View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4819-Insertion-5 (Length: 383)
Name: NF4819-Insertion-5
Description: NF4819
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4819-Insertion-5 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 352; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 8 - 383
Target Start/End: Original strand, 23699190 - 23699565
Alignment:
| Q |
8 |
gtcttgacaacacaagtcccaaaagctctcataaaaagcggaactgagtctattcggccccattgctttatctgaattcatgctatacaatgcttctcta |
107 |
Q |
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| T |
23699190 |
gtcttgacaacacaagtcccaaaagctcttataaaaagcggaactgagtctattcggccccagtgctttatccgaattcatgctatacaatgcttctcta |
23699289 |
T |
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| Q |
108 |
aattcttcaatcaaatattcattggtcagcttatcatcttccttctatgtgactctggctgatatgcgttgtagcttgatgatgtgtgctttcagcttgt |
207 |
Q |
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| T |
23699290 |
aattcttcaatcaaatattcattggtcagcttatcatcttccttctatgtgactctggctgatatgcgttgtagcttgatgatgtgtgctttcagcttgt |
23699389 |
T |
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| Q |
208 |
tgaaataagtccacaaaatagtcctttgaaactttacatatgccctcctgctcttgtattacaattccatcagaattgcacagttttacaatctgatttc |
307 |
Q |
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| T |
23699390 |
tgaaataagtccacaaaatagtcctttgaaactttacatatgccctcctgctcttggattacaattccatcagaattgcacagttttacaatctgatttc |
23699489 |
T |
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| Q |
308 |
atttctttcttgaggttgctaccacaaaggaaaaatttatatttgggtcaacatctcatagctaatgcgccttttc |
383 |
Q |
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| T |
23699490 |
atttctttcttgaggttgctaccacaaaggaaaaatttatatttgagtcaacatctcgtagctaatgcgccttttc |
23699565 |
T |
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