View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4818-Insertion-1 (Length: 1100)

Name: NF4818-Insertion-1
Description: NF4818
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4818-Insertion-1
NF4818-Insertion-1
[»] chr8 (58 HSPs)
chr8 (443-1067)||(13461385-13462016)
chr8 (346-678)||(31248706-31249037)
chr8 (31-265)||(13461133-13461367)
chr8 (729-985)||(31249157-31249423)
chr8 (726-905)||(38294775-38294951)
chr8 (42-143)||(7130615-7130716)
chr8 (290-344)||(603964-604018)
chr8 (289-344)||(1852457-1852512)
chr8 (290-344)||(1199782-1199836)
chr8 (290-344)||(3990734-3990788)
chr8 (290-344)||(31247914-31247968)
chr8 (290-344)||(32063151-32063205)
chr8 (11-121)||(39870840-39870950)
chr8 (42-142)||(7130086-7130186)
chr8 (51-151)||(42432034-42432134)
chr8 (289-344)||(1851312-1851367)
chr8 (291-340)||(37197394-37197443)
chr8 (710-782)||(27853193-27853265)
chr8 (882-987)||(38294967-38295075)
chr8 (290-344)||(3458850-3458904)
chr8 (223-265)||(30206525-30206567)
chr8 (290-344)||(44015069-44015123)
chr8 (726-783)||(13797746-13797803)
chr8 (726-783)||(30206290-30206347)
chr8 (825-905)||(39616877-39616956)
chr8 (8-140)||(39872184-39872314)
chr8 (223-265)||(603907-603949)
chr8 (223-265)||(9389502-9389544)
chr8 (290-344)||(30436942-30436996)
chr8 (726-783)||(3990601-3990658)
chr8 (42-123)||(23769054-23769134)
chr8 (42-120)||(42431626-42431706)
chr8 (50-123)||(45156388-45156461)
chr8 (223-263)||(23959945-23959985)
chr8 (223-263)||(38111714-38111754)
chr8 (698-749)||(38294721-38294772)
chr8 (290-329)||(44429823-44429862)
chr8 (290-329)||(44433558-44433597)
chr8 (223-265)||(3458794-3458836)
chr8 (223-265)||(14683411-14683453)
chr8 (223-265)||(35618021-35618063)
chr8 (290-344)||(42045997-42046051)
chr8 (223-265)||(44434609-44434651)
chr8 (52-142)||(45155981-45156071)
chr8 (726-783)||(30437633-30437690)
chr8 (40-140)||(1797694-1797793)
chr8 (221-265)||(30436884-30436928)
chr8 (223-262)||(23086384-23086423)
chr8 (223-262)||(42046068-42046107)
chr8 (703-749)||(31249105-31249151)
chr8 (223-265)||(37197337-37197379)
chr8 (223-261)||(39921885-39921923)
chr8 (734-783)||(14683209-14683258)
chr8 (226-263)||(32063221-32063258)
chr8 (599-668)||(34588524-34588593)
chr8 (223-264)||(34948245-34948286)
chr8 (916-987)||(39617010-39617083)
chr8 (726-783)||(44014885-44014942)
[»] chr5 (65 HSPs)
chr5 (351-749)||(7779761-7780161)
chr5 (8-139)||(14410769-14410900)
chr5 (49-151)||(25868495-25868597)
chr5 (42-151)||(25868062-25868171)
chr5 (882-987)||(7779446-7779554)
chr5 (730-905)||(7779570-7779754)
chr5 (290-344)||(23141302-23141356)
chr5 (11-80)||(40018064-40018133)
chr5 (696-986)||(3432997-3433302)
chr5 (726-928)||(14854347-14854560)
chr5 (290-344)||(7672843-7672897)
chr5 (290-344)||(14164306-14164360)
chr5 (290-344)||(16529288-16529342)
chr5 (290-344)||(19123436-19123490)
chr5 (290-344)||(41092367-41092421)
chr5 (50-143)||(14410201-14410293)
chr5 (290-343)||(43394665-43394718)
chr5 (290-342)||(10409861-10409913)
chr5 (290-342)||(16538129-16538181)
chr5 (129-180)||(14410738-14410789)
chr5 (290-343)||(35160038-35160091)
chr5 (726-783)||(41511457-41511513)
chr5 (726-778)||(23141052-23141104)
chr5 (294-342)||(38004136-38004184)
chr5 (726-785)||(5398190-5398249)
chr5 (720-783)||(19322567-19322630)
chr5 (96-150)||(7732839-7732893)
chr5 (223-265)||(9487374-9487416)
chr5 (57-142)||(17854724-17854810)
chr5 (223-265)||(19123502-19123544)
chr5 (290-344)||(26522808-26522862)
chr5 (223-265)||(38110587-38110629)
chr5 (223-265)||(41511684-41511726)
chr5 (726-783)||(7128007-7128064)
chr5 (40-123)||(6408594-6408677)
chr5 (290-330)||(7129149-7129189)
chr5 (95-143)||(25994553-25994601)
chr5 (95-143)||(32804887-32804935)
chr5 (129-176)||(17854696-17854743)
chr5 (599-685)||(38110488-38110575)
chr5 (726-780)||(9487587-9487641)
chr5 (726-780)||(13104839-13104893)
chr5 (223-265)||(14164248-14164290)
chr5 (729-783)||(16305877-16305931)
chr5 (223-265)||(16306106-16306148)
chr5 (129-175)||(20419543-20419589)
chr5 (14-80)||(26092490-26092556)
chr5 (223-265)||(41092311-41092353)
chr5 (223-265)||(43394609-43394651)
chr5 (696-749)||(5398252-5398305)
chr5 (129-170)||(25994587-25994628)
chr5 (696-749)||(31486587-31486640)
chr5 (730-783)||(41092501-41092554)
chr5 (60-107)||(16060779-16060826)
chr5 (223-262)||(20563309-20563348)
chr5 (95-142)||(25994943-25994990)
chr5 (223-262)||(26522752-26522791)
chr5 (599-674)||(41511597-41511672)
chr5 (223-261)||(7129209-7129247)
chr5 (223-265)||(10409927-10409969)
chr5 (223-265)||(19322770-19322812)
chr5 (696-749)||(14854563-14854616)
chr5 (696-749)||(14854657-14854710)
chr5 (726-783)||(19122705-19122761)
chr5 (129-170)||(26092614-26092655)
[»] chr2 (85 HSPs)
chr2 (379-950)||(41075264-41075845)
chr2 (346-685)||(17929853-17930192)
chr2 (720-950)||(41075885-41076127)
chr2 (720-950)||(41076167-41076410)
chr2 (11-142)||(33710817-33710948)
chr2 (726-903)||(11131368-11131554)
chr2 (726-905)||(15256359-15256542)
chr2 (732-905)||(17930274-17930459)
chr2 (595-749)||(27351679-27351834)
chr2 (882-987)||(15255775-15255882)
chr2 (570-685)||(20641145-20641260)
chr2 (49-150)||(19004770-19004870)
chr2 (887-986)||(11131243-11131345)
chr2 (290-344)||(12896141-12896195)
chr2 (52-150)||(42807432-42807529)
chr2 (289-344)||(11131672-11131727)
chr2 (290-344)||(627918-627972)
chr2 (290-344)||(6348408-6348462)
chr2 (884-987)||(17930477-17930583)
chr2 (290-344)||(27351609-27351663)
chr2 (42-123)||(42882506-42882585)
chr2 (290-344)||(44256984-44257038)
chr2 (291-344)||(30556940-30556993)
chr2 (884-950)||(15256560-15256627)
chr2 (290-344)||(19640454-19640508)
chr2 (290-344)||(19839047-19839101)
chr2 (290-344)||(20639906-20639960)
chr2 (731-793)||(24129580-24129642)
chr2 (745-799)||(27351856-27351910)
chr2 (830-900)||(27351955-27352024)
chr2 (290-344)||(44543461-44543515)
chr2 (726-783)||(11658009-11658066)
chr2 (730-799)||(15253508-15253577)
chr2 (696-749)||(15256303-15256356)
chr2 (805-893)||(15783019-15783108)
chr2 (223-262)||(28611567-28611606)
chr2 (41-123)||(42808607-42808689)
chr2 (223-265)||(833325-833367)
chr2 (223-265)||(8430608-8430650)
chr2 (223-265)||(11658242-11658284)
chr2 (290-344)||(12898570-12898624)
chr2 (223-265)||(27351552-27351594)
chr2 (223-265)||(37130804-37130846)
chr2 (828-902)||(38857712-38857785)
chr2 (42-143)||(6402357-6402457)
chr2 (726-783)||(14336084-14336141)
chr2 (726-783)||(20641338-20641395)
chr2 (909-950)||(38857826-38857867)
chr2 (726-783)||(41326930-41326987)
chr2 (8-80)||(187282-187354)
chr2 (223-262)||(2132017-2132056)
chr2 (710-749)||(15256218-15256257)
chr2 (223-262)||(20709601-20709640)
chr2 (223-265)||(12896085-12896127)
chr2 (290-344)||(29550665-29550719)
chr2 (223-265)||(30556882-30556924)
chr2 (223-265)||(41327159-41327201)
chr2 (223-265)||(44543405-44543447)
chr2 (57-150)||(303378-303471)
chr2 (42-117)||(304372-304446)
chr2 (696-749)||(17930212-17930265)
chr2 (50-139)||(19004907-19004995)
chr2 (143-180)||(33710925-33710962)
chr2 (885-987)||(41076417-41076522)
chr2 (726-783)||(41995281-41995338)
chr2 (726-783)||(44256883-44256940)
chr2 (1-65)||(14413434-14413498)
chr2 (696-748)||(15253448-15253500)
chr2 (838-905)||(15253659-15253726)
chr2 (223-263)||(20639824-20639864)
chr2 (731-783)||(20709366-20709418)
chr2 (129-180)||(3816282-3816333)
chr2 (223-262)||(11736854-11736893)
chr2 (223-262)||(14335872-14335911)
chr2 (223-262)||(17370674-17370713)
chr2 (599-674)||(20709512-20709587)
chr2 (96-170)||(30398357-30398429)
chr2 (60-141)||(3816311-3816390)
chr2 (223-265)||(10128827-10128869)
chr2 (223-265)||(11131742-11131784)
chr2 (696-754)||(20709421-20709478)
chr2 (132-170)||(24582477-24582515)
chr2 (129-167)||(24582539-24582577)
chr2 (726-783)||(12898437-12898494)
chr2 (696-749)||(41326990-41327042)
[»] chr1 (90 HSPs)
chr1 (351-685)||(11928578-11928911)
chr1 (346-649)||(23481973-23482275)
chr1 (696-903)||(41460979-41461194)
chr1 (8-123)||(42294519-42294634)
chr1 (738-905)||(23482453-23482629)
chr1 (730-905)||(46533041-46533216)
chr1 (738-903)||(41462642-41462821)
chr1 (811-905)||(11928322-11928414)
chr1 (290-344)||(44099323-44099377)
chr1 (570-678)||(38684705-38684813)
chr1 (290-344)||(28949606-28949660)
chr1 (290-344)||(51114242-51114296)
chr1 (50-142)||(11434710-11434801)
chr1 (730-793)||(11928470-11928533)
chr1 (289-344)||(23480758-23480813)
chr1 (290-344)||(27296657-27296711)
chr1 (290-344)||(38685681-38685735)
chr1 (289-333)||(21882721-21882765)
chr1 (54-121)||(11435266-11435333)
chr1 (290-344)||(318944-318998)
chr1 (290-340)||(5429593-5429643)
chr1 (223-265)||(21618691-21618733)
chr1 (223-265)||(21618811-21618853)
chr1 (89-143)||(37920146-37920200)
chr1 (290-340)||(42491693-42491743)
chr1 (586-639)||(23482274-23482327)
chr1 (300-344)||(24595548-24595592)
chr1 (11-123)||(32713651-32713762)
chr1 (909-987)||(49483938-49484018)
chr1 (825-905)||(49484062-49484141)
chr1 (129-180)||(32713234-32713285)
chr1 (698-749)||(41462836-41462887)
chr1 (290-344)||(1155774-1155828)
chr1 (223-261)||(21882783-21882821)
chr1 (223-265)||(25931377-25931419)
chr1 (881-950)||(41462555-41462625)
chr1 (725-783)||(42491824-42491882)
chr1 (290-344)||(48411682-48411736)
chr1 (726-783)||(12115844-12115901)
chr1 (882-950)||(41460892-41460961)
chr1 (726-783)||(45417110-45417167)
chr1 (696-749)||(46533223-46533276)
chr1 (696-749)||(46533327-46533380)
chr1 (726-779)||(52407732-52407785)
chr1 (726-778)||(18912900-18912952)
chr1 (731-783)||(21618462-21618514)
chr1 (52-120)||(37919674-37919742)
chr1 (221-265)||(44264525-44264569)
chr1 (726-781)||(1648041-1648096)
chr1 (599-674)||(4099989-4100064)
chr1 (223-262)||(39282406-39282445)
chr1 (223-265)||(4099935-4099977)
chr1 (223-265)||(6537150-6537192)
chr1 (223-265)||(12116076-12116118)
chr1 (223-265)||(16165233-16165275)
chr1 (599-685)||(16165287-16165373)
chr1 (223-265)||(23480702-23480744)
chr1 (223-265)||(27296725-27296767)
chr1 (223-265)||(28949550-28949592)
chr1 (129-167)||(32306413-32306451)
chr1 (223-265)||(44099268-44099310)
chr1 (96-150)||(52690190-52690244)
chr1 (726-783)||(16165451-16165508)
chr1 (129-170)||(19062895-19062936)
chr1 (61-142)||(32713176-32713257)
chr1 (726-783)||(44264294-44264351)
chr1 (129-169)||(21258322-21258362)
chr1 (233-265)||(38685750-38685782)
chr1 (11-67)||(45886884-45886940)
chr1 (599-647)||(52407577-52407625)
chr1 (881-943)||(23482640-23482703)
chr1 (732-783)||(39282212-39282263)
chr1 (223-262)||(42491637-42491676)
chr1 (223-262)||(44451709-44451748)
chr1 (599-674)||(45416951-45417026)
chr1 (8-79)||(46190295-46190365)
chr1 (223-262)||(47791420-47791459)
chr1 (730-781)||(51271998-51272049)
chr1 (223-261)||(1155718-1155756)
chr1 (227-261)||(1648271-1648305)
chr1 (223-265)||(3226525-3226566)
chr1 (132-170)||(7013260-7013298)
chr1 (223-265)||(18913119-18913161)
chr1 (96-150)||(43625561-43625614)
chr1 (223-257)||(52741033-52741067)
chr1 (710-783)||(4100107-4100180)
chr1 (11-72)||(6086711-6086772)
chr1 (726-775)||(27891980-27892029)
chr1 (52-121)||(44527928-44527996)
chr1 (223-264)||(48411626-48411667)
[»] chr6 (53 HSPs)
chr6 (346-749)||(2969753-2970160)
chr6 (805-987)||(12295933-12296116)
chr6 (703-903)||(24223299-24223502)
chr6 (698-905)||(6601699-6601914)
chr6 (727-903)||(24222962-24223147)
chr6 (726-905)||(16799296-16799485)
chr6 (570-675)||(29202093-29202198)
chr6 (825-905)||(17079905-17079984)
chr6 (805-905)||(17201486-17201584)
chr6 (886-987)||(24223524-24223628)
chr6 (886-987)||(17200326-17200430)
chr6 (909-982)||(17203662-17203737)
chr6 (290-344)||(1394294-1394348)
chr6 (290-344)||(25068527-25068581)
chr6 (726-902)||(33482167-33482355)
chr6 (42-142)||(31778784-31778883)
chr6 (129-180)||(32879723-32879774)
chr6 (290-344)||(4810781-4810835)
chr6 (726-792)||(17073113-17073179)
chr6 (886-943)||(17200459-17200517)
chr6 (290-344)||(29202729-29202783)
chr6 (883-943)||(17200546-17200607)
chr6 (726-783)||(17203346-17203403)
chr6 (882-987)||(16799508-16799615)
chr6 (36-123)||(30746520-30746606)
chr6 (223-265)||(1394363-1394405)
chr6 (223-265)||(17203575-17203617)
chr6 (290-344)||(17905577-17905631)
chr6 (896-987)||(24223167-24223261)
chr6 (726-783)||(17906324-17906381)
chr6 (52-151)||(5741239-5741339)
chr6 (290-344)||(9829257-9829309)
chr6 (223-262)||(17905521-17905560)
chr6 (57-143)||(1860348-1860433)
chr6 (223-265)||(4099598-4099640)
chr6 (11-80)||(9929549-9929618)
chr6 (730-783)||(23622769-23622822)
chr6 (726-783)||(29201949-29202006)
chr6 (696-749)||(33482085-33482138)
chr6 (129-169)||(26622235-26622275)
chr6 (129-169)||(26728213-26728253)
chr6 (95-142)||(32879699-32879746)
chr6 (720-783)||(34294402-34294465)
chr6 (223-261)||(4810724-4810762)
chr6 (223-265)||(9829323-9829365)
chr6 (651-685)||(24223273-24223307)
chr6 (223-265)||(29202797-29202839)
chr6 (223-257)||(32207951-32207985)
chr6 (223-265)||(34294604-34294646)
chr6 (726-783)||(809475-809532)
chr6 (726-783)||(4099815-4099872)
chr6 (726-783)||(26832041-26832098)
chr6 (726-783)||(32208157-32208214)
[»] chr3 (71 HSPs)
chr3 (346-749)||(17756047-17756452)
chr3 (346-749)||(19057367-19057772)
chr3 (536-749)||(25916919-25917132)
chr3 (536-749)||(25938030-25938247)
chr3 (696-905)||(25716672-25716885)
chr3 (346-461)||(25938278-25938392)
chr3 (696-905)||(9240564-9240787)
chr3 (726-905)||(17755855-17756044)
chr3 (726-905)||(19057175-19057364)
chr3 (726-905)||(25917232-25917420)
chr3 (289-344)||(17757936-17757991)
chr3 (289-344)||(19059256-19059311)
chr3 (290-344)||(2702398-2702452)
chr3 (290-344)||(53047012-53047066)
chr3 (886-987)||(9240807-9240911)
chr3 (882-987)||(25917436-25917544)
chr3 (11-123)||(52562628-52562740)
chr3 (42-121)||(4040880-4040958)
chr3 (887-987)||(17755738-17755841)
chr3 (887-987)||(19057058-19057161)
chr3 (726-793)||(25937960-25938027)
chr3 (290-344)||(836916-836970)
chr3 (290-344)||(11454090-11454144)
chr3 (290-344)||(46452515-46452569)
chr3 (290-344)||(47501257-47501311)
chr3 (11-123)||(45003300-45003413)
chr3 (882-987)||(25937731-25937839)
chr3 (55-142)||(16280945-16281031)
chr3 (289-344)||(24365886-24365941)
chr3 (574-685)||(47502456-47502567)
chr3 (42-123)||(4041052-4041134)
chr3 (290-344)||(36642839-36642893)
chr3 (290-344)||(43017605-43017659)
chr3 (291-344)||(11454715-11454768)
chr3 (42-143)||(36754119-36754220)
chr3 (883-987)||(9240950-9241057)
chr3 (293-344)||(23777182-23777233)
chr3 (883-987)||(25716902-25717009)
chr3 (223-265)||(836861-836903)
chr3 (223-265)||(860685-860727)
chr3 (223-265)||(20876534-20876576)
chr3 (223-265)||(38886879-38886921)
chr3 (223-265)||(47501200-47501242)
chr3 (223-265)||(53046956-53046998)
chr3 (730-799)||(2469259-2469328)
chr3 (696-749)||(9856272-9856325)
chr3 (292-344)||(25916795-25916847)
chr3 (300-344)||(37760816-37760860)
chr3 (8-104)||(52562754-52562850)
chr3 (223-262)||(51654740-51654779)
chr3 (223-265)||(17758007-17758049)
chr3 (223-265)||(19059327-19059369)
chr3 (223-265)||(37760884-37760926)
chr3 (290-344)||(45514324-45514378)
chr3 (129-167)||(51171088-51171126)
chr3 (726-783)||(20876751-20876808)
chr3 (726-783)||(35560458-35560514)
chr3 (726-783)||(38887094-38887151)
chr3 (730-783)||(51654508-51654561)
chr3 (805-905)||(9856400-9856493)
chr3 (223-263)||(10267379-10267419)
chr3 (11-103)||(16279281-16279372)
chr3 (129-180)||(16280917-16280968)
chr3 (227-265)||(2702467-2702505)
chr3 (604-674)||(11523227-11523297)
chr3 (129-167)||(22754766-22754804)
chr3 (290-344)||(35560589-35560643)
chr3 (726-783)||(10267142-10267199)
chr3 (223-260)||(11523319-11523356)
chr3 (11-80)||(20513468-20513537)
chr3 (696-749)||(52301073-52301126)
[»] chr4 (93 HSPs)
chr4 (569-793)||(9711452-9711673)
chr4 (805-950)||(19553342-19553486)
chr4 (805-987)||(33117307-33117489)
chr4 (42-142)||(40361677-40361776)
chr4 (570-684)||(18001617-18001731)
chr4 (864-987)||(46883339-46883466)
chr4 (696-799)||(11874760-11874864)
chr4 (42-150)||(16936084-16936191)
chr4 (875-950)||(29013802-29013878)
chr4 (570-685)||(12900055-12900170)
chr4 (290-344)||(48076697-48076751)
chr4 (290-344)||(8478613-8478667)
chr4 (290-344)||(12795592-12795646)
chr4 (57-139)||(19487488-19487570)
chr4 (290-344)||(36639684-36639738)
chr4 (825-897)||(11874920-11874991)
chr4 (582-678)||(24050282-24050378)
chr4 (20-123)||(4674966-4675069)
chr4 (293-344)||(47769290-47769341)
chr4 (725-783)||(7822070-7822128)
chr4 (290-344)||(18000378-18000432)
chr4 (290-344)||(24050872-24050926)
chr4 (290-344)||(32010581-32010635)
chr4 (290-344)||(47427876-47427930)
chr4 (223-265)||(52688632-52688674)
chr4 (223-265)||(52688752-52688794)
chr4 (726-799)||(24389736-24389809)
chr4 (726-783)||(53144347-53144404)
chr4 (57-142)||(53260213-53260298)
chr4 (726-789)||(2527208-2527271)
chr4 (41-139)||(36153408-36153504)
chr4 (52-142)||(36153969-36154057)
chr4 (223-265)||(8478557-8478599)
chr4 (290-344)||(21580931-21580985)
chr4 (725-783)||(22293443-22293501)
chr4 (223-265)||(22293672-22293714)
chr4 (725-783)||(24050148-24050206)
chr4 (291-341)||(29968502-29968552)
chr4 (223-265)||(53143058-53143100)
chr4 (223-265)||(54652925-54652967)
chr4 (726-783)||(2177592-2177649)
chr4 (888-986)||(7526446-7526547)
chr4 (726-783)||(7797819-7797876)
chr4 (303-344)||(23952232-23952273)
chr4 (726-783)||(28379557-28379614)
chr4 (726-783)||(28813679-28813736)
chr4 (696-749)||(29013640-29013693)
chr4 (726-783)||(54653171-54653228)
chr4 (879-950)||(9711299-9711371)
chr4 (52-124)||(26251445-26251516)
chr4 (293-344)||(41850970-41851021)
chr4 (227-265)||(2177821-2177859)
chr4 (290-344)||(2479132-2479186)
chr4 (223-265)||(8119285-8119327)
chr4 (223-265)||(24050940-24050982)
chr4 (223-261)||(28379338-28379376)
chr4 (223-265)||(28813906-28813948)
chr4 (223-265)||(29968567-29968609)
chr4 (223-265)||(36639756-36639798)
chr4 (223-265)||(41850910-41850952)
chr4 (223-265)||(47427819-47427861)
chr4 (52-106)||(51721486-51721540)
chr4 (726-783)||(8119064-8119121)
chr4 (223-260)||(8396928-8396965)
chr4 (726-783)||(8478743-8478800)
chr4 (726-783)||(18001810-18001867)
chr4 (601-674)||(28379394-28379467)
chr4 (129-170)||(32304748-32304789)
chr4 (42-103)||(51721090-51721151)
chr4 (223-263)||(18000296-18000336)
chr4 (8-80)||(32303818-32303890)
chr4 (41-124)||(34981932-34982014)
chr4 (129-180)||(53260185-53260236)
chr4 (599-674)||(54652979-54653054)
chr4 (223-265)||(2479075-2479117)
chr4 (129-175)||(5314390-5314436)
chr4 (223-261)||(12795536-12795574)
chr4 (133-175)||(23811342-23811384)
chr4 (223-261)||(23952167-23952205)
chr4 (292-322)||(37325253-37325283)
chr4 (88-142)||(40277091-40277145)
chr4 (223-265)||(44500935-44500977)
chr4 (129-167)||(46844627-46844665)
chr4 (223-261)||(47769362-47769400)
chr4 (40-114)||(53259769-53259843)
chr4 (726-783)||(4942157-4942214)
chr4 (223-256)||(4942393-4942426)
chr4 (236-265)||(10467020-10467049)
chr4 (726-783)||(12899930-12899987)
chr4 (11-76)||(16935489-16935554)
chr4 (11-80)||(21283754-21283822)
chr4 (301-334)||(32962687-32962720)
chr4 (223-264)||(48076766-48076807)
[»] scaffold0090 (4 HSPs)
scaffold0090 (696-905)||(12243-12459)
scaffold0090 (289-344)||(12071-12126)
scaffold0090 (595-685)||(12142-12224)
scaffold0090 (882-987)||(12475-12583)
[»] chr7 (104 HSPs)
chr7 (728-905)||(16376276-16376463)
chr7 (593-749)||(16376015-16376175)
chr7 (11-140)||(30859772-30859901)
chr7 (886-987)||(4455369-4455473)
chr7 (570-685)||(16672177-16672292)
chr7 (570-685)||(17646545-17646660)
chr7 (570-685)||(28170522-28170637)
chr7 (576-670)||(41279330-41279424)
chr7 (726-799)||(41279075-41279148)
chr7 (570-678)||(11645394-11645502)
chr7 (806-905)||(4455493-4455588)
chr7 (289-344)||(5553672-5553727)
chr7 (290-344)||(2354141-2354195)
chr7 (291-344)||(16375538-16375591)
chr7 (886-984)||(16377426-16377527)
chr7 (805-905)||(34988809-34988907)
chr7 (898-987)||(38694821-38694913)
chr7 (828-903)||(16377527-16377601)
chr7 (696-783)||(21224864-21224950)
chr7 (290-344)||(2852928-2852982)
chr7 (290-344)||(4680613-4680667)
chr7 (290-344)||(4681338-4681392)
chr7 (294-344)||(9396298-9396348)
chr7 (290-344)||(16362274-16362328)
chr7 (886-947)||(16376483-16376545)
chr7 (290-344)||(16673841-16673895)
chr7 (290-344)||(17648209-17648263)
chr7 (290-344)||(22773619-22773673)
chr7 (290-344)||(45418398-45418452)
chr7 (726-783)||(16491867-16491924)
chr7 (696-749)||(41279151-41279204)
chr7 (805-905)||(5553753-5553851)
chr7 (289-333)||(22967863-22967907)
chr7 (290-344)||(11650121-11650175)
chr7 (290-344)||(12140569-12140623)
chr7 (223-265)||(16673910-16673952)
chr7 (223-265)||(17648278-17648320)
chr7 (290-344)||(30991612-30991666)
chr7 (290-344)||(35125445-35125499)
chr7 (290-344)||(48639116-48639170)
chr7 (291-344)||(6250385-6250438)
chr7 (726-783)||(22324793-22324850)
chr7 (882-987)||(16377619-16377727)
chr7 (805-905)||(24788667-24788765)
chr7 (42-170)||(36653700-36653827)
chr7 (570-685)||(19222775-19222889)
chr7 (294-344)||(9141094-9141144)
chr7 (223-265)||(21128802-21128844)
chr7 (223-265)||(22325023-22325065)
chr7 (223-261)||(22967807-22967845)
chr7 (223-265)||(32277694-32277736)
chr7 (223-265)||(45418342-45418384)
chr7 (882-950)||(5553867-5553936)
chr7 (696-749)||(16376218-16376271)
chr7 (710-783)||(18487714-18487787)
chr7 (726-783)||(19222643-19222700)
chr7 (696-749)||(26454506-26454559)
chr7 (88-151)||(16488169-16488232)
chr7 (728-783)||(40686416-40686471)
chr7 (223-265)||(2354085-2354127)
chr7 (726-783)||(2354271-2354329)
chr7 (888-987)||(4454926-4455028)
chr7 (223-265)||(4681283-4681325)
chr7 (223-265)||(6250454-6250496)
chr7 (223-265)||(12140513-12140555)
chr7 (223-265)||(22773563-22773605)
chr7 (223-265)||(34838261-34838303)
chr7 (223-265)||(40449408-40449450)
chr7 (57-143)||(42629200-42629285)
chr7 (726-792)||(46263804-46263870)
chr7 (223-265)||(48639061-48639103)
chr7 (726-783)||(9396165-9396222)
chr7 (726-783)||(27712196-27712253)
chr7 (40-116)||(42627449-42627526)
chr7 (726-783)||(45419143-45419200)
chr7 (229-265)||(16491663-16491699)
chr7 (599-663)||(18487850-18487914)
chr7 (726-778)||(24788578-24788630)
chr7 (13-121)||(31882911-31883018)
chr7 (696-783)||(34838060-34838146)
chr7 (234-265)||(35125514-35125545)
chr7 (223-262)||(40686200-40686239)
chr7 (223-265)||(2852872-2852914)
chr7 (223-261)||(4680557-4680595)
chr7 (223-265)||(9141033-9141075)
chr7 (223-265)||(21225063-21225105)
chr7 (129-167)||(23284777-23284815)
chr7 (39-81)||(23311084-23311126)
chr7 (223-261)||(24787399-24787437)
chr7 (223-257)||(27711981-27712015)
chr7 (223-265)||(30991680-30991722)
chr7 (805-851)||(41279012-41279057)
chr7 (105-170)||(8229624-8229689)
chr7 (291-344)||(11642244-11642297)
chr7 (726-783)||(16672051-16672108)
chr7 (726-783)||(17646419-17646476)
chr7 (696-749)||(21128634-21128686)
chr7 (599-668)||(21224982-21225051)
chr7 (884-940)||(24788783-24788840)
chr7 (726-783)||(28170392-28170449)
chr7 (130-175)||(34328636-34328681)
chr7 (42-79)||(40143877-40143914)
chr7 (696-749)||(41279250-41279303)
chr7 (726-783)||(48640546-48640603)
[»] scaffold0013 (4 HSPs)
scaffold0013 (570-678)||(103040-103148)
scaffold0013 (290-344)||(127561-127615)
scaffold0013 (726-783)||(102947-103004)
scaffold0013 (293-344)||(104912-104963)
[»] scaffold0504 (1 HSPs)
scaffold0504 (290-341)||(1434-1485)
[»] scaffold0001 (2 HSPs)
scaffold0001 (9-80)||(185393-185464)
scaffold0001 (725-786)||(196270-196331)
[»] scaffold0018 (1 HSPs)
scaffold0018 (290-344)||(163485-163540)
[»] scaffold1155 (1 HSPs)
scaffold1155 (290-344)||(581-635)
[»] scaffold0345 (1 HSPs)
scaffold0345 (290-344)||(9582-9636)
[»] scaffold0320 (1 HSPs)
scaffold0320 (290-344)||(14291-14345)
[»] scaffold0105 (1 HSPs)
scaffold0105 (290-344)||(29344-29398)
[»] scaffold1107 (1 HSPs)
scaffold1107 (40-142)||(1921-2025)
[»] scaffold0012 (1 HSPs)
scaffold0012 (129-180)||(36155-36206)
[»] scaffold0240 (1 HSPs)
scaffold0240 (290-339)||(13598-13647)
[»] scaffold0368 (1 HSPs)
scaffold0368 (882-987)||(331-439)
[»] scaffold0067 (1 HSPs)
scaffold0067 (40-139)||(15985-16085)
[»] scaffold0097 (4 HSPs)
scaffold0097 (223-262)||(13440-13479)
scaffold0097 (731-783)||(13204-13256)
scaffold0097 (599-674)||(13351-13426)
scaffold0097 (696-754)||(13259-13316)
[»] scaffold0059 (1 HSPs)
scaffold0059 (293-344)||(71102-71153)
[»] scaffold0294 (1 HSPs)
scaffold0294 (604-674)||(12234-12304)
[»] scaffold0007 (1 HSPs)
scaffold0007 (104-141)||(232390-232427)


Alignment Details
Target: chr8 (Bit Score: 376; Significance: 0; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 376; E-Value: 0
Query Start/End: Original strand, 443 - 1067
Target Start/End: Original strand, 13461385 - 13462016
Alignment:
Q  443 acaaaactaaataggaagatggccaatattggtgtaaacacctcaaactaaaaactaaaaacgcgaaaaggatattccaattctnnnnnnnnntatgcat 542  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||    
T  13461385 acaaaactaaataggaagacggccaatattggtgtaaacacctcaaactaaaaactaaaaacgcgaaaaggatattccaattctaaaaaaaaatatgcat 13461484  T
Q  543 atcgataaaatgcatgttaaattagaataccagttaagcagtggtatgagaggaaggttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaa 642  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13461485 atcgataaaatgcatgttaaattagaataccagttaagtagtggtatgagaggaaggttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaa 13461584  T
Q  643 aatatgtgattcttttgttgtctgtgtaatttaccaaggtttatgnnnnnnnn-agagaaacacggtatagggtttgctatatatagccgagtttacatg 741  Q
    |||||||||||||||  ||||||||||||||||||| ||||||||         ||||||||| ||||||||||||| ||||||||||||||||||||||    
T  13461585 aatatgtgattctttaattgtctgtgtaatttaccacggtttatgtttttttttagagaaacatggtatagggtttg-tatatatagccgagtttacatg 13461683  T
Q  742 gaaattagtgtattctgtttttaaatgtattaaataagtgtacaacaactt-gccaaaagaagtcaatagatatatacaaaccaatgacacaacatgata 840  Q
    |||||||| ||||||  ||||||||||||||||||||||||||||||||||  | |||| ||||||||||||||||||||| ||||||||||||||||||    
T  13461684 gaaattagggtattcattttttaaatgtattaaataagtgtacaacaacttatcaaaaaaaagtcaatagatatatacaaa-caatgacacaacatgata 13461782  T
Q  841 ggaatgaaaaactcatgagtgaggagaaataataagggattgctgcattttagagggaatttgtt-gggtaaattgctgctaacctaatgcagcatttta 939  Q
    |||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  13461783 ggaatgaaaaactcatgagtgaggagaaat-attagggattgttgcattttagagggaatttgttaggttaaattgctgctaacctaatgcagcatttta 13461881  T
Q  940 gagggaaattagta-gttaacttgttgc-gatctaataaaattaataaatggagattaaaatttta--ttggnnnnnnntattacttttgat-aagtagc 1034  Q
    |||||||||||||| |||||||||||||  |||||||||||||||||||||   || |||||||||  ||||       ||||||||||||| ||||| |    
T  13461882 gagggaaattagtaggttaacttgttgcaaatctaataaaattaataaatgagaataaaaattttattttggaaaaaaatattacttttgataaagtaac 13461981  T
Q  1035 gattaca-aacttttta-taaaaacttacctattt 1067  Q
    ||||||| ||||||||| ||||||||||| |||||    
T  13461982 gattacacaactttttattaaaaacttacttattt 13462016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 346 - 678
Target Start/End: Original strand, 31248706 - 31249037
Alignment:
Q  346 ataaggttttgaacgaaacaaaattctgattaagttcaaaaaacatgacattacacgacacagtctcaatccttagataatagaccaagaaattgcgaca 445  Q
    |||||||||||||| ||||||| ||| ||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  31248706 ataaggttttgaacaaaacaaatttcagattacgttcaaaaaatatgacattacacgacacagtctgaatccttagataatagaccaagaaattgtgaca 31248805  T
Q  446 aaactaaataggaagatggccaatattggtgtaaacacctcaaactaaaaactaaaaacgcgaaaaggatattccaattct-nnnnnnnnntatgcatat 544  Q
    ||||||||||| ||||  ||||| ||||||||||||| |||||||||||||| ||||| || |||||||||||||||||||          |||||| ||    
T  31248806 aaactaaatagaaagactgccaaaattggtgtaaacatctcaaactaaaaacaaaaaatgcaaaaaggatattccaattctcaaaaaaaaatatgcagat 31248905  T
Q  545 cgataaaatgcatgttaaattagaataccagttaagcagtggtatgagaggaaggttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaa 644  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||    
T  31248906 cgataaaatgcatgttaaattagaata--agttaagcagtggtatgagaggaaggttgtaaggtcacgtccttccatttgcaaaactcaaaatatcaaaa 31249003  T
Q  645 tatgtgattcttttgttgtctgtgtaatttacca 678  Q
    ||| |||||||| |||||| ||||||||||||||    
T  31249004 tatatgattcttctgttgtttgtgtaatttacca 31249037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 31 - 265
Target Start/End: Original strand, 13461133 - 13461367
Alignment:
Q  31 cagtgttgtcgaaaatatccctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgacttaagtcacgccacgcga 130  Q
    |||||||| ||||||||||| |||||||||||| ||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  13461133 cagtgttgccgaaaatatccatgcgctagttaattaacgcaagtataaaaaatacgagacttagtttttacacatgcgtgacttaagtcacgccacgcga 13461232  T
Q  131 gttaactcacgcacgtgttaatttcagcgtgagttaactcccgcagcgtgttaacctgcgtcgcacgggtttatcattaagggattgacaatttgacata 230  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  13461233 gttaactcacgcacgtgttaatttcagcgtgagttaactcacgtagcgtgttaacctgcgtcgcacgagtttatcattaagggattgacaatttaacata 13461332  T
Q  231 caaataataaaatgcaatatataattggtaacggt 265  Q
    |||||||||||||||||||||||||||||||||||    
T  13461333 caaataataaaatgcaatatataattggtaacggt 13461367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 729 - 985
Target Start/End: Original strand, 31249157 - 31249423
Alignment:
Q  729 ccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgtacaacaacttgccaaaagaagt---------caatagatatataca 819  Q
    |||||||| |||||||||||| ||||||||||| |||| |||||||||||||||||||||| |||  |||| ||||         |||||||||||||||    
T  31249157 ccgagtttgcatggaaattagggtattctgtttgtaaacgtattaaataagtgtacaacaatttgtaaaaaaaagtatacagaaacaatagatatataca 31249256  T
Q  820 aaccaatgacacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctgcattttagagggaatttgttgggt-aaattgctg 918  Q
    ||| | |||||||||| |||||||||||||| ||||| |||||||||||||| || ||||||||||||||||| |  |||||| || ||| |||||| ||    
T  31249257 aacga-tgacacaacaggataggaatgaaaagctcataagtgaggagaaatatta-gggattgctgcattttatatagaattttttaggttaaattgttg 31249354  T
Q  919 ctaacctaatgcagcattttagagggaaattagta-gttaacttgttgc-gatctaataaaattaataa 985  Q
    |||||||||||||||||||||||||||||||| || ||||| ||| ||| |||||||||||||||||||    
T  31249355 ctaacctaatgcagcattttagagggaaattattatgttaagttgatgcagatctaataaaattaataa 31249423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 726 - 905
Target Start/End: Original strand, 38294775 - 38294951
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgtacaacaacttgccaaaagaagtcaatagatatatacaaaccaa 825  Q
    ||||||||||| ||| |||||||| ||||||||||| |||| |||||||||||||||| || ||   | | | | ||  |||||||||||||||||| |     
T  38294775 tagccgagtttgcatagaaattagggtattctgtttgtaaacgtattaaataagtgtaaaaaaaaaagtctacataaa-caatagatatatacaaacga- 38294872  T
Q  826 tgacacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctgcattttagagggaatttgtt 905  Q
    ||||||||||  ||| |||||||||  |||| |||||||||||||| || ||||||||||||||||||||||||||||||    
T  38294873 tgacacaacagaatatgaatgaaaagttcatcagtgaggagaaatatta-gggattgctgcattttagagggaatttgtt 38294951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 42 - 143
Target Start/End: Complemental strand, 7130716 - 7130615
Alignment:
Q  42 aaaatatccctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgacttaagtcacgccacgcgagttaactcacg 141  Q
    |||||| ||||| | ||||||||||| |||||||||||||||| | |||||||||||||| |||||||||||||||||||||  |  |||||||||||||    
T  7130716 aaaatacccctgtgttagttaactaacgcaagtgtaaaaaataaacgacttagtttttacgcatgcgtgacttaagtcacgctgcatgagttaactcacg 7130617  T
Q  142 ca 143  Q
    ||    
T  7130616 ca 7130615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 603964 - 604018
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  603964 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 604018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 289 - 344
Target Start/End: Complemental strand, 1852512 - 1852457
Alignment:
Q  289 ggtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  1852512 ggtgataatccataatagacaaaataaaacacttcataaaatgtataaaatctgaa 1852457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 1199836 - 1199782
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  1199836 gtgataatccatagtagacaaaataaaacacttcataaaatgtatgaaatctgaa 1199782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 3990788 - 3990734
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3990788 gtgataatccatagtagacaaaataaaacacttcataaaatgtatgaaatctgaa 3990734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 31247914 - 31247968
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  31247914 gtgataatccatagtagacaaaataaaacacttcattaaatgtataaaatctgaa 31247968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 32063205 - 32063151
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  32063205 gtgataatccatagtagacaaaataaaacacttcataaaatgtatgaaatctgaa 32063151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 39870840 - 39870950
Alignment:
Q  11 cacaaaacactcgcgcccttcagtgttgtcgaaaatatccctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtg 110  Q
    ||||||||||| ||| | | |||| ||| | ||||||||| |||||||||||||||| |||||||||||||| ||   ||||| ||||||||||||||||    
T  39870840 cacaaaacacttgcgtcttgcagtcttgcccaaaatatccttgcgctagttaactaacgcaagtgtaaaaaaaacggaacttaatttttacacatgcgtg 39870939  T
Q  111 acttaagtcac 121  Q
    |||||| ||||    
T  39870940 acttaaatcac 39870950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 42 - 142
Target Start/End: Original strand, 7130086 - 7130186
Alignment:
Q  42 aaaatatccctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgacttaagtcacgccacgcgagttaactcacg 141  Q
    |||||||| ||||||||||||| |||  ||||||||||| | |   ||||||||||||| ||||||||||||||||||||||  || |||||||||||||    
T  7130086 aaaatatctctgcgctagttaattaatacaagtgtaaaagaaaattgacttagtttttatacatgcgtgacttaagtcacgctgcgtgagttaactcacg 7130185  T
Q  142 c 142  Q
    |    
T  7130186 c 7130186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 51 - 151
Target Start/End: Complemental strand, 42432134 - 42432034
Alignment:
Q  51 ctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgacttaagtcacgccacgcgagttaactcacgcacgtgtta 150  Q
    ||||||||||||| ||  ||||||||||||||||   |||||| |||||||| |||||||| ||||||||||| ||  ||||||||||||||| ||||||    
T  42432134 ctgcgctagttaattagcgcaagtgtaaaaaataagggacttaatttttacatatgcgtgatttaagtcacgctacatgagttaactcacgcaggtgtta 42432035  T
Q  151 a 151  Q
    |    
T  42432034 a 42432034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 289 - 344
Target Start/End: Complemental strand, 1851367 - 1851312
Alignment:
Q  289 ggtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  1851367 ggtgataattcataatagacaaaataaaacacttcataaaatgtataaaatctgaa 1851312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 291 - 340
Target Start/End: Original strand, 37197394 - 37197443
Alignment:
Q  291 tgataatccatagtagacaaaataaaacacttcataaaatgtataaaatc 340  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37197394 tgataatccatagtagacaaaataaaacacttcataaaatgtacaaaatc 37197443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 710 - 782
Target Start/End: Original strand, 27853193 - 27853265
Alignment:
Q  710 tagggtttgctatatatagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgt 782  Q
    ||||| ||| |||||||| || |||||||||||||||||| ||||||||||| |||| |||||||||||||||    
T  27853193 tagggcttggtatatataaccaagtttacatggaaattagggtattctgtttgtaaacgtattaaataagtgt 27853265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 882 - 987
Target Start/End: Original strand, 38294967 - 38295075
Alignment:
Q  882 gctgcattttagagggaatttgttgggt-aaattgctgctaacctaatgcagcattttagagggaaattagta-gttaacttgttgc-gatctaataaaa 978  Q
    ||||||||||||| | |||||||| ||| |||||||||||||||||||| |||||||||||| ||||||| || | ||| | ||||| ||||| ||||||    
T  38294967 gctgcattttagatgaaatttgttaggttaaattgctgctaacctaatgtagcattttagagagaaattattaggctaagtggttgcagatctgataaaa 38295066  T
Q  979 ttaataaat 987  Q
    |||||||||    
T  38295067 ttaataaat 38295075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 3458850 - 3458904
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||| ||||    
T  3458850 gtgataatccatagtagacaaaataaaacacttcttaaaatgtatgaaatatgaa 3458904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 30206567 - 30206525
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  30206567 ttgacatacaaataataaaatgcaatatataattggtaacggt 30206525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 44015123 - 44015069
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||| ||||||||||||||||||||| |||||||||||||| |||||||||    
T  44015123 gtgataattcatagtagacaaaataaaacatttcataaaatgtatgaaatctgaa 44015069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 726 - 783
Target Start/End: Complemental strand, 13797803 - 13797746
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| ||||||||||||| |||||||||| |||| ||||||||||||||||    
T  13797803 tagccgagtttgcatggaaattagtatattctgtttgtaaacgtattaaataagtgta 13797746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 726 - 783
Target Start/End: Complemental strand, 30206347 - 30206290
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| |||||||||||| ||||||||||| |||| ||||||||||||||||    
T  30206347 tagccgagtttgcatggaaattagggtattctgtttgtaaacgtattaaataagtgta 30206290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 825 - 905
Target Start/End: Original strand, 39616877 - 39616956
Alignment:
Q  825 atgacacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctgcattttagagggaatttgtt 905  Q
    ||||||||||||||| |||||||||| ||||| ||||||||||||| || ||||||  | ||||||||| |||||||||||    
T  39616877 atgacacaacatgatgggaatgaaaagctcatcagtgaggagaaat-attagggatcacggcattttagtgggaatttgtt 39616956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 140
Target Start/End: Complemental strand, 39872314 - 39872184
Alignment:
Q  8 caacacaaaacactcgcgcccttcagtgttgtcgaaaatatccctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgc 107  Q
    |||||||||||| |||| |||| |||  |||   ||||||||| ||||||  |||||||| |||||||||||||| ||  |||||| ||||||||||||     
T  39872314 caacacaaaacattcgcaccctgcagccttgctcaaaatatcc-tgcgctgattaactaacgcaagtgtaaaaaa-acgggacttaatttttacacatgt 39872217  T
Q  108 gtgacttaagtcacgccacgcgagttaactcac 140  Q
    ||||||||||||||||  |  ||||||||||||    
T  39872216 gtgacttaagtcacgctgcatgagttaactcac 39872184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 603907 - 603949
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  603907 ttgacatacgaataataaaatgcaatatataattggtaacggt 603949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 9389544 - 9389502
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  9389544 ttgacatacgaataataaaatgcaatatataattggtaacggt 9389502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 30436942 - 30436996
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||||||||||||||| |||| |||||||||||| |||| ||||    
T  30436942 gtgataatccatagtagacaaaataaagcactacataaaatgtatcaaatttgaa 30436996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 726 - 783
Target Start/End: Complemental strand, 3990658 - 3990601
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| |||| ||||||| ||||||||||| |||| ||||||||||||||||    
T  3990658 tagccgagtttgcatgaaaattagggtattctgtttgtaaacgtattaaataagtgta 3990601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 42 - 123
Target Start/End: Complemental strand, 23769134 - 23769054
Alignment:
Q  42 aaaatatccctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgacttaagtcacgc 123  Q
    ||||||||| |||||||||||||||| |||| ||||||||| ||  |||||||||||||||||||  | |||||| ||||||    
T  23769134 aaaatatccatgcgctagttaactaacgcaaatgtaaaaaa-acgtgacttagtttttacacatgtattacttaactcacgc 23769054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 42 - 120
Target Start/End: Original strand, 42431626 - 42431706
Alignment:
Q  42 aaaatatccctgcgctagttaactaaagcaagtgtaaaaaatacaag--acttagtttttacacatgcgtgacttaagtca 120  Q
    |||||||||||||| |||||||||||  ||| | ||||||| | |||  | ||||||||||||||||||||||||||||||    
T  42431626 aaaatatccctgcgttagttaactaacacaaatataaaaaaaataagggatttagtttttacacatgcgtgacttaagtca 42431706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 50 - 123
Target Start/End: Complemental strand, 45156461 - 45156388
Alignment:
Q  50 cctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgacttaagtcacgc 123  Q
    |||||| |||||||||||  ||||||||||||| ||   | ||| |||||||||||||||||||||||||||||    
T  45156461 cctgcgttagttaactaacacaagtgtaaaaaaaacggaatttaatttttacacatgcgtgacttaagtcacgc 45156388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 263
Target Start/End: Original strand, 23959945 - 23959985
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacg 263  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  23959945 ttgacatacgaataataaaatgcaatatataattggtaacg 23959985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 263
Target Start/End: Complemental strand, 38111754 - 38111714
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacg 263  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  38111754 ttgacatacgaataataaaatgcaatatataattggtaacg 38111714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 698 - 749
Target Start/End: Original strand, 38294721 - 38294772
Alignment:
Q  698 agaaacacggtatagggtttgctatatatagccgagtttacatggaaattag 749  Q
    ||||||||||| ||||||||||||||||||| |||||||  |||||||||||    
T  38294721 agaaacacggtttagggtttgctatatatagtcgagtttgtatggaaattag 38294772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 329
Target Start/End: Complemental strand, 44429862 - 44429823
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaa 329  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  44429862 gtgataatccataatagacaaaataaaacacttcataaaa 44429823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 329
Target Start/End: Complemental strand, 44433597 - 44433558
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaa 329  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  44433597 gtgataatccataatagacaaaataaaacacttcataaaa 44433558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 3458794 - 3458836
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| ||||||||||||||||||||||| |||||||||    
T  3458794 ttgacatacgaataataaaatgcaatatataataggtaacggt 3458836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 14683453 - 14683411
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| ||||||||||||||||| |||||||||||||||    
T  14683453 ttgacatacgaataataaaatgcaatacataattggtaacggt 14683411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 35618063 - 35618021
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| ||||||||||||||||||||||||| |||||||    
T  35618063 ttgacatacgaataataaaatgcaatatataattgataacggt 35618021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 42046051 - 42045997
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||| |||||||||||||||||| |||||| |||||||||| |||| ||||    
T  42046051 gtgataattcatagtagacaaaataaagcacttcctaaaatgtatgaaatatgaa 42045997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 44434651 - 44434609
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| ||||||||||||||| |||||||||||||||||    
T  44434651 ttgacatacgaataataaaatgcaaaatataattggtaacggt 44434609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 142
Target Start/End: Original strand, 45155981 - 45156071
Alignment:
Q  52 tgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgacttaagtcacgccacgcgagttaactcacgc 142  Q
    ||||||| ||||||||   ||||||||||||||    ||||| |||||||||||||||||||||| ||||||  |  ||||||||||||||    
T  45155981 tgcgctaattaactaacataagtgtaaaaaataaggaacttaatttttacacatgcgtgacttaaatcacgctgcatgagttaactcacgc 45156071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 726 - 783
Target Start/End: Original strand, 30437633 - 30437690
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| |||||||||||  ||||| ||||| |||| ||||||||||||||||    
T  30437633 tagccgagtttgcatggaaattatggtattttgtttgtaaacgtattaaataagtgta 30437690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 140
Target Start/End: Original strand, 1797694 - 1797793
Alignment:
Q  40 cgaaaatatccctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgacttaagtcacgccacgcgagttaactca 139  Q
    |||||||| ||||||| ||||||||||| |||  |||||||   ||| ||| || |||||||||||| ||||||||||||||||  ||  ||||||||||    
T  1797694 cgaaaata-ccctgcgttagttaactaacgcagatgtaaaattaacatgacataatttttacacatgtgtgacttaagtcacgctgcgtaagttaactca 1797792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 265
Target Start/End: Original strand, 30436884 - 30436928
Alignment:
Q  221 atttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||||| ||||||||| ||||||||||||||| |||||||    
T  30436884 atttgacatacgaataataaagtgcaatatataattgataacggt 30436928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 262
Target Start/End: Complemental strand, 23086423 - 23086384
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaac 262  Q
    |||||||||  |||||||||||||||||||||||||||||    
T  23086423 ttgacatacggataataaaatgcaatatataattggtaac 23086384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 262
Target Start/End: Complemental strand, 42046107 - 42046068
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaac 262  Q
    ||||||||| ||||||||||||||||||||||| ||||||    
T  42046107 ttgacatacgaataataaaatgcaatatataataggtaac 42046068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 703 - 749
Target Start/End: Original strand, 31249105 - 31249151
Alignment:
Q  703 cacggtatagggtttgctatatatagccgagtttacatggaaattag 749  Q
    |||||| ||||||||||||||||||||||| ||  ||||||||||||    
T  31249105 cacggtttagggtttgctatatatagccgacttcgcatggaaattag 31249151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 37197337 - 37197379
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    |||| |||| ||||||||||||||||||||||| |||||||||    
T  37197337 ttgatatacgaataataaaatgcaatatataataggtaacggt 37197379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 261
Target Start/End: Original strand, 39921885 - 39921923
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaa 261  Q
    ||||||||| ||||||||||||||||||||||| |||||    
T  39921885 ttgacatacgaataataaaatgcaatatataataggtaa 39921923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 734 - 783
Target Start/End: Complemental strand, 14683258 - 14683209
Alignment:
Q  734 tttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||||||||  |||||||||| ||||  |||||||||||||||    
T  14683258 tttacatggaaattaggatattctgtttgtaaacatattaaataagtgta 14683209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 263
Target Start/End: Complemental strand, 32063258 - 32063221
Alignment:
Q  226 acatacaaataataaaatgcaatatataattggtaacg 263  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  32063258 acatacgaataataaaatgcaatatataataggtaacg 32063221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 599 - 668
Target Start/End: Original strand, 34588524 - 34588593
Alignment:
Q  599 gttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaatatgtgattcttttgttgtctgtg 668  Q
    |||| ||||||||||| ||||| |||||||  || |||||||||||||| ||||| || |||||| ||||    
T  34588524 gttgtaaggtcacgtctttccatttgcaaagctctaaatatcaaaatatatgatttttgtgttgtgtgtg 34588593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 34948286 - 34948245
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacgg 264  Q
    ||||||||| |||||||||||| ||||||||||||| |||||    
T  34948286 ttgacatacgaataataaaatgtaatatataattgggaacgg 34948245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 916 - 987
Target Start/End: Original strand, 39617010 - 39617083
Alignment:
Q  916 ctgctaacctaatgcagcattttagagggaaattagt-agttaacttgttgc-gatctaataaaattaataaat 987  Q
    ||||||| |||||||||||||||||||| |||||| | | |||| ||||||| |  ||||||||||||||||||    
T  39617010 ctgctaatctaatgcagcattttagaggaaaattattaacttaagttgttgcaggcctaataaaattaataaat 39617083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 726 - 783
Target Start/End: Complemental strand, 44014942 - 44014885
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||| ||||| |||||||||||| ||||||| ||| |||| ||||| ||||||||||    
T  44014942 tagccaagtttgcatggaaattagggtattctatttgtaaacgtatttaataagtgta 44014885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 223; Significance: 1e-122; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 351 - 749
Target Start/End: Complemental strand, 7780161 - 7779761
Alignment:
Q  351 gttttgaacgaaacaaaattctgattaagttcaaaaaacatgacattacacgacacagtctcaatccttagataatagaccaagaaattgcgacaaaact 450  Q
    |||||||| |||| ||||||| |||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  7780161 gttttgaatgaaataaaattcagattaagttcaaaaaacatgacataacacggcacagtctgaatccttagataatagaccaagaaattgcgacaaaact 7780062  T
Q  451 aaataggaagatggccaatattggtgtaaacacctcaaactaaaaactaaaaa-cgcgaaaaggatattccaattctnnnnnnnnntatgcatatcgata 549  Q
    |||||||||||| ||||| ||||||||||||| |||||||||||||| ||||| ||| ||| |||||||||||||||         ||||||||||||||    
T  7780061 aaataggaagattgccaagattggtgtaaacatctcaaactaaaaacaaaaaaacgcaaaatggatattccaattctcacaaaaa-tatgcatatcgata 7779963  T
Q  550 aaatgcatgttaaattagaataccagttaagcagtggtatgagaggaaggttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaatatgt 649  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |    
T  7779962 aaatgcatgttaaattagaataccagttaagcagcggtatgagaggaaggttgtaaggtcacgtccttccatttgcaaaaatcaaaatatcaaaatatat 7779863  T
Q  650 gattcttttgttgtctgtgtaatttaccaaggtttatg--nnnnnnnnagagaaacacggtatagggtttgctatatatagccgagtttacatggaaatt 747  Q
    ||||||| | ||||||||||||||||||| ||||||||          | ||||||||||| ||| ||||| |||||||| |||||||| |||| |||||    
T  7779862 gattcttcttttgtctgtgtaatttaccacggtttatgtttttttctgaaagaaacacggtttagagtttgttatatatatccgagtttgcatgaaaatt 7779763  T
Q  748 ag 749  Q
    ||    
T  7779762 ag 7779761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 14410900 - 14410769
Alignment:
Q  8 caacacaaaacactcgcgcccttcagtgttgtcgaaaatatccctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgc 107  Q
    |||||||||||||| ||||| | |||||||| |||||||| ||||||||||||||||||| || |||||||||||| |  |||||||||||||||||||     
T  14410900 caacacaaaacacttgcgccttgcagtgttgccgaaaatacccctgcgctagttaactaacgcgagtgtaaaaaattcgtgacttagtttttacacatgt 14410801  T
Q  108 gtgacttaagtcacgccacgcgagttaactca 139  Q
    ||||||||||||||||  || |||||||||||    
T  14410800 gtgacttaagtcacgctgcgtgagttaactca 14410769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 49 - 151
Target Start/End: Complemental strand, 25868597 - 25868495
Alignment:
Q  49 ccctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgacttaagtcacgccacgcgagttaactcacgcacgtgt 148  Q
    ||||||||||||||||||  |||||||||||||||| |||| |||||||||||||||||||||||||||||||||  |   |||||||||||||| ||||    
T  25868597 ccctgcgctagttaactagcgcaagtgtaaaaaataaaagatttagtttttacacatgcgtgacttaagtcacgctgcataagttaactcacgcatgtgt 25868498  T
Q  149 taa 151  Q
    |||    
T  25868497 taa 25868495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 42 - 151
Target Start/End: Original strand, 25868062 - 25868171
Alignment:
Q  42 aaaatatccctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgacttaagtcacgccacgcgagttaactcacg 141  Q
    |||||| |||| |||||||||||||| ||||||||||||||||   ||||||||||||||||||| ||||||||||||||||  |  |||||||||||||    
T  25868062 aaaataaccctacgctagttaactaacgcaagtgtaaaaaataagggacttagtttttacacatgtgtgacttaagtcacgctgcatgagttaactcacg 25868161  T
Q  142 cacgtgttaa 151  Q
    || |||||||    
T  25868162 catgtgttaa 25868171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 882 - 987
Target Start/End: Complemental strand, 7779554 - 7779446
Alignment:
Q  882 gctgcattttagagggaatttgttgggt-aaattgctgctaacctaatgcagcattttagagggaaattagta-gttaacttgttg-cgatctaataaaa 978  Q
    ||||||||||||| |||||||||  ||| ||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||  || |||||||||    
T  7779554 gctgcattttagatggaatttgtcaggttaaattgctgctaacctaatgcagcattttagagggaaattattaggttaagttgttgtagacctaataaaa 7779455  T
Q  979 ttaataaat 987  Q
    |||||||||    
T  7779454 ttaataaat 7779446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 730 - 905
Target Start/End: Complemental strand, 7779754 - 7779570
Alignment:
Q  730 cgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgtacaacaacttgccaaaagaa---gtc---------aatagatatata 817  Q
    ||||||| |||||||||||| ||||||||||| |||| ||||||| |||||||||||||||||   |||| ||   |||         ||||||||||||    
T  7779754 cgagtttgcatggaaattagggtattctgtttgtaaaagtattaa-taagtgtacaacaacttataaaaaaaaaaagtctacaaaaacaatagatatata 7779656  T
Q  818 caaaccaatgacacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctgcattttagagggaatttgtt 905  Q
    ||||| | ||||||||||  ||| ||||||||| ||||| |||||||||||||| || ||||||| ||||||||||||||||||||||    
T  7779655 caaacga-tgacacaacaatatatgaatgaaaagctcattagtgaggagaaatatta-gggattgttgcattttagagggaatttgtt 7779570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 23141356 - 23141302
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  23141356 gtgataatccatagtagacaaaataaaacacttcataaaatgtatgaaatctgaa 23141302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 40018064 - 40018133
Alignment:
Q  11 cacaaaacactcgcgcccttcagtgttgtcgaaaatatccctgcgctagttaactaaagcaagtgtaaaa 80  Q
    ||||||||||||||||||| ||||||||||||||||| || |||| ||||||||||| ||||||||||||    
T  40018064 cacaaaacactcgcgccctgcagtgttgtcgaaaatacccatgcgttagttaactaacgcaagtgtaaaa 40018133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 696 - 986
Target Start/End: Complemental strand, 3433302 - 3432997
Alignment:
Q  696 agagaaacacggtatagggtttgctatatatagccgagtttacatggaaattagtgtattc-tgtttttaaatgtattaaataagtgtacaacaacttgc 794  Q
    ||||||||||||| || ||||||| ||||||| |||||||| |||||| ||||| |||  |  |||| |||| |||| |||||||||||||||||||||     
T  3433302 agagaaacacggtttatggtttgcaatatatacccgagtttgcatggacattagagtagccgagtttgtaaacgtatcaaataagtgtacaacaacttgt 3433203  T
Q  795 caaaaga-------------agtcaatagatatatacaaaccaatgacacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggatt 881  Q
     |||| |             |  || |||||||||||||| | |||||||||||||||| ||| ||||| ||||  ||||||||||||| |  ||||| |    
T  3433202 aaaaaaaaaaaaatctacagaaacagtagatatatacaaa-cgatgacacaacatgatatgaacgaaaagctcaccagtgaggagaaat-accagggact 3433105  T
Q  882 gctgcattttagagggaatttgtt-gggtaaattgctgctaacctaatgcagcattttagagggaaattagta-gttaacttgttgc-gatctaataaaa 978  Q
    | |||||||||| |||||||| ||    ||||||||| || ||||||||||  |||||||||| |||||| || ||||| |||||||  |||||||||||    
T  3433104 gttgcattttagtgggaatttattatcttaaattgctactgacctaatgcaaaattttagaggaaaattattaggttaagttgttgcaaatctaataaaa 3433005  T
Q  979 ttaataaa 986  Q
    ||||||||    
T  3433004 ttaataaa 3432997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 726 - 928
Target Start/End: Complemental strand, 14854560 - 14854347
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgtacaacaacttgcc----aaaagaagt---------caatagat 812  Q
    ||||||||||| |||||||||||  ||||| ||||| |||| ||||||||||||||||||| |||||| |    |||| ||||         ||||||||    
T  14854560 tagccgagtttgcatggaaattaaggtattttgtttgtaaacgtattaaataagtgtacaataacttgtcaaaaaaaaaaagtctacataaacaatagat 14854461  T
Q  813 atatacaaaccaatgacacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctgcattttagagggaatttgtt-gggtaa 911  Q
    ||||||||| | ||||||||||| |||||||||||||| ||||| ||  | ||||||| || ||||||||| ||||||||||||||| || || || |||    
T  14854460 atatacaaa-cgatgacacaacaagataggaatgaaaagctcat-agcaaagagaaat-attagggattgcagcattttagagggaaattattaggttaa 14854364  T
Q  912 attgctgctaacctaat 928  Q
     ||||||| ||||||||    
T  14854363 gttgctgcaaacctaat 14854347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 7672843 - 7672897
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  7672843 gtgataatccatagtagacaaaataaaacacttcataaaatgtatgaaatatgaa 7672897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 14164306 - 14164360
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  14164306 gtgataatccatagtagacaaaataaaacacttcataaaatatatgaaatctgaa 14164360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 16529342 - 16529288
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  16529342 gtgataatccatagtagacaaaataaaacacttcataaaatatatgaaatctgaa 16529288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 19123490 - 19123436
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  19123490 gtgataatccatagtagacaaaataaaacacttaataaaatgtatgaaatctgaa 19123436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 41092367 - 41092421
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  41092367 gtgataattcatagtagacaaaataaaacacttcataaaatgtatgaaatctgaa 41092421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 50 - 143
Target Start/End: Original strand, 14410201 - 14410293
Alignment:
Q  50 cctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgacttaagtcacgccacgcgagttaactcacgca 143  Q
    ||||||||||||| | || |||||||||||||| |   ||||||||||||| ||||||||||||||||||||||  || |||||||||||||||    
T  14410201 cctgcgctagttagccaacgcaagtgtaaaaaa-atgtgacttagtttttatacatgcgtgacttaagtcacgctgcgtgagttaactcacgca 14410293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 290 - 343
Target Start/End: Original strand, 43394665 - 43394718
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctga 343  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  43394665 gtgataatccaaagtagacaaaataaaacacttcataaaatgtatgaaatctga 43394718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 290 - 342
Target Start/End: Complemental strand, 10409913 - 10409861
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctg 342  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  10409913 gtgataatccatagtaggcaaaataaaacacttcataaaatgtatgaaatctg 10409861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 290 - 342
Target Start/End: Complemental strand, 16538181 - 16538129
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctg 342  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  16538181 gtgataattcatagtagacaaaataaaacacttcatacaatgtataaaatctg 16538129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 14410738 - 14410789
Alignment:
Q  129 gagttaactcacgcacgtgttaatttcagcgtgagttaactcccgcagcgtg 180  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  14410738 gagttaactcacgcacgtgttaatttcagcatgagttaactcacgcagcgtg 14410789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 290 - 343
Target Start/End: Complemental strand, 35160091 - 35160038
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctga 343  Q
    ||||||||| |||||||| |||||||||||||||||||||||||| ||||||||    
T  35160091 gtgataatctatagtagataaaataaaacacttcataaaatgtatgaaatctga 35160038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 726 - 783
Target Start/End: Complemental strand, 41511513 - 41511457
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||    
T  41511513 tagccgagtttgcatggaaattag-gtattctgtttttaaaagtattaaataagtgta 41511457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 726 - 778
Target Start/End: Complemental strand, 23141104 - 23141052
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataa 778  Q
    ||||||||||| |||||||||||||||||||||||| |||| |||||||||||    
T  23141104 tagccgagtttgcatggaaattagtgtattctgtttgtaaacgtattaaataa 23141052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 342
Target Start/End: Original strand, 38004136 - 38004184
Alignment:
Q  294 taatccatagtagacaaaataaaacacttcataaaatgtataaaatctg 342  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||    
T  38004136 taattcatagtagacaaaataaaacacttcataaaatgtatcaaatctg 38004184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 726 - 785
Target Start/End: Complemental strand, 5398249 - 5398190
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgtaca 785  Q
    ||||||||||| |||||||||||| ||||||||||| |||| ||||||||||||| ||||    
T  5398249 tagccgagtttgcatggaaattagggtattctgtttgtaaacgtattaaataagtttaca 5398190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 720 - 783
Target Start/End: Complemental strand, 19322630 - 19322567
Alignment:
Q  720 tatatatagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    |||||||| || | |||||||||||||||| ||||||||||| |||| ||||||||||||||||    
T  19322630 tatatataaccaaatttacatggaaattagggtattctgtttgtaaacgtattaaataagtgta 19322567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 7732893 - 7732839
Alignment:
Q  96 ttttacacatgcgtgacttaagtcacgccacgcgagttaactcacgcacgtgtta 150  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| | ||||||    
T  7732893 ttttacacatgcgtgacttaagtcacgccacatgagttaactcacgtaggtgtta 7732839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 9487374 - 9487416
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  9487374 ttgacatacaaataataaaatgcaatatataattgataacggt 9487416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 142
Target Start/End: Complemental strand, 17854810 - 17854724
Alignment:
Q  57 tagttaactaaagcaagtgtaaaaaata-caagacttagtttttacacatgcgtgacttaagtcacgccacgcgagttaactcacgc 142  Q
    ||||||||||| |||||||||||||| | |  || ||||||||||||||||||||||||| ||||| |  || ||||||||||||||    
T  17854810 tagttaactaacgcaagtgtaaaaaaaaacttgagttagtttttacacatgcgtgacttaggtcacactgcgtgagttaactcacgc 17854724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 19123544 - 19123502
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  19123544 ttgacatacaaataataaaatgtaatatataattggtaacggt 19123502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 26522808 - 26522862
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||  ||||||||||||||||||||||||||||||||||| |||| ||||    
T  26522808 gtgataatatatagtagacaaaataaaacacttcataaaatgtatgaaatttgaa 26522862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 38110629 - 38110587
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  38110629 ttgacatacaaataataaaatgcaatatatatttggtaacggt 38110587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 41511726 - 41511684
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  41511726 ttgacatacgaataataaaatgcaatatataattggtaacggt 41511684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 726 - 783
Target Start/End: Complemental strand, 7128064 - 7128007
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| ||| |||||||| ||||||||||| |||| ||||||||||||||||    
T  7128064 tagccgagtttgcatagaaattagagtattctgtttgtaaacgtattaaataagtgta 7128007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 6408594 - 6408677
Alignment:
Q  40 cgaaaatatccctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttt-tacacatgcgtgacttaagtcacgc 123  Q
    |||||||| ||||||| ||||||||||| | ||| |||||||| ||  |||||| |||| |||||||||||||||||||||||||    
T  6408594 cgaaaatacccctgcgttagttaactaacgtaagcgtaaaaaa-acgtgacttaattttttacacatgcgtgacttaagtcacgc 6408677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 330
Target Start/End: Complemental strand, 7129189 - 7129149
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaat 330  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  7129189 gtgataatccatagtagacaaaataaaacacttaataaaat 7129149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 143
Target Start/End: Original strand, 25994553 - 25994601
Alignment:
Q  95 tttttacacatgcgtgacttaagtcacgccacgcgagttaactcacgca 143  Q
    |||||||||||||||||||||||||||||| |  |||||||||||||||    
T  25994553 tttttacacatgcgtgacttaagtcacgccgcctgagttaactcacgca 25994601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 143
Target Start/End: Complemental strand, 32804935 - 32804887
Alignment:
Q  95 tttttacacatgcgtgacttaagtcacgccacgcgagttaactcacgca 143  Q
    |||||||||||| ||||||||||||||||| || |||||||||||||||    
T  32804935 tttttacacatgtgtgacttaagtcacgccgcgtgagttaactcacgca 32804887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 176
Target Start/End: Original strand, 17854696 - 17854743
Alignment:
Q  129 gagttaactcacgcacgtgttaatttcagcgtgagttaactcccgcag 176  Q
    |||||||||||| || |||||||||||||||||||||||||| |||||    
T  17854696 gagttaactcacacaagtgttaatttcagcgtgagttaactcacgcag 17854743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 599 - 685
Target Start/End: Complemental strand, 38110575 - 38110488
Alignment:
Q  599 gttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaatatgtgattcttt-tgttgtctgtgtaatttaccaaggttta 685  Q
    ||||||||||||| || ||||| |||||||  || |||||||||||||| ||||| ||| |||||| |||| ||||||||| ||||||    
T  38110575 gttgcaaggtcacatctttccatttgcaaagctctaaatatcaaaatatatgattttttgtgttgtgtgtgaaatttaccacggttta 38110488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 726 - 780
Target Start/End: Original strand, 9487587 - 9487641
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagt 780  Q
    ||||||||||| |||||||||||| | ||||||||| |||| |||||||||||||    
T  9487587 tagccgagtttgcatggaaattagggcattctgtttgtaaacgtattaaataagt 9487641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 726 - 780
Target Start/End: Original strand, 13104839 - 13104893
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagt 780  Q
    ||||||| ||| |||||||||||| ||||||||||| |||| |||||||||||||    
T  13104839 tagccgaatttgcatggaaattagggtattctgtttgtaaaagtattaaataagt 13104893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 14164248 - 14164290
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||  |||||||||||||||||||||||||||||||||    
T  14164248 ttgacatatgaataataaaatgcaatatataattggtaacggt 14164290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 729 - 783
Target Start/End: Complemental strand, 16305931 - 16305877
Alignment:
Q  729 ccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    |||||||| |||||||||||  ||||||||||| |||| ||||||||||||||||    
T  16305931 ccgagtttgcatggaaattaaggtattctgtttataaacgtattaaataagtgta 16305877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 16306148 - 16306106
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| |||||||||||| ||||||||||||||||||||    
T  16306148 ttgacatacgaataataaaatgtaatatataattggtaacggt 16306106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 175
Target Start/End: Complemental strand, 20419589 - 20419543
Alignment:
Q  129 gagttaactcacgcacgtgttaatttcagcgtgagttaactcccgca 175  Q
    ||||||||||||||| ||||||||| |||||||||||||||| ||||    
T  20419589 gagttaactcacgcaagtgttaattccagcgtgagttaactcacgca 20419543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 26092490 - 26092556
Alignment:
Q  14 aaaacactcgcgcccttcagtgttgtcgaaaatatccctgcgctagttaactaaagcaagtgtaaaa 80  Q
    |||||||||||||||| |||   | ||||||||| || |||||||||||||||| ||||||||||||    
T  26092490 aaaacactcgcgccctgcaggcatttcgaaaatacccttgcgctagttaactaacgcaagtgtaaaa 26092556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 41092311 - 41092353
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| ||||||||||||||||||||||| |||||||||    
T  41092311 ttgacatacgaataataaaatgcaatatataataggtaacggt 41092353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 43394609 - 43394651
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| ||||||||||||||||||||||| |||||||||    
T  43394609 ttgacatacgaataataaaatgcaatatataataggtaacggt 43394651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 696 - 749
Target Start/End: Complemental strand, 5398305 - 5398252
Alignment:
Q  696 agagaaacacggtatagggtttgctatatatagccgagtttacatggaaattag 749  Q
    ||||||||| ||| ||||||||||||||||||| ||||||| ||| ||||||||    
T  5398305 agagaaacatggtttagggtttgctatatatagtcgagtttgcatagaaattag 5398252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 25994628 - 25994587
Alignment:
Q  129 gagttaactcacgcacgtgttaatttcagcgtgagttaactc 170  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
T  25994628 gagttaactcacgcaggtgttaatttctgcgtgagttaactc 25994587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 696 - 749
Target Start/End: Original strand, 31486587 - 31486640
Alignment:
Q  696 agagaaacacggtatagggtttgctatatatagccgagtttacatggaaattag 749  Q
    ||||||||||||| ||||| ||| ||||||| ||| ||||||||||||||||||    
T  31486587 agagaaacacggtttagggcttggtatatatcgccaagtttacatggaaattag 31486640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 730 - 783
Target Start/End: Original strand, 41092501 - 41092554
Alignment:
Q  730 cgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||| |||||||||||| | ||||||||| |||| ||||||||||||||||    
T  41092501 cgagtttgcatggaaattagagcattctgtttgtaaacgtattaaataagtgta 41092554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 107
Target Start/End: Complemental strand, 16060826 - 16060779
Alignment:
Q  60 ttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgc 107  Q
    |||||||||||||||||||||||||    |||||||||||||||||||    
T  16060826 ttaactaaagcaagtgtaaaaaataaggaacttagtttttacacatgc 16060779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 262
Target Start/End: Complemental strand, 20563348 - 20563309
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaac 262  Q
    ||||||| | ||||||||||||||||||||||||||||||    
T  20563348 ttgacatgcgaataataaaatgcaatatataattggtaac 20563309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 142
Target Start/End: Complemental strand, 25994990 - 25994943
Alignment:
Q  95 tttttacacatgcgtgacttaagtcacgccacgcgagttaactcacgc 142  Q
    |||||||||||||||||||||||||||||  |  ||||||||||||||    
T  25994990 tttttacacatgcgtgacttaagtcacgctgcatgagttaactcacgc 25994943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 26522752 - 26522791
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaac 262  Q
    ||||||||| ||||||||||||||||||||||| ||||||    
T  26522752 ttgacatacgaataataaaatgcaatatataataggtaac 26522791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 599 - 674
Target Start/End: Complemental strand, 41511672 - 41511597
Alignment:
Q  599 gttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaatatgtgattcttttgttgtctgtgtaattt 674  Q
    |||| ||||||||||| ||||| |||||||| || |||||||||| ||| ||||| || |||||| |||| |||||    
T  41511672 gttgtaaggtcacgtctttccatttgcaaaactctaaatatcaaattatatgatttttgtgttgtgtgtgaaattt 41511597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 261
Target Start/End: Complemental strand, 7129247 - 7129209
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaa 261  Q
    ||||||||| |||||||||||||||||||||||| ||||    
T  7129247 ttgacatacgaataataaaatgcaatatataattagtaa 7129209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 10409969 - 10409927
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| ||||||||||||||||||||||| | |||||||    
T  10409969 ttgacatacgaataataaaatgcaatatataatagataacggt 10409927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 19322812 - 19322770
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    |||||||||  |||||||||||||||||||||||| |||||||    
T  19322812 ttgacatacggataataaaatgcaatatataattgataacggt 19322770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 696 - 749
Target Start/End: Complemental strand, 14854616 - 14854563
Alignment:
Q  696 agagaaacacggtatagggtttgctatatatagccgagtttacatggaaattag 749  Q
    ||||||||| ||| || |||||||||||||||| ||||||| |||| |||||||    
T  14854616 agagaaacatggtttacggtttgctatatatagtcgagtttgcatgaaaattag 14854563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 696 - 749
Target Start/End: Complemental strand, 14854710 - 14854657
Alignment:
Q  696 agagaaacacggtatagggtttgctatatatagccgagtttacatggaaattag 749  Q
    ||||||| | ||| ||||||||||||||||| ||||||||| |||| |||||||    
T  14854710 agagaaatatggtttagggtttgctatatatcgccgagtttgcatgaaaattag 14854657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 726 - 783
Target Start/End: Complemental strand, 19122761 - 19122705
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| |||||||||||| ||||| ||||| | || ||||||||||||||||    
T  19122761 tagccgagtttgcatggaaattagggtattttgtttgt-aacgtattaaataagtgta 19122705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 26092655 - 26092614
Alignment:
Q  129 gagttaactcacgcacgtgttaatttcagcgtgagttaactc 170  Q
    |||||||||| |||| ||||||||||| ||||||||||||||    
T  26092655 gagttaactctcgcaggtgttaatttctgcgtgagttaactc 26092614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 212; Significance: 1e-115; HSPs: 85)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 212; E-Value: 1e-115
Query Start/End: Original strand, 379 - 950
Target Start/End: Original strand, 41075264 - 41075845
Alignment:
Q  379 gttcaaaaaacatgacattacacgacacagtctcaatccttagataatagaccaagaaattgcgacaaaactaaataggaagatggccaatattggtgta 478  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |  ||||| |||||||||    
T  41075264 gttcaaaaaacatgacattacacgacacagtctaaatccttagataatagaccaagaagttgcgacaaaactaaataggaaaactgccaaaattggtgta 41075363  T
Q  479 aacacctcaaactaaaaactaaaaacgcgaaaaggatattccaattctnnnnnnnnntatgcatatcgataaaatgcatgttaaattagaataccagtta 578  Q
    |||| |||||||||||||| |||| ||| |||| ||||||  ||||||         ||||||||||||||||||||||||||||||||||||| |||||    
T  41075364 aacatctcaaactaaaaacaaaaatcgcaaaaatgatattttaattct-caaaaaaatatgcatatcgataaaatgcatgttaaattagaatactagtta 41075462  T
Q  579 agcagtggtatgagaggaaggttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaatatgtgattcttttgttgtctgtgtaatttacca 678  Q
    ||||||||||||| |||||||| | ||| ||||||||||||| ||||        |||||||||||||| |||||||| |||||||||||||||||||||    
T  41075463 agcagtggtatgacaggaaggtcgtaagatcacgtccttccatttgc--------aaatatcaaaatatatgattcttctgttgtctgtgtaatttacca 41075554  T
Q  679 aggttta------tgnnnnnnnnagagaaacacggtatagggtttgctatatatagccgagtttacatggaaattagtgtattctgtttttaaatgtatt 772  Q
     ||||||                |||||||| |||| |||||||||||||| |||||||||||| |||||||||||| ||||| ||||| |||| |||||    
T  41075555 cggtttagtttttatttttttatagagaaacgcggtttagggtttgctatacatagccgagtttgcatggaaattagagtattttgtttgtaaacgtatt 41075654  T
Q  773 aaataagtg--tacaacaacttgccaa---aagaagt---------caatagatatatacaaaccaatgacacaacatgataggaatgaaaaactcatga 858  Q
    |||||||||  || |||||||||  ||   || ||||         ||||||||||||||||| |  |||||||||||||||||||||| || ||||| |    
T  41075655 aaataagtgtatagaacaacttgtaaaaataaaaagtctacagaaacaatagatatatacaaa-cggtgacacaacatgataggaatgagaagctcatca 41075753  T
Q  859 gtgaggagaaataataagggattgctgcattttagagggaatttgtt-gggtaaattgctgctaacctaatgcagcattttagagggaaatta 950  Q
    |||| ||||||| || ||||||||||||||||||||| ||||||||| || ||||||| || |||||||||||||||||||||||| ||||||    
T  41075754 gtgaagagaaat-attagggattgctgcattttagagagaatttgttaggttaaattgttgttaacctaatgcagcattttagaggaaaatta 41075845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 346 - 685
Target Start/End: Original strand, 17929853 - 17930192
Alignment:
Q  346 ataaggttttgaacgaaacaaaattctgattaagttcaaaaaacatgacattacacgacacagtctcaatccttagataatagaccaagaaattgcgaca 445  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  17929853 ataaggttttgaacgaaacaaaattcagattaagttcaaaaaacatgacattacacgacacagtctgaatccttagataatagaacaagaaattgcgaca 17929952  T
Q  446 aaactaaataggaagatggccaatattggtgtaaacacctcaaactaaaaactaaaaacgc-gaaaaggatattccaattctnnnnnnnnntatgcatat 544  Q
    || |||||||||||||  ||||| ||||||||||||| |||||||||||||| ||||| ||  |||||||||||||||||||         || ||||||    
T  17929953 aagctaaataggaagactgccaaaattggtgtaaacatctcaaactaaaaacaaaaaatgcaaaaaaggatattccaattct-caaaaaaataagcatat 17930051  T
Q  545 cgataaaatgcatgttaaattagaataccagttaagcagtggtatgagaggaaggttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaa 644  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||| || |||||||||||||| |||||    
T  17930052 tgataaaatgcatgttaaattagaataccagttaagcagtggtatgagaggaaagttataaggtcacgtccttccattttcaaaaatcaaaataccaaaa 17930151  T
Q  645 tatgtgattcttttgttgtctgtgtaatttaccaaggttta 685  Q
    ||| |||||||| || |||||||||||||||||| ||||||    
T  17930152 tatatgattcttctgctgtctgtgtaatttaccatggttta 17930192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 720 - 950
Target Start/End: Original strand, 41075885 - 41076127
Alignment:
Q  720 tatatatagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta--caacaacttgccaaaagaa---gtc--------- 805  Q
    |||| |||||||||||| |||||||||||| |||||||||||  ||| ||||||||||||||||  ||||||||||  |||| ||   |||             
T  41075885 tatacatagccgagtttgcatggaaattagggtattctgtttgcaaacgtattaaataagtgtatacaacaacttgtaaaaataaaaagtctgcagaaac 41075984  T
Q  806 aatagatatatacaaaccaatgacacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctgcattttagagggaatttgtt 905  Q
    |||||||||||||||||   |||||||||||||||||||||| || ||||| ||||| |||||||| || |||||||||||||||||||| |||||||||    
T  41075985 aatagatatatacaaacgg-tgacacaacatgataggaatgagaagctcatcagtgaagagaaatatta-gggattgctgcattttagagagaatttgtt 41076082  T
Q  906 gggtaaattgctgctaacctaatgcagcattttagagggaaatta 950  Q
     ||| ||||| || |||||||||||||||||||||||| ||||||    
T  41076083 aggttaattgttgttaacctaatgcagcattttagaggaaaatta 41076127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 720 - 950
Target Start/End: Original strand, 41076167 - 41076410
Alignment:
Q  720 tatatatagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta--caacaacttgccaaaagaa---gtc--------- 805  Q
    |||| |||||||||||| |||||||||||| |||||||||||  ||| ||||||||||||||||  ||||||||||  |||| ||   |||             
T  41076167 tatacatagccgagtttgcatggaaattagggtattctgtttgcaaacgtattaaataagtgtatacaacaacttgtaaaaataaaaagtctgcagaaac 41076266  T
Q  806 aatagatatatacaaaccaatgacacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctgcattttagagggaatttgtt 905  Q
    |||||||||||||||||   |||||||||||||||||||||| || ||||| ||||| ||||||| || ||||||||||||||||||||| |||||||||    
T  41076267 aatagatatatacaaacgg-tgacacaacatgataggaatgagaagctcatcagtgaagagaaat-attagggattgctgcattttagagagaatttgtt 41076364  T
Q  906 -gggtaaattgctgctaacctaatgcagcattttagagggaaatta 950  Q
     || ||||||| || |||||||||||||||||||||||| ||||||    
T  41076365 aggttaaattgttgttaacctaatgcagcattttagaggaaaatta 41076410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 11 - 142
Target Start/End: Original strand, 33710817 - 33710948
Alignment:
Q  11 cacaaaacactcgcgcccttcagtgttgtcgaaaatatccctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtg 110  Q
    ||||||||||||||||| | |||||||| | |||||| ||||||||||||||||||| |||||||||||||||||  || ||| ||||||||||||||||    
T  33710817 cacaaaacactcgcgccatgcagtgttgccaaaaatacccctgcgctagttaactaacgcaagtgtaaaaaatacgtgagttaatttttacacatgcgtg 33710916  T
Q  111 acttaagtcacgccacgcgagttaactcacgc 142  Q
    |||||||||||||  || ||||||||||||||    
T  33710917 acttaagtcacgctgcgtgagttaactcacgc 33710948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 726 - 903
Target Start/End: Complemental strand, 11131554 - 11131368
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgtacaacaacttgccaaaagaa--gtc---------aatagatat 814  Q
    ||||||||||| |||| ||||||| ||||| ||||| |||| ||||||||||||||||||| ||||||  |||| ||  |||         |||| ||||    
T  11131554 tagccgagtttgcatgaaaattagggtattttgtttgtaaacgtattaaataagtgtacaataacttgtaaaaaaaaaagtctacataaacaataaatat 11131455  T
Q  815 atacaaaccaatgacacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctgcattttagagggaatttg 903  Q
    |||||||| | |||||||||||||||||||||||||||| || ||||||||||||| || |||||||||||||||||||||||||||||    
T  11131454 atacaaacga-tgacacaacatgataggaatgaaaaacttattagtgaggagaaat-attagggattgctgcattttagagggaatttg 11131368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 726 - 905
Target Start/End: Original strand, 15256359 - 15256542
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgtacaacaacttgccaa-aagaagt---------caatagatata 815  Q
    ||||||||||| |||||||||||| ||||||||||| |||| ||||||||||||||||||| |||||| ||| || ||||         |||||||||||    
T  15256359 tagccgagtttgcatggaaattagggtattctgtttgtaaacgtattaaataagtgtacaataacttgtcaagaaaaagtctacagaaacaatagatata 15256458  T
Q  816 tacaaaccaatgacacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctgcattttagagggaatttgtt 905  Q
    |||||| | ||||||||    |||||||||||||| ||||| ||||||||||||| || ||| ||||||||||||||||||| |||||||    
T  15256459 tacaaa-cgatgacaca----gataggaatgaaaagctcatcagtgaggagaaat-attaggaattgctgcattttagagggtatttgtt 15256542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 732 - 905
Target Start/End: Original strand, 17930274 - 17930459
Alignment:
Q  732 agtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgtacaacaacttgccaaaagaa-----gtc---------aatagatatata 817  Q
    ||||| |||| ||||||| ||||| ||||| |||| |||||||||||||||||||||||||| ||||| ||     |||         ||||||||||||    
T  17930274 agtttgcatgaaaattagggtattatgtttgtaaacgtattaaataagtgtacaacaacttgtcaaaaaaaaaagagtctacagaaacaatagatatata 17930373  T
Q  818 caaaccaatgacacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctgcattttagagggaatttgtt 905  Q
    ||||| | |||||||| | |||||||||||||| ||||| ||||||||||||| || |||||||||||||||||||||||||||||||    
T  17930374 caaacga-tgacacaataagataggaatgaaaagctcatcagtgaggagaaat-attagggattgctgcattttagagggaatttgtt 17930459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 595 - 749
Target Start/End: Original strand, 27351679 - 27351834
Alignment:
Q  595 gaaggttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaatatgtgattcttttgttgtctgtgtaatttaccaaggttta-tgnnnnnn 693  Q
    |||||||| |||||||| |||||||  |||||||||| ||||||||||||||| |||||||| || |||||||||||||||||| |||||| |           
T  27351679 gaaggttgtaaggtcacatccttccgtttgcaaaaataaaaatatcaaaatatatgattcttctgctgtctgtgtaatttaccacggtttagttttattt 27351778  T
Q  694 nnagagaaacacggtatagggtttgctatatatagccgagtttacatggaaattag 749  Q
      |||||||||||   |||||||| |||||||||||||||||| ||||||||||||    
T  27351779 ttagagaaacacgcattagggtttactatatatagccgagtttgcatggaaattag 27351834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 882 - 987
Target Start/End: Original strand, 15255775 - 15255882
Alignment:
Q  882 gctgcattttagagggaatttgttgggtaaattgctgctaacctaatgcagcattttagagggaaattagta-gttaacttgttgc-gatctaataaaat 979  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||||||| |||||||||||||||||||| || ||||| ||||||| || ||||| ||||    
T  15255775 gctgcattttagatggaatttgtttggtaaattgttgctaacctaatgtagcattttagagggaaattattaggttaagttgttgcagacctaattaaat 15255874  T
Q  980 taataaat 987  Q
    ||||||||    
T  15255875 taataaat 15255882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 570 - 685
Target Start/End: Original strand, 20641145 - 20641260
Alignment:
Q  570 taccagttaagcagtggtatgagaggaaggttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaatatgtgattcttttgttgtctgtgt 669  Q
    |||||||||| ||||||||||||||||| |||| ||||||||||| ||||| |||||||  || |||||||||||||| ||||| || |||||| ||||     
T  20641145 taccagttaaacagtggtatgagaggaaagttgtaaggtcacgtctttccatttgcaaacctctaaatatcaaaatatatgatttttgtgttgtatgtga 20641244  T
Q  670 aatttaccaaggttta 685  Q
    ||||||||| ||||||    
T  20641245 aatttaccacggttta 20641260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 49 - 150
Target Start/End: Original strand, 19004770 - 19004870
Alignment:
Q  49 ccctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgacttaagtcacgccacgcgagttaactcacgcacgtgt 148  Q
    ||||||||||||||||||| |||||||||||  | ||| |||||| |||| ||||||||||||||||||||||||| |  ||||||||||||||| ||||    
T  19004770 ccctgcgctagttaactaacgcaagtgtaaatcaaacatgacttaatttt-acacatgcgtgacttaagtcacgccgcatgagttaactcacgcaggtgt 19004868  T
Q  149 ta 150  Q
    ||    
T  19004869 ta 19004870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 887 - 986
Target Start/End: Complemental strand, 11131345 - 11131243
Alignment:
Q  887 attttagagggaatttgttgggt-aaattgctgctaacctaatgcagcattttagagggaaattagt-agttaacttgttgc-gatctaataaaattaat 983  Q
    |||||||| | |||||||| ||| ||||||||||||||||||||||||||||||||||||||||| | |||||| ||| ||| || ||||||||||||||    
T  11131345 attttagatgaaatttgttaggttaaattgctgctaacctaatgcagcattttagagggaaattattaagttaagttgctgcagacctaataaaattaat 11131246  T
Q  984 aaa 986  Q
    |||    
T  11131245 aaa 11131243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 12896141 - 12896195
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  12896141 gtgataatccatagtagacaaaataaaacacttcataaaatgtatgaaatctgaa 12896195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 52 - 150
Target Start/End: Original strand, 42807432 - 42807529
Alignment:
Q  52 tgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttt-tacacatgcgtgacttaagtcacgccacgcgagttaactcacgcacgtgtta 150  Q
    |||| ||||||||||| ||||||||||||||  || ||||||||||| ||||||| |||||||||||||||||| |  ||||||||||||||| ||||||    
T  42807432 tgcgttagttaactaacgcaagtgtaaaaaa--catgacttagttttttacacatacgtgacttaagtcacgccgcatgagttaactcacgcaagtgtta 42807529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 289 - 344
Target Start/End: Complemental strand, 11131727 - 11131672
Alignment:
Q  289 ggtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  11131727 ggtgataatccatagtagacacaataaaacactttataaaatgtataaaatctgaa 11131672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 627972 - 627918
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  627972 gtgataatccatagcagacaaaataaaacacttcataaaatgtatgaaatctgaa 627918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 6348462 - 6348408
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  6348462 gtgataatccatagtagacaaaataaaacacttcataaaatgtatgaaatttgaa 6348408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 884 - 987
Target Start/End: Original strand, 17930477 - 17930583
Alignment:
Q  884 tgcattttagagggaatttgttgggt-aaattgctgctaacctaatgcagcattttagagggaaattagta-gttaacttgttgc-gatctaataaaatt 980  Q
    ||||||||||| |||||||||| ||| |||||||||| |||||||| |||||||||| |||| ||||| || ||||| ||||||| || |||||||||||    
T  17930477 tgcattttagatggaatttgttaggttaaattgctgcaaacctaattcagcattttaaaggggaattattaggttaagttgttgcagacctaataaaatt 17930576  T
Q  981 aataaat 987  Q
    |||||||    
T  17930577 aataaat 17930583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 27351609 - 27351663
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  27351609 gtgataatccatagtaggcaaaataaaatacttcataaaatgtataaaatctgaa 27351663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 42 - 123
Target Start/End: Original strand, 42882506 - 42882585
Alignment:
Q  42 aaaatatccctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgacttaagtcacgc 123  Q
    |||||| |||| |||||||||||||| ||||||||||||||     ||||||||||||||||||||||||||||||||||||    
T  42882506 aaaatacccctacgctagttaactaacgcaagtgtaaaaaaatt--gacttagtttttacacatgcgtgacttaagtcacgc 42882585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 44257038 - 44256984
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  44257038 gtgataatccattgtagacaaaataaaacacttcataaaatgtatgaaatctgaa 44256984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 291 - 344
Target Start/End: Original strand, 30556940 - 30556993
Alignment:
Q  291 tgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  30556940 tgataatccataatagacaaaataaaatacttcataaaatgtataaaatctgaa 30556993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 884 - 950
Target Start/End: Original strand, 15256560 - 15256627
Alignment:
Q  884 tgcattttagagggaatttgttgggt-aaattgctgctaacctaatgcagcattttagagggaaatta 950  Q
    ||||||||||| |||||||||| ||| |||||| ||||||||||||||| ||||||||||||||||||    
T  15256560 tgcattttagatggaatttgttaggttaaattgttgctaacctaatgcaacattttagagggaaatta 15256627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 19640508 - 19640454
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||| |||||| ||||||||||||||||||||||||||||| |||||||||    
T  19640508 gtgataatacatagttgacaaaataaaacacttcataaaatgtatgaaatctgaa 19640454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 19839101 - 19839047
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||| |||||| ||||||||||||||||||||||||||||| |||||||||    
T  19839101 gtgataatacatagttgacaaaataaaacacttcataaaatgtatgaaatctgaa 19839047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 20639906 - 20639960
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||||||  ||||||||||||||||||||||||| |||||||||    
T  20639906 gtgataatccatagtagatgaaataaaacacttcataaaatgtatgaaatctgaa 20639960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 731 - 793
Target Start/End: Complemental strand, 24129642 - 24129580
Alignment:
Q  731 gagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgtacaacaacttg 793  Q
    |||||| |||||||||||| ||||||||||| ||||  |||||||||||||||||||||||||    
T  24129642 gagtttgcatggaaattagagtattctgtttgtaaacatattaaataagtgtacaacaacttg 24129580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 745 - 799
Target Start/End: Original strand, 27351856 - 27351910
Alignment:
Q  745 attagtgtattctgtttttaaatgtattaaataagtgtacaacaacttgccaaaa 799  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  27351856 attagggtattctgtttgtaaatgtattaaataagtgtacaacaacttgtcaaaa 27351910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 830 - 900
Target Start/End: Original strand, 27351955 - 27352024
Alignment:
Q  830 acaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctgcattttagagggaat 900  Q
    ||||||||||||||||||||| ||||| ||||||||||||| || || ||||||| |||||||||||||||    
T  27351955 acaacatgataggaatgaaaagctcatcagtgaggagaaat-attagagattgctacattttagagggaat 27352024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 44543461 - 44543515
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||    
T  44543461 gtgataatctatagtagtcaaaataaaacacttcataaaatgtatgaaatctgaa 44543515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 726 - 783
Target Start/End: Complemental strand, 11658066 - 11658009
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| |||||||||||| ||||||||||| |||| ||||||||||||||||    
T  11658066 tagccgagtttgcatggaaattagagtattctgtttgtaaacgtattaaataagtgta 11658009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 730 - 799
Target Start/End: Original strand, 15253508 - 15253577
Alignment:
Q  730 cgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgtacaacaacttgccaaaa 799  Q
    ||||||| |||||||||||  ||||||| ||| |||| |||||||||||||||||||||||||| |||||    
T  15253508 cgagtttgcatggaaattaaggtattctatttgtaaacgtattaaataagtgtacaacaacttgtcaaaa 15253577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 696 - 749
Target Start/End: Original strand, 15256303 - 15256356
Alignment:
Q  696 agagaaacacggtatagggtttgctatatatagccgagtttacatggaaattag 749  Q
    ||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||    
T  15256303 agagaaacacggtttagggtttgctatatatagccaagtttgcatggaaattag 15256356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 805 - 893
Target Start/End: Original strand, 15783019 - 15783108
Alignment:
Q  805 caatagatatatacaaaccaatgacacaacatgataggaatgaaaaa---ctcatgagtgaggagaaataataagggattgctgcattttag 893  Q
    |||||||||||||||||  ||||||| |||| |||||||||||||||   ||||| |||||||||||||| ||| |||||||||||||||||    
T  15783019 caatagatatatacaaat-aatgacaaaacaggataggaatgaaaaaaagctcatcagtgaggagaaatattaa-ggattgctgcattttag 15783108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 28611567 - 28611606
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaac 262  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  28611567 ttgacatacaaataataaaatgcaatatataattggtaac 28611606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 123
Target Start/End: Complemental strand, 42808689 - 42808607
Alignment:
Q  41 gaaaatatccctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagttt-ttacacatgcgtgacttaagtcacgc 123  Q
    |||||||  |||||| ||||||||||| |||||||||||||| |   |||||||||| ||||||||||||||||||||||||||    
T  42808689 gaaaatactcctgcgttagttaactaacgcaagtgtaaaaaa-atgtgacttagtttcttacacatgcgtgacttaagtcacgc 42808607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 833325 - 833367
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  833325 ttgacatacgaataataaaatgcaatatataattggtaacggt 833367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 8430608 - 8430650
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  8430608 ttgacatacgaataataaaatgcaatatataattggtaacggt 8430650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 11658284 - 11658242
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  11658284 ttgacatacgaataataaaatgcaatatataattggtaacggt 11658242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 12898624 - 12898570
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||| |||| |||||||||||||||||||||| ||| |||||||||    
T  12898624 gtgataatccataatagaaaaaataaaacacttcataaaatctatgaaatctgaa 12898570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 27351552 - 27351594
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  27351552 ttgacatacgaataataaaatgcaatatataattggtaacggt 27351594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 37130804 - 37130846
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  37130804 ttgacatacgaataataaaatgcaatatataattggtaacggt 37130846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 828 - 902
Target Start/End: Original strand, 38857712 - 38857785
Alignment:
Q  828 acacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctgcattttagagggaattt 902  Q
    ||||||||||||||||||||||| ||||| | ||||||||||| || |||||||| ||||||||| || ||||||    
T  38857712 acacaacatgataggaatgaaaatctcattattgaggagaaat-attagggattgttgcattttaaagagaattt 38857785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 42 - 143
Target Start/End: Complemental strand, 6402457 - 6402357
Alignment:
Q  42 aaaatatccctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgacttaagtcacgccacgcgagttaactcacg 141  Q
    ||||||||||| |||||||||||||| | |||||||||||  |  | ||||||||||||||||| ||  |||||||||||||  |  |||||||||||||    
T  6402457 aaaatatccctacgctagttaactaacgtaagtgtaaaaataagga-acttagtttttacacatacgcaacttaagtcacgctgcatgagttaactcacg 6402359  T
Q  142 ca 143  Q
    ||    
T  6402358 ca 6402357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 726 - 783
Target Start/End: Original strand, 14336084 - 14336141
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| |||||||||||| ||||||||||| |||| |||||||||| |||||    
T  14336084 tagccgagtttgcatggaaattagagtattctgtttgtaaacgtattaaatatgtgta 14336141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 726 - 783
Target Start/End: Original strand, 20641338 - 20641395
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| |||| ||||||| ||||||||||| |||| ||||||||||||||||    
T  20641338 tagccgagtttgcatgaaaattagggtattctgtttgtaaacgtattaaataagtgta 20641395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 909 - 950
Target Start/End: Original strand, 38857826 - 38857867
Alignment:
Q  909 taaattgctgctaacctaatgcagcattttagagggaaatta 950  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  38857826 taaattgctgctaacataatgcagcattttagagggaaatta 38857867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 726 - 783
Target Start/End: Complemental strand, 41326987 - 41326930
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| |||||||||||| ||||||||||| |||| ||||||||||| ||||    
T  41326987 tagccgagtttgcatggaaattagggtattctgtttgtaaacgtattaaataattgta 41326930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 187354 - 187282
Alignment:
Q  8 caacacaaaacactcgcgcccttcagtgttgtcgaaaatatccctgcgctagttaactaaagcaagtgtaaaa 80  Q
    ||||||||||||| |||| ||| ||||||| ||||||||  || |||| ||||||||||| ||||||||||||    
T  187354 caacacaaaacacccgcgtcctgcagtgttatcgaaaatgcccatgcgttagttaactaacgcaagtgtaaaa 187282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 2132017 - 2132056
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaac 262  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  2132017 ttgacatacgaataataaaatgcaatatataattggtaac 2132056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 710 - 749
Target Start/End: Original strand, 15256218 - 15256257
Alignment:
Q  710 tagggtttgctatatatagccgagtttacatggaaattag 749  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  15256218 tagggtttgctatatatagccgagtttgcatggaaattag 15256257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 262
Target Start/End: Complemental strand, 20709640 - 20709601
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaac 262  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  20709640 ttgacatacgaataataaaatgcaatatataattggtaac 20709601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 12896085 - 12896127
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| ||||||||||||||||||||||| |||||||||    
T  12896085 ttgacatacgaataataaaatgcaatatataataggtaacggt 12896127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 29550719 - 29550665
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||| ||||||||  |||||||| ||||||||||||||||| |||||||||    
T  29550719 gtgataattcatagtagctaaaataaatcacttcataaaatgtatgaaatctgaa 29550665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 30556882 - 30556924
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    |||| ||| ||||||||||||||||||||||||||||||||||    
T  30556882 ttgaaatataaataataaaatgcaatatataattggtaacggt 30556924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 41327201 - 41327159
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| ||||||||||||||||||||||||| |||||||    
T  41327201 ttgacatacgaataataaaatgcaatatataattgataacggt 41327159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 44543405 - 44543447
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| ||||||||||||||||||||||| |||||||||    
T  44543405 ttgacatacgaataataaaatgcaatatataataggtaacggt 44543447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 150
Target Start/End: Original strand, 303378 - 303471
Alignment:
Q  57 tagttaactaaagcaagtgtaaaaaatacaagacttagtttt--tacacatgcgtgacttaagtcacgccacgcgagttaactcacgcacgtgtta 150  Q
    ||||||||||| |||| ||||||||||    |||||||||||  |||||||| ||||||||||||||||| |  || |||||||||||| ||||||    
T  303378 tagttaactaacgcaaatgtaaaaaatgt--gacttagttttcttacacatgtgtgacttaagtcacgccgcatgaattaactcacgcaggtgtta 303471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 304446 - 304372
Alignment:
Q  42 aaaatatccctgcgctagttaactaaagcaagtgtaaaaaatacaagacttag-tttttacacatgcgtgacttaag 117  Q
    |||||| ||||| | ||||||||||| |||||||||||||  ||  ||||||| |||||||||||||||||||||||    
T  304446 aaaatacccctgtgttagttaactaatgcaagtgtaaaaa--acgtgacttagttttttacacatgcgtgacttaag 304372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 696 - 749
Target Start/End: Original strand, 17930212 - 17930265
Alignment:
Q  696 agagaaacacggtatagggtttgctatatatagccgagtttacatggaaattag 749  Q
    ||||||||| ||| |||||||| ||||||||| |||||||| ||||||||||||    
T  17930212 agagaaacatggtttagggttttctatatatatccgagtttgcatggaaattag 17930265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 139
Target Start/End: Complemental strand, 19004995 - 19004907
Alignment:
Q  50 cctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgacttaagtcacgccacgcgagttaactca 139  Q
    ||||| |||||||||||| |||||||||||  | ||  ||||||  ||||||||||||||||||||| ||||||| |  |||||||||||    
T  19004995 cctgcactagttaactaacgcaagtgtaaatcaaacttgactta-attttacacatgcgtgacttaaatcacgccgcatgagttaactca 19004907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 180
Target Start/End: Complemental strand, 33710962 - 33710925
Alignment:
Q  143 acgtgttaatttcagcgtgagttaactcccgcagcgtg 180  Q
    |||||||||||||||||||||||||||| |||||||||    
T  33710962 acgtgttaatttcagcgtgagttaactcacgcagcgtg 33710925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 885 - 987
Target Start/End: Original strand, 41076417 - 41076522
Alignment:
Q  885 gcattttagagggaatttgttgggt-aaattgctgctaacctaatgcagcattttagagggaaattagtag-ttaacttgttgc-gatctaataaaatta 981  Q
    |||||||| | |||||||||| ||| |||||| || ||| |||||||| |||||||||| ||||||| ||| |||| ||||||| ||  |||||||||||    
T  41076417 gcattttaaatggaatttgttaggttaaattgttgttaatctaatgcaacattttagagagaaattattaggttaagttgttgcagacttaataaaatta 41076516  T
Q  982 ataaat 987  Q
    ||||||    
T  41076517 ataaat 41076522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 726 - 783
Target Start/End: Original strand, 41995281 - 41995338
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||| ||||| ||||||||||||  |||||||||| |||| ||||||||||||||||    
T  41995281 tagccaagtttgcatggaaattagattattctgtttgtaaacgtattaaataagtgta 41995338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 726 - 783
Target Start/End: Complemental strand, 44256940 - 44256883
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| |||||||||||| ||||||| ||| ||||  |||||||||||||||    
T  44256940 tagccgagtttgcatggaaattagggtattctatttgtaaacatattaaataagtgta 44256883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 14413434 - 14413498
Alignment:
Q  1 cccaacacaacacaaaacactcgcgcccttcagtgttgtcgaaaatatccctgcgctagttaact 65  Q
    |||||||||| |||||||||||||||||| ||| |||| | |||||  ||||||| |||||||||    
T  14413434 cccaacacaaaacaaaacactcgcgccctgcagcgttgcccaaaatgcccctgcgttagttaact 14413498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 696 - 748
Target Start/End: Original strand, 15253448 - 15253500
Alignment:
Q  696 agagaaacacggtatagggtttgctatatatagccgagtttacatggaaatta 748  Q
    ||||||||||||| |||||||||||||| |||| ||||||| ||| |||||||    
T  15253448 agagaaacacggtttagggtttgctatacatagtcgagtttgcatcgaaatta 15253500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 838 - 905
Target Start/End: Original strand, 15253659 - 15253726
Alignment:
Q  838 ataggaatgaaaaactcatgagtgaggagaaataataagggattgctgca-ttttagagggaatttgtt 905  Q
    ||||||||||||| ||||  ||||||||||||| || | ||||||||||| ||||||||||||||||||    
T  15253659 ataggaatgaaaagctcaaaagtgaggagaaat-attatggattgctgcatttttagagggaatttgtt 15253726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 263
Target Start/End: Original strand, 20639824 - 20639864
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacg 263  Q
    |||||| || |||||||||||||||||||||||||||||||    
T  20639824 ttgacaaacgaataataaaatgcaatatataattggtaacg 20639864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 731 - 783
Target Start/End: Complemental strand, 20709418 - 20709366
Alignment:
Q  731 gagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    |||||| |||| ||||||| ||||||||||| |||| ||||||||||||||||    
T  20709418 gagtttgcatgaaaattagggtattctgtttgtaaacgtattaaataagtgta 20709366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 3816282 - 3816333
Alignment:
Q  129 gagttaactcacgcacgtgttaatttcagcgtgagttaactcccgcagcgtg 180  Q
    ||||||||| ||||| ||||||||| || ||||||||||||| |||||||||    
T  3816282 gagttaacttacgcaggtgttaattacaacgtgagttaactcacgcagcgtg 3816333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 262
Target Start/End: Complemental strand, 11736893 - 11736854
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaac 262  Q
    ||||||||| |||||||||||||||||||||| |||||||    
T  11736893 ttgacatacgaataataaaatgcaatatataactggtaac 11736854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 14335872 - 14335911
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaac 262  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  14335872 ttgacatacgaataataaaatgcaatatataattgataac 14335911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 262
Target Start/End: Complemental strand, 17370713 - 17370674
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaac 262  Q
    ||||||||| ||||||||||| ||||||||||||||||||    
T  17370713 ttgacatacgaataataaaatacaatatataattggtaac 17370674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 599 - 674
Target Start/End: Complemental strand, 20709587 - 20709512
Alignment:
Q  599 gttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaatatgtgattcttttgttgtctgtgtaattt 674  Q
    |||| ||||||||||| ||||| |||||||  || |||||||||||||| ||||| || |||||| |||| |||||    
T  20709587 gttgtaaggtcacgtctttccatttgcaaagctctaaatatcaaaatatatgatttttgtgttgtgtgtgaaattt 20709512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 170
Target Start/End: Complemental strand, 30398429 - 30398357
Alignment:
Q  96 ttttacacatgcgtgacttaagtcacgccacgcgagttaactcacgcacgtgttaatttcagcgtgagttaactc 170  Q
    ||||| ||||||||||||||||||||| ||   ||||||||||||||| ||||||  | | ||||||||||||||    
T  30398429 ttttatacatgcgtgacttaagtcacggca--tgagttaactcacgcaggtgttacatcccgcgtgagttaactc 30398357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 141
Target Start/End: Complemental strand, 3816390 - 3816311
Alignment:
Q  60 ttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgacttaagtcacgccacgcgagttaactcacg 141  Q
    |||||||| ||||||||||||||     |||||| |||||||| ||| ||||||||||||||||  || |||||||||||||    
T  3816390 ttaactaacgcaagtgtaaaaaaatt--gacttaatttttacatatgtgtgacttaagtcacgctgcgtgagttaactcacg 3816311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 10128827 - 10128869
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| |||||||||||| ||||||||||||||| ||||    
T  10128827 ttgacatacgaataataaaatgaaatatataattggtagcggt 10128869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 11131784 - 11131742
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    |||||| || ||||||||||||||||||||||||| |||||||    
T  11131784 ttgacaaacgaataataaaatgcaatatataattgataacggt 11131742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 696 - 754
Target Start/End: Complemental strand, 20709478 - 20709421
Alignment:
Q  696 agagaaacacggtatagggtttgctatatatagccgagtttacatggaaattagtgtat 754  Q
    ||||||||||| ||||||| ||| |||||||| || |||||||||||||||||| ||||    
T  20709478 agagaaacacg-tatagggcttggtatatataaccaagtttacatggaaattagggtat 20709421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 170
Target Start/End: Original strand, 24582477 - 24582515
Alignment:
Q  132 ttaactcacgcacgtgttaatttcagcgtgagttaactc 170  Q
    |||||||||||| ||||||||| ||||||||||||||||    
T  24582477 ttaactcacgcaagtgttaattccagcgtgagttaactc 24582515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 167
Target Start/End: Original strand, 24582539 - 24582577
Alignment:
Q  129 gagttaactcacgcacgtgttaatttcagcgtgagttaa 167  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  24582539 gagttaactcacgcaagtgttaattacagcgtgagttaa 24582577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 726 - 783
Target Start/End: Complemental strand, 12898494 - 12898437
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| |||| ||||||| ||||||| ||| |||| ||||||||||| ||||    
T  12898494 tagccgagtttgcatgaaaattagggtattctatttctaaacgtattaaataattgta 12898437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 696 - 749
Target Start/End: Complemental strand, 41327042 - 41326990
Alignment:
Q  696 agagaaacacggtatagggtttgctatatatagccgagtttacatggaaattag 749  Q
    ||||||||||| | ||||| ||| ||||||||||||||||| ||||||||||||    
T  41327042 agagaaacacgtt-tagggcttggtatatatagccgagtttgcatggaaattag 41326990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 207; Significance: 1e-113; HSPs: 90)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 351 - 685
Target Start/End: Complemental strand, 11928911 - 11928578
Alignment:
Q  351 gttttgaacgaaacaaaattctgattaagttcaaaaaacatgacattacacgacacagtctcaatccttagataatagaccaagaaattgcgacaaaact 450  Q
    |||||||| |||||||||||| |||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  11928911 gttttgaatgaaacaaaattcagattaagttcaaaacacatgacataacacgacacagtctgaatccttagataatagaccaagaaattgcgacaaaact 11928812  T
Q  451 aaataggaagatggccaatattggtgtaaacacctcaaactaaaaactaaaaacgcgaaaaggatattccaattctnnnnnnnnntatgcatatcgataa 550  Q
    |||||||||||  ||||| ||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||         |||||||||| ||||    
T  11928811 aaataggaagactgccaagattggtgtaaacatctcaaactaaaaacaaaaaacgcaaaaaggatattccaattct-caaaaaaatatgcatatcaataa 11928713  T
Q  551 aatgcatgttaaattagaataccagttaagcagtggtatgagaggaaggttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaatatgtg 650  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||| |||| | ||||||||   |||||||||||||||||||||||||| ||    
T  11928712 aatgcatgttaaattagaataccagttaagtagcggtatgagaggaaggttgtaaggccgcgtccttctttttgcaaaaatcaaaatatcaaaatatatg 11928613  T
Q  651 attcttttgttgtctgtgtaatttaccaaggttta 685  Q
    |||||| || |||||||||||||||||| ||||||    
T  11928612 attcttctgctgtctgtgtaatttaccacggttta 11928578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 172; E-Value: 7e-92
Query Start/End: Original strand, 346 - 649
Target Start/End: Original strand, 23481973 - 23482275
Alignment:
Q  346 ataaggttttgaacgaaacaaaattctgattaagttcaaaaaacatgacattacacgacacagtctcaatccttagataatagaccaagaaattgcgaca 445  Q
    |||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  23481973 ataaggttttgaacgaaagaaaattcagattaagttcaaaaaatatgacattacacgacacagtctgaatccttagataatagaccatgaaattgcgaca 23482072  T
Q  446 aaactaaataggaagatggccaatattggtgtaaacacctcaaactaaaaactaaaaacgcgaaaaggatattccaattctnnnnnnnnntatgcatatc 545  Q
    ||| ||||||||||||  ||||  ||| ||||||||| |||||||||||| | ||||| || |||||||||||||||||||         ||||||| |     
T  23482073 aaattaaataggaagactgccagaattagtgtaaacatctcaaactaaaagcaaaaaaagcaaaaaggatattccaattct-caaaaaaatatgcatgtt 23482171  T
Q  546 gataaaatgcatgttaaattagaataccagttaagcagtggtatgagaggaaggttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaat 645  Q
    ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||| |||||||||| |||||||||||||    
T  23482172 gatgaaatgcatgttaaattagaataccaggtaagcagtggtatgagaggaaggttgtaaggttacgtcattccatttgcaaaaataaaaatatcaaaat 23482271  T
Q  646 atgt 649  Q
    ||||    
T  23482272 atgt 23482275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 696 - 903
Target Start/End: Complemental strand, 41461194 - 41460979
Alignment:
Q  696 agagaaacacggtatagggtttgctatatatagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgtacaacaacttg-c 794  Q
    ||||||||| ||| ||||||||||||||||||||| |||||  ||| ||||||| ||||||||||| |||| |||||||||||||||||||||||||| |    
T  41461194 agagaaacatggtttagggtttgctatatatagcccagtttggatgaaaattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtc 41461095  T
Q  795 caaaagaagt---------caatagatatatacaaaccaatgacacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctg 885  Q
     |||| ||||         ||||| ||||||||||| | |||||||||||| ||| ||||||||| ||||| ||||||||||||| || |||||||||||    
T  41461094 aaaaaaaagtctagagaaacaataaatatatacaaa-cgatgacacaacataatatgaatgaaaagctcatcagtgaggagaaat-attagggattgctg 41460997  T
Q  886 cattttagagggaatttg 903  Q
    ||||||||||||||||||    
T  41460996 cattttagagggaatttg 41460979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 8 - 123
Target Start/End: Complemental strand, 42294634 - 42294519
Alignment:
Q  8 caacacaaaacactcgcgcccttcagtgttgtcgaaaatatccctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgc 107  Q
    |||||||||||||||||||||| |||||||| |||||||| || |||| ||||||| ||  |||||||||||||||||| |||||||||||||||||||     
T  42294634 caacacaaaacactcgcgccctgcagtgttgccgaaaatacccttgcgttagttaattagcgcaagtgtaaaaaatacatgacttagtttttacacatgt 42294535  T
Q  108 gtgacttaagtcacgc 123  Q
    ||||||||||||||||    
T  42294534 gtgacttaagtcacgc 42294519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 9e-33
Query Start/End: Original strand, 738 - 905
Target Start/End: Original strand, 23482453 - 23482629
Alignment:
Q  738 catggaaattagtgtattctgtttttaaatgtattaaataagtgtacaacaacttgccaaaagaagt-----------caatagatatatacaaaccaat 826  Q
    |||||||||||| ||||||||||| |||| |||||||||||||||||||||||||| ||||| || |           ||||||||| |||||||| | |    
T  23482453 catggaaattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtcaaaaaaaatgtctacagaaacaatagataaatacaaacga-t 23482551  T
Q  827 gacacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctgcattttagagggaatttgtt 905  Q
    ||||| |||||||||||||||||||||||| ||||||||||||| || || ||||||||||||||||||| ||||||||    
T  23482552 gacacgacatgataggaatgaaaaactcatcagtgaggagaaat-attagagattgctgcattttagaggaaatttgtt 23482629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 730 - 905
Target Start/End: Complemental strand, 46533216 - 46533041
Alignment:
Q  730 cgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgtacaacaacttg-ccaaaagaagtc-aatagatatatacaaaccaatg 827  Q
    ||||||| |||| ||||||| ||||||||||| |||| ||||||||||||||||||||||||||   |||| || || |||||||||||||||| | |||    
T  46533216 cgagtttgcatgaaaattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtaaaaaaaaaatctaatagatatatacaaa-cgatg 46533118  T
Q  828 acacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctgcattttagagggaatttgtt 905  Q
    |||||| |||||||||||||||| ||||| |||| |||||||| || | ||||||  |||||||||||  ||||||||    
T  46533117 acacaatatgataggaatgaaaagctcatcagtgtggagaaat-attatggattgtagcattttagagataatttgtt 46533041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 738 - 903
Target Start/End: Complemental strand, 41462821 - 41462642
Alignment:
Q  738 catggaaattagtgtattctgtttttaaatgtattaaataagtgtacaacaacttgccaaaagaa-------gtc---------aatagatatatacaaa 821  Q
    |||||||||||| ||||| ||||| |||| |||||||||||||||||||||||||| ||||| ||       |||         ||||||||||||||||    
T  41462821 catggaaattagggtattttgtttgtaaacgtattaaataagtgtacaacaacttgtcaaaaaaaaaaaaaagtctagagaaacaatagatatatacaaa 41462722  T
Q  822 ccaatgacacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctgcattttagagggaatttg 903  Q
    | | ||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||| ||||||||||||| ||||    
T  41462721 cga-tgacacaacatgataggaatgaaaaactcatcagtgaggagaaat-attagggattgctacattttagagggagtttg 41462642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 811 - 905
Target Start/End: Complemental strand, 11928414 - 11928322
Alignment:
Q  811 atatatacaaaccaatgacacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctgcattttagagggaatttgtt 905  Q
    |||||||||||| | |||||||||| |||||||||||||| ||||| ||||||||||||| || ||||||||||||||||||||||||| |||||    
T  11928414 atatatacaaacga-tgacacaacaagataggaatgaaaagctcattagtgaggagaaat-attagggattgctgcattttagagggaaattgtt 11928322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 44099323 - 44099377
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44099323 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 44099377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 570 - 678
Target Start/End: Complemental strand, 38684813 - 38684705
Alignment:
Q  570 taccagttaagcagtggtatgagaggaaggttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaatatgtgattcttttgttgtctgtgt 669  Q
    |||||||||||||||| ||||||||||| |||| ||||||||||| ||||| |||||||  || |||||||||||||| | |||||| ||| || ||||     
T  38684813 taccagttaagcagtgctatgagaggaaagttgtaaggtcacgtctttccatttgcaaacctctaaatatcaaaatatataattcttgtgtcgtgtgtga 38684714  T
Q  670 aatttacca 678  Q
    |||||||||    
T  38684713 aatttacca 38684705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 28949606 - 28949660
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28949606 gtgataatccatagtagacaaaataaaacacttcataaaatgtatgaaatctgaa 28949660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 51114296 - 51114242
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  51114296 gtgataatccatagtagacaaaataaaacacttcataaaatgtatgaaatctgaa 51114242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 50 - 142
Target Start/End: Original strand, 11434710 - 11434801
Alignment:
Q  50 cctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgacttaagtcacgccacgcgagttaactcacgc 142  Q
    |||||||||||||||||| |||||||||||||| |   |||||||||||||||||||| ||||||||||||| |  || ||||||||||||||    
T  11434710 cctgcgctagttaactaacgcaagtgtaaaaaaaatt-gacttagtttttacacatgcctgacttaagtcacactgcgtgagttaactcacgc 11434801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 730 - 793
Target Start/End: Complemental strand, 11928533 - 11928470
Alignment:
Q  730 cgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgtacaacaacttg 793  Q
    ||||||| |||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||    
T  11928533 cgagttttcatggaaattagggtattctgtttgtaaaagtattaaataagtgtacaacaacttg 11928470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 289 - 344
Target Start/End: Original strand, 23480758 - 23480813
Alignment:
Q  289 ggtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  23480758 ggtgataatatatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 23480813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 27296711 - 27296657
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  27296711 gtgataattcatagtagacaaaataaaacacttcataaaatgtatgaaatctgaa 27296657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 38685735 - 38685681
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  38685735 gtgataatctatagtagacaaaataaaacacttcataaaatgtatgaaatctgaa 38685681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 289 - 333
Target Start/End: Complemental strand, 21882765 - 21882721
Alignment:
Q  289 ggtgataatccatagtagacaaaataaaacacttcataaaatgta 333  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  21882765 ggtgataatccatagtagacaaaataaaacacttcataaaatgta 21882721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 11435333 - 11435266
Alignment:
Q  54 cgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgacttaagtcac 121  Q
    |||||||||||||| ||||||||||||||||   |||||||||||||||||||  |||||||||||||    
T  11435333 cgctagttaactaacgcaagtgtaaaaaataagggacttagtttttacacatggatgacttaagtcac 11435266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 318998 - 318944
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||| ||||||||| |||||||||||||||||||||||||| |||||||||    
T  318998 gtgataattcatagtagataaaataaaacacttcataaaatgtatgaaatctgaa 318944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 290 - 340
Target Start/End: Complemental strand, 5429643 - 5429593
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatc 340  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  5429643 gtgataatctatagtagacaaaataaaacacttcataaaatgtatgaaatc 5429593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 21618733 - 21618691
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  21618733 ttgacatacaaataataaaatgcaatatataattggtaacggt 21618691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 21618853 - 21618811
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  21618853 ttgacatacaaataataaaatgcaatatataattggtaacggt 21618811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 89 - 143
Target Start/End: Complemental strand, 37920200 - 37920146
Alignment:
Q  89 acttagtttttacacatgcgtgacttaagtcacgccacgcgagttaactcacgca 143  Q
    |||||||||||||||||||||||||||| |||||| ||| |||||||||||||||    
T  37920200 acttagtttttacacatgcgtgacttaaatcacgcaacgtgagttaactcacgca 37920146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 290 - 340
Target Start/End: Original strand, 42491693 - 42491743
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatc 340  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  42491693 gtgataatccatagtagacaaaataaaacatttcataaaatgtatgaaatc 42491743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 586 - 639
Target Start/End: Original strand, 23482274 - 23482327
Alignment:
Q  586 gtatgagaggaaggttgcaaggtcacgtccttccaattgcaaaaatcaaaatat 639  Q
    |||||| |||||||||| ||||||||||| ||||||||||||||||||||||||    
T  23482274 gtatgaaaggaaggttgtaaggtcacgtcattccaattgcaaaaatcaaaatat 23482327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 300 - 344
Target Start/End: Complemental strand, 24595592 - 24595548
Alignment:
Q  300 atagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  24595592 atagtagacaaaataaaacacttcataaaatgtatgaaatctgaa 24595548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 123
Target Start/End: Complemental strand, 32713762 - 32713651
Alignment:
Q  11 cacaaaacactcgcgcccttcagtgttgtcgaaaatatccctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtg 110  Q
    |||||||||||||||  || |  |||||||||||||   |||||| ||| ||||||| | |||||||||||| |   |||||||||||||||||||||||    
T  32713762 cacaaaacactcgcgttctgcgatgttgtcgaaaatgctcctgcgttagataactaacgtaagtgtaaaaaaaatt-gacttagtttttacacatgcgtg 32713664  T
Q  111 acttaagtcacgc 123  Q
    || ||||||||||    
T  32713663 acgtaagtcacgc 32713651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 909 - 987
Target Start/End: Complemental strand, 49484018 - 49483938
Alignment:
Q  909 taaattgctgctaacctaatgcagcattttagagggaaattagt-agttaacttgttgc-gatctaataaaattaataaat 987  Q
    |||||||||||||||||||||||||| ||||||| ||||||| | |||||| ||| ||| || ||||||||||||||||||    
T  49484018 taaattgctgctaacctaatgcagcactttagagagaaattattaagttaagttgctgcagacctaataaaattaataaat 49483938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 825 - 905
Target Start/End: Complemental strand, 49484141 - 49484062
Alignment:
Q  825 atgacacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctgcattttagagggaatttgtt 905  Q
    ||||||||||||||||| |||||||| || || ||||||||||||| || |||||||| ||||| |||||| |||||||||    
T  49484141 atgacacaacatgatagaaatgaaaagcttatcagtgaggagaaat-attagggattgttgcatgttagagagaatttgtt 49484062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 32713285 - 32713234
Alignment:
Q  129 gagttaactcacgcacgtgttaatttcagcgtgagttaactcccgcagcgtg 180  Q
    ||||||||||||||| |||||||||| ||||||||||||||| |||||||||    
T  32713285 gagttaactcacgcaagtgttaattttagcgtgagttaactcacgcagcgtg 32713234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 698 - 749
Target Start/End: Complemental strand, 41462887 - 41462836
Alignment:
Q  698 agaaacacggtatagggtttgctatatatagccgagtttacatggaaattag 749  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||    
T  41462887 agaaacacggtttagggtttgctatatatagctgagtttgcatggaaattag 41462836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 1155774 - 1155828
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||| ||| ||||| |||||||||||||||||||||||||| |||||||||    
T  1155774 gtgataattcattgtagataaaataaaacacttcataaaatgtatgaaatctgaa 1155828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 261
Target Start/End: Complemental strand, 21882821 - 21882783
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaa 261  Q
    |||||||||||||||||||||||||||||||||||||||    
T  21882821 ttgacatacaaataataaaatgcaatatataattggtaa 21882783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 25931377 - 25931419
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  25931377 ttgacatacgaataataaaatgcaatatataattggtaacggt 25931419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 881 - 950
Target Start/End: Complemental strand, 41462625 - 41462555
Alignment:
Q  881 tgctgcattttagagggaatttgttgggt-aaattgctgctaacctaatgcagcattttagagggaaatta 950  Q
    |||||| ||||||| | |||||||| ||| |||||||||||||||||||||| ||||||||||| ||||||    
T  41462625 tgctgccttttagatgaaatttgttaggttaaattgctgctaacctaatgcaacattttagaggaaaatta 41462555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 725 - 783
Target Start/End: Original strand, 42491824 - 42491882
Alignment:
Q  725 atagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    |||| ||||||| |||||||||||| ||||||||||| |||| ||||||||||||||||    
T  42491824 atagtcgagtttgcatggaaattagggtattctgtttgtaaacgtattaaataagtgta 42491882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 48411682 - 48411736
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||||||||||| ||||||||||||| |||||||||||||| |||| ||||    
T  48411682 gtgataatccatagtaaacaaaataaaacatttcataaaatgtatgaaatttgaa 48411736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 726 - 783
Target Start/End: Complemental strand, 12115901 - 12115844
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| |||||||||||| ||||| ||||| |||| ||||||||||||||||    
T  12115901 tagccgagtttgcatggaaattagggtattttgtttgtaaacgtattaaataagtgta 12115844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 882 - 950
Target Start/End: Complemental strand, 41460961 - 41460892
Alignment:
Q  882 gctgcattttagagggaatttgttgggtaa-attgctgctaacctaatgcagcattttagagggaaatta 950  Q
    ||||||||||||| |||||||||| ||| | || ||||||||||||||||||||||| ||||| ||||||    
T  41460961 gctgcattttagacggaatttgttaggttacatcgctgctaacctaatgcagcatttcagaggaaaatta 41460892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 726 - 783
Target Start/End: Original strand, 45417110 - 45417167
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| |||| ||||||| ||||||||||| |||| ||||||||||||||||    
T  45417110 tagccgagtttgcatgcaaattagggtattctgtttgtaaacgtattaaataagtgta 45417167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 696 - 749
Target Start/End: Complemental strand, 46533276 - 46533223
Alignment:
Q  696 agagaaacacggtatagggtttgctatatatagccgagtttacatggaaattag 749  Q
    |||||| |||||| ||| ||||||||||||||||||||||| ||||||||||||    
T  46533276 agagaagcacggtttagagtttgctatatatagccgagtttgcatggaaattag 46533223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 696 - 749
Target Start/End: Complemental strand, 46533380 - 46533327
Alignment:
Q  696 agagaaacacggtatagggtttgctatatatagccgagtttacatggaaattag 749  Q
    ||||||||||||| |||||||| |||||||||||||||||| | ||||||||||    
T  46533380 agagaaacacggtttagggttttctatatatagccgagtttgcgtggaaattag 46533327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 726 - 779
Target Start/End: Original strand, 52407732 - 52407785
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataag 779  Q
    ||||||||||| |||||||||||| ||||||||||| |||| ||||||||||||    
T  52407732 tagccgagtttgcatggaaattagggtattctgtttataaacgtattaaataag 52407785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 726 - 778
Target Start/End: Complemental strand, 18912952 - 18912900
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataa 778  Q
    ||||||||||| |||||||||||| ||||||||||| |||| |||||||||||    
T  18912952 tagccgagtttgcatggaaattagggtattctgtttgtaaacgtattaaataa 18912900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 731 - 783
Target Start/End: Complemental strand, 21618514 - 21618462
Alignment:
Q  731 gagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    |||||| |||||||||||| ||||||||||| |||| ||||||||||||||||    
T  21618514 gagtttgcatggaaattagggtattctgtttgtaaacgtattaaataagtgta 21618462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 120
Target Start/End: Original strand, 37919674 - 37919742
Alignment:
Q  52 tgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgacttaagtca 120  Q
    |||||||||||||||| | | ||||||||   |||  ||||||||||||||||||||||||||||||||    
T  37919674 tgcgctagttaactaacgtatgtgtaaaattaacataacttagtttttacacatgcgtgacttaagtca 37919742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 265
Target Start/End: Complemental strand, 44264569 - 44264525
Alignment:
Q  221 atttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    |||| |||||| |||||||||||||||||||||||||||||||||    
T  44264569 atttaacatacgaataataaaatgcaatatataattggtaacggt 44264525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 726 - 781
Target Start/End: Complemental strand, 1648096 - 1648041
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtg 781  Q
    ||||||||||| |||||||||||| ||||| ||||| |||| ||||||||||||||    
T  1648096 tagccgagtttgcatggaaattagggtattttgtttgtaaacgtattaaataagtg 1648041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 599 - 674
Target Start/End: Original strand, 4099989 - 4100064
Alignment:
Q  599 gttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaatatgtgattcttttgttgtctgtgtaattt 674  Q
    |||| ||||||||||| ||||| |||||||| || |||||||||||||| ||||| || |||||| |||| |||||    
T  4099989 gttgtaaggtcacgtctttccatttgcaaaactctaaatatcaaaatatatgatttttgtgttgtgtgtgaaattt 4100064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 262
Target Start/End: Complemental strand, 39282445 - 39282406
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaac 262  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  39282445 ttgacatacgaataataaaatgcaatatataattggtaac 39282406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 4099935 - 4099977
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| ||||||||||| |||||||||||||||||||||    
T  4099935 ttgacatacgaataataaaattcaatatataattggtaacggt 4099977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 6537150 - 6537192
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| ||||||||||||||||||||||||| |||||||    
T  6537150 ttgacatacgaataataaaatgcaatatataattgataacggt 6537192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 12116118 - 12116076
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| ||||||||||||||||||||||| |||||||||    
T  12116118 ttgacatacgaataataaaatgcaatatataataggtaacggt 12116076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 16165233 - 16165275
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| |||||| ||||||||||||||||||||||||||    
T  16165233 ttgacatacgaataatgaaatgcaatatataattggtaacggt 16165275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 599 - 685
Target Start/End: Original strand, 16165287 - 16165373
Alignment:
Q  599 gttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaatatgtgattcttttgttgtctgtgtaatttaccaaggttta 685  Q
    |||| ||||||||||| || || |||||||| || ||||||||||||||  |||| || |||||| |||| ||||||||| ||||||    
T  16165287 gttgtaaggtcacgtcttttcatttgcaaaactctaaatatcaaaatataagatttttgtgttgtgtgtgaaatttaccacggttta 16165373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 23480702 - 23480744
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| ||||||||||| |||||||||||||||||||||    
T  23480702 ttgacatacgaataataaaatacaatatataattggtaacggt 23480744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 27296767 - 27296725
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| ||||||||||||||||||||||| |||||||||    
T  27296767 ttgacatacgaataataaaatgcaatatataataggtaacggt 27296725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 28949550 - 28949592
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| ||||||||||||||||||||||| |||||||||    
T  28949550 ttgacatacgaataataaaatgcaatatataataggtaacggt 28949592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 167
Target Start/End: Complemental strand, 32306451 - 32306413
Alignment:
Q  129 gagttaactcacgcacgtgttaatttcagcgtgagttaa 167  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  32306451 gagttaactcacgcaagtgttaatttcagcgtgagttaa 32306413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 44099268 - 44099310
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| ||||||||||||||||||||||| |||||||||    
T  44099268 ttgacatacgaataataaaatgcaatatataataggtaacggt 44099310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 52690244 - 52690190
Alignment:
Q  96 ttttacacatgcgtgacttaagtcacgccacgcgagttaactcacgcacgtgtta 150  Q
    ||||||||||| ||||||||||||||| |||  ||||||||||||||| ||||||    
T  52690244 ttttacacatgtgtgacttaagtcacgtcacatgagttaactcacgcaggtgtta 52690190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 726 - 783
Target Start/End: Original strand, 16165451 - 16165508
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||| ||| ||||||||||||  |||||||||| |||| ||||||||||||||||    
T  16165451 tagccgaatttgcatggaaattaggatattctgtttgtaaacgtattaaataagtgta 16165508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 19062895 - 19062936
Alignment:
Q  129 gagttaactcacgcacgtgttaatttcagcgtgagttaactc 170  Q
    ||||||| ||||||| ||||||||||||||||||||||||||    
T  19062895 gagttaattcacgcaagtgttaatttcagcgtgagttaactc 19062936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 142
Target Start/End: Original strand, 32713176 - 32713257
Alignment:
Q  61 taactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgacttaagtcacgccacgcgagttaactcacgc 142  Q
    ||||||| ||||||||||||||     || |||||||| |||||| |||||||||||||||||  || ||||||||||||||    
T  32713176 taactaacgcaagtgtaaaaaaattttgatttagttttaacacatacgtgacttaagtcacgctgcgtgagttaactcacgc 32713257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 726 - 783
Target Start/End: Complemental strand, 44264351 - 44264294
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| |||||||||||  |||||| |||| |||| ||||||||||||||||    
T  44264351 tagccgagtttgcatggaaattatggtattcagtttgtaaacgtattaaataagtgta 44264294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 21258322 - 21258362
Alignment:
Q  129 gagttaactcacgcacgtgttaatttcagcgtgagttaact 169  Q
    ||||||||||||||| ||||||||| |||||||||||||||    
T  21258322 gagttaactcacgcaagtgttaattccagcgtgagttaact 21258362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 265
Target Start/End: Complemental strand, 38685782 - 38685750
Alignment:
Q  233 aataataaaatgcaatatataattggtaacggt 265  Q
    |||||||||||||||||||||||||||||||||    
T  38685782 aataataaaatgcaatatataattggtaacggt 38685750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 45886884 - 45886940
Alignment:
Q  11 cacaaaacactcgcgcccttcagtgttgtcgaaaatatccctgcgctagttaactaa 67  Q
    ||||||||||||||||||| |||   | ||||||||| |||||||||||||||||||    
T  45886884 cacaaaacactcgcgccctgcagacatttcgaaaatacccctgcgctagttaactaa 45886940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 599 - 647
Target Start/End: Original strand, 52407577 - 52407625
Alignment:
Q  599 gttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaatat 647  Q
    |||||||||||||||| ||||| |||||||| || ||||||||||||||    
T  52407577 gttgcaaggtcacgtctttccatttgcaaaactctaaatatcaaaatat 52407625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 881 - 943
Target Start/End: Original strand, 23482640 - 23482703
Alignment:
Q  881 tgctgcattttagagggaatttgttgggt-aaattgctgctaacctaatgcagcattttagagg 943  Q
    ||||||||||||||  |||||| || ||| |||||||||||||| |||||| ||||||||||||    
T  23482640 tgctgcattttagatagaatttattaggttaaattgctgctaacgtaatgctgcattttagagg 23482703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 732 - 783
Target Start/End: Complemental strand, 39282263 - 39282212
Alignment:
Q  732 agtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    |||||||||||||||||  ||||||||||| |||  ||||||||||||||||    
T  39282263 agtttacatggaaattaaggtattctgtttgtaaccgtattaaataagtgta 39282212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 42491637 - 42491676
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaac 262  Q
    ||||||||| ||||||||||||||||||||||| ||||||    
T  42491637 ttgacatacgaataataaaatgcaatatataataggtaac 42491676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 44451709 - 44451748
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaac 262  Q
    |||| |||| ||||||||||||||||||||||||||||||    
T  44451709 ttgatatacgaataataaaatgcaatatataattggtaac 44451748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 599 - 674
Target Start/End: Original strand, 45416951 - 45417026
Alignment:
Q  599 gttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaatatgtgattcttttgttgtctgtgtaattt 674  Q
    |||| ||||||||||| ||||| |||||||| || |||||||||||||| | ||| || |||||| |||| |||||    
T  45416951 gttgtaaggtcacgtctttccatttgcaaaactctaaatatcaaaatatataatttttgtgttgtgtgtgaaattt 45417026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 46190295 - 46190365
Alignment:
Q  8 caacacaaaacactcgcgcccttcagtgttgtcgaaaatatccctgcgctagttaactaaagcaagtgtaaa 79  Q
    ||||||||||||||| | |||| |||||||||| |||||  |||||| ||||||||| || |||||||||||    
T  46190295 caacacaaaacactc-caccctgcagtgttgtcaaaaatgcccctgcactagttaaccaacgcaagtgtaaa 46190365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 262
Target Start/End: Complemental strand, 47791459 - 47791420
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaac 262  Q
    ||||||||  ||||||||||||||||||||||||||||||    
T  47791459 ttgacatatgaataataaaatgcaatatataattggtaac 47791420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 730 - 781
Target Start/End: Original strand, 51271998 - 51272049
Alignment:
Q  730 cgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtg 781  Q
    ||||||| |||||||||||  ||||||||||| |||| ||||||||||||||    
T  51271998 cgagtttgcatggaaattaaggtattctgtttgtaaacgtattaaataagtg 51272049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 261
Target Start/End: Original strand, 1155718 - 1155756
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaa 261  Q
    ||||||||| ||||||||||||||||||||||| |||||    
T  1155718 ttgacatacgaataataaaatgcaatatataataggtaa 1155756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 261
Target Start/End: Complemental strand, 1648305 - 1648271
Alignment:
Q  227 catacaaataataaaatgcaatatataattggtaa 261  Q
    ||||| |||||||||||||||||||||||||||||    
T  1648305 catacgaataataaaatgcaatatataattggtaa 1648271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 3226525 - 3226566
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| ||||||||| |||||||||||||||||||||||    
T  3226525 ttgacatacgaataataaa-tgcaatatataattggtaacggt 3226566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 170
Target Start/End: Complemental strand, 7013298 - 7013260
Alignment:
Q  132 ttaactcacgcacgtgttaatttcagcgtgagttaactc 170  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  7013298 ttaactcacgcatgtgttaatttctgcgtgagttaactc 7013260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 18913161 - 18913119
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    |||| |||| ||||||||||||||||||||||||||| |||||    
T  18913161 ttgatatacgaataataaaatgcaatatataattggtcacggt 18913119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 43625614 - 43625561
Alignment:
Q  96 ttttacacatgcgtgacttaagtcacgccacgcgagttaactcacgcacgtgtta 150  Q
    ||||||||||||| ||||||||||||||| |  ||||||||||||||| ||||||    
T  43625614 ttttacacatgcg-gacttaagtcacgccgcatgagttaactcacgcaagtgtta 43625561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 257
Target Start/End: Complemental strand, 52741067 - 52741033
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattg 257  Q
    ||||||||| |||||||||||||||||||||||||    
T  52741067 ttgacatacgaataataaaatgcaatatataattg 52741033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 710 - 783
Target Start/End: Original strand, 4100107 - 4100180
Alignment:
Q  710 tagggtttgctatatatagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||| ||| |||||||| || |||||||||| ||||| | ||||||| ||| | || ||||||||||||||||    
T  4100107 tagggcttggtatatataaccaagtttacatgaaaatttgggtattctatttgttaacgtattaaataagtgta 4100180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 6086772 - 6086711
Alignment:
Q  11 cacaaaacactcgcgcccttcagtgttgtcgaaaatatccctgcgctagttaactaaagcaa 72  Q
    ||||||||||||||||||| |||| |||||||||||  || |||| ||||||| ||| ||||    
T  6086772 cacaaaacactcgcgccctgcagttttgtcgaaaatgcccatgcgttagttaagtaatgcaa 6086711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 726 - 775
Target Start/End: Complemental strand, 27892029 - 27891980
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaa 775  Q
    |||||||||||||||| ||||||  ||||||||||| |||| ||||||||    
T  27892029 tagccgagtttacatgaaaattaaggtattctgtttgtaaacgtattaaa 27891980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 121
Target Start/End: Original strand, 44527928 - 44527996
Alignment:
Q  52 tgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgacttaagtcac 121  Q
    |||| ||||||||||| ||| |||||||  | ||| |||||| |||| ||||||||||||||||||||||    
T  44527928 tgcgttagttaactaacgcatgtgtaaatcaaacatgacttaatttt-acacatgcgtgacttaagtcac 44527996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 264
Target Start/End: Original strand, 48411626 - 48411667
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacgg 264  Q
    ||||||||| ||||||||||||||||||||||| | ||||||    
T  48411626 ttgacatacgaataataaaatgcaatatataatagataacgg 48411667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 193; Significance: 1e-104; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 346 - 749
Target Start/End: Original strand, 2969753 - 2970160
Alignment:
Q  346 ataaggttttgaacgaaacaaaattctgattaagttcaaaaaacatgacattacacgacacagtctcaatccttagataatagaccaagaaattgcgaca 445  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| | ||||||| ||||||||||||||||||||||||||| |||||    
T  2969753 ataaggttttgaacgaaacaaaattcagattaagttcaaaaaacataacattacacaatacagtctgaatccttagataatagaccaagaaattacgaca 2969852  T
Q  446 aaactaaataggaagatggccaatattggtgtaaacacctcaaactaaaaactaaaaacgcgaaaaggatattccaattctnnnnnnnnntatgcatatc 545  Q
    | ||||||||||||||  ||||| |||||| ||||||  | || |||||||| |||||||| ||||||||||| |||||||         |||| ||||     
T  2969853 acactaaataggaagagtgccaaaattggtataaaca--ttaatctaaaaacaaaaaacgcaaaaaggatatttcaattctcaaaaaaaatatgtatatt 2969950  T
Q  546 gataaaatgcatgttaaattagaataccagttaagcagtggtatgagaggaaggttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaat 645  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||| ||| ||||||||||||||||||||    
T  2969951 gataaaatgcatgttaaattagaataccagttaagcagtggtttgagaggaaggttgtaaggtcacgttcttccatttgtaaaaatcaaaatatcaaaat 2970050  T
Q  646 atgtgattcttttgttgtctgtgtaatttacca------aggtttatgnnnnnnnnagagaaacacggtatagggtttgctatatatagccgagtttaca 739  Q
    || |||||||| || ||||| ||||||||||||      |||||| |         ||| |||| |||| ||||||||||||||||||||||||||| ||    
T  2970051 atatgattcttctgctgtctatgtaatttaccacggtttaggttttttttttcttgagaaaaactcggtttagggtttgctatatatagccgagtttgca 2970150  T
Q  740 tggaaattag 749  Q
    ||||||||||    
T  2970151 tggaaattag 2970160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 805 - 987
Target Start/End: Complemental strand, 12296116 - 12295933
Alignment:
Q  805 caatagatatatacaaaccaatgacacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctgcattttagagggaatttgt 904  Q
    |||||||||||||||||| | ||||||||||||||||||||||||| ||||| ||||||||||||| || || |||||||||||||||||||||||||||    
T  12296116 caatagatatatacaaacga-tgacacaacatgataggaatgaaaagctcatcagtgaggagaaat-attagagattgctgcattttagagggaatttgt 12296019  T
Q  905 t-gggtaaattgctgctaacctaatgcagcattttagagggaaattagta-gttaacttgttgc-gatctaataaaattaataaat 987  Q
    | || ||||||||| |||||||||||||| ||||||||||||||| | || ||||| ||||||| || ||||||||||||||||||    
T  12296018 taggttaaattgctactaacctaatgcagtattttagagggaaatcattaggttaagttgttgcagacctaataaaattaataaat 12295933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 703 - 903
Target Start/End: Original strand, 24223299 - 24223502
Alignment:
Q  703 cacggtatagggtttgctatatatagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgtacaacaacttgccaaaagaa 802  Q
    |||||| |||||||| |||||||||||||||||     ||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||| ||    
T  24223299 cacggtttagggtttcctatatatagccgagtt-----ggaaattagggtattctgtttgtaaatgtattaaataagtgtacaacaacttgtcaaaaaaa 24223393  T
Q  803 -gtc---------aatagatatatacaaaccaatgacacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctgcatttta 892  Q
     |||         ||||||||||||||||| | ||||||||||||||||||||||||| ||||| ||||||||||||| || ||||||||||||||||||    
T  24223394 agtctagagaaacaatagatatatacaaacga-tgacacaacatgataggaatgaaaagctcatcagtgaggagaaat-attagggattgctgcatttta 24223491  T
Q  893 gagggaatttg 903  Q
    |||||||||||    
T  24223492 gagggaatttg 24223502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 698 - 905
Target Start/End: Original strand, 6601699 - 6601914
Alignment:
Q  698 agaaacacggtatagggtttgctatatatagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgtacaacaacttgccaa 797  Q
    ||||||||||||||||||||| ||||| | ||||||||| ||||||| |||| ||||| ||||  |||||||||||||||||||||||||||||||  ||    
T  6601699 agaaacacggtatagggtttgttatattttgccgagtttgcatggaacttagggtattatgttcgtaaatgtattaaataagtgtacaacaacttgttaa 6601798  T
Q  798 aagaa----------gtcaatagatatatacaaaccaatgacacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctgca 887  Q
    || ||           |||||||||||||||||| | |||||| | || |||||||||||||||||||| |||||| |||||| || || ||||||||||    
T  6601799 aaaaaagtctacattatcaatagatatatacaaa-cgatgacatagcaggataggaatgaaaaactcatcagtgagaagaaat-attagagattgctgca 6601896  T
Q  888 ttttagagggaatttgtt 905  Q
    ||||||||||||||||||    
T  6601897 ttttagagggaatttgtt 6601914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 727 - 903
Target Start/End: Original strand, 24222962 - 24223147
Alignment:
Q  727 agccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgtacaacaacttgccaaaagaa--gtc---------aatagatata 815  Q
    |||||||||| |||| ||||| | ||||| |||||||||| ||||||||||||||||||||||||||  |||| ||  |||         ||||||||||    
T  24222962 agccgagtttgcatgaaaattggggtattatgtttttaaacgtattaaataagtgtacaacaacttgtaaaaaaaaaagtctagagaaacaatagatata 24223061  T
Q  816 tacaaaccaatgacacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctgcattttagagggaatttg 903  Q
    ||||||| | ||||||||||||||||||| ||||| ||||| ||||||||||||| || ||||||||||||||||||||| |||||||    
T  24223062 tacaaacga-tgacacaacatgataggaacgaaaagctcatcagtgaggagaaat-attagggattgctgcattttagagtgaatttg 24223147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 726 - 905
Target Start/End: Original strand, 16799296 - 16799485
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgtacaacaacttgccaaaagaa---gtc---------aatagata 813  Q
    ||||||||||| |||| ||||||| ||||| ||||| |||||||||||||||||||||||||||||||  |||| ||   |||         ||||||||    
T  16799296 tagccgagtttgcatgaaaattagggtattatgtttgtaaatgtattaaataagtgtacaacaacttgtaaaaaaaaaatgtctacagaaacaatagata 16799395  T
Q  814 tatacaaaccaatgacacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctgcattttagagggaatttgtt 905  Q
    ||||||||| | |||||||||| ||||| |||||||| ||||| |||||||||||||| ||| |||||||||||||||| || |||||||||    
T  16799396 tatacaaacga-tgacacaacaggatagaaatgaaaagctcatcagtgaggagaaatattaa-ggattgctgcattttatagtgaatttgtt 16799485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 570 - 675
Target Start/End: Complemental strand, 29202198 - 29202093
Alignment:
Q  570 taccagttaagcagtggtatgagaggaaggttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaatatgtgattcttttgttgtctgtgt 669  Q
    |||||||||||||||||||||| ||||| |||| ||||||||||| ||||| |||||||  || |||||||||||||| |||||||| |||||| ||||     
T  29202198 taccagttaagcagtggtatgaaaggaaagttgtaaggtcacgtctttccatttgcaaacctctaaatatcaaaatatatgattcttgtgttgtgtgtga 29202099  T
Q  670 aattta 675  Q
    ||||||    
T  29202098 aattta 29202093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 825 - 905
Target Start/End: Original strand, 17079905 - 17079984
Alignment:
Q  825 atgacacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctgcattttagagggaatttgtt 905  Q
    ||||||||||| |||||||||||||| ||||| |||||||||||||| ||| |||||||||||||||||||||||||||||    
T  17079905 atgacacaacaggataggaatgaaaagctcatcagtgaggagaaatattaa-ggattgctgcattttagagggaatttgtt 17079984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 805 - 905
Target Start/End: Complemental strand, 17201584 - 17201486
Alignment:
Q  805 caatagatatatacaaaccaatgacacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctgcattttagagggaatttgt 904  Q
    |||||| ||||||||||| | |||||||| | |||||||||||||||||||| ||||| |||||||| || |||||||||||||||||||||||||||||    
T  17201584 caatagttatatacaaacga-tgacacaataggataggaatgaaaaactcatcagtgaagagaaatatta-gggattgctgcattttagagggaatttgt 17201487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 886 - 987
Target Start/End: Original strand, 24223524 - 24223628
Alignment:
Q  886 cattttagagggaatttgttggg-taaattgctgctaacctaatgcagcattttagagggaaattagta-gttaacttgttgc-gatctaataaaattaa 982  Q
    ||||||||| |||||||||| || ||||||||||||||| |||||||||||||||||||||||||| || ||||| ||| ||| || |||||||||||||    
T  24223524 cattttagatggaatttgttaggctaaattgctgctaacttaatgcagcattttagagggaaattattaggttaagttgctgcagacctaataaaattaa 24223623  T
Q  983 taaat 987  Q
    |||||    
T  24223624 taaat 24223628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 886 - 987
Target Start/End: Complemental strand, 17200430 - 17200326
Alignment:
Q  886 cattttagagggaatttgttgggt-aaattgctgctaacctaatgcagcattttagagggaaattagta-gttaacttgttgc-gatctaataaaattaa 982  Q
    ||||||||| |||||||||| ||| ||||||||||||||||| |||||||||||||| |||||||| || ||||| ||| ||| || |||||||||||||    
T  17200430 cattttagatggaatttgttaggttaaattgctgctaacctattgcagcattttagaaggaaattattaggttaagttgctgcagacctaataaaattaa 17200331  T
Q  983 taaat 987  Q
    |||||    
T  17200330 taaat 17200326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 909 - 982
Target Start/End: Complemental strand, 17203737 - 17203662
Alignment:
Q  909 taaattgctgctaacctaatgcagcattttagagggaaattagta-gttaacttgttgc-gatctaataaaattaa 982  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||| || |||||||||||||    
T  17203737 taaattgctgctaacctaatgcagcattttagagggaaattattaggttaagttgttgcagacctaataaaattaa 17203662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 1394348 - 1394294
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  1394348 gtgataatccatagtagataaaataaaacacttcataaaatgtatgaaatctgaa 1394294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 25068581 - 25068527
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  25068581 gtgataatccatagtagacaaaataaaacacttcataaattgtatgaaatctgaa 25068527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 726 - 902
Target Start/End: Original strand, 33482167 - 33482355
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgtacaacaacttgccaaaagaa-----gtc---------aataga 811  Q
    |||||||||||  ||| ||||||| |||||||| || |||| ||||||||||||||||||||||||||  |||| ||     |||         |||| |    
T  33482167 tagccgagtttgaatgaaaattagggtattctggttgtaaacgtattaaataagtgtacaacaacttgtaaaaaaaaaaaaagtcgacataaacaataaa 33482266  T
Q  812 tatatacaaaccaatgacacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctgcattttagagggaattt 902  Q
    ||||||||||| | ||||||||||||||| ||||||||| |||||  |||||||||||| ||  |||||||||||||||||||| ||||||    
T  33482267 tatatacaaacga-tgacacaacatgataagaatgaaaagctcatatgtgaggagaaat-attcgggattgctgcattttagagagaattt 33482355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 42 - 142
Target Start/End: Original strand, 31778784 - 31778883
Alignment:
Q  42 aaaatatccctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgacttaagtcacgccacgcgagttaactcacg 141  Q
    |||||| ||||||||||||||||||| ||| |||||||  | ||  ||||||  ||||||||||||||||||||||||||||| |  |||||||||||||    
T  31778784 aaaatacccctgcgctagttaactaacgcatgtgtaaatcaaacgtgactta-attttacacatgcgtgacttaagtcacgccgcatgagttaactcacg 31778882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 32879774 - 32879723
Alignment:
Q  129 gagttaactcacgcacgtgttaatttcagcgtgagttaactcccgcagcgtg 180  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  32879774 gagttaactcacgcatgtgttaatttcagcgtgagttaactcacgcagcgtg 32879723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 4810781 - 4810835
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||||||||||||| |||||||||||||||||||||| ||| |||||||||    
T  4810781 gtgataatccatagtagataaaataaaacacttcataaaatatatgaaatctgaa 4810835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 726 - 792
Target Start/End: Original strand, 17073113 - 17073179
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgtacaacaactt 792  Q
    |||| |||||| |||| ||||||| ||||| ||||| ||||||||||||||||||||||||||||||    
T  17073113 tagctgagtttgcatgaaaattagggtattttgtttgtaaatgtattaaataagtgtacaacaactt 17073179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 886 - 943
Target Start/End: Complemental strand, 17200517 - 17200459
Alignment:
Q  886 cattttagagggaatttgttgggt-aaattgctgctaacctaatgcagcattttagagg 943  Q
    ||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  17200517 cattttagatggaatttgttaggttaaattgctgctaacctaatgcagcattttagagg 17200459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 29202783 - 29202729
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||    
T  29202783 gtgataatccatagtagacgaaataaaacacatcataaaatgtatgaaatctgaa 29202729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 883 - 943
Target Start/End: Complemental strand, 17200607 - 17200546
Alignment:
Q  883 ctgcattttagagggaatttgttgggt-aaattgctgctaacctaatgcagcattttagagg 943  Q
    |||||||||||| | |||||||| ||| ||||||||||||||||||||||||||||||||||    
T  17200607 ctgcattttagatgaaatttgttaggttaaattgctgctaacctaatgcagcattttagagg 17200546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 726 - 783
Target Start/End: Complemental strand, 17203403 - 17203346
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| |||||||||||| ||||||||||| |||| ||||||||||||||||    
T  17203403 tagccgagtttgcatggaaattagggtattctgtttgtaaacgtattaaataagtgta 17203346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 882 - 987
Target Start/End: Original strand, 16799508 - 16799615
Alignment:
Q  882 gctgcattttagagggaatttgttgggt-aaattgctgctaacctaatgcagcattttagagggaaattagta-gttaacttgttgc-gatctaataaaa 978  Q
    ||||||||||||| | |||||||| ||| |||||||| ||||||||||||| |||||||||||||||||| || ||| | ||| ||| || |||||||||    
T  16799508 gctgcattttagatgaaatttgttaggttaaattgct-ctaacctaatgcaacattttagagggaaattattaggttcagttgctgcagacctaataaaa 16799606  T
Q  979 ttaataaat 987  Q
    |||||||||    
T  16799607 ttaataaat 16799615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 30746606 - 30746520
Alignment:
Q  36 ttgtcgaaaatatccctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgacttaagtcacgc 123  Q
    |||||||||||  ||||||| ||||||||||| ||| |||||||  | ||| |||||| |||| ||||||||||||||||||||||||    
T  30746606 ttgtcgaaaatgcccctgcgttagttaactaacgcacgtgtaaatcaaacatgacttaatttt-acacatgcgtgacttaagtcacgc 30746520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 1394405 - 1394363
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  1394405 ttgacatacgaataataaaatgcaatatataattggtaacggt 1394363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 17203617 - 17203575
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  17203617 ttgacatacgaataataaaatgcaatatataattggtaacggt 17203575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 17905577 - 17905631
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||| ||||||||||||||||||||||||  |||||||||| |||||||||    
T  17905577 gtgataatacatagtagacaaaataaaacactttgtaaaatgtattaaatctgaa 17905631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 896 - 987
Target Start/End: Original strand, 24223167 - 24223261
Alignment:
Q  896 ggaatttgttgggt-aaattgctgctaacctaatgcagcattttagagggaaattagta-gttaacttgttgc-gatctaataaaattaataaat 987  Q
    |||||||||| ||| |||||| ||||||||||||||||||||| |||||||||||| || ||||| ||| ||| || | ||||||||||||||||    
T  24223167 ggaatttgttaggttaaattgttgctaacctaatgcagcatttaagagggaaattattaggttaagttgatgcagaccaaataaaattaataaat 24223261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 726 - 783
Target Start/End: Original strand, 17906324 - 17906381
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| |||||||||||| ||||| ||||| |||| ||||||||||||||||    
T  17906324 tagccgagtttgcatggaaattagggtattatgtttgtaaacgtattaaataagtgta 17906381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 151
Target Start/End: Original strand, 5741239 - 5741339
Alignment:
Q  52 tgcgctagttaactaaagcaagtgtaaaaaa-tacaagacttagtttttacacatgcgtgacttaagtcacgccacgcgagttaactcacgcacgtgtta 150  Q
    ||||||||||| |||| |||||||||||||| ||   || |||||||||| ||||||| ||||||||||| ||  | |||||||||||||||  ||||||    
T  5741239 tgcgctagttatctaacgcaagtgtaaaaaaataagggatttagtttttatacatgcgcgacttaagtcatgctgcacgagttaactcacgcgggtgtta 5741338  T
Q  151 a 151  Q
    |    
T  5741339 a 5741339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 9829309 - 9829257
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||||||||||||||||||||||  |||| ||||||||||| |||||||||    
T  9829309 gtgataatccatagtagacaaaataaa--acttaataaaatgtatgaaatctgaa 9829257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 17905521 - 17905560
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaac 262  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  17905521 ttgacatacgaataataaaatgcaatatataattggtaac 17905560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 143
Target Start/End: Original strand, 1860348 - 1860433
Alignment:
Q  57 tagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgacttaagtcacgccacgcgagttaactcacgca 143  Q
    ||||||||||| ||| |||||||  | ||| |||||| |||| |||||||||||||||||||||||| ||   ||||||||||||||    
T  1860348 tagttaactaacgcatgtgtaaatcaaacatgacttaatttt-acacatgcgtgacttaagtcacgcaacataagttaactcacgca 1860433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 4099598 - 4099640
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| |||||||||||||||||||||||| ||||||||    
T  4099598 ttgacatacgaataataaaatgcaatatataattagtaacggt 4099640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 9929549 - 9929618
Alignment:
Q  11 cacaaaacactcgcgcccttcagtgttgtcgaaaatatccctgcgctagttaactaaagcaagtgtaaaa 80  Q
    ||||||||||||||||||| |||||||| | |||||  |||| || ||||||| ||| ||||||||||||    
T  9929549 cacaaaacactcgcgccctgcagtgttgccaaaaatgcccctacgttagttaattaacgcaagtgtaaaa 9929618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 730 - 783
Target Start/End: Complemental strand, 23622822 - 23622769
Alignment:
Q  730 cgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||| |||||||||||| ||||||| ||| |||| ||||||||||||||||    
T  23622822 cgagtttgcatggaaattagggtattctttttgtaaacgtattaaataagtgta 23622769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 726 - 783
Target Start/End: Complemental strand, 29202006 - 29201949
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| |||||||||||| ||||||||||| ||||  |||||||||| ||||    
T  29202006 tagccgagtttgcatggaaattagggtattctgtttgtaaacatattaaataaatgta 29201949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 696 - 749
Target Start/End: Original strand, 33482085 - 33482138
Alignment:
Q  696 agagaaacacggtatagggtttgctatatatagccgagtttacatggaaattag 749  Q
    ||||||||||||| ||||||||| |||||||||||||| || |||| |||||||    
T  33482085 agagaaacacggtttagggtttgttatatatagccgaggttgcatgaaaattag 33482138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 26622235 - 26622275
Alignment:
Q  129 gagttaactcacgcacgtgttaatttcagcgtgagttaact 169  Q
    ||||||||||||||| ||||||||||||||| |||||||||    
T  26622235 gagttaactcacgcaggtgttaatttcagcgcgagttaact 26622275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 26728213 - 26728253
Alignment:
Q  129 gagttaactcacgcacgtgttaatttcagcgtgagttaact 169  Q
    ||||||||||||||| ||||||||||||||| |||||||||    
T  26728213 gagttaactcacgcaggtgttaatttcagcgcgagttaact 26728253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 142
Target Start/End: Original strand, 32879699 - 32879746
Alignment:
Q  95 tttttacacatgcgtgacttaagtcacgccacgcgagttaactcacgc 142  Q
    ||||||||| |||||||||||||||||||  || ||||||||||||||    
T  32879699 tttttacacttgcgtgacttaagtcacgctgcgtgagttaactcacgc 32879746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 720 - 783
Target Start/End: Complemental strand, 34294465 - 34294402
Alignment:
Q  720 tatatatagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    |||||||| || ||||| |||| ||||||| ||||||||||| ||||  |||||||||||||||    
T  34294465 tatatataaccaagtttgcatgaaaattagggtattctgtttgtaaacatattaaataagtgta 34294402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 261
Target Start/End: Original strand, 4810724 - 4810762
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaa 261  Q
    ||||||||| ||||||||||||||||||||||| |||||    
T  4810724 ttgacatacgaataataaaatgcaatatataataggtaa 4810762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 9829365 - 9829323
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    |||| |||| ||||||||||||||||||||||| |||||||||    
T  9829365 ttgatatacgaataataaaatgcaatatataataggtaacggt 9829323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 651 - 685
Target Start/End: Original strand, 24223273 - 24223307
Alignment:
Q  651 attcttttgttgtctgtgtaatttaccaaggttta 685  Q
    |||||||||||||||||||||||||||| ||||||    
T  24223273 attcttttgttgtctgtgtaatttaccacggttta 24223307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 29202839 - 29202797
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    |||||||||  ||||||||||| ||||||||||||||||||||    
T  29202839 ttgacatacggataataaaatgtaatatataattggtaacggt 29202797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 257
Target Start/End: Original strand, 32207951 - 32207985
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattg 257  Q
    |||||||| ||||||||||||||||||||||||||    
T  32207951 ttgacatagaaataataaaatgcaatatataattg 32207985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 34294646 - 34294604
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||| ||| ||||||||||||||||||||||||| |||||||    
T  34294646 ttgacgtacgaataataaaatgcaatatataattgataacggt 34294604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 726 - 783
Target Start/End: Complemental strand, 809532 - 809475
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||| ||||| |||| ||||||  ||||||||||| |||| ||||||||||||||||    
T  809532 tagccaagtttgcatgaaaattaaggtattctgtttgtaaacgtattaaataagtgta 809475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 726 - 783
Target Start/End: Original strand, 4099815 - 4099872
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||| ||| |||| ||||||| ||||| ||||| |||| ||||||||||||||||    
T  4099815 tagccgaatttgcatgaaaattagggtattttgtttgtaaacgtattaaataagtgta 4099872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 726 - 783
Target Start/End: Original strand, 26832041 - 26832098
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||| ||||| |||||||||||   |||||||||| |||| ||||||||||||||||    
T  26832041 tagcctagtttgcatggaaattaagatattctgtttgtaaacgtattaaataagtgta 26832098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 726 - 783
Target Start/End: Original strand, 32208157 - 32208214
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    |||||||||||  ||||||||||| ||||||| ||| |||| |||| |||||||||||    
T  32208157 tagccgagtttgtatggaaattagcgtattctatttgtaaacgtatcaaataagtgta 32208214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 193; Significance: 1e-104; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 346 - 749
Target Start/End: Complemental strand, 17756452 - 17756047
Alignment:
Q  346 ataaggttttgaacgaaacaaaattctgattaagttcaaaaaacatgacattacacgacacagtctcaatccttagataatagaccaagaaattgcgaca 445  Q
    |||| ||||||||||||||||||||  |||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  17756452 ataaagttttgaacgaaacaaaatttagattaagttcgaaaaacatgtcattacacgacacagtctgaatccttagataatagaccaagaaattacgaca 17756353  T
Q  446 aaactaaataggaagatggccaatattggtgtaaacacctcaaactaaaaactaaaaacgcgaaaaggatattccaattctnnnnnnnnntatgcatatc 545  Q
    ||||||||||||||||  | ||| ||||||||||||  ||||||| |||||| ||||| || |||||||||||||||||||         | ||||||||    
T  17756352 aaactaaataggaagactgacaaaattggtgtaaacttctcaaacaaaaaacaaaaaatgcaaaaaggatattccaattct-caaaaatatgtgcatatc 17756254  T
Q  546 gataaaatgcatgttaaattagaataccagttaagcagtggtatgagaggaaggttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaat 645  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||| |||||||||||| |||||||||| |||||||||||||    
T  17756253 gataaaatgcatgttaaattagaataccagttaagtaatggtatgagaggaaggttgtaaggccacgtccttccatttgcaaaaattaaaatatcaaaat 17756154  T
Q  646 atgtgattcttttgttgtctgtgtaatttaccaaggttta---tgnnnnnnnnagagaaacacggtatagggtttgctatatatagccgagtttacatgg 742  Q
    || ||||| || || ||||||||||||||||||   ||||   |         |||||||| |||| |||||||||||||||||||| |||||| |||||    
T  17756153 atatgattattctgctgtctgtgtaatttaccacaatttaggtttttttttttagagaaacgcggtttagggtttgctatatatagctgagtttgcatgg 17756054  T
Q  743 aaattag 749  Q
    |||||||    
T  17756053 aaattag 17756047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 346 - 749
Target Start/End: Complemental strand, 19057772 - 19057367
Alignment:
Q  346 ataaggttttgaacgaaacaaaattctgattaagttcaaaaaacatgacattacacgacacagtctcaatccttagataatagaccaagaaattgcgaca 445  Q
    |||| ||||||||||||||||||||  |||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  19057772 ataaagttttgaacgaaacaaaatttagattaagttcgaaaaacatgtcattacacgacacagtctgaatccttagataatagaccaagaaattacgaca 19057673  T
Q  446 aaactaaataggaagatggccaatattggtgtaaacacctcaaactaaaaactaaaaacgcgaaaaggatattccaattctnnnnnnnnntatgcatatc 545  Q
    ||||||||||||||||  | ||| ||||||||||||  ||||||| |||||| ||||| || |||||||||||||||||||         | ||||||||    
T  19057672 aaactaaataggaagactgacaaaattggtgtaaacttctcaaacaaaaaacaaaaaatgcaaaaaggatattccaattct-caaaaatatgtgcatatc 19057574  T
Q  546 gataaaatgcatgttaaattagaataccagttaagcagtggtatgagaggaaggttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaat 645  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||| |||||||||||| |||||||||| |||||||||||||    
T  19057573 gataaaatgcatgttaaattagaataccagttaagtaatggtatgagaggaaggttgtaaggccacgtccttccatttgcaaaaattaaaatatcaaaat 19057474  T
Q  646 atgtgattcttttgttgtctgtgtaatttaccaaggttta---tgnnnnnnnnagagaaacacggtatagggtttgctatatatagccgagtttacatgg 742  Q
    || ||||| || || ||||||||||||||||||   ||||   |         |||||||| |||| |||||||||||||||||||| |||||| |||||    
T  19057473 atatgattattctgctgtctgtgtaatttaccacaatttaggtttttttttttagagaaacgcggtttagggtttgctatatatagctgagtttgcatgg 19057374  T
Q  743 aaattag 749  Q
    |||||||    
T  19057373 aaattag 19057367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 122; E-Value: 5e-62
Query Start/End: Original strand, 536 - 749
Target Start/End: Original strand, 25916919 - 25917132
Alignment:
Q  536 tatgcatatcgataaaatgcatgttaaattagaataccagttaagcagtggtatgagaggaaggttgcaaggtcacgtccttccaattgcaaaaatcaaa 635  Q
    ||||||||||||||||||||||||||||||| |||| ||||||| || ||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  25916919 tatgcatatcgataaaatgcatgttaaattataatatcagttaatcaatggtatgagaggaaggttgtaaggtcacgtccttccatttgcaaaaatcaaa 25917018  T
Q  636 atatcaaaatatgtgattcttttgttgtctgtgtaatttaccaaggtttatgnnnnnnnnagagaaacacggtatagggtttgctatatatagccgagtt 735  Q
    |||||||||||| ||| |||| || ||||||||||||| |||| |||||| |        ||||||||||||| |||||||||||||||||||| |||||    
T  25917019 atatcaaaatatatgaatcttctgctgtctgtgtaattaaccacggtttaggttttttttagagaaacacggtttagggtttgctatatatagctgagtt 25917118  T
Q  736 tacatggaaattag 749  Q
    | ||||| ||||||    
T  25917119 tgcatgggaattag 25917132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 112; E-Value: 5e-56
Query Start/End: Original strand, 536 - 749
Target Start/End: Complemental strand, 25938247 - 25938030
Alignment:
Q  536 tatgcatatcgataaaatgcatgttaaattagaa---taccagttaagcagtggtatgagaggaaggttgcaaggtcacgtccttccaattgcaaaaatc 632  Q
    |||||||| |||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||| ||||||||||||||||| || ||||||||    
T  25938247 tatgcataccgataaaatgcatgttaaattagaagaataccagttaagcagtggtatgagatgaaggttgtaaggtcacgtccttccattttcaaaaatc 25938148  T
Q  633 aaaatatcaaaatatgtgattcttttgttgtctgtgtaatttaccaaggtttatg-nnnnnnnnagagaaacacggtatagggtttgctatatatagccg 731  Q
    ||||||||||||||| |||||||| | |||| |||||||||||||| |||||| |         ||||||||||||| ||||||||| ||||||||| ||    
T  25938147 aaaatatcaaaatatatgattcttctattgtatgtgtaatttaccacggtttaggtttttttttagagaaacacggtttagggtttgttatatatagtcg 25938048  T
Q  732 agtttacatggaaattag 749  Q
    ||||| ||||||||||||    
T  25938047 agtttgcatggaaattag 25938030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 696 - 905
Target Start/End: Original strand, 25716672 - 25716885
Alignment:
Q  696 agagaaacacggtatagggtttgctatatatagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgtacaacaacttg-c 794  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||| |||||||  |||||||||| |||| |||||||||||||||||||||||||| |    
T  25716672 agagaaacacggtttagggtttgctatatatagccgagttttcatgtaaattaggatattctgtttgtaaacgtattaaataagtgtacaacaacttgtc 25716771  T
Q  795 caaaagaagtcaatag-----atatatacaaaccaatgacacaacatgataggaatgaaaa-actcatgagtgaggagaaataataagggattgctgcat 888  Q
     |||| ||||||| ||     ||| ||| | ||  ||||||||||||||||||||||||||  ||||| ||||||||||||| || ||||||||||||||    
T  25716772 aaaaaaaagtcaacagaaacaatagatatatac--atgacacaacatgataggaatgaaaagtctcattagtgaggagaaat-attagggattgctgcat 25716868  T
Q  889 tttagagggaatttgtt 905  Q
    |||||||||||||||||    
T  25716869 tttagagggaatttgtt 25716885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 346 - 461
Target Start/End: Complemental strand, 25938392 - 25938278
Alignment:
Q  346 ataaggttttgaacgaaacaaaattctgattaagttcaaaaaacatgacattacacgacacagtctcaatccttagataatagaccaagaaattgcgaca 445  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||     
T  25938392 ataaggttttgaacgaaacaaaattcagattaagttcaaaaaacatgacattacacaacacagtctgaatccttagataatagaccaagaaattgcgac- 25938294  T
Q  446 aaactaaataggaaga 461  Q
    ||||||||||||||||    
T  25938293 aaactaaataggaaga 25938278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 696 - 905
Target Start/End: Original strand, 9240564 - 9240787
Alignment:
Q  696 agagaaacacggtatagggtttgctatatatagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgtacaacaac---tt 792  Q
    ||||||| ||| | |||| |||||||| ||||||| ||||| |||||||||| | ||||||||||| |||| |||||||||||||||||||||||   ||    
T  9240564 agagaaatacgatttaggatttgctatttatagccaagtttgcatggaaatttgggtattctgtttgtaaacgtattaaataagtgtacaacaacaactt 9240663  T
Q  793 gccaaaagaa----gtc---------aatagatatatacaaaccaatgacacaacatgataggaatgaaaaactcatgagtgaggagaaataataaggga 879  Q
    |  |||||||    |||         ||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||| || |||||    
T  9240664 gtaaaaagaaaaaagtctacagaaacaatagatatatacaaacga-tgacacaacatgataggaatgaaaaactcatcagtgaggagaaat-attaggga 9240761  T
Q  880 ttgctgcattttagagggaatttgtt 905  Q
    |||||||||||| |||| ||||||||    
T  9240762 ttgctgcatttttgaggaaatttgtt 9240787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 726 - 905
Target Start/End: Complemental strand, 17756044 - 17755855
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgtacaacaacttgccaaaagaa-----gt-------caatagata 813  Q
    ||||||||||| |||||||||||| ||| |||  || |||| |||||||||||||||||||||||||| ||||| ||     ||       |||||||||    
T  17756044 tagccgagtttgcatggaaattagggtagtctaattgtaaacgtattaaataagtgtacaacaacttgtcaaaaaaaaaagtgtacagaagcaatagata 17755945  T
Q  814 tatacaaaccaatgacacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctgcattttagagggaatttgtt 905  Q
    ||||||||| | ||| |||||| ||||||||||||||  |||| |||||||||||||| || ||||||||||||||||||||| ||||||||    
T  17755944 tatacaaacga-tgatacaacaggataggaatgaaaagatcatcagtgaggagaaatatta-gggattgctgcattttagaggaaatttgtt 17755855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 726 - 905
Target Start/End: Complemental strand, 19057364 - 19057175
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgtacaacaacttgccaaaagaa-----gt-------caatagata 813  Q
    ||||||||||| |||||||||||| ||| |||  || |||| |||||||||||||||||||||||||| ||||| ||     ||       |||||||||    
T  19057364 tagccgagtttgcatggaaattagggtagtctaattgtaaacgtattaaataagtgtacaacaacttgtcaaaaaaaaaagtgtacagaagcaatagata 19057265  T
Q  814 tatacaaaccaatgacacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctgcattttagagggaatttgtt 905  Q
    ||||||||| | ||| |||||| ||||||||||||||  |||| |||||||||||||| || ||||||||||||||||||||| ||||||||    
T  19057264 tatacaaacga-tgatacaacaggataggaatgaaaagatcatcagtgaggagaaatatta-gggattgctgcattttagaggaaatttgtt 19057175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 726 - 905
Target Start/End: Original strand, 25917232 - 25917420
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgtacaacaacttgcc--aaaagaagt---------caatagatat 814  Q
    ||||||||||| | || ||||||| ||||||||||| |||| |||||||||||||||||||||||||| |  |||| ||||         ||||||||||    
T  25917232 tagccgagtttgcgtgaaaattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtcaaaaaaaaagtctacagaaacaatagatat 25917331  T
Q  815 atacaaaccaatgacacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctgcattttagagggaatttgtt 905  Q
    ||||||| | ||||||||||| |||||||||||||| ||||| |||| ||| ||||| ||| |||| | || |||||||||||||||||||    
T  25917332 atacaaa-cgatgacacaacaggataggaatgaaaagctcattagtgtggaaaaatattaa-ggatggttgtattttagagggaatttgtt 25917420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 289 - 344
Target Start/End: Complemental strand, 17757991 - 17757936
Alignment:
Q  289 ggtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17757991 ggtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 17757936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 289 - 344
Target Start/End: Complemental strand, 19059311 - 19059256
Alignment:
Q  289 ggtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19059311 ggtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 19059256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 2702452 - 2702398
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  2702452 gtgataatccatagtagacaaaataaaacacttcataaaatgtatgaaatctgaa 2702398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 53047012 - 53047066
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  53047012 gtgataatccatagtagacaaaataaaacacttcataaaatgtatgaaatctgaa 53047066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 886 - 987
Target Start/End: Original strand, 9240807 - 9240911
Alignment:
Q  886 cattttagagggaatttgttgggt-aaattgctgctaacctaatgcagcattttagagggaaattagta-gttaacttgttgc-gatctaataaaattaa 982  Q
    ||||||||| |||||||||| ||| |||||| || ||||||||||||||||||||||||||||||| || ||||| ||||||| ||  ||||||||||||    
T  9240807 cattttagatggaatttgttaggttaaattgttgttaacctaatgcagcattttagagggaaattattaggttaagttgttgcagacgtaataaaattaa 9240906  T
Q  983 taaat 987  Q
    |||||    
T  9240907 taaat 9240911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 882 - 987
Target Start/End: Original strand, 25917436 - 25917544
Alignment:
Q  882 gctgcattttagagggaatttgttgggt-aaattgctgctaacctaatgcagcattttagagggaaattagta-gttaacttgttgc-gatctaataaaa 978  Q
    ||||||||||||| |||||||||| ||| |||||||||||||||||||| | |||||||||||||||||| || ||||| ||| ||| ||  ||||||||    
T  25917436 gctgcattttagatggaatttgttaggttaaattgctgctaacctaatgtaacattttagagggaaattattaggttaagttgctgcagacttaataaaa 25917535  T
Q  979 ttaataaat 987  Q
    |||||||||    
T  25917536 ttaataaat 25917544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 52562628 - 52562740
Alignment:
Q  11 cacaaaacactcgcgcccttcagtgttgtcgaaaatatccctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtg 110  Q
    ||||||||||||| ||||| |||  ||| | |||||| ||||||||||||||||||| | |||||||||||| ||   |||||||||||||| || ||||    
T  52562628 cacaaaacactcgtgccctgcagccttgcccaaaatacccctgcgctagttaactaacgtaagtgtaaaaaaaacggaacttagtttttacagatacgtg 52562727  T
Q  111 acttaagtcacgc 123  Q
    | |||||||||||    
T  52562728 agttaagtcacgc 52562740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 42 - 121
Target Start/End: Original strand, 4040880 - 4040958
Alignment:
Q  42 aaaatatccctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgacttaagtcac 121  Q
    ||||||||||||||||| |||||||| |||||||| |||||||   ||||||||||||||| ||||||||||||||||||    
T  4040880 aaaatatccctgcgctaattaactaacgcaagtgt-aaaaataagggacttagtttttacatatgcgtgacttaagtcac 4040958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 887 - 987
Target Start/End: Complemental strand, 17755841 - 17755738
Alignment:
Q  887 attttagagggaatttgttgggt-aaattgctgctaacctaatgcagcattttagagggaaattagta-gttaacttgttgc-gatctaataaaattaat 983  Q
    |||||||| |||||||||| ||| ||||||||||||| |||||||| |||||||||||||||||| || ||||| ||| ||| || ||||||||||||||    
T  17755841 attttagatggaatttgttaggttaaattgctgctaatctaatgcaacattttagagggaaattattaggttaaattgctgcggacctaataaaattaat 17755742  T
Q  984 aaat 987  Q
    ||||    
T  17755741 aaat 17755738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 887 - 987
Target Start/End: Complemental strand, 19057161 - 19057058
Alignment:
Q  887 attttagagggaatttgttgggt-aaattgctgctaacctaatgcagcattttagagggaaattagta-gttaacttgttgc-gatctaataaaattaat 983  Q
    |||||||| |||||||||| ||| ||||||||||||| |||||||| |||||||||||||||||| || ||||| ||| ||| || ||||||||||||||    
T  19057161 attttagatggaatttgttaggttaaattgctgctaatctaatgcaacattttagagggaaattattaggttaaattgctgcggacctaataaaattaat 19057062  T
Q  984 aaat 987  Q
    ||||    
T  19057061 aaat 19057058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 726 - 793
Target Start/End: Complemental strand, 25938027 - 25937960
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgtacaacaacttg 793  Q
    ||||||| ||| |||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||    
T  25938027 tagccgaatttgcatggaaattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttg 25937960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 836916 - 836970
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  836916 gtgataatccatagtagacaaaataaaacacttcataaaatatatgaaatctgaa 836970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 11454144 - 11454090
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  11454144 gtgataatccatagtagacaaaataaaacacttcataaaatgtatgaaatatgaa 11454090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 46452569 - 46452515
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  46452569 gtgataatacatagtagacaaaataaaacacttcataaaatgtatgaaatctgaa 46452515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 47501257 - 47501311
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  47501257 gtgataatccatagttgacaaaataaaacacttcataaaatgtatgaaatctgaa 47501311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 45003300 - 45003413
Alignment:
Q  11 cacaaaacactcgcgcccttcagtgttgtcgaaaatatccctgcgctagttaactaaagcaagtgtaaaaa-atacaagacttagtttttacacatgcgt 109  Q
    ||||||||||||||||||| || |||||  ||||||  || |||  ||||||||||| | ||||||||||  ||||| |||||| |||||||||||||||    
T  45003300 cacaaaacactcgcgccctgcaatgttgctgaaaatgcccttgcattagttaactaacggaagtgtaaaactatacatgacttaatttttacacatgcgt 45003399  T
Q  110 gacttaagtcacgc 123  Q
    ||||||| ||||||    
T  45003400 gacttaaatcacgc 45003413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 882 - 987
Target Start/End: Complemental strand, 25937839 - 25937731
Alignment:
Q  882 gctgcattttagagggaatttgttgggt-aaattgctgctaacctaatgcagcattttagagggaaattagta-gttaacttgttgc-gatctaataaaa 978  Q
    ||||||||||||| |||||||||| ||| ||||||||||||||||||||||  |||||||||| |||||| || ||||| ||| |||  | |||||||||    
T  25937839 gctgcattttagatggaatttgttaggttaaattgctgctaacctaatgcataattttagaggaaaattattaggttaagttgctgcaaacctaataaaa 25937740  T
Q  979 ttaataaat 987  Q
    |||||||||    
T  25937739 ttaataaat 25937731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 16281031 - 16280945
Alignment:
Q  55 gctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgacttaagtcacgccacgcgagttaactcacgc 142  Q
    |||||||||||||  || |||||||||| ||  || ||||||||||||| |||||||||||||||||||| || ||||||||||||||    
T  16281031 gctagttaactaacccaggtgtaaaaaa-acgggatttagtttttacacttgcgtgacttaagtcacgccgcgtgagttaactcacgc 16280945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 289 - 344
Target Start/End: Complemental strand, 24365941 - 24365886
Alignment:
Q  289 ggtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||    
T  24365941 ggtgataatacatagtagacaaaataaaacacttcacaaaatgtatgaaatctgaa 24365886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 574 - 685
Target Start/End: Original strand, 47502456 - 47502567
Alignment:
Q  574 agttaagcagtggtatgagaggaaggttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaatatgtgattcttttgttgtctgtgtaatt 673  Q
    |||||||||||||||||||||||| |||| ||||||||||  ||||| |||||||  || |||||||| ||| | ||||| || |||||| |||| ||||    
T  47502456 agttaagcagtggtatgagaggaaagttgtaaggtcacgtatttccatttgcaaacctctaaatatcagaatttatgatttttgtgttgtgtgtgaaatt 47502555  T
Q  674 taccaaggttta 685  Q
    || || ||||||    
T  47502556 tatcacggttta 47502567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 42 - 123
Target Start/End: Complemental strand, 4041134 - 4041052
Alignment:
Q  42 aaaatatccctgcgctagttaactaaagcaagtgtaaaaaa-tacaagacttagtttttacacatgcgtgacttaagtcacgc 123  Q
    |||||| || || ||||||||||||| |||||||||||||| ||   ||| ||||||||||||||||||||||||||||||||    
T  4041134 aaaatacccatgtgctagttaactaacgcaagtgtaaaaaaataagggacctagtttttacacatgcgtgacttaagtcacgc 4041052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 36642839 - 36642893
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||    
T  36642839 gtgataatccatagtcgacaaaataaaacacttcataaaatgtatgaaatttgaa 36642893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 43017659 - 43017605
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||    
T  43017659 gtgataatccatagtagacaaaataaaacacttcataaaatatatgaaatatgaa 43017605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 291 - 344
Target Start/End: Complemental strand, 11454768 - 11454715
Alignment:
Q  291 tgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||| ||||    
T  11454768 tgataatccatagtatacaaaataaaacacttcataaaatgtatgaaatatgaa 11454715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 143
Target Start/End: Complemental strand, 36754220 - 36754119
Alignment:
Q  42 aaaatatccctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgacttaagtcacgccacgcgagttaactcacg 141  Q
    |||||| ||||||| ||||||||||| |||||||||| ||| |   ||||||||||||| |||| ||| ||||||||||||   || |||||||||||||    
T  36754220 aaaatacccctgcgttagttaactaacgcaagtgtaagaaaaaattgacttagtttttatacatacgtaacttaagtcacgttgcgtgagttaactcacg 36754121  T
Q  142 ca 143  Q
    ||    
T  36754120 ca 36754119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 883 - 987
Target Start/End: Original strand, 9240950 - 9241057
Alignment:
Q  883 ctgcattttagagggaatttgttgggt-aaattgctgctaacctaatgcagcattttagagggaaattagta-gttaacttgttgc-gatctaataaaat 979  Q
    |||||||||||| | ||||||||  || |||||| ||||||  ||||||||||||||| |||||||||| || ||||| ||||||| || ||||||||||    
T  9240950 ctgcattttagatgaaatttgttaagttaaattgatgctaatataatgcagcattttaaagggaaattattaggttaagttgttgcagagctaataaaat 9241049  T
Q  980 taataaat 987  Q
    ||||||||    
T  9241050 taataaat 9241057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 293 - 344
Target Start/End: Complemental strand, 23777233 - 23777182
Alignment:
Q  293 ataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||| |||||||||||||||||||| ||||||||||| |||||||||    
T  23777233 ataatccatggtagacaaaataaaacactttataaaatgtatgaaatctgaa 23777182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 883 - 987
Target Start/End: Original strand, 25716902 - 25717009
Alignment:
Q  883 ctgcattttagagggaatttgttgggt-aaattgctgctaacctaatgcagcattttagagggaaattagt-agttaacttgttgc-gatctaataaaat 979  Q
    |||||||| |||  ||||||||| ||| |||||||||||||||| ||||||||||||||||| |||||| | |||||| ||||||| || |||| |||||    
T  25716902 ctgcatttcagatagaatttgttaggttaaattgctgctaacctcatgcagcattttagaggaaaattattaagttaagttgttgcagacctaacaaaat 25717001  T
Q  980 taataaat 987  Q
    ||| ||||    
T  25717002 taacaaat 25717009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 836861 - 836903
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  836861 ttgacatacaaataataaaatgcaatatataataggtaacggt 836903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 860727 - 860685
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  860727 ttgacatacgaataataaaatgcaatatataattggtaacggt 860685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 20876534 - 20876576
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  20876534 ttgacatacgaataataaaatgcaatatataattggtaacggt 20876576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 38886879 - 38886921
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  38886879 ttgacatataaataataaaatgcaatatataattggtaacggt 38886921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 47501200 - 47501242
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  47501200 ttgacatacgaataataaaatgcaatatataattggtaacggt 47501242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 53046956 - 53046998
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  53046956 ttgacatacgaataataaaatgcaatatataattggtaacggt 53046998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 730 - 799
Target Start/End: Complemental strand, 2469328 - 2469259
Alignment:
Q  730 cgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgtacaacaacttgccaaaa 799  Q
    ||||||| |||||||||||  ||| ||| ||| |||| |||||||||||||||||||||||||| |||||    
T  2469328 cgagtttgcatggaaattaaggtagtctatttgtaaacgtattaaataagtgtacaacaacttgtcaaaa 2469259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 696 - 749
Target Start/End: Original strand, 9856272 - 9856325
Alignment:
Q  696 agagaaacacggtatagggtttgctatatatagccgagtttacatggaaattag 749  Q
    |||||||||  || ||||||||||||||||||||||||||| ||||||||||||    
T  9856272 agagaaacatagtttagggtttgctatatatagccgagtttgcatggaaattag 9856325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 292 - 344
Target Start/End: Original strand, 25916795 - 25916847
Alignment:
Q  292 gataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||| ||||||||| ||||||||||| ||||||||||||||||||| ||||    
T  25916795 gataattcatagtagaaaaaataaaacatttcataaaatgtataaaatttgaa 25916847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 300 - 344
Target Start/End: Complemental strand, 37760860 - 37760816
Alignment:
Q  300 atagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||||||||||||||||||||||| | |||||||    
T  37760860 atagtagacaaaataaaacacttcataaaatgtatgagatctgaa 37760816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 104
Target Start/End: Complemental strand, 52562850 - 52562754
Alignment:
Q  8 caacacaaaacactcgcgcccttcagtgttgtcgaaaatatccctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacaca 104  Q
    |||||||||||||| ||| | | |||  ||||| |||||| ||||||||||||||||||  |||||||||||||| |   || ||||||||||||||    
T  52562850 caacacaaaacacttgcgacttgcagccttgtccaaaatacccctgcgctagttaactagcgcaagtgtaaaaaaaatgggatttagtttttacaca 52562754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 262
Target Start/End: Complemental strand, 51654779 - 51654740
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaac 262  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  51654779 ttgacatacaaataataaaatgcaatatataattgataac 51654740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 17758049 - 17758007
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| |||||||||||| ||||||||||||||||||||    
T  17758049 ttgacatacgaataataaaatgtaatatataattggtaacggt 17758007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 19059369 - 19059327
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| |||||||||||| ||||||||||||||||||||    
T  19059369 ttgacatacgaataataaaatgtaatatataattggtaacggt 19059327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 37760926 - 37760884
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| ||||||||||||||||||||||| |||||||||    
T  37760926 ttgacatacgaataataaaatgcaatatataataggtaacggt 37760884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 45514324 - 45514378
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||| |||||| |||||||||||||| ||||||||||||||  ||||||||    
T  45514324 gtgataatacatagttgacaaaataaaacatttcataaaatgtatgtaatctgaa 45514378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 167
Target Start/End: Complemental strand, 51171126 - 51171088
Alignment:
Q  129 gagttaactcacgcacgtgttaatttcagcgtgagttaa 167  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  51171126 gagttaactcacgcacgtgttaatttcagcgtgacttaa 51171088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 726 - 783
Target Start/End: Original strand, 20876751 - 20876808
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| |||| ||||||| ||||| ||||| |||| ||||||||||||||||    
T  20876751 tagccgagtttgcatgaaaattagggtattttgtttgtaaacgtattaaataagtgta 20876808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 726 - 783
Target Start/End: Complemental strand, 35560514 - 35560458
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| |||||||||||| |||||||| |||||||  |||||||||||||||    
T  35560514 tagccgagtttgcatggaaattagagtattctg-ttttaaacttattaaataagtgta 35560458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 726 - 783
Target Start/End: Original strand, 38887094 - 38887151
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||| ||||| |||||||||||| ||||| ||||| |||| ||||||||||||||||    
T  38887094 tagccaagttttcatggaaattagggtattatgtttgtaaacgtattaaataagtgta 38887151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 730 - 783
Target Start/End: Complemental strand, 51654561 - 51654508
Alignment:
Q  730 cgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||| |||||||||| | ||||||||||| |||| ||||||||||||||||    
T  51654561 cgagtttgcatggaaattggggtattctgtttataaacgtattaaataagtgta 51654508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 805 - 905
Target Start/End: Original strand, 9856400 - 9856493
Alignment:
Q  805 caatagatatatacaaaccaatgacacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctgcattttagagggaatttgt 904  Q
    |||||||||||||||||| | ||||||||||||||| ||||||||| |||||      |||||||| || |||||||  ||||||||||||| |||||||    
T  9856400 caatagatatatacaaacga-tgacacaacatgatatgaatgaaaagctcat-----cggagaaat-attagggatttttgcattttagaggaaatttgt 9856492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 263
Target Start/End: Complemental strand, 10267419 - 10267379
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacg 263  Q
    ||||||||| |||||||||||| ||||||||||||||||||    
T  10267419 ttgacatacgaataataaaatgtaatatataattggtaacg 10267379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 16279281 - 16279372
Alignment:
Q  11 cacaaaacactcgcgcccttcagtgttgtcgaaaatatccctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacac 103  Q
    ||||||||||||||||| | |||   |||| ||||| || ||  ||||||||||||| |||||||||||||| ||  ||||||||||||||||    
T  16279281 cacaaaacactcgcgccgtgcagcaatgtctaaaatgtcactttgctagttaactaacgcaagtgtaaaaaa-acgtgacttagtttttacac 16279372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 16280917 - 16280968
Alignment:
Q  129 gagttaactcacgcacgtgttaatttcagcgtgagttaactcccgcagcgtg 180  Q
    |||||||||||| || ||||||||||| |||||||||||||| ||| |||||    
T  16280917 gagttaactcacccaagtgttaatttcggcgtgagttaactcacgcggcgtg 16280968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 265
Target Start/End: Complemental strand, 2702505 - 2702467
Alignment:
Q  227 catacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||| ||||||||||| |||||||||||||||||||||    
T  2702505 catacgaataataaaatacaatatataattggtaacggt 2702467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 604 - 674
Target Start/End: Complemental strand, 11523297 - 11523227
Alignment:
Q  604 aaggtcacgtccttccaattgcaaaaatcaaaatatcaaaatatgtgattcttttgttgtctgtgtaattt 674  Q
    ||||||||||| ||||| |||||||  || |||||||||||||| ||||| || |||||| |||| |||||    
T  11523297 aaggtcacgtctttccatttgcaaagctctaaatatcaaaatatatgatttttgtgttgtgtgtgaaattt 11523227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 167
Target Start/End: Complemental strand, 22754804 - 22754766
Alignment:
Q  129 gagttaactcacgcacgtgttaatttcagcgtgagttaa 167  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  22754804 gagttaactcacgcaagtgttaattccagcgtgagttaa 22754766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 35560643 - 35560589
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||  ||||||  ||||||||||||||||||||||| ||| |||||||||    
T  35560643 gtgataatttatagtattcaaaataaaacacttcataaaatatatgaaatctgaa 35560589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 726 - 783
Target Start/End: Complemental strand, 10267199 - 10267142
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    |||||||||||  ||||||||||| ||||||  | | |||||||||||||||||||||    
T  10267199 tagccgagtttgtatggaaattagggtattccatctataaatgtattaaataagtgta 10267142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 260
Target Start/End: Complemental strand, 11523356 - 11523319
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggta 260  Q
    |||| |||| ||||||||||||||||||||||||||||    
T  11523356 ttgatatacgaataataaaatgcaatatataattggta 11523319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 20513468 - 20513537
Alignment:
Q  11 cacaaaacactcgcgcccttcagtgttgtcgaaaatatccctgcgctagttaactaaagcaagtgtaaaa 80  Q
    ||||||||||||| ||||| |||| ||| | |||||| |  |||| ||||||||||| ||||||||||||    
T  20513468 cacaaaacactcgtgccctgcagtcttgcccaaaatacctttgcgttagttaactaacgcaagtgtaaaa 20513537  T

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Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 696 - 749
Target Start/End: Complemental strand, 52301126 - 52301073
Alignment:
Q  696 agagaaacacggtatagggtttgctatatatagccgagtttacatggaaattag 749  Q
    ||||||||||||| ||||| ||| ||||||||| | |||||| |||||||||||    
T  52301126 agagaaacacggtttagggcttggtatatatagtcaagtttatatggaaattag 52301073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 3e-45; HSPs: 93)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 569 - 793
Target Start/End: Complemental strand, 9711673 - 9711452
Alignment:
Q  569 ataccagttaagcagtggtatgagaggaaggttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaatatgtgattcttttgttgtctgtg 668  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||        ||||||||||| |||||||| |||||||||||    
T  9711673 ataccagttaagcagtggtatgagaggaaggttgtaaggtcacgtccttccatttgcaaag-------tatcaaaatatatgattcttatgttgtctgtg 9711581  T
Q  669 taatttaccaaggtttatgnnnnnnnn----agagaaacacggtatagggtttgctatatatagccgagtttacatggaaattagtgtattctgttttta 764  Q
    |||||||| | |||||| |            ||||||||||||| ||||||||||||||||||| | ||||| |||||||||||| ||||| ||||| ||    
T  9711580 taatttacaacggtttagggtttttttcttgagagaaacacggtttagggtttgctatatatagtcaagtttgcatggaaattagagtattatgtttgta 9711481  T
Q  765 aatgtattaaataagtgtacaacaacttg 793  Q
    || |||||||||||||||| |||||||||    
T  9711480 aacgtattaaataagtgtaaaacaacttg 9711452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 805 - 950
Target Start/End: Complemental strand, 19553486 - 19553342
Alignment:
Q  805 caatagatatatacaaaccaatgacacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctgcattttagagggaatttgt 904  Q
    |||||||||||||||||| | ||| |||||| |||| |||||||||| ||||  ||||| ||||||| || |||||||||||||||||||||||||||||    
T  19553486 caatagatatatacaaacga-tgaaacaacaggataagaatgaaaaattcatcggtgagaagaaatatta-gggattgctgcattttagagggaatttgt 19553389  T
Q  905 t-gggtaaattgctgctaacctaatgcagcattttagagggaaatta 950  Q
    | || ||||||| ||||||||||||||| |||||||||| |||||||    
T  19553388 taggttaaattggtgctaacctaatgcaacattttagagagaaatta 19553342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 805 - 987
Target Start/End: Original strand, 33117307 - 33117489
Alignment:
Q  805 caatagatatatacaaaccaatgacacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctgcattttagagggaatttgt 904  Q
    ||||| |||||||||||| | | || ||| |||||||||||||||| || || |||||| | ||||| || | |||||||||||||||||| | ||||||    
T  33117307 caataaatatatacaaacga-taacgcaatatgataggaatgaaaagcttattagtgagaataaatatta-gagattgctgcattttagagagcatttgt 33117404  T
Q  905 tgggtaaattgctgctaacctaatgcagcattttagagggaaattagt-agttaacttgttgc-gatctaataaaattaataaat 987  Q
    | ||| ||||||||||||| ||||||| ||||||||||| ||| || | |||||| ||||||| || ||||||||||||||||||    
T  33117405 taggttaattgctgctaacgtaatgcatcattttagaggaaaaatattaagttaagttgttgcagacctaataaaattaataaat 33117489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 42 - 142
Target Start/End: Complemental strand, 40361776 - 40361677
Alignment:
Q  42 aaaatatccctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgacttaagtcacgccacgcgagttaactcacg 141  Q
    |||||||||||||||||||||||||  | | |||||||||| ||  |||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  40361776 aaaatatccctgcgctagttaactagcgtacgtgtaaaaaa-acgggacttaatttttacacatgcgtgacttaagtcacgccacgtgagttaactcacg 40361678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 570 - 684
Target Start/End: Original strand, 18001617 - 18001731
Alignment:
Q  570 taccagttaagcagtggtatgagaggaaggttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaatatgtgattcttttgttgtctgtgt 669  Q
    |||||||||| ||||||||||||||||| |||| ||||||||||| ||||| |||||||  || |||||||||||||| ||||| || |||||| ||||     
T  18001617 taccagttaaacagtggtatgagaggaaagttgtaaggtcacgtctttccatttgcaaacctctaaatatcaaaatatatgatttttgtgttgtatgtga 18001716  T
Q  670 aatttaccaaggttt 684  Q
    ||||||||| |||||    
T  18001717 aatttaccacggttt 18001731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 864 - 987
Target Start/End: Complemental strand, 46883466 - 46883339
Alignment:
Q  864 gagaaataataagggattgctgcatttta--gagggaatttgttgggt-aaattgctgctaacctaatgcagcattttagagggaaattagta-gttaac 959  Q
    ||||||||||| |||||||||||||||||  |||| |||||||| ||| |||||||||||||||||||||||| |||||||||||||||| || |||||     
T  46883466 gagaaataata-gggattgctgcattttaaagaggtaatttgttaggttaaattgctgctaacctaatgcagccttttagagggaaattattaggttaag 46883368  T
Q  960 ttgttgc-gatctaataaaattaataaat 987  Q
    || |||| || ||||||||||||||||||    
T  46883367 ttattgcagacctaataaaattaataaat 46883339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 696 - 799
Target Start/End: Original strand, 11874760 - 11874864
Alignment:
Q  696 agagaaacacggtatagggtttgctatatatagccgagtttacatggaaattagtgtattc-tgtttttaaatgtattaaataagtgtacaacaacttgc 794  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||  |  |||| |||| |||||||||| |||||||||||||||     
T  11874760 agagaaacacggtttagggtttgctatatatagccgagtttgcatggaaattggtgtagccgagtttgtaaacgtattaaatatgtgtacaacaacttgt 11874859  T
Q  795 caaaa 799  Q
    |||||    
T  11874860 caaaa 11874864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 42 - 150
Target Start/End: Complemental strand, 16936191 - 16936084
Alignment:
Q  42 aaaatatccctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgacttaagtcacgccacgcgagttaactcacg 141  Q
    |||||| || |||||||||||||||| |||||||||||||| || |||||||||||||| ||||| ||||||||||||||||| |  ||||||||||| |    
T  16936191 aaaatacccttgcgctagttaactaacgcaagtgtaaaaaa-acgagacttagtttttagacatgtgtgacttaagtcacgccgcatgagttaactcatg 16936093  T
Q  142 cacgtgtta 150  Q
    || ||||||    
T  16936092 caggtgtta 16936084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 875 - 950
Target Start/End: Original strand, 29013802 - 29013878
Alignment:
Q  875 agggattgctgcattttagagggaatttgttgggt-aaattgctgctaacctaatgcagcattttagagggaaatta 950  Q
    |||||||||||||||||||||||||||||||  || |||||| ||||||||||||||||||||||||| ||||||||    
T  29013802 agggattgctgcattttagagggaatttgttaagttaaattgatgctaacctaatgcagcattttagatggaaatta 29013878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 570 - 685
Target Start/End: Complemental strand, 12900170 - 12900055
Alignment:
Q  570 taccagttaagcagtggtatgagaggaaggttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaatatgtgattcttttgttgtctgtgt 669  Q
    ||||||||||||||||| |||||||||| |||| ||||||| ||| ||||| ||| |||  || |||||||||||||| ||||| || |||||| ||||     
T  12900170 taccagttaagcagtggcatgagaggaaagttgtaaggtcaagtctttccatttgtaaacctctaaatatcaaaatatatgatttttgtgttgtatgtga 12900071  T
Q  670 aatttaccaaggttta 685  Q
    ||||||||| ||||||    
T  12900070 aatttaccacggttta 12900055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 48076751 - 48076697
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  48076751 gtgataatccatagtagacaaaataaaacacttcataaaatgtatgaaatctgaa 48076697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 8478613 - 8478667
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  8478613 gtgataatctatagtagacaaaataaaacacttcataaaatgtatgaaatctgaa 8478667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 12795592 - 12795646
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  12795592 gtgataattcatagtagacaaaataaaacacttcataaaatgtatgaaatctgaa 12795646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 57 - 139
Target Start/End: Original strand, 19487488 - 19487570
Alignment:
Q  57 tagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgacttaagtcacgccacgcgagttaactca 139  Q
    |||||||||||  ||||| ||||||||||  ||||||||||||||||||||||||||||| ||||||  || |||||||||||    
T  19487488 tagttaactaacacaagtataaaaaatacgtgacttagtttttacacatgcgtgacttaactcacgctgcgtgagttaactca 19487570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 36639738 - 36639684
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  36639738 gtgataatctatagtagacaaaataaaacacttcataaaatgtatgaaatctgaa 36639684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 825 - 897
Target Start/End: Original strand, 11874920 - 11874991
Alignment:
Q  825 atgacacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctgcattttagaggg 897  Q
    ||||||||||| |||||||||| ||| ||||| ||||||||||||| || |||||||||||||||||||||||    
T  11874920 atgacacaacaggataggaatggaaatctcatcagtgaggagaaat-attagggattgctgcattttagaggg 11874991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 582 - 678
Target Start/End: Complemental strand, 24050378 - 24050282
Alignment:
Q  582 agtggtatgagaggaaggttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaatatgtgattcttttgttgtctgtgtaatttacca 678  Q
    |||||||||||||||| |||| || |||||||| ||||| |||||||  || |||||||||||||| |||||||| |||||  |||| |||||||||    
T  24050378 agtggtatgagaggaaagttgtaaagtcacgtctttccatttgcaaacctctaaatatcaaaatatatgattcttgtgttgagtgtgaaatttacca 24050282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 4674966 - 4675069
Alignment:
Q  20 ctcgcgcccttcagtgttgtcgaaaatatccctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgacttaagtc 119  Q
    |||||||||| ||||  || | |||||| || || ||||||||||||| ||||||||||||||||   ||| |  |||||||||||||||||||||||||    
T  4674966 ctcgcgccctgcagtcatgaccaaaatacccatgtgctagttaactaatgcaagtgtaaaaaataagggaccttatttttacacatgcgtgacttaagtc 4675065  T
Q  120 acgc 123  Q
    ||||    
T  4675066 acgc 4675069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 293 - 344
Target Start/End: Complemental strand, 47769341 - 47769290
Alignment:
Q  293 ataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  47769341 ataatccataatagacaaaataaaacacttcataaaatgtatgaaatctgaa 47769290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 725 - 783
Target Start/End: Complemental strand, 7822128 - 7822070
Alignment:
Q  725 atagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    |||||||||||| |||||||||||| ||||||||||| |||| ||||||||||||||||    
T  7822128 atagccgagtttgcatggaaattagggtattctgtttgtaaacgtattaaataagtgta 7822070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 18000378 - 18000432
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||||||  ||||||||||||||||||||||||| |||||||||    
T  18000378 gtgataatccatagtagatgaaataaaacacttcataaaatgtatgaaatctgaa 18000432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 24050926 - 24050872
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||  ||||||||||||||||||||||||||||||||||| |||||||||    
T  24050926 gtgataatttatagtagacaaaataaaacacttcataaaatgtatgaaatctgaa 24050872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 32010581 - 32010635
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||| ||||    
T  32010581 gtgataattcatagtagacaaaataaaacacttcataaaatgtatgaaatatgaa 32010635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 47427876 - 47427930
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||| ||||    
T  47427876 gtgataatccatagtagacaaaataaaatacttcataaaatgtatgaaatttgaa 47427930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 52688632 - 52688674
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  52688632 ttgacatacaaataataaaatgcaatatataattggtaacggt 52688674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 52688752 - 52688794
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  52688752 ttgacatacaaataataaaatgcaatatataattggtaacggt 52688794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 726 - 799
Target Start/End: Original strand, 24389736 - 24389809
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgtacaacaacttgccaaaa 799  Q
    ||||||||||| |||| ||||||| ||||||||||| ||||  ||||||||||||||||| ||||||| |||||    
T  24389736 tagccgagtttgcatgaaaattagggtattctgtttgtaaacatattaaataagtgtacaccaacttgtcaaaa 24389809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 726 - 783
Target Start/End: Original strand, 53144347 - 53144404
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| |||||||||||| ||||||||||| |||| ||||||||||||||||    
T  53144347 tagccgagtttgcatggaaattagggtattctgtttgtaaacgtattaaataagtgta 53144404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 142
Target Start/End: Complemental strand, 53260298 - 53260213
Alignment:
Q  57 tagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgacttaagtcacgccacgcgagttaactcacgc 142  Q
    ||||||| ||| |||||||||||||| ||  || ||||||||||||||| |||||||||||||||||  || |||||||| |||||    
T  53260298 tagttaattaatgcaagtgtaaaaaaaacgtgatttagtttttacacatacgtgacttaagtcacgctgcgtgagttaacccacgc 53260213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 726 - 789
Target Start/End: Complemental strand, 2527271 - 2527208
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgtacaacaa 789  Q
    ||||||||||| |||| |||||||  |||| ||||| |||||||||||||||||||||||||||    
T  2527271 tagccgagtttgcatgaaaattaggatattttgtttgtaaatgtattaaataagtgtacaacaa 2527208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 139
Target Start/End: Original strand, 36153408 - 36153504
Alignment:
Q  41 gaaaatatccctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgacttaagtcacgccacgcgagttaactca 139  Q
    |||||| || ||||||||||||| ||| |||||||||||||||    |||||| ||||||||||||| |||||||||| ||| |||  |||||||||||    
T  36153408 gaaaatgtctctgcgctagttaagtaacgcaagtgtaaaaaatgg--gacttaatttttacacatgcatgacttaagttacgtcacatgagttaactca 36153504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 142
Target Start/End: Complemental strand, 36154057 - 36153969
Alignment:
Q  52 tgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgacttaagtcacgccacgcgagttaactcacgc 142  Q
    |||||||||||  ||| ||||||||||||||  | | |||||| ||||||||||||||||||||||| ||||| || ||||||| ||||||    
T  36154057 tgcgctagttatttaacgcaagtgtaaaaaa--cgaaacttagattttacacatgcgtgacttaagttacgccgcgtgagttaagtcacgc 36153969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 8478557 - 8478599
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  8478557 ttgacatacaaataataaaatgcaatatataataggtaacggt 8478599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 21580931 - 21580985
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||  ||||||||||||||||||||||||||||||| |||||||| ||||    
T  21580931 gtgataatttatagtagacaaaataaaacacttcataaaatatataaaatatgaa 21580985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 725 - 783
Target Start/End: Complemental strand, 22293501 - 22293443
Alignment:
Q  725 atagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    |||||||||||| ||| |||||||| ||||||||||| |||| ||||||||||||||||    
T  22293501 atagccgagtttgcatagaaattagggtattctgtttgtaaacgtattaaataagtgta 22293443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 22293714 - 22293672
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  22293714 ttgacatacgaataataaaatgcaatatataattggtaacggt 22293672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 725 - 783
Target Start/End: Complemental strand, 24050206 - 24050148
Alignment:
Q  725 atagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    |||||||||||| |||| ||||||| ||||||||||| |||| ||||||||||||||||    
T  24050206 atagccgagtttgcatgaaaattagggtattctgtttgtaaacgtattaaataagtgta 24050148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 291 - 341
Target Start/End: Complemental strand, 29968552 - 29968502
Alignment:
Q  291 tgataatccatagtagacaaaataaaacacttcataaaatgtataaaatct 341  Q
    ||||||| ||||||||||||||||||||||||||||| |||||| ||||||    
T  29968552 tgataatacatagtagacaaaataaaacacttcataatatgtatgaaatct 29968502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 53143058 - 53143100
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  53143058 ttgacatacaaataataaaatgcaatatataattgataacggt 53143100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 54652925 - 54652967
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  54652925 ttgacatacgaataataaaatgcaatatataattggtaacggt 54652967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 726 - 783
Target Start/End: Complemental strand, 2177649 - 2177592
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| |||||||| ||| ||||||||||| |||| ||||||||||||||||    
T  2177649 tagccgagtttgcatggaaaatagggtattctgtttataaacgtattaaataagtgta 2177592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 888 - 986
Target Start/End: Original strand, 7526446 - 7526547
Alignment:
Q  888 ttttagagggaatttgttgggt-aaattgctgctaacctaatgcagcattttagagggaaattagta-gttaacttgttgc-gatctaataaaattaata 984  Q
    ||||||| |||||||||| ||| ||||| ||||||||||| | ||||||||||||||||||||| || ||||| ||| ||| || ||||||||||| |||    
T  7526446 ttttagatggaatttgttaggttaaattactgctaacctacttcagcattttagagggaaattattaggttaagttgctgcagacctaataaaattgata 7526545  T
Q  985 aa 986  Q
    ||    
T  7526546 aa 7526547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 726 - 783
Target Start/End: Complemental strand, 7797876 - 7797819
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| ||| |||||||| ||||||||||| |||| ||||||||||||||||    
T  7797876 tagccgagtttgcattgaaattagggtattctgtttgtaaacgtattaaataagtgta 7797819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 303 - 344
Target Start/End: Original strand, 23952232 - 23952273
Alignment:
Q  303 gtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  23952232 gtagacaaaataaaacacttcataaaatgtatgaaatctgaa 23952273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 726 - 783
Target Start/End: Original strand, 28379557 - 28379614
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| |||| ||||||| ||||||||||| |||| ||||||||||||||||    
T  28379557 tagccgagtttgcatgaaaattagggtattctgtttgtaaacgtattaaataagtgta 28379614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 726 - 783
Target Start/End: Complemental strand, 28813736 - 28813679
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| |||||||||||  ||||||||||| |||| ||||||||||||||||    
T  28813736 tagccgagtttgcatggaaattaaggtattctgtttgtaaacgtattaaataagtgta 28813679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 696 - 749
Target Start/End: Original strand, 29013640 - 29013693
Alignment:
Q  696 agagaaacacggtatagggtttgctatatatagccgagtttacatggaaattag 749  Q
    ||||||||||||| |||||||| |||||||||||||||||| ||| ||||||||    
T  29013640 agagaaacacggtttagggtttactatatatagccgagtttgcatagaaattag 29013693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 726 - 783
Target Start/End: Original strand, 54653171 - 54653228
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| |||||||||||| |||||||| || |||| ||||||||||||||||    
T  54653171 tagccgagtttgcatggaaattagggtattctggttgtaaacgtattaaataagtgta 54653228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 879 - 950
Target Start/End: Complemental strand, 9711371 - 9711299
Alignment:
Q  879 attgctgcattttagagggaatttgttgggt-aaattgctgctaacctaatgcagcattttagagggaaatta 950  Q
    |||| ||||||||||| | |||||||| ||| ||||| ||||||||||||| |||||||||||||| ||||||    
T  9711371 attgttgcattttagatgaaatttgttaggttaaattactgctaacctaatacagcattttagaggaaaatta 9711299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 124
Target Start/End: Original strand, 26251445 - 26251516
Alignment:
Q  52 tgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgacttaagtcacgcc 124  Q
    |||||||||||||||| ||| |||||||  | ||| |||||| |||| |||||||||||||||||||||||||    
T  26251445 tgcgctagttaactaacgcatgtgtaaatcaaacatgacttaatttt-acacatgcgtgacttaagtcacgcc 26251516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 344
Target Start/End: Original strand, 41850970 - 41851021
Alignment:
Q  293 ataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||| ||||||||||||| |||||||||| ||| |||||||||    
T  41850970 ataatccatagtatacaaaataaaacatttcataaaatatattaaatctgaa 41851021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 265
Target Start/End: Complemental strand, 2177859 - 2177821
Alignment:
Q  227 catacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  2177859 catacgaataataaaatgcaatatataattggtaacggt 2177821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 2479132 - 2479186
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||| |||||||||||||||||||||  ||||||||||||| |||| ||||    
T  2479132 gtgataattcatagtagacaaaataaaacatatcataaaatgtatgaaatatgaa 2479186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 8119327 - 8119285
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| ||||||||||||||||||||||||| |||||||    
T  8119327 ttgacatacgaataataaaatgcaatatataattgttaacggt 8119285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 24050982 - 24050940
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| |||||||||||||||||||||||| ||||||||    
T  24050982 ttgacatacgaataataaaatgcaatatataattagtaacggt 24050940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 261
Target Start/End: Original strand, 28379338 - 28379376
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaa 261  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  28379338 ttgacatacgaataataaaatgcaatatataattggtaa 28379376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 28813948 - 28813906
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| |||| ||||||||||||||||||||||||||||    
T  28813948 ttgacatacgaatattaaaatgcaatatataattggtaacggt 28813906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 29968609 - 29968567
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| |||||| ||||||||||||||||||||||||||    
T  29968609 ttgacatacgaataatgaaatgcaatatataattggtaacggt 29968567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 36639798 - 36639756
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| ||||||||||||||||||||||| |||||||||    
T  36639798 ttgacatacgaataataaaatgcaatatataataggtaacggt 36639756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 41850910 - 41850952
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| ||||||||||||||||||||||||| |||||||    
T  41850910 ttgacatacgaataataaaatgcaatatataattgataacggt 41850952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 47427819 - 47427861
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||  |||||||||||||||||||||||||||||||||    
T  47427819 ttgacatatgaataataaaatgcaatatataattggtaacggt 47427861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 51721540 - 51721486
Alignment:
Q  52 tgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatg 106  Q
    |||| ||||||||||| ||||||||||||||| |  |||||||||||||||||||    
T  51721540 tgcgttagttaactaacgcaagtgtaaaaaatgcttgacttagtttttacacatg 51721486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 726 - 783
Target Start/End: Complemental strand, 8119121 - 8119064
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| |||| ||||||  ||||||||||| |||| ||||||||||||||||    
T  8119121 tagccgagtttgcatgaaaattaaggtattctgtttgtaaacgtattaaataagtgta 8119064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 260
Target Start/End: Original strand, 8396928 - 8396965
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggta 260  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  8396928 ttgacatacgaataataaaatgcaatatataattggta 8396965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 726 - 783
Target Start/End: Original strand, 8478743 - 8478800
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    |||||| |||| |||||||||||  ||||||||||| |||| ||||||||||||||||    
T  8478743 tagccgggtttgcatggaaattaaggtattctgtttataaacgtattaaataagtgta 8478800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 726 - 783
Target Start/End: Original strand, 18001810 - 18001867
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    |||||| |||| |||| ||||||| ||||||||||| |||| ||||||||||||||||    
T  18001810 tagccgtgtttgcatgaaaattagggtattctgtttgtaaacgtattaaataagtgta 18001867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 601 - 674
Target Start/End: Original strand, 28379394 - 28379467
Alignment:
Q  601 tgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaatatgtgattcttttgttgtctgtgtaattt 674  Q
    |||||||||||||| ||||| |||||||  || |||||||||||||| ||||| || |||||| |||| |||||    
T  28379394 tgcaaggtcacgtctttccatttgcaaagctctaaatatcaaaatatatgatttttgtgttgtgtgtgaaattt 28379467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 32304748 - 32304789
Alignment:
Q  129 gagttaactcacgcacgtgttaatttcagcgtgagttaactc 170  Q
    |||||||||||| || ||||||||||||||||||||||||||    
T  32304748 gagttaactcacacatgtgttaatttcagcgtgagttaactc 32304789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 51721090 - 51721151
Alignment:
Q  42 aaaatatccctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacac 103  Q
    ||||| |||||||  ||||||||||| |||||||||||||||||  |||||| |||||||||    
T  51721090 aaaatgtccctgcattagttaactaacgcaagtgtaaaaaatacctgacttaatttttacac 51721151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 263
Target Start/End: Original strand, 18000296 - 18000336
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacg 263  Q
    |||||| || |||||||||||||||||||||||||||||||    
T  18000296 ttgacaaacgaataataaaatgcaatatataattggtaacg 18000336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 32303818 - 32303890
Alignment:
Q  8 caacacaaaacactcgcgcccttcagtgttgtcgaaaatatccctgcgctagttaactaaagcaagtgtaaaa 80  Q
    |||||||||||||||||||||| |||   |  |||||||| |  |||||||||||||||| ||||||||||||    
T  32303818 caacacaaaacactcgcgccctgcaggcattccgaaaataccattgcgctagttaactaacgcaagtgtaaaa 32303890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 124
Target Start/End: Complemental strand, 34982014 - 34981932
Alignment:
Q  41 gaaaatatccctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgacttaagtcacgcc 124  Q
    ||||||||||||||  ||||||||||| | | |||||||  | ||| |||||| |||| ||||||| |||||||||||||||||    
T  34982014 gaaaatatccctgcattagttaactaacgtatgtgtaaatcaaacatgacttaatttt-acacatgtgtgacttaagtcacgcc 34981932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 53260185 - 53260236
Alignment:
Q  129 gagttaactcacgcacgtgttaatttcagcgtgagttaactcccgcagcgtg 180  Q
    ||||| ||||||||| ||||||||||| ||||| |||||||| |||||||||    
T  53260185 gagttgactcacgcatgtgttaatttcggcgtgggttaactcacgcagcgtg 53260236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 599 - 674
Target Start/End: Original strand, 54652979 - 54653054
Alignment:
Q  599 gttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaatatgtgattcttttgttgtctgtgtaattt 674  Q
    |||| ||||||||||| | ||| |||||||| || |||||||||||||| ||||| || |||||| |||| |||||    
T  54652979 gttgtaaggtcacgtcttgccatttgcaaaactctaaatatcaaaatatatgatttttgtgttgtgtgtgaaattt 54653054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 2479075 - 2479117
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||  ||| |||||||||||||||||||||||||||||    
T  2479075 ttgacatatgaatgataaaatgcaatatataattggtaacggt 2479117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 175
Target Start/End: Complemental strand, 5314436 - 5314390
Alignment:
Q  129 gagttaactcacgcacgtgttaatttcagcgtgagttaactcccgca 175  Q
    ||||||||||||||| ||||||||| |||||||| ||||||| ||||    
T  5314436 gagttaactcacgcaagtgttaattccagcgtgaattaactcacgca 5314390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 261
Target Start/End: Original strand, 12795536 - 12795574
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaa 261  Q
    ||||||||| ||||||||||||||||||||||| |||||    
T  12795536 ttgacatacgaataataaaatgcaatatataataggtaa 12795574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 175
Target Start/End: Complemental strand, 23811384 - 23811342
Alignment:
Q  133 taactcacgcacgtgttaatttcagcgtgagttaactcccgca 175  Q
    ||||||||||| ||||||||| |||||||||||||||| ||||    
T  23811384 taactcacgcaagtgttaattccagcgtgagttaactcacgca 23811342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 261
Target Start/End: Original strand, 23952167 - 23952205
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaa 261  Q
    ||||||||| ||||||||||||||||||||||| |||||    
T  23952167 ttgacatacgaataataaaatgcaatatataataggtaa 23952205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 322
Target Start/End: Complemental strand, 37325283 - 37325253
Alignment:
Q  292 gataatccatagtagacaaaataaaacactt 322  Q
    |||||||||||||||||||||||||||||||    
T  37325283 gataatccatagtagacaaaataaaacactt 37325253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 40277145 - 40277091
Alignment:
Q  88 gacttagtttttacacatgcgtgacttaagtcacgccacgcgagttaactcacgc 142  Q
    |||||||||||||||||||  || ||||||||||||| || ||||||| ||||||    
T  40277145 gacttagtttttacacatgaatgccttaagtcacgccgcgtgagttaagtcacgc 40277091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 44500977 - 44500935
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| ||||||||||||||||||||||||  |||||||    
T  44500977 ttgacatacgaataataaaatgcaatatataatttataacggt 44500935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 167
Target Start/End: Original strand, 46844627 - 46844665
Alignment:
Q  129 gagttaactcacgcacgtgttaatttcagcgtgagttaa 167  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  46844627 gagttaactcacgcaagtgttaatttcaacgtgagttaa 46844665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 261
Target Start/End: Complemental strand, 47769400 - 47769362
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaa 261  Q
    ||||||||| ||||||||||||||||||||||| |||||    
T  47769400 ttgacatacgaataataaaatgcaatatataataggtaa 47769362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 114
Target Start/End: Original strand, 53259769 - 53259843
Alignment:
Q  40 cgaaaatatccctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgactt 114  Q
    ||||||||  |||||| ||||||| ||| |||||||||||||  ||  ||||||||||||||| |||||| ||||    
T  53259769 cgaaaatactcctgcgttagttaattaacgcaagtgtaaaaataacgtgacttagtttttacagatgcgtaactt 53259843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 726 - 783
Target Start/End: Complemental strand, 4942214 - 4942157
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| |||| ||||||| |||| |||||| |||| |||||||| |||||||    
T  4942214 tagccgagtttgcatgaaaattagggtatactgtttgtaaacgtattaaacaagtgta 4942157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 256
Target Start/End: Complemental strand, 4942426 - 4942393
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataatt 256  Q
    ||||||||| ||||||||||||||||||||||||    
T  4942426 ttgacatacgaataataaaatgcaatatataatt 4942393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 265
Target Start/End: Complemental strand, 10467049 - 10467020
Alignment:
Q  236 aataaaatgcaatatataattggtaacggt 265  Q
    ||||||||||||||||||||||||||||||    
T  10467049 aataaaatgcaatatataattggtaacggt 10467020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 726 - 783
Target Start/End: Complemental strand, 12899987 - 12899930
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| |||| ||||||| | | ||||||| |||| ||||||||||||||||    
T  12899987 tagccgagtttgcatgaaaattagggcaatctgtttgtaaacgtattaaataagtgta 12899930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 16935489 - 16935554
Alignment:
Q  11 cacaaaacactcgcgcccttcagtgttgtcgaaaatatccctgcgctagttaactaaagcaagtgt 76  Q
    ||||||||||||||||||| |||  ||||| || ||| || |||||||||||| ||| ||||||||    
T  16935489 cacaaaacactcgcgccctgcagccttgtccaagatacccttgcgctagttaaataacgcaagtgt 16935554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 21283754 - 21283822
Alignment:
Q  11 cacaaaacactcgcgcccttcagtgttgtcgaaaatatccctgcgctagttaactaaagcaagtgtaaaa 80  Q
    |||||||||||||||||  | ||||||| ||||||| |||||  | ||||||||||| ||||||||||||    
T  21283754 cacaaaacactcgcgcctgt-agtgttgccgaaaatgtccctatgttagttaactaacgcaagtgtaaaa 21283822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 301 - 334
Target Start/End: Original strand, 32962687 - 32962720
Alignment:
Q  301 tagtagacaaaataaaacacttcataaaatgtat 334  Q
    ||||| ||||||||||||||||||||||||||||    
T  32962687 tagtaaacaaaataaaacacttcataaaatgtat 32962720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 48076807 - 48076766
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacgg 264  Q
    ||||||||| |||||||||||||||||||| || ||||||||    
T  48076807 ttgacatacgaataataaaatgcaatatatgataggtaacgg 48076766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 93; Significance: 1e-44; HSPs: 4)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 696 - 905
Target Start/End: Original strand, 12243 - 12459
Alignment:
Q  696 agagaaacacggtatag-ggtttgctatatatagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgtacaacaacttgc 794  Q
    ||||||||||||| ||  |||||||||||||||||||||||| |||||||||||| ||||| ||||| |||| |||||||||||||||||||||| |||     
T  12243 agagaaacacggtttaaaggtttgctatatatagccgagtttgcatggaaattagggtattatgtttgtaaacgtattaaataagtgtacaacaagttgt 12342  T
Q  795 caaaagaa-gt-------caatagatatatacaaaccaatgacacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctgc 886  Q
     |||| || ||       |||||||||||||||||| | ||||||||||||||||||||||||| ||||| ||||||||||||| || |||||||| ||     
T  12343 taaaaaaaagtacaaaaacaatagatatatacaaacga-tgacacaacatgataggaatgaaaagctcataagtgaggagaaat-attagggattgttgt 12440  T
Q  887 attttagagggaatttgtt 905  Q
    |||||||||||||||||||    
T  12441 attttagagggaatttgtt 12459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 289 - 344
Target Start/End: Original strand, 12071 - 12126
Alignment:
Q  289 ggtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  12071 ggtgataaaccatagtagacaaaataaaacacttcataaaatgtataaaatttgaa 12126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #3
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 595 - 685
Target Start/End: Original strand, 12142 - 12224
Alignment:
Q  595 gaaggttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaatatgtgattcttttgttgtctgtgtaatttaccaaggttta 685  Q
    |||||||| ||||||||||||||||| ||||||||        |||||||||| |||||||| || |||||||||||||||||| ||||||    
T  12142 gaaggttgtaaggtcacgtccttccatttgcaaaa--------atcaaaatatatgattcttctgctgtctgtgtaatttaccacggttta 12224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #4
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 882 - 987
Target Start/End: Original strand, 12475 - 12583
Alignment:
Q  882 gctgcattttagagggaatttgttgggt-aaattgctgctaacctaatgcagcattttagagggaaattagta-gttaacttgttgc-gatctaataaaa 978  Q
    ||||||||||||| | |||||||| ||| |||||  || ||||||||||| ||||||||||| | ||||| || | ||| ||||||| || |||||||||    
T  12475 gctgcattttagatgaaatttgttaggttaaattattggtaacctaatgccgcattttagagtgcaattattaggctaagttgttgcggacctaataaaa 12574  T
Q  979 ttaataaat 987  Q
    |||||||||    
T  12575 ttaataaat 12583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 2e-39; HSPs: 104)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 728 - 905
Target Start/End: Original strand, 16376276 - 16376463
Alignment:
Q  728 gccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgtacaacaacttgccaaaagaa---gtc---------aatagatata 815  Q
    ||||||||| |||||||||||| ||||||||||| |||| |||||||||||||||||||||||||| ||||| ||   |||         ||||||||||    
T  16376276 gccgagtttgcatggaaattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtcaaaaaaaaaagtctatggaaacaatagatata 16376375  T
Q  816 tacaaaccaatgacacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctgcattttagagggaatttgtt 905  Q
    ||||||| | ||||||||||||||||||||||||| ||||| ||||||||||||| || ||||||||||||| |||||||||||||||||    
T  16376376 tacaaacga-tgacacaacatgataggaatgaaaagctcatcagtgaggagaaat-attagggattgctgcactttagagggaatttgtt 16376463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 593 - 749
Target Start/End: Original strand, 16376015 - 16376175
Alignment:
Q  593 aggaaggttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaatatgtgattcttttgttgtctgtgtaatttaccaaggttta----tgn 688  Q
    |||||||||| |||| |||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| | ||||||    |      
T  16376015 aggaaggttgtaaggccacgtccttccatttgcaaaaatcaaaatatcaaaatatatgattcttctgttgtctgtgtaatttactacggtttaggttttt 16376114  T
Q  689 nnnnnnnagagaaacacggtatagggtttgctatatatagccgagtttacatggaaattag 749  Q
           ||||||||||||| |||| ||||||||||||||| |||||| ||| ||||||||    
T  16376115 tttttttagagaaacacggtttaggttttgctatatatagcggagtttgcatagaaattag 16376175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 30859772 - 30859901
Alignment:
Q  11 cacaaaacactcgcgcccttcagtgttgtcgaaaatatccctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtg 110  Q
    ||||||||||||||||||| |||   |  | |||||  |||||||| |||||||||| |||||||||||||| ||  |||||||||||||||||||| ||    
T  30859772 cacaaaacactcgcgccctgcagccattccaaaaatgcccctgcgcaagttaactaacgcaagtgtaaaaaaaacgggacttagtttttacacatgcatg 30859871  T
Q  111 acttaagtcacgccacgcgagttaactcac 140  Q
    |||||||||||||| || ||||||||||||    
T  30859872 acttaagtcacgccgcgtgagttaactcac 30859901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 886 - 987
Target Start/End: Complemental strand, 4455473 - 4455369
Alignment:
Q  886 cattttagagggaatttgttgggt-aaattgctgctaacctaatgcagcattttagagggaaattagta-gttaacttgttgc-gatctaataaaattaa 982  Q
    ||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||| || |||||||||||||    
T  4455473 cattttagatggaatttgttaggttaaattgctgctaacctaatgcagcattttagagggaaattattaggttaaattgttgcagacctaataaaattaa 4455374  T
Q  983 taaat 987  Q
    |||||    
T  4455373 taaat 4455369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 570 - 685
Target Start/End: Complemental strand, 16672292 - 16672177
Alignment:
Q  570 taccagttaagcagtggtatgagaggaaggttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaatatgtgattcttttgttgtctgtgt 669  Q
    |||||||||||||||||||||||||||| |||| |||||| |||| ||||| |||||||  || ||||||||||||||  ||||||| |||||| ||||     
T  16672292 taccagttaagcagtggtatgagaggaaagttgtaaggtctcgtctttccatttgcaaacctctaaatatcaaaatatacgattcttgtgttgtgtgtga 16672193  T
Q  670 aatttaccaaggttta 685  Q
    ||||||||| ||||||    
T  16672192 aatttaccacggttta 16672177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 570 - 685
Target Start/End: Complemental strand, 17646660 - 17646545
Alignment:
Q  570 taccagttaagcagtggtatgagaggaaggttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaatatgtgattcttttgttgtctgtgt 669  Q
    |||||||||||||||||||||||||||| |||| |||||| |||| ||||| |||||||  || ||||||||||||||  ||||||| |||||| ||||     
T  17646660 taccagttaagcagtggtatgagaggaaagttgtaaggtctcgtctttccatttgcaaacctctaaatatcaaaatatacgattcttgtgttgtgtgtga 17646561  T
Q  670 aatttaccaaggttta 685  Q
    ||||||||| ||||||    
T  17646560 aatttaccacggttta 17646545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 570 - 685
Target Start/End: Complemental strand, 28170637 - 28170522
Alignment:
Q  570 taccagttaagcagtggtatgagaggaaggttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaatatgtgattcttttgttgtctgtgt 669  Q
    ||||||||||||| |||||||||||||| |||| ||| ||| ||||||||| |||||||  || |||||||||||||| |||||||| |||||| ||||     
T  28170637 taccagttaagcaatggtatgagaggaaagttgtaagatcatgtccttccatttgcaaacctctaaatatcaaaatatatgattcttgtgttgtgtgtga 28170538  T
Q  670 aatttaccaaggttta 685  Q
    ||||||||| ||||||    
T  28170537 aatttaccacggttta 28170522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 576 - 670
Target Start/End: Complemental strand, 41279424 - 41279330
Alignment:
Q  576 ttaagcagtggtatgagaggaaggttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaatatgtgattcttttgttgtctgtgta 670  Q
    ||||||||||||||||||||||||||| || |||||| ||||||  |||||||||||||||||| ||||||| ||||||||||| || |||||||    
T  41279424 ttaagcagtggtatgagaggaaggttgtaatgtcacgaccttccgtttgcaaaaatcaaaatattaaaatatatgattcttttgctgcctgtgta 41279330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 726 - 799
Target Start/End: Complemental strand, 41279148 - 41279075
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgtacaacaacttgccaaaa 799  Q
    ||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  41279148 tagccgagtttgcatggaaattagggtattctgtttgtaaatgtattaaataagtgtacaacaacttgtcaaaa 41279075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 570 - 678
Target Start/End: Original strand, 11645394 - 11645502
Alignment:
Q  570 taccagttaagcagtggtatgagaggaaggttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaatatgtgattcttttgttgtctgtgt 669  Q
    ||||||||||| |||||||||||||| | |||| ||||||||||| ||||| |||||||  || |||||||||||||| |||||||| |||||| ||||     
T  11645394 taccagttaagaagtggtatgagaggtaagttgtaaggtcacgtctttccatttgcaaagctctaaatatcaaaatatatgattcttgtgttgtgtgtga 11645493  T
Q  670 aatttacca 678  Q
    |||||||||    
T  11645494 aatttacca 11645502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 806 - 905
Target Start/End: Complemental strand, 4455588 - 4455493
Alignment:
Q  806 aatagatatatacaaaccaatgacacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctgcattttagagggaatttgtt 905  Q
    ||||||||||||||||| | |||||||||| |||||||||||||||| ||| ||  |||||||||| || ||||||||||||||||||||||||||||||    
T  4455588 aatagatatatacaaacga-tgacacaacaggataggaatgaaaaacacatcag--aggagaaatatta-gggattgctgcattttagagggaatttgtt 4455493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 289 - 344
Target Start/End: Original strand, 5553672 - 5553727
Alignment:
Q  289 ggtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5553672 ggtgataatccatagtagacaaaataaaacactttataaaatgtataaaatctgaa 5553727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 2354141 - 2354195
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  2354141 gtgataatccatagtagacaaaataaaacacttcataaaatgtatgaaatctgaa 2354195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 291 - 344
Target Start/End: Original strand, 16375538 - 16375591
Alignment:
Q  291 tgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16375538 tgataatccttagtagacaaaataaaacacttcataaaatgtataaaatctgaa 16375591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 886 - 984
Target Start/End: Original strand, 16377426 - 16377527
Alignment:
Q  886 cattttagagggaatttgttgggt-aaattgctgctaacctaatgcagcattttagagggaaattagta-gttaacttgttgc-gatctaataaaattaa 982  Q
    ||||||||| |||||||||| ||| |||||||||||||||||||||||| |||||||||||||||| || ||||| ||  ||| ||||||||||||||||    
T  16377426 cattttagatggaatttgttaggttaaattgctgctaacctaatgcagctttttagagggaaattattaggttaagttactgcagatctaataaaattaa 16377525  T
Q  983 ta 984  Q
    ||    
T  16377526 ta 16377527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 805 - 905
Target Start/End: Original strand, 34988809 - 34988907
Alignment:
Q  805 caatagatatatacaaaccaatgacacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctgcattttagagggaatttgt 904  Q
    |||||||||||||||||| | |||||||||| |||| ||||||||| ||||| |||||||| |||| ||  ||||||||||||||||||| |||||||||    
T  34988809 caatagatatatacaaacga-tgacacaacaggatatgaatgaaaagctcataagtgaggataaat-atttgggattgctgcattttagaaggaatttgt 34988906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 898 - 987
Target Start/End: Original strand, 38694821 - 38694913
Alignment:
Q  898 aatttgttgggt-aaattgctgctaacctaatgcagcattttagagggaaattagta-gttaacttgttgc-gatctaataaaattaataaat 987  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||| ||| ||| || |||||||| |||||||||    
T  38694821 aatttgttgggttaaattgctgctaacctaatgcagcattttagagggaaattattaggttaagttgctgcagacctaataaacttaataaat 38694913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 828 - 903
Target Start/End: Original strand, 16377527 - 16377601
Alignment:
Q  828 acacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctgcattttagagggaatttg 903  Q
    |||||||| |||||||||||||| ||||| ||||||||||||| || |||||||||||||||||||||| ||||||    
T  16377527 acacaacaggataggaatgaaaagctcataagtgaggagaaat-attagggattgctgcattttagaggaaatttg 16377601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 696 - 783
Target Start/End: Complemental strand, 21224950 - 21224864
Alignment:
Q  696 agagaaacacggtatagggtttgctatatatagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| | ||||||||| |||||||| |  |||||||||||||||||| ||||||||||| |||| ||||||||||||||||    
T  21224950 agagaaacacgtt-tagggtttgatatatataacaaagtttacatggaaattagggtattctgtttgtaaacgtattaaataagtgta 21224864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 2852928 - 2852982
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  2852928 gtgataatccatagtagacaaaataaaacacttcataaaatatatgaaatctgaa 2852982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 4680613 - 4680667
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  4680613 gtgataatccatagtagacaaaataaaacaattcataaaatgtatgaaatctgaa 4680667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 4681338 - 4681392
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  4681338 gtgataatccatagtagacaaaataaaacacttcataaaatgtatgaaatatgaa 4681392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 294 - 344
Target Start/End: Complemental strand, 9396348 - 9396298
Alignment:
Q  294 taatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  9396348 taatccatagtagacaaaataaaacacttcataaaatgtatgaaatctgaa 9396298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 16362274 - 16362328
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  16362274 gtgataatccatagtagacaaaataaaatacttcataaaatgtatgaaatctgaa 16362328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 886 - 947
Target Start/End: Original strand, 16376483 - 16376545
Alignment:
Q  886 cattttagagggaatttgttgggt-aaattgctgctaacctaatgcagcattttagagggaaa 947  Q
    ||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  16376483 cattttagatggaatttgttaggttaaattgctgctaacctaatgcagcattttagagggaaa 16376545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 16673895 - 16673841
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  16673895 gtgataattcatagtagacaaaataaaacacttcataaaatgtatgaaatctgaa 16673841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 17648263 - 17648209
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  17648263 gtgataattcatagtagacaaaataaaacacttcataaaatgtatgaaatctgaa 17648209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 22773619 - 22773673
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  22773619 gtgataattcatagtagacaaaataaaacacttcataaaatgtatgaaatctgaa 22773673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 45418398 - 45418452
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  45418398 gtgataatccatagtagacaaaataaaacacttcataaaatgtatgaaatttgaa 45418452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 726 - 783
Target Start/End: Original strand, 16491867 - 16491924
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||    
T  16491867 tagccgagtttgcatggaaattagggtattctgtttgtaaatgtattaaataagtgta 16491924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 696 - 749
Target Start/End: Complemental strand, 41279204 - 41279151
Alignment:
Q  696 agagaaacacggtatagggtttgctatatatagccgagtttacatggaaattag 749  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  41279204 agagaaacacggtttagggtttgctatatatagccgagtttgcatggaaattag 41279151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 805 - 905
Target Start/End: Original strand, 5553753 - 5553851
Alignment:
Q  805 caatagatatatacaaaccaatgacacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctgcattttagagggaatttgt 904  Q
    |||||||||||||||||| | ||| |||||| |||| |||||||||||||||  ||||| ||||||| ||| |||||| |||||||||||| ||||||||    
T  5553753 caatagatatatacaaacga-tgatacaacaagataagaatgaaaaactcatcggtgagtagaaatattaa-ggattgttgcattttagagagaatttgt 5553850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 289 - 333
Target Start/End: Original strand, 22967863 - 22967907
Alignment:
Q  289 ggtgataatccatagtagacaaaataaaacacttcataaaatgta 333  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  22967863 ggtgataatccatagtagacaaaataaaacacttcataaaatgta 22967907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 11650175 - 11650121
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||| ||||    
T  11650175 gtgataattcatagtagacaaaataaaacacttcataaaatgtatgaaatttgaa 11650121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 12140569 - 12140623
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||| |||||||||||||||||||||||||| |||||||| |||||||||    
T  12140569 gtgataatctatagtagacaaaataaaacacttcatgaaatgtatgaaatctgaa 12140623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 16673952 - 16673910
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  16673952 ttgacatacaaataataaaatgcaatatataattggtaacggt 16673910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 17648320 - 17648278
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  17648320 ttgacatacaaataataaaatgcaatatataattggtaacggt 17648278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 30991666 - 30991612
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||    
T  30991666 gtgataatccataatagacaaaataaaacacatcataaaatgtatgaaatctgaa 30991612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 35125499 - 35125445
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||  ||||||||||||||||||||||||||||||||||| |||||||||    
T  35125499 gtgataatttatagtagacaaaataaaacacttcataaaatgtatgaaatctgaa 35125445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 48639116 - 48639170
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||| ||||    
T  48639116 gtgataattcatagtagacaaaataaaacacttcataaaatgtatgaaatatgaa 48639170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 291 - 344
Target Start/End: Complemental strand, 6250438 - 6250385
Alignment:
Q  291 tgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||| |||| ||||||||||||||||||||||||||||||| |||||||||    
T  6250438 tgataattcataatagacaaaataaaacacttcataaaatgtatgaaatctgaa 6250385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 726 - 783
Target Start/End: Complemental strand, 22324850 - 22324793
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| |||||||||||| ||||||||||| |||| ||||||||||||||||    
T  22324850 tagccgagtttgcatggaaattagggtattctgtttgtaaacgtattaaataagtgta 22324793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 882 - 987
Target Start/End: Original strand, 16377619 - 16377727
Alignment:
Q  882 gctgcattttagagggaatttgttgggt-aaattgctgctaacctaatgcagcattttagagggaaattagta-gttaacttgttgc-gatctaataaaa 978  Q
    ||||||||||||| | |||| ||| ||| |||||||||||||||||||||||||||||||||  |||||| || |||||  || ||| || |||||||||    
T  16377619 gctgcattttagatgaaattcgttaggttaaattgctgctaacctaatgcagcattttagagaaaaattattaggttaagatgctgcagacctaataaaa 16377718  T
Q  979 ttaataaat 987  Q
    |||||||||    
T  16377719 ttaataaat 16377727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 805 - 905
Target Start/End: Original strand, 24788667 - 24788765
Alignment:
Q  805 caatagatatatacaaaccaatgacacaacatgataggaatgaaaaactcatgagtgaggagaaataataagggattgctgcattttagagggaatttgt 904  Q
    |||||||||||||||||| | | |||||||| ||||||||||||||  |||| ||||||||||||| || || |||||||||||||| | || |||||||    
T  24788667 caatagatatatacaaacga-taacacaacaggataggaatgaaaagttcatcagtgaggagaaat-attagtgattgctgcatttttgtggaaatttgt 24788764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 170
Target Start/End: Complemental strand, 36653827 - 36653700
Alignment:
Q  42 aaaatatccctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgacttaagtcacgccacgcgagttaactcacg 141  Q
    |||||||||||||| ||||||||||| ||| |||||||  | ||  |||||| |||| | | ||||||||||||||||||||  |  ||||||||||| |    
T  36653827 aaaatatccctgcgttagttaactaacgcatgtgtaaatcaaacgtgacttaatttt-atatatgcgtgacttaagtcacgctgcaagagttaactcatg 36653729  T
Q  142 cacgtgttaatttcagcgtgagttaactc 170  Q
    || ||||||  | ||||||||||||||||    
T  36653728 caggtgttatatccagcgtgagttaactc 36653700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 570 - 685
Target Start/End: Complemental strand, 19222889 - 19222775
Alignment:
Q  570 taccagttaagcagtggtatgagaggaaggttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaatatgtgattcttttgttgtctgtgt 669  Q
    |||||||||||||||||||||||||||| |||| |||| ||| || ||||| |||||||  |   || |||||||||| |||||||| || ||| ||||     
T  19222889 taccagttaagcagtggtatgagaggaaagttgtaaggccacctctttccatttgcaaacttttgaacatcaaaatatatgattcttgtg-tgtatgtga 19222791  T
Q  670 aatttaccaaggttta 685  Q
    ||||||||| ||||||    
T  19222790 aatttaccatggttta 19222775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 294 - 344
Target Start/End: Original strand, 9141094 - 9141144
Alignment:
Q  294 taatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||| |||||||||||||||||||||||||||||||| ||| |||||||||    
T  9141094 taattcatagtagacaaaataaaacacttcataaaatatatgaaatctgaa 9141144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 21128844 - 21128802
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  21128844 ttgacatacgaataataaaatgcaatatataattggtaacggt 21128802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 22325065 - 22325023
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  22325065 ttgacatacgaataataaaatgcaatatataattggtaacggt 22325023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 261
Target Start/End: Original strand, 22967807 - 22967845
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaa 261  Q
    |||||||||||||||||||||||||||||||||||||||    
T  22967807 ttgacatacaaataataaaatgcaatatataattggtaa 22967845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 32277694 - 32277736
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  32277694 ttgacatacgaataataaaatgcaatatataattggtaacggt 32277736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 45418342 - 45418384
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  45418342 ttgacatacaaataataaaatgcaatatataattgataacggt 45418384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 882 - 950
Target Start/End: Original strand, 5553867 - 5553936
Alignment:
Q  882 gctgcattttagagggaatttgttgggt-aaattgctgctaacctaatgcagcattttagagggaaatta 950  Q
    ||||||||||||| | |||||||| ||| |||||| |||||||||||||||| ||||||||| |||||||    
T  5553867 gctgcattttagatgaaatttgttaggttaaattgttgctaacctaatgcagtattttagagagaaatta 5553936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 696 - 749
Target Start/End: Original strand, 16376218 - 16376271
Alignment:
Q  696 agagaaacacggtatagggtttgctatatatagccgagtttacatggaaattag 749  Q
    ||||||||| ||| ||||||||| ||||||||||||||||| ||||||||||||    
T  16376218 agagaaacatggtttagggtttgatatatatagccgagtttgcatggaaattag 16376271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 710 - 783
Target Start/End: Complemental strand, 18487787 - 18487714
Alignment:
Q  710 tagggtttgctatatatagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||| ||| |||||| | || |||||||||||||||||| ||||| ||||| |||| ||||||||||||||||    
T  18487787 tagggcttggtatatacaaccaagtttacatggaaattagagtattttgtttgtaaacgtattaaataagtgta 18487714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 726 - 783
Target Start/End: Complemental strand, 19222700 - 19222643
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| |||||||||| | ||||||||||| |||| ||||||||||||||||    
T  19222700 tagccgagtttgcatggaaattggagtattctgtttgtaaacgtattaaataagtgta 19222643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 696 - 749
Target Start/End: Complemental strand, 26454559 - 26454506
Alignment:
Q  696 agagaaacacggtatagggtttgctatatatagccgagtttacatggaaattag 749  Q
    ||||||||||||| || |||||||||||||||| ||||||| ||||||||||||    
T  26454559 agagaaacacggtttaaggtttgctatatatagtcgagtttgcatggaaattag 26454506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 151
Target Start/End: Complemental strand, 16488232 - 16488169
Alignment:
Q  88 gacttagtttttacacatgcgtgacttaagtcacgccacgcgagttaactcacgcacgtgttaa 151  Q
    ||||||||||||||||||| ||||||||||||||||  |  ||||||| ||||||| |||||||    
T  16488232 gacttagtttttacacatgtgtgacttaagtcacgctgcatgagttaattcacgcaggtgttaa 16488169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 728 - 783
Target Start/End: Original strand, 40686416 - 40686471
Alignment:
Q  728 gccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||| |||| ||||||| ||||||||||| |||| ||||||||||||||||    
T  40686416 gccgagtttgcatgaaaattagggtattctgtttgtaaacgtattaaataagtgta 40686471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 2354085 - 2354127
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| ||||||||||||||||||||||| |||||||||    
T  2354085 ttgacatacgaataataaaatgcaatatataataggtaacggt 2354127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 726 - 783
Target Start/End: Original strand, 2354271 - 2354329
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgttttt-aaatgtattaaataagtgta 783  Q
    ||||||||||| |||| ||||||| ||||||||||||| ||| ||||||||||||||||    
T  2354271 tagccgagtttgcatgaaaattagggtattctgtttttaaaacgtattaaataagtgta 2354329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 888 - 987
Target Start/End: Complemental strand, 4455028 - 4454926
Alignment:
Q  888 ttttagagggaatttgttgggt-aaattgctgctaacctaatgcagcattttagagggaaattagta-gttaacttgttgc-gatctaataaaattaata 984  Q
    ||||||| |||||||||| ||| ||||| ||||||||||||| |||||  || |||||||| || || ||||| ||||||| || |||||||||||||||    
T  4455028 ttttagatggaatttgttaggttaaattactgctaacctaatacagcaaattggagggaaaatattaggttaagttgttgcagacctaataaaattaata 4454929  T
Q  985 aat 987  Q
    |||    
T  4454928 aat 4454926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 4681283 - 4681325
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| ||||||||||||||||||||||| |||||||||    
T  4681283 ttgacatacgaataataaaatgcaatatataataggtaacggt 4681325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 6250496 - 6250454
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    |||||||| ||||||||||||| ||||||||||||||||||||    
T  6250496 ttgacatataaataataaaatgtaatatataattggtaacggt 6250454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 12140513 - 12140555
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    |||||||| |||||||||||||||||||||||| |||||||||    
T  12140513 ttgacatataaataataaaatgcaatatataataggtaacggt 12140555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 22773563 - 22773605
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| ||||||||||||||||||||||| |||||||||    
T  22773563 ttgacatacgaataataaaatgcaatatataataggtaacggt 22773605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 34838303 - 34838261
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| ||||||||||||||||||||||||| |||||||    
T  34838303 ttgacatacgaataataaaatgcaatatataattgataacggt 34838261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 40449408 - 40449450
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| ||||||||||||||||||||||||| |||||||    
T  40449408 ttgacatacgaataataaaatgcaatatataattgataacggt 40449450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 143
Target Start/End: Complemental strand, 42629285 - 42629200
Alignment:
Q  57 tagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgacttaagtcacgccacgcgagttaactcacgca 143  Q
    ||||||||||| ||| |||||||  ||||| |||||| |||| |||||||| |||||||||||||||  |  |||||||||||||||    
T  42629285 tagttaactaacgcatgtgtaaatcatacatgacttaatttt-acacatgcatgacttaagtcacgctgcatgagttaactcacgca 42629200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 726 - 792
Target Start/End: Original strand, 46263804 - 46263870
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgtacaacaactt 792  Q
    ||||| ||||| |||| || |||| ||||| ||||| |||| |||||||||||||||||||||||||    
T  46263804 tagccaagtttgcatgaaacttagggtattttgtttgtaaacgtattaaataagtgtacaacaactt 46263870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 48639061 - 48639103
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    |||||||||||||||||||||| |||||||||||| |||||||    
T  48639061 ttgacatacaaataataaaatgtaatatataattgataacggt 48639103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 726 - 783
Target Start/End: Complemental strand, 9396222 - 9396165
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| |||| ||||||| ||||||| ||| |||| ||||||||||||||||    
T  9396222 tagccgagtttgcatgaaaattagggtattctatttgtaaacgtattaaataagtgta 9396165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 726 - 783
Target Start/End: Original strand, 27712196 - 27712253
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| |||||||||||| ||||| ||||| ||||  |||||||||||||||    
T  27712196 tagccgagtttgcatggaaattagggtattttgtttctaaacatattaaataagtgta 27712253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 116
Target Start/End: Original strand, 42627449 - 42627526
Alignment:
Q  40 cgaaaatatccctgcgctagttaactaaagcaagtgtaaaaaata-caagacttagtttttacacatgcgtgacttaa 116  Q
    ||||||| |||||||| ||||||||||| | |||||||||||  | | | |||||||||||| |||||||||||||||    
T  42627449 cgaaaatgtccctgcgttagttaactaacgtaagtgtaaaaataatctaaacttagtttttatacatgcgtgacttaa 42627526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 726 - 783
Target Start/End: Original strand, 45419143 - 45419200
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| |||| ||||||| ||||| ||||| |||| ||||||||||||||||    
T  45419143 tagccgagtttgcatgaaaattagggtattttgtttgtaaacgtattaaataagtgta 45419200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 265
Target Start/End: Original strand, 16491663 - 16491699
Alignment:
Q  229 tacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||||||||| |||||||||||||||||||||    
T  16491663 tacaaataataaaatacaatatataattggtaacggt 16491699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 599 - 663
Target Start/End: Complemental strand, 18487914 - 18487850
Alignment:
Q  599 gttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaatatgtgattcttttgttgt 663  Q
    ||||||| |||||||| ||||| |||||||  || |||||||||||||| ||||| |||||||||    
T  18487914 gttgcaacgtcacgtctttccatttgcaaagctctaaatatcaaaatatatgatttttttgttgt 18487850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 726 - 778
Target Start/End: Original strand, 24788578 - 24788630
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataa 778  Q
    ||||||||||| |||| ||||||| ||||||||||| |||| |||||||||||    
T  24788578 tagccgagtttgcatgaaaattagggtattctgtttgtaaacgtattaaataa 24788630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 121
Target Start/End: Complemental strand, 31883018 - 31882911
Alignment:
Q  13 caaaacactcgcgcccttcagtgttgtcgaaaatatccctgcgctagttaactaaagcaagtgtaaaaaatacaagacttagtttttacacatgcgtgac 112  Q
    ||||||||||||||||| ||    | || ||||| | ||||| |||||||||||| ||| |||||||| | ||| | |||| |||| |||||||||||||    
T  31883018 caaaacactcgcgccctgcaaccatttcaaaaatgttcctgcactagttaactaacgcatgtgtaaaataaacatgtcttaatttt-acacatgcgtgac 31882920  T
Q  113 ttaagtcac 121  Q
    |||||||||    
T  31882919 ttaagtcac 31882911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 696 - 783
Target Start/End: Complemental strand, 34838146 - 34838060
Alignment:
Q  696 agagaaacacggtatagggtttgctatatatagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| | ||||| ||| ||| |||| || |||||||||||||||||   |||| ||||| |||| ||||||||||||||||    
T  34838146 agagaaacacgtt-tagggcttggtatgtataaccaagtttacatggaaattatgatattttgtttgtaaacgtattaaataagtgta 34838060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 265
Target Start/End: Complemental strand, 35125545 - 35125514
Alignment:
Q  234 ataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||||||||||||||||||||||||||    
T  35125545 ataataaaatgcaatatataattggtaacggt 35125514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 40686200 - 40686239
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaac 262  Q
    ||||||| | ||||||||||||||||||||||||||||||    
T  40686200 ttgacatgcgaataataaaatgcaatatataattggtaac 40686239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 2852872 - 2852914
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| ||||||||||||||||||||||| || ||||||    
T  2852872 ttgacatacgaataataaaatgcaatatataataggcaacggt 2852914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 261
Target Start/End: Original strand, 4680557 - 4680595
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaa 261  Q
    ||||||||| ||||||||||||||||||||||| |||||    
T  4680557 ttgacatacgaataataaaatgcaatatataataggtaa 4680595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 9141033 - 9141075
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| |||||||||||| ||||||||||| ||||||||    
T  9141033 ttgacatacgaataataaaatgaaatatataattagtaacggt 9141075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 21225105 - 21225063
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||  ||||||||| |||||||||||||||||||||||    
T  21225105 ttgacatatgaataataaattgcaatatataattggtaacggt 21225063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 167
Target Start/End: Original strand, 23284777 - 23284815
Alignment:
Q  129 gagttaactcacgcacgtgttaatttcagcgtgagttaa 167  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  23284777 gagttaactcacgcaggtgttaattccagcgtgagttaa 23284815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 81
Target Start/End: Complemental strand, 23311126 - 23311084
Alignment:
Q  39 tcgaaaatatccctgcgctagttaactaaagcaagtgtaaaaa 81  Q
    ||||||||| ||||||| ||||||||||| |||||||||||||    
T  23311126 tcgaaaatacccctgcgttagttaactaacgcaagtgtaaaaa 23311084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 261
Target Start/End: Original strand, 24787399 - 24787437
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaa 261  Q
    |||||||| ||||||||||||||||||||||||| ||||    
T  24787399 ttgacataaaaataataaaatgcaatatataatttgtaa 24787437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 257
Target Start/End: Original strand, 27711981 - 27712015
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattg 257  Q
    ||||||||| |||||||||||||||||||||||||    
T  27711981 ttgacatacgaataataaaatgcaatatataattg 27712015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 30991722 - 30991680
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaacggt 265  Q
    ||||||||| |||||||||||||||||||| || |||||||||    
T  30991722 ttgacatacgaataataaaatgcaatatatgataggtaacggt 30991680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 805 - 851
Target Start/End: Complemental strand, 41279057 - 41279012
Alignment:
Q  805 caatagatatatacaaaccaatgacacaacatgataggaatgaaaaa 851  Q
    ||||||||||||| |||| | ||||||||||||||||||||||||||    
T  41279057 caatagatatatataaacga-tgacacaacatgataggaatgaaaaa 41279012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 170
Target Start/End: Original strand, 8229624 - 8229689
Alignment:
Q  105 tgcgtgacttaagtcacgccacgcgagttaactcacgcacgtgttaatttcagcgtgagttaactc 170  Q
    |||||||||||||||| ||| || || |||| ||||||  |||||||| ||| |||||||||||||    
T  8229624 tgcgtgacttaagtcatgccgcgtgaattaagtcacgctagtgttaatatcaacgtgagttaactc 8229689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 291 - 344
Target Start/End: Original strand, 11642244 - 11642297
Alignment:
Q  291 tgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||| ||||| ||| ||||||||| | |||||||||||||| |||||||||    
T  11642244 tgataattcatagaagataaaataaaagatttcataaaatgtatgaaatctgaa 11642297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 726 - 783
Target Start/End: Complemental strand, 16672108 - 16672051
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    |||||||||||  ||||||||||| ||||| ||||| ||||  |||||||||||||||    
T  16672108 tagccgagtttgtatggaaattagggtattatgtttgtaaacatattaaataagtgta 16672051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 726 - 783
Target Start/End: Complemental strand, 17646476 - 17646419
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    |||||||||||  ||||||||||| ||||| ||||| ||||  |||||||||||||||    
T  17646476 tagccgagtttgtatggaaattagggtattatgtttgtaaacatattaaataagtgta 17646419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 696 - 749
Target Start/End: Complemental strand, 21128686 - 21128634
Alignment:
Q  696 agagaaacacggtatagggtttgctatatatagccgagtttacatggaaattag 749  Q
    ||||||||||| | ||||||||| |||||||| || ||||||||||||||||||    
T  21128686 agagaaacacgtt-tagggtttggtatatataaccaagtttacatggaaattag 21128634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #98
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 599 - 668
Target Start/End: Complemental strand, 21225051 - 21224982
Alignment:
Q  599 gttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaatatgtgattcttttgttgtctgtg 668  Q
    |||| ||||||||||| ||||| |||||||  || |||||||||||||| ||||| || |||||| ||||    
T  21225051 gttgtaaggtcacgtctttccatttgcaaatctctaaatatcaaaatatatgatttttgtgttgtgtgtg 21224982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #99
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 884 - 940
Target Start/End: Original strand, 24788783 - 24788840
Alignment:
Q  884 tgcattttagagggaatttgttgggt-aaattgctgctaacctaatgcagcattttag 940  Q
    ||||||||||| |||||||||| ||| |||||| ||| ||| ||||||||||||||||    
T  24788783 tgcattttagatggaatttgttaggttaaattgttgccaacttaatgcagcattttag 24788840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #100
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 726 - 783
Target Start/End: Complemental strand, 28170449 - 28170392
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| |||| ||  ||| ||||||||||| |||| ||||||||||||||||    
T  28170449 tagccgagtttgcatgaaatctagggtattctgtttgtaaacgtattaaataagtgta 28170392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #101
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 175
Target Start/End: Complemental strand, 34328681 - 34328636
Alignment:
Q  130 agttaactcacgcacgtgttaatttcagcgtgagttaactcccgca 175  Q
    ||||||||||| || ||||||||| |||||||||||||||| ||||    
T  34328681 agttaactcacacaagtgttaattccagcgtgagttaactcacgca 34328636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #102
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 79
Target Start/End: Original strand, 40143877 - 40143914
Alignment:
Q  42 aaaatatccctgcgctagttaactaaagcaagtgtaaa 79  Q
    |||||||||||||||||||||||||  |||||||||||    
T  40143877 aaaatatccctgcgctagttaactagcgcaagtgtaaa 40143914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #103
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 696 - 749
Target Start/End: Complemental strand, 41279303 - 41279250
Alignment:
Q  696 agagaaacacggtatagggtttgctatatatagccgagtttacatggaaattag 749  Q
    ||||||||||||| |||||||||| ||||| || ||||||| |||| |||||||    
T  41279303 agagaaacacggtttagggtttgcgatataaagtcgagtttgcatgaaaattag 41279250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #104
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 726 - 783
Target Start/End: Original strand, 48640546 - 48640603
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| |||| ||||||   |||||| ||| |||||||||||||||||||||    
T  48640546 tagccgagtttgcatgaaaattatgatattctatttgtaaatgtattaaataagtgta 48640603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 49; Significance: 2e-18; HSPs: 4)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 570 - 678
Target Start/End: Complemental strand, 103148 - 103040
Alignment:
Q  570 taccagttaagcagtggtatgagaggaaggttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaatatgtgattcttttgttgtctgtgt 669  Q
    ||||| |||| ||||||||||| ||||  |||| ||||||||||| ||||| |||||||  || |||||||||||||| |||||||| |||||| ||||     
T  103148 taccaattaaacagtggtatgataggagagttgtaaggtcacgtctttccatttgcaaacctctaaatatcaaaatatatgattcttgtgttgtgtgtga 103049  T
Q  670 aatttacca 678  Q
    |||||||||    
T  103048 aatttacca 103040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 127615 - 127561
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||| |||||| ||||| |||||||||||||||||||||| |||| ||||    
T  127615 gtgataatctatagtacacaaagtaaaacacttcataaaatgtatgaaatatgaa 127561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #3
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 726 - 783
Target Start/End: Complemental strand, 103004 - 102947
Alignment:
Q  726 tagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    ||||||||||| |||| ||||||| ||||||||||| |||| |||||||||| |||||    
T  103004 tagccgagtttgcatgaaaattagggtattctgtttgtaaacgtattaaatacgtgta 102947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #4
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 344
Target Start/End: Complemental strand, 104963 - 104912
Alignment:
Q  293 ataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||||||| ||||||| ||| |||||||||| |||| ||||    
T  104963 ataatccatagtagacaaagtaaaacaattcttaaaatgtatgaaatgtgaa 104912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 48; Significance: 7e-18; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 290 - 341
Target Start/End: Original strand, 1434 - 1485
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatct 341  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1434 gtgataatccatagtagacaaaataaaacacttcataaaatgtatgaaatct 1485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 48; Significance: 7e-18; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 185393 - 185464
Alignment:
Q  9 aacacaaaacactcgcgcccttcagtgttgtcgaaaatatccctgcgctagttaactaaagcaagtgtaaaa 80  Q
    ||||||||||||||||||||| |||||||| |||||||  ||||||| ||||||||||| ||||||||||||    
T  185393 aacacaaaacactcgcgccctacagtgttgccgaaaatgcccctgcgttagttaactaacgcaagtgtaaaa 185464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 725 - 786
Target Start/End: Original strand, 196270 - 196331
Alignment:
Q  725 atagccgagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgtacaa 786  Q
    ||||||||||||||||| ||||||| ||||| ||||| |||| |||||||||||||||||||    
T  196270 atagccgagtttacatgaaaattagggtattatgtttgtaaacgtattaaataagtgtacaa 196331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 163485 - 163540
Alignment:
Q  290 gtgataat-ccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  163485 gtgataataccatagtagacaaaataaaacacttcataaaatgtatgaaatctgaa 163540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1155 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold1155
Description:

Target: scaffold1155; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 581 - 635
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||    
T  581 gtgataatccatagtagtcaaaataaaacacttcaaaaaatgtatgaaatctgaa 635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 9636 - 9582
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||    
T  9636 gtgataatccatagtagtcaaaataaaacacttcaaaaaatgtatgaaatctgaa 9582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 14291 - 14345
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| |||||||||    
T  14291 gtgataatacatagtagacaaaattaaacacttcataaaatgtatgaaatctgaa 14345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 29344 - 29398
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||    
T  29344 gtgataatccatagtagtcaaaataaaacacttcaaaaaatgtatgaaatctgaa 29398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1107 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1107
Description:

Target: scaffold1107; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 2025 - 1921
Alignment:
Q  40 cgaaaatatccctgcgctagttaactaaagcaagtgtaaaaaata--caagacttagtttttacacatgcgtgacttaagtcacgccacgcgagttaact 137  Q
    |||||||| ||||| |  |||||||| | |||||||||||||| |  || ||||||||||||||| |||||||||||||||||||   || |||||||||    
T  2025 cgaaaatacccctgtgtaagttaactcacgcaagtgtaaaaaaaaaacatgacttagtttttacagatgcgtgacttaagtcacgttgcgtgagttaact 1926  T
Q  138 cacgc 142  Q
    |||||    
T  1925 cacgc 1921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 36155 - 36206
Alignment:
Q  129 gagttaactcacgcacgtgttaatttcagcgtgagttaactcccgcagcgtg 180  Q
    ||||||||||||||||||||||||| |||||||||||| ||| |||||||||    
T  36155 gagttaactcacgcacgtgttaattccagcgtgagttagctcacgcagcgtg 36206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 38; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 290 - 339
Target Start/End: Complemental strand, 13647 - 13598
Alignment:
Q  290 gtgataatccatagtagacaaaataaaacacttcataaaatgtataaaat 339  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| ||||    
T  13647 gtgatactccatagtagacaaaataaaacatttcataaaatgtatgaaat 13598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 882 - 987
Target Start/End: Original strand, 331 - 439
Alignment:
Q  882 gctgcattttagagggaatttgttgggt-aaattgctgctaacctaatgcagcattttagagggaaattagta-gttaacttgttgc-gatctaataaaa 978  Q
    ||||||||||| | | |||||||| ||| |||||||||||||||||||| ||||||||| || ||||||| || | ||| | ||||| ||||| ||||||    
T  331 gctgcattttatatgaaatttgttaggttaaattgctgctaacctaatgtagcattttatagagaaattattaggctaagtggttgcagatctgataaaa 430  T
Q  979 ttaataaat 987  Q
    |||||||||    
T  431 ttaataaat 439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 139
Target Start/End: Complemental strand, 16085 - 15985
Alignment:
Q  40 cgaaaatatccctgcgctagttaactaaagcaagtgtaaaaaata-caagacttagtttttacacatgcgtgacttaagtcacgccacgcgagttaactc 138  Q
    |||||||| |||||||  |||||||| | |||||||||||||| | |  ||||||||||||||| |||||||||||||| ||||   || ||||||||||    
T  16085 cgaaaatacccctgcgtgagttaactcacgcaagtgtaaaaaaaaacgtgacttagtttttacagatgcgtgacttaagccacgttgcgtgagttaactc 15986  T
Q  139 a 139  Q
    |    
T  15985 a 15985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 36; Significance: 0.0000000001; HSPs: 4)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 262
Target Start/End: Complemental strand, 13479 - 13440
Alignment:
Q  223 ttgacatacaaataataaaatgcaatatataattggtaac 262  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  13479 ttgacatacgaataataaaatgcaatatataattggtaac 13440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 731 - 783
Target Start/End: Complemental strand, 13256 - 13204
Alignment:
Q  731 gagtttacatggaaattagtgtattctgtttttaaatgtattaaataagtgta 783  Q
    |||||| |||| ||||||| ||||||||||| |||| ||||||||||||||||    
T  13256 gagtttgcatgaaaattagggtattctgtttgtaaacgtattaaataagtgta 13204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #3
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 599 - 674
Target Start/End: Complemental strand, 13426 - 13351
Alignment:
Q  599 gttgcaaggtcacgtccttccaattgcaaaaatcaaaatatcaaaatatgtgattcttttgttgtctgtgtaattt 674  Q
    |||| ||||||||||| ||||| |||||||  || |||||||||||||| ||||| || |||||| |||| |||||    
T  13426 gttgtaaggtcacgtctttccatttgcaaagctctaaatatcaaaatatatgatttttgtgttgtgtgtgaaattt 13351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #4
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 696 - 754
Target Start/End: Complemental strand, 13316 - 13259
Alignment:
Q  696 agagaaacacggtatagggtttgctatatatagccgagtttacatggaaattagtgtat 754  Q
    ||||||||||| ||||||| ||| |||||||| || |||||||||||||||||| ||||    
T  13316 agagaaacacg-tatagggcttggtatatataaccaagtttacatggaaattagggtat 13259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 344
Target Start/End: Original strand, 71102 - 71153
Alignment:
Q  293 ataatccatagtagacaaaataaaacacttcataaaatgtataaaatctgaa 344  Q
    ||||||||||||||||||| ||||||||||| |||||||||| |||| ||||    
T  71102 ataatccatagtagacaaagtaaaacacttcttaaaatgtatgaaatgtgaa 71153  T

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Target: scaffold0294 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 604 - 674
Target Start/End: Original strand, 12234 - 12304
Alignment:
Q  604 aaggtcacgtccttccaattgcaaaaatcaaaatatcaaaatatgtgattcttttgttgtctgtgtaattt 674  Q
    ||||||||||| ||||| |||||||  || |||||||||||||| ||||| || |||||| |||| |||||    
T  12234 aaggtcacgtctttccatttgcaaagctcgaaatatcaaaatatatgatttttgtgttgtgtgtgaaattt 12304  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 141
Target Start/End: Complemental strand, 232427 - 232390
Alignment:
Q  104 atgcgtgacttaagtcacgccacgcgagttaactcacg 141  Q
    ||||||||||||||||||||| || |||||||||||||    
T  232427 atgcgtgacttaagtcacgccgcgtgagttaactcacg 232390  T

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