View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4818_low_1 (Length: 537)
Name: NF4818_low_1
Description: NF4818
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4818_low_1 |
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Alignment Details
Target: chr7 (Bit Score: 426; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 426; E-Value: 0
Query Start/End: Original strand, 1 - 518
Target Start/End: Original strand, 35829234 - 35829754
Alignment:
| Q |
1 |
agacacaatcgaaagaggtactcacatttaatttccggtacactttggatatgattactccggcgcgaatggaacttgtggggnnnnnnnn--ttatttt |
98 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||||| |
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| T |
35829234 |
agacacaatcgaaagaggtactgacatttaatttccggtacattttggatatgattactccggcgcgaatggaacttatgggaaaaataataattatttt |
35829333 |
T |
|
| Q |
99 |
acttgtactttgtttctatgaccaatatacacatgatgaaaaatttgttaccataacaaggtgcatcaaacacacctcaaggacacctccatcagactat |
198 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35829334 |
acttgtactttgtatctatgaccaatatacacatgatgaaaaatttgttaccattacaaggtgcatcaaacacacctcaaggacacctccatcagactat |
35829433 |
T |
|
| Q |
199 |
caggtttgcctataaaaggtggtgacctcttcaaattgtcttctcaacttttcatttgcatcaaacatttccttatagcagaacagtattcaaccccctc |
298 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35829434 |
caggtttgcctataaaaggtggtgacctcttcaaattgtcttctcaacttttcatttgcatcaaacatttccttatagcagaacagtattcaaccccctc |
35829533 |
T |
|
| Q |
299 |
tcttattaagcaatttttataagaag-nnnnnnnntcatggttttaaaacttgttagtttctcaaaacatgtcatattttcatttaccaaaaccattata |
397 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35829534 |
tcttattaagcaatttttataagaagaaaaaaaaatcatggttttaaaacttgttagtttctcaaaacatgtcatattttcatttaccaaaaccattata |
35829633 |
T |
|
| Q |
398 |
attctaatccttagttttatactttacaaagctgactcaggctgcaacaattctattacaacttcattagttcaaattccaccctatgatgttatcatat |
497 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
35829634 |
attctaatccttagttttatactttacaaagctgactcaggctgcaacaattctattacaacttcattagttcaaatttcaccctatgatgttatcatat |
35829733 |
T |
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| Q |
498 |
cactacaatcacaatcctttg |
518 |
Q |
| |
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||||||||||||||||||||| |
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| T |
35829734 |
cactacaatcacaatcctttg |
35829754 |
T |
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