  ||||||||||||||||||||| || ||| ||||||||||    
T  43347835 aaaacttcaatttttaaacatccatgcaaatttcataattcatacataatccattcaaattccacaattcatacaaatt 43347757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 517 - 673
Target Start/End: Complemental strand, 37170397 - 37170239
Alignment:
Q  517 ttttaaacatccattttaatttcataagacatacataatccattcaaatttcataatccatacaaattccataacccatacaaatttcatagttcttaca 616  Q
    ||||||| ||| ||| |||||||||||   || ||||||| ||||||| ||||||| |||  ||||||| || | ||||||||| ||  | || ||||||    
T  37170397 ttttaaatatctattataatttcataactgatgcataatcgattcaaaattcataaaccaatcaaattctatgatccatacaaactttgtggtccttaca 37170298  T
Q  617 taa--tatacaaatatttgaagtccatacaaattttcaacgaatcaacgtctaacaaaa 673  Q
    |||  |||||||||  || |||| ||| |||||||||||| |||| |||||||| ||||    
T  37170297 taatctatacaaattcttcaagttcatgcaaattttcaactaatcgacgtctaaaaaaa 37170239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 568 - 654
Target Start/End: Complemental strand, 43347791 - 43347703
Alignment:
Q  568 cataatccatacaaattccataacccatacaaatttcatagttcttacataat--atacaaatatttgaagtccatacaaattttcaac 654  Q
    |||||||||| ||||||||| ||  ||||||||||| ||| | |||||||  |  ||||||||  |||||||||||| |||||||||||    
T  43347791 cataatccattcaaattccacaattcatacaaattttataatccttacatggtccatacaaattcttgaagtccatataaattttcaac 43347703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 2e-20; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 505 - 665
Target Start/End: Original strand, 4304530 - 4304691
Alignment:
Q  505 aaaaacttcaacttttaaacatccattttaatttcataagacatacataatccattcaaatttcataatccatacaaattccataacccatacaaatttc 604  Q
    ||||||||| |||||||||||||| |   ||||||||||   ||||||||| |||||||||||||||| ||||||||||| ||||| |  |||||||||     
T  4304530 aaaaacttcgacttttaaacatccttgcaaatttcataatctatacataattcattcaaatttcataaaccatacaaatt-cataatcattacaaattta 4304628  T
Q  605 atagttcttacataa--tatacaaatatttgaagtccatacaaattttcaacgaatcaacgtc 665  Q
    ||| | |||||||||  |||||||||  |||||||| ||||| ||||||| | ||||| ||||    
T  4304629 ataatccttacataatgtatacaaattcttgaagtctatacacattttcacctaatcaccgtc 4304691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 508 - 590
Target Start/End: Original strand, 28428450 - 28428532
Alignment:
Q  508 aacttcaacttttaaacatccattttaatttcataagacatacataatccattcaaatttcataatccatacaaattccataa 590  Q
    |||||||| ||||||||||  |||||||||||||||| ||||||||||||||| ||||||| ||| ||||||||||| |||||    
T  28428450 aacttcaatttttaaacatgtattttaatttcataagccatacataatccatttaaatttcgtaacccatacaaattgcataa 28428532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 631 - 682
Target Start/End: Original strand, 28428536 - 28428586
Alignment:
Q  631 ttgaagtccatacaaattttcaacgaatcaacgtctaacaaaaagtttaaaa 682  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||| |||||    
T  28428536 ttgaagtccatacaaattttcaactaatcaacgtct-acaaaaagtataaaa 28428586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 6e-18; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 505 - 584
Target Start/End: Original strand, 17031714 - 17031793
Alignment:
Q  505 aaaaacttcaacttttaaacatccattttaatttcataagacatacataatccattcaaatttcataatccatacaaatt 584  Q
    |||| |||||| ||| ||||||| ||||| || ||||||| |||||||||||||||||||||||||||| ||||||||||    
T  17031714 aaaatcttcaattttgaaacatctattttgatatcataagccatacataatccattcaaatttcataattcatacaaatt 17031793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 511 - 598
Target Start/End: Original strand, 42413407 - 42413494
Alignment:
Q  511 ttcaacttttaaacatccattttaatttcataagacatacataatccattcaaatttcataatccatacaaattccataacccataca 598  Q
    ||||||||||||||||||||   ||||||||||  ||||||||||| |||||||||||||||  | |||||||||| ||| |||||||    
T  42413407 ttcaacttttaaacatccatacaaatttcataatccatacataatctattcaaatttcataactcttacaaattccttaatccataca 42413494  T

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Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 549 - 614
Target Start/End: Original strand, 30502171 - 30502237
Alignment:
Q  549 acataatccattcaaatttcataat-ccatacaaattccataacccatacaaatttcatagttctta 614  Q
    |||||||| ||||||||| |||||  ||||||||||| ||||| |||||||||||||||| ||||||    
T  30502171 acataatctattcaaattccataaaaccatacaaatttcataatccatacaaatttcataattctta 30502237  T

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Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 546 - 602
Target Start/End: Original strand, 42413489 - 42413545
Alignment:
Q  546 catacataatccattcaaatttcataatccatacaaattccataacccatacaaatt 602  Q
    ||||||||||| |||||||||||||||  | |||||||||| ||| |||||||||||    
T  42413489 catacataatctattcaaatttcataactcttacaaattccttaatccatacaaatt 42413545  T

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Target: chr2 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 529 - 589
Target Start/End: Complemental strand, 29508357 - 29508298
Alignment:
Q  529 attttaatttcataagacatacataatccattcaaatttcataatccatacaaattccata 589  Q
    |||||||||| ||||| | ||||||||||||| ||||||||||| ||||||||||| ||||    
T  29508357 attttaattttataagtcttacataatccatt-aaatttcataaaccatacaaatttcata 29508298  T

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Target: chr7 (Bit Score: 31; Significance: 0.00000008; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 553 - 607
Target Start/End: Complemental strand, 9823929 - 9823875
Alignment:
Q  553 aatccattcaaatttcataatccatacaaattccataacccatacaaatttcata 607  Q
    |||||||| |||||| |||| || ||||||||||||||  |||||||||||||||    
T  9823929 aatccattaaaattttataagccctacaaattccataattcatacaaatttcata 9823875  T

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Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 553 - 607
Target Start/End: Complemental strand, 10725854 - 10725800
Alignment:
Q  553 aatccattcaaatttcataatccatacaaattccataacccatacaaatttcata 607  Q
    |||||||| |||||| |||| || ||||||||||||||  |||||||||||||||    
T  10725854 aatccattaaaattttataagccctacaaattccataattcatacaaatttcata 10725800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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