View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4819_low_6 (Length: 207)

Name: NF4819_low_6
Description: NF4819
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4819_low_6
NF4819_low_6
[»] chr5 (59 HSPs)
chr5 (1-203)||(14183967-14184167)
chr5 (1-103)||(17699322-17699424)
chr5 (1-80)||(6173020-6173099)
chr5 (1-128)||(25108562-25108690)
chr5 (1-128)||(25111139-25111267)
chr5 (1-128)||(25167654-25167782)
chr5 (1-128)||(25170230-25170358)
chr5 (8-78)||(17741212-17741285)
chr5 (1-104)||(20189881-20189984)
chr5 (2-105)||(36006907-36007010)
chr5 (9-150)||(10044665-10044807)
chr5 (9-176)||(35988631-35988796)
chr5 (2-98)||(39183649-39183745)
chr5 (3-78)||(19889575-19889650)
chr5 (1-80)||(31956719-31956798)
chr5 (1-80)||(41268327-41268406)
chr5 (18-150)||(25344709-25344840)
chr5 (2-95)||(15898181-15898274)
chr5 (2-75)||(34534912-34534985)
chr5 (1-78)||(42818893-42818969)
chr5 (8-103)||(39212567-39212663)
chr5 (9-175)||(4439152-4439317)
chr5 (1-150)||(5357786-5357936)
chr5 (9-58)||(13422414-13422463)
chr5 (2-78)||(5072940-5073016)
chr5 (11-150)||(11099446-11099586)
chr5 (11-98)||(6610836-6610923)
chr5 (2-77)||(17242997-17243072)
chr5 (1-150)||(3725175-3725325)
chr5 (20-78)||(13087783-13087841)
chr5 (20-78)||(15564930-15564988)
chr5 (1-142)||(16926068-16926208)
chr5 (11-77)||(33988199-33988265)
chr5 (1-103)||(35585633-35585735)
chr5 (1-87)||(38978893-38978979)
chr5 (2-80)||(42158686-42158764)
chr5 (11-100)||(4044497-4044586)
chr5 (20-77)||(36446730-36446787)
chr5 (9-78)||(43525475-43525544)
chr5 (11-103)||(7613706-7613798)
chr5 (11-103)||(8369713-8369805)
chr5 (9-77)||(15254762-15254830)
chr5 (1-77)||(35334569-35334645)
chr5 (9-77)||(36469137-36469205)
chr5 (4-103)||(43572997-43573097)
chr5 (33-80)||(7311220-7311267)
chr5 (20-78)||(13016405-13016463)
chr5 (9-79)||(16883972-16884042)
chr5 (42-80)||(22398309-22398347)
chr5 (1-78)||(72147-72224)
chr5 (11-80)||(858334-858403)
chr5 (42-79)||(32659846-32659883)
chr5 (9-78)||(39060996-39061065)
chr5 (1-73)||(14259656-14259728)
chr5 (33-77)||(16283630-16283674)
chr5 (1-77)||(25814353-25814429)
chr5 (9-77)||(32539659-32539727)
chr5 (1-77)||(39008118-39008193)
chr5 (1-77)||(42575681-42575757)
[»] chr3 (49 HSPs)
chr3 (3-141)||(41287253-41287392)
chr3 (2-103)||(3862188-3862289)
chr3 (1-193)||(44218962-44219151)
chr3 (1-132)||(53051015-53051147)
chr3 (1-161)||(9218134-9218292)
chr3 (1-161)||(39329710-39329868)
chr3 (1-132)||(32977776-32977908)
chr3 (1-78)||(47496158-47496235)
chr3 (1-150)||(48409573-48409725)
chr3 (4-150)||(38600774-38600921)
chr3 (11-150)||(1334749-1334889)
chr3 (9-138)||(30261482-30261612)
chr3 (1-78)||(46194247-46194324)
chr3 (1-150)||(33994646-33994796)
chr3 (1-104)||(29858880-29858983)
chr3 (1-104)||(32023116-32023219)
chr3 (1-75)||(50150411-50150485)
chr3 (1-78)||(1923079-1923156)
chr3 (1-74)||(17777039-17777112)
chr3 (1-74)||(19078340-19078413)
chr3 (2-129)||(5245402-5245530)
chr3 (46-132)||(51164986-51165073)
chr3 (11-77)||(53876478-53876544)
chr3 (1-78)||(21585451-21585528)
chr3 (33-78)||(35300658-35300703)
chr3 (42-103)||(46627941-46628002)
chr3 (44-133)||(53583546-53583635)
chr3 (1-78)||(53754105-53754182)
chr3 (11-80)||(54458348-54458417)
chr3 (1-77)||(21296545-21296621)
chr3 (23-79)||(29807125-29807181)
chr3 (2-74)||(34081100-34081172)
chr3 (11-150)||(39866521-39866661)
chr3 (44-104)||(48744291-48744351)
chr3 (1-77)||(52325166-52325242)
chr3 (21-147)||(9017810-9017937)
chr3 (9-80)||(27668366-27668437)
chr3 (122-193)||(39144770-39144840)
chr3 (11-77)||(49003269-49003335)
chr3 (15-72)||(7885746-7885803)
chr3 (1-74)||(45746355-45746428)
chr3 (1-77)||(15280594-15280670)
chr3 (1-77)||(26134745-26134821)
chr3 (12-80)||(29361610-29361677)
chr3 (1-77)||(37041915-37041991)
chr3 (1-73)||(41031561-41031633)
chr3 (11-103)||(43639532-43639624)
chr3 (41-105)||(47165208-47165272)
chr3 (149-193)||(47684876-47684920)
[»] chr2 (63 HSPs)
chr2 (2-141)||(31592540-31592679)
chr2 (2-147)||(2048282-2048428)
chr2 (1-99)||(14384298-14384396)
chr2 (1-150)||(24356100-24356250)
chr2 (1-78)||(7931537-7931614)
chr2 (9-149)||(8550611-8550752)
chr2 (1-105)||(9472411-9472515)
chr2 (8-147)||(7420849-7420988)
chr2 (8-103)||(44024714-44024809)
chr2 (1-103)||(16864951-16865052)
chr2 (1-75)||(18460477-18460551)
chr2 (1-78)||(1908535-1908612)
chr2 (1-78)||(28844048-28844125)
chr2 (1-150)||(10069553-10069703)
chr2 (9-122)||(6723857-6723969)
chr2 (8-100)||(3487390-3487482)
chr2 (1-133)||(19515870-19516001)
chr2 (1-141)||(25604350-25604489)
chr2 (1-150)||(28108343-28108493)
chr2 (2-98)||(39095621-39095717)
chr2 (2-78)||(39166737-39166813)
chr2 (11-77)||(13375231-13375298)
chr2 (1-150)||(43182263-43182411)
chr2 (8-103)||(44424279-44424374)
chr2 (1-79)||(4794562-4794640)
chr2 (2-80)||(26273749-26273827)
chr2 (9-78)||(3199895-3199964)
chr2 (1-129)||(11726711-11726840)
chr2 (1-78)||(37529112-37529189)
chr2 (8-80)||(2756670-2756742)
chr2 (40-100)||(4283038-4283098)
chr2 (11-150)||(7213474-7213614)
chr2 (1-77)||(28301423-28301499)
chr2 (1-77)||(37247926-37248002)
chr2 (1-104)||(734027-734129)
chr2 (1-80)||(6213889-6213968)
chr2 (1-150)||(10818610-10818761)
chr2 (33-140)||(40710598-40710705)
chr2 (8-78)||(6972581-6972651)
chr2 (1-150)||(18181181-18181331)
chr2 (11-77)||(23684958-23685024)
chr2 (45-79)||(43056408-43056442)
chr2 (1-75)||(43077770-43077844)
chr2 (1-78)||(13222057-13222134)
chr2 (11-104)||(41436078-41436171)
chr2 (5-78)||(43427127-43427200)
chr2 (13-77)||(435120-435184)
chr2 (1-65)||(6075487-6075551)
chr2 (3-103)||(8385066-8385166)
chr2 (1-150)||(28925816-28925966)
chr2 (45-100)||(9724911-9724966)
chr2 (45-80)||(9912472-9912507)
chr2 (1-80)||(37028747-37028826)
chr2 (44-141)||(314459-314557)
chr2 (1-75)||(2427349-2427423)
chr2 (1-103)||(7649991-7650093)
chr2 (1-55)||(33602293-33602347)
chr2 (2-68)||(33880148-33880214)
chr2 (33-150)||(36748169-36748287)
chr2 (1-58)||(44736708-44736765)
chr2 (2-74)||(7648911-7648983)
chr2 (11-103)||(8031740-8031832)
chr2 (33-77)||(13538311-13538355)
[»] chr4 (73 HSPs)
chr4 (1-105)||(55360362-55360466)
chr4 (1-104)||(22872403-22872506)
chr4 (9-150)||(49448838-49448980)
chr4 (1-78)||(32949890-32949967)
chr4 (8-180)||(29990411-29990583)
chr4 (1-105)||(38160166-38160270)
chr4 (2-78)||(47277723-47277799)
chr4 (20-100)||(48400650-48400730)
chr4 (1-181)||(5499372-5499547)
chr4 (1-104)||(27977136-27977239)
chr4 (1-132)||(25149440-25149573)
chr4 (2-150)||(29550695-29550844)
chr4 (1-78)||(38319900-38319977)
chr4 (1-77)||(29644344-29644420)
chr4 (1-105)||(39052915-39053019)
chr4 (1-132)||(44633146-44633277)
chr4 (1-78)||(4354437-4354514)
chr4 (1-78)||(10099766-10099843)
chr4 (1-78)||(36047141-36047218)
chr4 (1-78)||(49218823-49218900)
chr4 (1-78)||(54217331-54217408)
chr4 (2-78)||(35998158-35998234)
chr4 (11-103)||(37309697-37309789)
chr4 (18-77)||(30568665-30568724)
chr4 (1-95)||(42132802-42132896)
chr4 (1-78)||(3505711-3505788)
chr4 (11-104)||(3686010-3686103)
chr4 (1-78)||(8759768-8759845)
chr4 (9-78)||(11583912-11583981)
chr4 (1-78)||(22020551-22020628)
chr4 (8-150)||(49401652-49401795)
chr4 (33-98)||(52677052-52677117)
chr4 (11-75)||(1825292-1825356)
chr4 (1-77)||(41710186-41710262)
chr4 (1-80)||(9052089-9052168)
chr4 (9-175)||(13529859-13530023)
chr4 (14-105)||(21954444-21954535)
chr4 (9-104)||(37786958-37787053)
chr4 (1-150)||(4360376-4360526)
chr4 (1-103)||(18849775-18849877)
chr4 (9-67)||(32323661-32323719)
chr4 (1-99)||(42051676-42051774)
chr4 (1-161)||(54729440-54729601)
chr4 (1-58)||(4357557-4357614)
chr4 (12-65)||(18509446-18509499)
chr4 (1-77)||(34021024-34021102)
chr4 (1-58)||(42185857-42185914)
chr4 (1-78)||(46958711-46958788)
chr4 (33-78)||(53848667-53848712)
chr4 (1-77)||(17237032-17237108)
chr4 (7-79)||(25250633-25250705)
chr4 (2-78)||(37315963-37316039)
chr4 (1-77)||(38976980-38977056)
chr4 (1-77)||(39258314-39258390)
chr4 (1-77)||(41436470-41436546)
chr4 (1-77)||(51527408-51527483)
chr4 (9-77)||(51572270-51572338)
chr4 (1-143)||(29136764-29136907)
chr4 (2-77)||(47846889-47846964)
chr4 (48-78)||(13719811-13719841)
chr4 (11-77)||(26799258-26799324)
chr4 (1-150)||(28279826-28279976)
chr4 (40-78)||(33093500-33093538)
chr4 (11-77)||(39979779-39979845)
chr4 (11-77)||(42544208-42544274)
chr4 (1-78)||(51076452-51076532)
chr4 (47-80)||(25125115-25125148)
chr4 (1-78)||(28330783-28330860)
chr4 (42-103)||(50328087-50328148)
chr4 (1-73)||(42024247-42024319)
chr4 (8-72)||(43335070-43335134)
chr4 (1-77)||(48740509-48740585)
chr4 (1-77)||(49812218-49812294)
[»] chr7 (57 HSPs)
chr7 (1-150)||(2849244-2849394)
chr7 (1-133)||(28333160-28333292)
chr7 (1-133)||(34064204-34064336)
chr7 (1-103)||(14648935-14649037)
chr7 (4-161)||(43007886-43008043)
chr7 (1-78)||(37496438-37496515)
chr7 (1-105)||(27337887-27337991)
chr7 (1-161)||(32775972-32776131)
chr7 (1-78)||(3667918-3667995)
chr7 (1-78)||(5068339-5068416)
chr7 (1-78)||(30462649-30462726)
chr7 (33-150)||(45218126-45218244)
chr7 (3-80)||(6591580-6591657)
chr7 (9-103)||(37264310-37264404)
chr7 (1-78)||(38589723-38589800)
chr7 (11-103)||(2842068-2842160)
chr7 (6-78)||(24288417-24288489)
chr7 (8-150)||(36070101-36070244)
chr7 (3-78)||(39343712-39343787)
chr7 (1-80)||(39498663-39498742)
chr7 (1-170)||(8149948-8150115)
chr7 (1-105)||(18731431-18731532)
chr7 (2-80)||(27242769-27242847)
chr7 (1-75)||(36117650-36117724)
chr7 (1-78)||(10355776-10355853)
chr7 (1-98)||(17266016-17266113)
chr7 (1-78)||(25778733-25778810)
chr7 (11-104)||(28923244-28923337)
chr7 (1-133)||(30659465-30659598)
chr7 (1-129)||(31581432-31581561)
chr7 (1-65)||(1101997-1102061)
chr7 (1-77)||(29257536-29257612)
chr7 (2-78)||(30459052-30459128)
chr7 (1-150)||(30463005-30463155)
chr7 (1-77)||(34963853-34963929)
chr7 (9-175)||(9658835-9658999)
chr7 (1-104)||(27234492-27234595)
chr7 (45-103)||(19687992-19688050)
chr7 (1-78)||(9602850-9602927)
chr7 (1-78)||(9830421-9830498)
chr7 (1-65)||(1099140-1099204)
chr7 (46-150)||(5724676-5724780)
chr7 (42-78)||(21412077-21412113)
chr7 (1-77)||(33584552-33584628)
chr7 (31-103)||(39171157-39171229)
chr7 (1-77)||(46288473-46288549)
chr7 (1-147)||(32971989-32972136)
chr7 (8-80)||(3781220-3781289)
chr7 (40-78)||(6838090-6838128)
chr7 (20-78)||(11726789-11726847)
chr7 (11-141)||(33774021-33774151)
chr7 (14-80)||(34001898-34001964)
chr7 (11-77)||(37157169-37157235)
chr7 (1-129)||(23703905-23704034)
chr7 (1-74)||(39143892-39143965)
chr7 (2-78)||(29997070-29997146)
chr7 (1-65)||(45890891-45890955)
[»] chr8 (66 HSPs)
chr8 (1-161)||(2195457-2195615)
chr8 (1-132)||(28791297-28791429)
chr8 (1-104)||(8418317-8418420)
chr8 (1-150)||(14117451-14117601)
chr8 (1-150)||(42412351-42412501)
chr8 (7-80)||(1230401-1230474)
chr8 (1-105)||(40077764-40077868)
chr8 (1-105)||(41726510-41726614)
chr8 (1-139)||(2797029-2797167)
chr8 (2-103)||(7258383-7258484)
chr8 (12-78)||(11637140-11637206)
chr8 (1-103)||(27868341-27868443)
chr8 (1-150)||(28802756-28802906)
chr8 (8-78)||(29638297-29638367)
chr8 (11-73)||(44615411-44615473)
chr8 (1-129)||(7755048-7755177)
chr8 (1-77)||(4274341-4274417)
chr8 (2-78)||(32679025-32679101)
chr8 (1-157)||(43844846-43845000)
chr8 (1-128)||(29451338-29451465)
chr8 (10-80)||(15559169-15559239)
chr8 (13-103)||(18725910-18726000)
chr8 (1-78)||(2875127-2875204)
chr8 (33-78)||(5878267-5878312)
chr8 (1-78)||(8618117-8618194)
chr8 (1-78)||(14689949-14690026)
chr8 (1-78)||(14748747-14748824)
chr8 (33-78)||(23764987-23765032)
chr8 (1-78)||(33826220-33826297)
chr8 (1-104)||(5392038-5392141)
chr8 (9-80)||(27987655-27987726)
chr8 (9-80)||(28044957-28045028)
chr8 (11-129)||(39171542-39171661)
chr8 (40-150)||(39998191-39998302)
chr8 (9-104)||(45197608-45197703)
chr8 (1-103)||(32241440-32241542)
chr8 (40-105)||(325130-325195)
chr8 (1-78)||(886489-886566)
chr8 (11-104)||(5962488-5962581)
chr8 (1-78)||(38201432-38201509)
chr8 (1-58)||(40316638-40316695)
chr8 (2-78)||(10728963-10729039)
chr8 (2-78)||(25174626-25174702)
chr8 (2-73)||(12653677-12653748)
chr8 (9-78)||(17005945-17006011)
chr8 (9-78)||(17571237-17571303)
chr8 (8-103)||(27973702-27973797)
chr8 (8-103)||(28030971-28031066)
chr8 (9-80)||(29567202-29567273)
chr8 (2-150)||(44790390-44790539)
chr8 (8-79)||(45537412-45537483)
chr8 (1-80)||(26677058-26677141)
chr8 (9-79)||(27875182-27875252)
chr8 (1-75)||(29615787-29615861)
chr8 (12-129)||(31410597-31410715)
chr8 (1-71)||(32231768-32231838)
chr8 (11-77)||(32967319-32967385)
chr8 (3-80)||(36649755-36649833)
chr8 (1-103)||(41759646-41759748)
chr8 (1-88)||(44975778-44975867)
chr8 (11-80)||(2119715-2119784)
chr8 (1-98)||(3442472-3442569)
chr8 (1-78)||(15020661-15020738)
chr8 (2-77)||(3384521-3384599)
chr8 (1-77)||(22490380-22490456)
chr8 (1-73)||(33925130-33925202)
[»] scaffold0685 (1 HSPs)
scaffold0685 (1-101)||(6418-6518)
[»] chr1 (83 HSPs)
chr1 (1-101)||(52382405-52382505)
chr1 (1-131)||(3718837-3718968)
chr1 (1-133)||(19348982-19349113)
chr1 (1-150)||(27209936-27210086)
chr1 (9-103)||(45305850-45305944)
chr1 (1-132)||(12267618-12267750)
chr1 (1-103)||(29225742-29225844)
chr1 (1-78)||(705391-705468)
chr1 (1-78)||(31798407-31798484)
chr1 (1-150)||(50267407-50267557)
chr1 (1-80)||(30903267-30903346)
chr1 (1-150)||(36232758-36232908)
chr1 (1-78)||(2886160-2886237)
chr1 (8-105)||(14352562-14352659)
chr1 (1-78)||(24131442-24131519)
chr1 (11-104)||(32587764-32587857)
chr1 (10-79)||(34877131-34877200)
chr1 (1-78)||(37925288-37925365)
chr1 (1-105)||(5115840-5115944)
chr1 (1-69)||(20988533-20988601)
chr1 (1-80)||(10587621-10587700)
chr1 (1-68)||(16451620-16451687)
chr1 (1-68)||(16460773-16460840)
chr1 (14-105)||(21304821-21304912)
chr1 (9-80)||(40061806-40061877)
chr1 (5-108)||(46363423-46363526)
chr1 (1-80)||(51749223-51749302)
chr1 (1-150)||(4466123-4466273)
chr1 (1-150)||(11425838-11425988)
chr1 (9-79)||(25842596-25842666)
chr1 (2-103)||(27831835-27831937)
chr1 (1-98)||(7785296-7785393)
chr1 (5-78)||(26583721-26583794)
chr1 (1-78)||(29756184-29756261)
chr1 (2-150)||(40019749-40019898)
chr1 (9-78)||(50333932-50334001)
chr1 (33-78)||(51049529-51049574)
chr1 (2-78)||(2571353-2571429)
chr1 (1-77)||(5442329-5442405)
chr1 (11-103)||(26755975-26756067)
chr1 (11-103)||(28277055-28277147)
chr1 (2-78)||(33149263-33149339)
chr1 (1-77)||(36784303-36784379)
chr1 (1-79)||(25869669-25869750)
chr1 (2-77)||(28839329-28839404)
chr1 (1-80)||(40988264-40988343)
chr1 (9-104)||(46273157-46273252)
chr1 (11-98)||(48242612-48242699)
chr1 (1-79)||(2246318-2246396)
chr1 (61-186)||(7224450-7224573)
chr1 (10-104)||(17342826-17342920)
chr1 (40-78)||(26924162-26924200)
chr1 (1-103)||(35622796-35622898)
chr1 (15-77)||(43895850-43895912)
chr1 (1-78)||(16040066-16040143)
chr1 (12-128)||(25819338-25819452)
chr1 (1-78)||(25983670-25983747)
chr1 (9-105)||(28706638-28706735)
chr1 (40-105)||(37281012-37281077)
chr1 (2-78)||(2219490-2219566)
chr1 (1-77)||(8327706-8327782)
chr1 (1-105)||(18186221-18186325)
chr1 (13-77)||(21304385-21304449)
chr1 (1-65)||(44657334-44657398)
chr1 (8-76)||(52146699-52146767)
chr1 (40-103)||(27932850-27932913)
chr1 (1-104)||(29678815-29678918)
chr1 (54-105)||(31634308-31634359)
chr1 (33-80)||(34813938-34813985)
chr1 (53-141)||(50926788-50926877)
chr1 (12-73)||(34987937-34987996)
chr1 (33-78)||(5503441-5503486)
chr1 (1-58)||(11324237-11324294)
chr1 (1-58)||(11482258-11482315)
chr1 (1-58)||(27698801-27698858)
chr1 (118-181)||(34332217-34332277)
chr1 (40-105)||(37495857-37495922)
chr1 (1-78)||(39420573-39420650)
chr1 (33-78)||(40754455-40754500)
chr1 (8-61)||(50926176-50926229)
chr1 (1-61)||(15290482-15290542)
chr1 (46-78)||(50086043-50086075)
chr1 (11-103)||(52432311-52432403)
[»] scaffold0086 (1 HSPs)
scaffold0086 (1-105)||(5807-5911)
[»] chr6 (27 HSPs)
chr6 (1-105)||(33017958-33018062)
chr6 (1-78)||(33921510-33921587)
chr6 (1-77)||(34803749-34803825)
chr6 (1-104)||(14312663-14312766)
chr6 (1-78)||(8232352-8232428)
chr6 (14-78)||(16126213-16126277)
chr6 (11-150)||(31265778-31265918)
chr6 (1-104)||(14306256-14306359)
chr6 (1-76)||(31723483-31723558)
chr6 (11-77)||(9755189-9755255)
chr6 (1-78)||(2310329-2310406)
chr6 (1-78)||(15371904-15371981)
chr6 (1-105)||(3874064-3874167)
chr6 (1-80)||(7301119-7301198)
chr6 (42-104)||(7739533-7739595)
chr6 (1-78)||(15321266-15321343)
chr6 (9-138)||(20383843-20383971)
chr6 (1-78)||(28538985-28539062)
chr6 (1-132)||(3604586-3604718)
chr6 (1-73)||(30063995-30064067)
chr6 (1-71)||(8569787-8569857)
chr6 (1-70)||(2657890-2657959)
chr6 (1-78)||(15325136-15325213)
chr6 (1-58)||(33109362-33109419)
chr6 (2-71)||(34441881-34441950)
chr6 (16-76)||(117083-117143)
chr6 (1-77)||(15081412-15081488)
[»] scaffold0003 (1 HSPs)
scaffold0003 (2-105)||(352475-352578)
[»] scaffold0155 (1 HSPs)
scaffold0155 (1-78)||(7995-8072)
[»] scaffold0034 (1 HSPs)
scaffold0034 (2-73)||(98815-98886)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-80)||(171215-171294)
[»] scaffold0096 (1 HSPs)
scaffold0096 (11-56)||(4295-4340)
[»] scaffold0058 (1 HSPs)
scaffold0058 (1-98)||(14445-14542)
[»] scaffold0262 (1 HSPs)
scaffold0262 (1-105)||(12450-12554)
[»] scaffold0028 (1 HSPs)
scaffold0028 (2-77)||(26603-26678)
[»] scaffold0321 (1 HSPs)
scaffold0321 (11-161)||(9511-9657)
[»] scaffold0221 (2 HSPs)
scaffold0221 (11-73)||(8886-8948)
scaffold0221 (1-78)||(10832-10909)
[»] scaffold0654 (1 HSPs)
scaffold0654 (1-58)||(2719-2776)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-77)||(26311-26387)
[»] scaffold0006 (1 HSPs)
scaffold0006 (11-103)||(229822-229914)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-77)||(394767-394843)


Alignment Details
Target: chr5 (Bit Score: 129; Significance: 6e-67; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 14184167 - 14183967
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  14184167 ttttttccaattataactataattaatatcattttcattactctcaattcaatatattatac-ttacatttatgataatgtggaatgcctcaatatttga 14184069  T
Q  101 caaagtgctcaaaact-gtttttctctctctttcgcttatacttttttcttcttaatatgtgcaaaatgaataaaagactcgcttattatgggagtatta 199  Q
    |||    |||||||||  ||||| |||||||||| |||||||   |||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  14184068 caagaaactcaaaactattttttatctctctttcacttatac--atttcttctaaatatgtgcaaaatgaataaaagactcgcttattatcggagtatta 14183971  T
Q  200 tcta 203  Q
    ||||    
T  14183970 tcta 14183967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 17699322 - 17699424
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||| ||||||||||| |||||||||  | |||||| ||||||||||||||||||||||| |||||||||||||| || | ||||| |||||| ||||    
T  17699322 tttttttcaattataactttaattaatactactttcattactctcaattcaatatattataccttacatttatgatattgagaaatgcatcaataattga 17699421  T
Q  101 caa 103  Q
    |||    
T  17699422 caa 17699424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 6173099 - 6173020
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatg 80  Q
    |||||| |||||||||||||||||||||  | |||||| |||| ||||||||||||||||||||| ||||||||||||||    
T  6173099 tttttttcaattataactataattaatactactttcatcactcacaattcaatatattatactttgcatttatgataatg 6173020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 25108562 - 25108690
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||||||||||||| | |||||||||  | |||||  |||  |||||||||||||||||||||||||||||||||| |  ||||||  |||||||| |    
T  25108562 ttttttccaattataattttaattaatactactttcaccacttccaattcaatatattatactttacatttatgataaagaagaatgcagcaatacttaa 25108661  T
Q  101 caaag-tgctcaaaactgtttttctctct 128  Q
    |||||   ||||||||| |||||||||||    
T  25108662 caaagacactcaaaactatttttctctct 25108690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 25111267 - 25111139
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||||||||||||| | |||||||||  | |||||  |||  |||||||||||||| ||||||||||||||||||| |  ||||||  ||||||||||    
T  25111267 ttttttccaattataattttaattaatactactttcaccacttccaattcaatatattctactttacatttatgataaagaagaatgcagcaatacttga 25111168  T
Q  101 caaag-tgctcaaaactgtttttctctct 128  Q
    |||||   ||||||||| |||||||||||    
T  25111167 caaagacactcaaaactatttttctctct 25111139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 25167654 - 25167782
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||||||||||||| | |||||||||  | |||||  |||  |||||||||||||||||||||||||||||||||| |  ||||||  |||||||| |    
T  25167654 ttttttccaattataattttaattaatactactttcaccacttccaattcaatatattatactttacatttatgataaagaagaatgcagcaatacttaa 25167753  T
Q  101 caaag-tgctcaaaactgtttttctctct 128  Q
    |||||   ||||||||| |||||||||||    
T  25167754 caaagacactcaaaactatttttctctct 25167782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 25170358 - 25170230
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||||||||||||| | |||||||||  | |||||  |||  |||||||||||||| ||||||||||||||||||| |  ||||||  ||||||||||    
T  25170358 ttttttccaattataattttaattaatactactttcaccacttccaattcaatatattctactttacatttatgataaagaagaatgcagcaatacttga 25170259  T
Q  101 caaag-tgctcaaaactgtttttctctct 128  Q
    |||||   ||||||||| |||||||||||    
T  25170258 caaagacactcaaaactatttttctctct 25170230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 17741285 - 17741212
Alignment:
Q  8 caattataactataattaatatcattttcataactctcaattcaa---tatattatactttacatttatgataa 78  Q
    |||||||||||||||||||||| | |||||| |||||||||||||   ||||||||||||||||||||||||||    
T  17741285 caattataactataattaatattactttcatcactctcaattcaatactatattatactttacatttatgataa 17741212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 20189881 - 20189984
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    ||||||||  |||||||| |||||||||| | |||||| | |||||||||||||||||  ||||||||||||||||||||  |||||| ||| ||||| |    
T  20189881 ttttttccctttataactctaattaatattactttcatcattctcaattcaatatattccactttacatttatgataatggagaatgcatcagtacttaa 20189980  T
Q  101 caaa 104  Q
    ||||    
T  20189981 caaa 20189984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 36007010 - 36006907
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgac 101  Q
    ||||||||||||||||| |||||||||| |||||||  |||  ||||||| |||||| ||||||||||||||||||| |  ||||||   ||||||||||    
T  36007010 tttttccaattataactctaattaatattattttcaccacttccaattcagtatattctactttacatttatgataaagaagaatgcacaaatacttgac 36006911  T
Q  102 aaag 105  Q
    ||||    
T  36006910 aaag 36006907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 9 - 150
Target Start/End: Original strand, 10044665 - 10044807
Alignment:
Q  9 aattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaa-gtg 107  Q
    |||||||||| |||||||||| | ||||| ||||||||| |||||||| | |||||||||||||||||||    |||||| ||||||||||| |||        
T  10044665 aattataactctaattaatattactttcacaactctcaaatcaatatactttactttacatttatgataaaaaagaatgcatcaatacttgaaaaataca 10044764  T
Q  108 ctcaaaactgtttttctctctctttcgcttatacttttttctt 150  Q
    ||||||||| ||||||||||| ||||  ||||||  |||||||    
T  10044765 ctcaaaactatttttctctctatttcctttatacacttttctt 10044807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 9 - 176
Target Start/End: Original strand, 35988631 - 35988796
Alignment:
Q  9 aattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaagtgc 108  Q
    |||||||||| |||||||||||| |||||  |||| ||||||||||||||  ||||| ||||||||||||    ||||||  |||||||||||||    |    
T  35988631 aattataactttaattaatatcactttcaccactcccaattcaatatattcaactttgcatttatgataagaatgaatgcaccaatacttgacaacacac 35988730  T
Q  109 tcaaaactgtttttctctctctttcgcttatacttttttcttcttaatatgtgcaaaatgaataaaag 176  Q
    | |||||| ||||||||||| |||| ||||||  ||||  |||||||||| ||  ||||||| |||||    
T  35988731 ttaaaactatttttctctctgtttcacttataaatttt--ttcttaatatatgtgaaatgaaaaaaag 35988796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 39183745 - 39183649
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatactt 98  Q
    ||||| ||||||||||| |||||||||| | |||||| |||||||||||||||||||  ||||| ||||||||||| ||  |||| | |||||||||    
T  39183745 ttttttcaattataactctaattaatattactttcatcactctcaattcaatatattccactttgcatttatgatagtggagaattcatcaatactt 39183649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 19889650 - 19889575
Alignment:
Q  3 ttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||| ||||||||||| |||||||||| | |||||  ||| ||||||||||||||| |||||||||||||||||||    
T  19889650 tttttcaattataactctaattaatattactttcaccactttcaattcaatatattctactttacatttatgataa 19889575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 31956719 - 31956798
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatg 80  Q
    ||||||| |||||||||| |||||||||| | ||| || |||||||| ||||||||||  ||||||||||||||||||||    
T  31956719 ttttttctaattataactctaattaatattacttttatcactctcaactcaatatattcaactttacatttatgataatg 31956798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 41268327 - 41268406
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatg 80  Q
    ||||||||||||||||||||||||||||| | |||||| ||||  |||||||||||| ||| ||| ||| ||||||||||    
T  41268327 ttttttccaattataactataattaatattactttcatcactccaaattcaatatatcataatttgcatatatgataatg 41268406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 25344840 - 25344709
Alignment:
Q  18 tataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaa-agtgctcaaaact 116  Q
    |||||||||||  | |||||| | ||||||||||||||||| |||||||||||||||||||||  ||||||   |||| ||||||| | |  | |||| |    
T  25344840 tataattaatactactttcatcattctcaattcaatatattctactttacatttatgataatggtgaatgcactaatatttgacaacact--taaaaaat 25344743  T
Q  117 gtttttctctctctttcgcttatacttttttctt 150  Q
     |||||||||||||||| ||||||| ||||||||    
T  25344742 atttttctctctctttcacttatacatttttctt 25344709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 15898181 - 15898274
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaata 95  Q
    ||||| ||||||||||  |||||||||| | |||||  ||||||||||||||||||| |||||| |||||||||||| |  |||||| ||||||    
T  15898181 ttttttcaattataacactaattaatattactttcaccactctcaattcaatatattctactttgcatttatgataaagaagaatgcatcaata 15898274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 34534912 - 34534985
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatga 75  Q
    ||||| ||||||||||| |||||||||| | ||| || | ||||||||||||||||||||||||| ||||||||    
T  34534912 ttttttcaattataactctaattaatattacttttatcattctcaattcaatatattatactttatatttatga 34534985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 42818893 - 42818969
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||| ||||||||||| |||||||||  |||||||  ||||||| ||||||||||| |||||||||||||||||||    
T  42818893 tttttttcaattataactctaattaatactattttcaccactctca-ttcaatatattctactttacatttatgataa 42818969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 39212663 - 39212567
Alignment:
Q  8 caattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataat-gtggaatgcctcaatacttgacaa 103  Q
    ||||||||||| |||||||||  | ||||||  ||| |||||||||||||| |||||| ||||||||||||| | |||||||  |||||||||||||    
T  39212663 caattataactctaattaatactactttcatcgctcccaattcaatatattctactttgcatttatgataatgggggaatgcaccaatacttgacaa 39212567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 175
Target Start/End: Complemental strand, 4439317 - 4439152
Alignment:
Q  9 aattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaagtgc 108  Q
    |||||||||| | |||| ||  |||||||| ||| ||| |||||||||||||| |||||||||||| ||||   || ||| |||| | |||||||    |    
T  4439317 aattataactctgattagtaatattttcatcactttcagttcaatatattatattttacatttatggtaatagagagtgcatcaacaattgacaagacac 4439218  T
Q  109 tcaaaactgtttttctctctctttcgcttatacttttttcttcttaatatgtgcaaaatgaataaaa 175  Q
    |||||| | ||||| | |||||||| |||||||||| ||||| |||| ||||| ||||| |||||||    
T  4439217 tcaaaattatttttttatctctttcacttatactttcttctt-ttaacatgtgtaaaataaataaaa 4439152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 5357936 - 5357786
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    ||||||| |||||||||| |||||||||| | |||||  |||  |||| ||||||||| ||||||||||||||||||| |  |||||   |||||||| |    
T  5357936 ttttttcaaattataactctaattaatattactttcaccacttccaatacaatatattctactttacatttatgataaagaagaatgaaccaatacttaa 5357837  T
Q  101 caaag-tgctcaaaactgtttttctctctctttcgcttatacttttttctt 150  Q
    |||||   ||||||||  |||||||||||| ||| || |||  ||||||||    
T  5357836 caaagacactcaaaaccatttttctctctccttcactaatatatttttctt 5357786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 13422463 - 13422414
Alignment:
Q  9 aattataactataattaatatcattttcataactctcaattcaatatatt 58  Q
    ||||||||||||||||||||| | |||||| |||||||||||||||||||    
T  13422463 aattataactataattaatattactttcatcactctcaattcaatatatt 13422414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 5072940 - 5073016
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    ||||| ||||||||||| |||||||||  | || |||  ||| |||||||||||||| |||||||||||||||||||    
T  5072940 ttttttcaattataactctaattaatactacttccattgctcccaattcaatatattttactttacatttatgataa 5073016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 11099586 - 11099446
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaagtg-ct 109  Q
    |||||||| |||||||||  | |||||| |||| ||||||||||||||  |||||  |||||||||| ||  ||||||  |||||||| |||||    ||    
T  11099586 ttataactctaattaatactactttcatcactcccaattcaatatattccactttgtatttatgatagtggagaatgcaccaatacttaacaaaaacact 11099487  T
Q  110 caaaactgtttttctctctctttcgcttatacttttttctt 150  Q
     |||||| ||||||||||||||||  |||||| ||||||||    
T  11099486 taaaactatttttctctctctttcatttatacatttttctt 11099446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 6610836 - 6610923
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatactt 98  Q
    |||||||| |||||||||| | |||||| ||||  |||||||||||||  ||||||||||||||||| ||  ||||||  ||||||||    
T  6610836 ttataactttaattaatattactttcatcactccgaattcaatatatttcactttacatttatgatagtggagaatgcaccaatactt 6610923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 17243072 - 17242997
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    |||||||  |||||||| |||||||||  | |||||| |||||||||||||||||||  ||||| |||||||||||    
T  17243072 tttttccctttataactctaattaatactactttcatcactctcaattcaatatattccactttgcatttatgata 17242997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 3725175 - 3725325
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    ||||||||  |||||||| |||||||||| | |||||| |||| |||||| |||||||  ||| | ||||||||||| ||  ||||||  |||||||| |    
T  3725175 ttttttccctttataactctaattaatattactttcatcactcacaattcgatatattccactatgcatttatgatagtggagaatgcaccaatacttaa 3725274  T
Q  101 caa-agtgctcaaaactgtttttctctctctttcgcttatacttttttctt 150  Q
    ||| ||  || |||||  |||||||||||| |||  |||||| ||||||||    
T  3725275 caatagcacttaaaaccatttttctctctccttcctttatacatttttctt 3725325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 13087841 - 13087783
Alignment:
Q  20 taattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||||| | |||||  ||||||||||||||||||| |||||| ||||||||||||    
T  13087841 taattaatattactttcaccactctcaattcaatatattctactttgcatttatgataa 13087783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 15564988 - 15564930
Alignment:
Q  20 taattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||||| | |||||| |||||||||| |||||||| |||||| ||||||||||||    
T  15564988 taattaatattactttcatcactctcaatttaatatattctactttgcatttatgataa 15564930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 16926208 - 16926068
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    ||||||||||||||||||  ||| |||| || ||||| ||||  |||||||||||||| |||||| |||||||||||| |  ||||||  |||||||| |    
T  16926208 ttttttccaattataactcaaat-aata-cactttcacaacttccaattcaatatattctactttccatttatgataaagaagaatgcaccaatacttaa 16926111  T
Q  101 c-aaagtgctcaaaactgtttttctctctctttcgcttatact 142  Q
    | || |  ||||||||  |||||||| ||||||| ||||||||    
T  16926110 cgaaggcactcaaaaccatttttctcactctttcacttatact 16926068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 33988199 - 33988265
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    |||||||| ||||| |||| | |||||| |||| ||||||||||||||  |||||||||||||||||    
T  33988199 ttataactctaattcatattactttcattactcccaattcaatatattccactttacatttatgata 33988265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 35585735 - 35585633
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||| ||||||||||| |||| ||||| | |||||| |||||||||||||||||||  |||||   ||||||||| ||   ||||| ||||||||| |    
T  35585735 tttttttcaattataactttaatcaatattactttcatcactctcaattcaatatatttcactttgtctttatgatagtggataatgcatcaatacttaa 35585636  T
Q  101 caa 103  Q
    |||    
T  35585635 caa 35585633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 38978893 - 38978979
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatg 87  Q
    |||||| |||| |||||| |||||||||  | | ||| ||||||||||| |||||||| |||||| |||||||||||| | ||||||    
T  38978893 ttttttacaatcataactctaattaatactactatcacaactctcaatttaatatattctactttgcatttatgataaagaggaatg 38978979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 42158764 - 42158686
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatg 80  Q
    ||||| |||| |||||| |||||||||| | ||||||   ||||||||||| ||||| |||||| ||||||||||||||    
T  42158764 ttttttcaatcataactctaattaatattactttcatctttctcaattcaacatattttactttgcatttatgataatg 42158686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 4044586 - 4044497
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||| | |||||||||  |||||||  || | |||||||||||||| ||||||||||||||||||| |  ||||||  ||||||||||    
T  4044586 ttataaatttaattaataatattttcaccacacccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttga 4044497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 36446787 - 36446730
Alignment:
Q  20 taattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    |||||||||  | |||||| ||| |||||||||||||||||||||| |||||||||||    
T  36446787 taattaatactactttcatcactttcaattcaatatattatactttgcatttatgata 36446730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 43525475 - 43525544
Alignment:
Q  9 aattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||||| |||||||||  | |||||  |||  |||||||| |||||||||||||||||||||||||    
T  43525475 aattataactctaattaatactactttcaccacttccaattcaacatattatactttacatttatgataa 43525544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 7613706 - 7613798
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaa 103  Q
    ||||||||||||||||||| | ||| || | |  ||||||||||||||  ||||||||||||||||| ||  ||||||  |||||||| ||||    
T  7613706 ttataactataattaatattacttttatcatttccaattcaatatatttcactttacatttatgatagtggagaatgcaccaatacttaacaa 7613798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 8369805 - 8369713
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaa 103  Q
    |||||||| |||||||||  | ||||| |||| |||||||||||||||  ||||| ||||||||||| ||  ||||||  |||||||| ||||    
T  8369805 ttataactctaattaatactactttcacaactttcaattcaatatattccactttgcatttatgatagtggagaatgcaccaatacttaacaa 8369713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 15254762 - 15254830
Alignment:
Q  9 aattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    |||||||||| |||||||||| | |||||| ||| ||||||||||||||| || ||| |||| ||||||    
T  15254762 aattataactctaattaatattactttcatcactttcaattcaatatattctaatttgcattaatgata 15254830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 35334645 - 35334569
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    ||||||||  |||||||| |||||||||  | |||||| |||| ||||||||||||||  ||||| |||||||||||    
T  35334645 ttttttccttttataactctaattaatactactttcatcactcccaattcaatatattccactttgcatttatgata 35334569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 36469205 - 36469137
Alignment:
Q  9 aattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    |||||||| | |||||||||  | |||||| ||| | |||||||||||||||||||| |||||||||||    
T  36469205 aattataattctaattaatactactttcatcacttttaattcaatatattatactttgcatttatgata 36469137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 43572997 - 43573097
Alignment:
Q  4 tttccaattata-actataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgaca 102  Q
    |||||||||||| |||||||||||||  | |||||| |||| ||||||||||| |   ||||| |||||||||| |||  ||||||  ||||||||||||    
T  43572997 tttccaattatacactataattaatactaatttcatcactcccaattcaatatctcccactttgcatttatgatcatggtgaatgcaccaatacttgaca 43573096  T
Q  103 a 103  Q
    |    
T  43573097 a 43573097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 7311267 - 7311220
Alignment:
Q  33 tttcataactctcaattcaatatattatactttacatttatgataatg 80  Q
    |||||| ||||| ||||||||||||| |||||| ||||||||||||||    
T  7311267 tttcatcactcttaattcaatatattctactttgcatttatgataatg 7311220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 13016463 - 13016405
Alignment:
Q  20 taattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||||| | |||||  |||| |||||||||||||| |||||| ||||||||||||    
T  13016463 taattaatattactttcaccactcccaattcaatatattctactttgcatttatgataa 13016405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 16884042 - 16883972
Alignment:
Q  9 aattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataat 79  Q
    |||||||||| |||||||||  | |||||  || |  ||||||||||||| ||||||||||||||||||||    
T  16884042 aattataactctaattaatactactttcaccacccctaattcaatatattttactttacatttatgataat 16883972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 80
Target Start/End: Original strand, 22398309 - 22398347
Alignment:
Q  42 tctcaattcaatatattatactttacatttatgataatg 80  Q
    ||||||||||||||||| | |||||||||||||||||||    
T  22398309 tctcaattcaatatattctgctttacatttatgataatg 22398347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 72224 - 72147
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    ||||| |||||||||| | |||||||||  | |||||| ||||  |||| |||||||| |||||| ||||||||||||    
T  72224 tttttcccaattataaatctaattaatactactttcatcactcctaatttaatatattctactttgcatttatgataa 72147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 858334 - 858403
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatg 80  Q
    |||||||| |||||||||  | |||||| |||||||||| ||||||||  | ||| ||||||||||||||    
T  858334 ttataactctaattaatactactttcatcactctcaattaaatatatttcattttgcatttatgataatg 858403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 79
Target Start/End: Original strand, 32659846 - 32659883
Alignment:
Q  42 tctcaattcaatatattatactttacatttatgataat 79  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  32659846 tctcaattcaatatattatactttgcatttataataat 32659883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 39061065 - 39060996
Alignment:
Q  9 aattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||||  |||||||||| | |||||  ||||  ||||||||||||| |||||| ||||||||||||    
T  39061065 aattataacattaattaatattactttcaccactcctaattcaatatattctactttgcatttatgataa 39060996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 14259656 - 14259728
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttat 73  Q
    ||||||||  |||||| | |||||||||| | |||||| |||| ||||| || |||||||||||| |||||||    
T  14259656 ttttttccttttataattctaattaatattaatttcattactcccaatttaacatattatactttgcatttat 14259728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 16283674 - 16283630
Alignment:
Q  33 tttcataactctcaattcaatatattatactttacatttatgata 77  Q
    |||||| |||||||||||||||||||  ||||| |||||||||||    
T  16283674 tttcatcactctcaattcaatatattccactttgcatttatgata 16283630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 25814353 - 25814429
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    ||||||||  |||||||| |||||||||| | | |||| | |  ||||||||||||||  |||||||||||||||||    
T  25814353 ttttttccttttataactttaattaatattactctcatcatttccaattcaatatatttcactttacatttatgata 25814429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 32539659 - 32539727
Alignment:
Q  9 aattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    |||||||||| |||||||||  |||||||| |||  | ||| |||||||| || |||||||||||||||    
T  32539659 aattataactctaattaatactattttcatcacttccgatttaatatattttattttacatttatgata 32539727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 39008118 - 39008193
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    ||||||||  |||||||| |||||||||  | ||||| ||||  ||||||||||||||  |||||||||||||||||    
T  39008118 ttttttccctttataactctaattaatactactttca-aacttccaattcaatatatttcactttacatttatgata 39008193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 42575757 - 42575681
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    ||||||||  |||||||| |||||||||  | ||||| ||||  ||||||||||||||  ||||| |||||||||||    
T  42575757 ttttttccctttataactttaattaatactactttcacaacttccaattcaatatattccactttgcatttatgata 42575681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 6e-33; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 3 - 141
Target Start/End: Original strand, 41287253 - 41287392
Alignment:
Q  3 ttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgaca 102  Q
    |||||||||||||||| |||||||||| | ||||| |||||||||||||||||||| ||||||||||||||||||| |   ||||| |||||||||||||    
T  41287253 ttttccaattataactctaattaatattaatttcacaactctcaattcaatatattctactttacatttatgataaagaataatgcatcaatacttgaca 41287352  T
Q  103 aag-tgctcaaaactgtttttctctctctttcgcttatac 141  Q
    ||| |  |||||||  |||||||||||||||| |||||||    
T  41287353 aagatagtcaaaaccatttttctctctctttcacttatac 41287392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 3862289 - 3862188
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgac 101  Q
    ||||| ||||||||||| |||||||||| | |||||| |||||||||||| |||||| || ||| |||||||||||||||||||||| ||||| ||||||    
T  3862289 ttttttcaattataactctaattaatattactttcatcactctcaattcagtatattttaatttgcatttatgataatgtggaatgcatcaatccttgac 3862190  T
Q  102 aa 103  Q
    ||    
T  3862189 aa 3862188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 44219151 - 44218962
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||||||||||||||| |||||||||  |||||||| |||  |||||||||||||| ||||||  ||||||||||||| |||||||  ||| |||| |    
T  44219151 ttttttccaattataactctaattaatactattttcattacttccaattcaatatattctactttgtatttatgataatggggaatgcaccaacactt-a 44219053  T
Q  101 caaagtgctcaaaactgtttttctctctctttcgcttatacttttttcttcttaatatgtgcaaaatgaataaaagactcgcttattatggga 193  Q
    |||    ||||||||  ||||||||| |||||  |||||||  |||  |||||||||||||  ||||||| |||||||| | |||||||||||    
T  44219052 caagacactcaaaaccatttttctctttctttgacttatacacttt--ttcttaatatgtgtgaaatgaacaaaagactgggttattatggga 44218962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 53051015 - 53051147
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||| ||||||||||||| |||||||||  | ||||| ||||| ||||||||||||||||||||||||||||||||||    ||||||   |||||||||    
T  53051015 ttttctccaattataactctaattaatactactttcacaactcccaattcaatatattatactttacatttatgataaacaagaatgcacaaatacttga 53051114  T
Q  101 caaa-gtgctcaaaactgtttttctctctcttt 132  Q
     ||| |  ||||||||| |||||||||||||||    
T  53051115 aaaaggcactcaaaactatttttctctctcttt 53051147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 9218134 - 9218292
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    ||||||||| |||||||| |||||||||  | |||||| |||||||||||| |||||| |||||| ||||||||||||    ||||||  |||||||| |    
T  9218134 ttttttccatttataactctaattaatactactttcatcactctcaattcattatattctactttgcatttatgataagaaagaatgcaccaatacttaa 9218233  T
Q  101 caaagtgctcaaaactgtttttctctctctttcgcttatacttttttcttcttaatatgtg 161  Q
    | |    ||||||||| |||||||||||||||| |||||||  |||  |||||||||||||    
T  9218234 cgagacactcaaaactatttttctctctctttcacttatacacttt--ttcttaatatgtg 9218292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 39329868 - 39329710
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||||||||||||| | |||||||||  | |||||| ||||||||||||||||||| |||||| ||||||||||||    ||||||  |||||||| |    
T  39329868 ttttttccaattataattctaattaatactactttcatcactctcaattcaatatattctactttgcatttatgataagaaagaatgcaccaatacttaa 39329769  T
Q  101 caaagtgctcaaaactgtttttctctctctttcgcttatacttttttcttcttaatatgtg 161  Q
    |||     |||||||| ||| ||| |||||||| ||||||| ||||  |||||||||||||    
T  39329768 caagacattcaaaactatttatctttctctttcacttatacatttt--ttcttaatatgtg 39329710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 32977908 - 32977776
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||| ||||||||||||| |||||||||  | ||||| |||||||||||||||||||| ||  ||||||||||||||| |   ||||| |||||||||||    
T  32977908 ttttctccaattataactctaattaatactactttcacaactctcaattcaatatattctaaattacatttatgataaagaaaaatgcatcaatacttga 32977809  T
Q  101 caaa-gtgctcaaaactgtttttctctctcttt 132  Q
     ||| |  ||||||||| |||||||| ||||||    
T  32977808 aaaatgcactcaaaactatttttctccctcttt 32977776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 47496158 - 47496235
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    ||||||| |||||||||| |||||||||  | |||||| ||||| |||||||||||||| ||||||||||||||||||    
T  47496158 ttttttcaaattataactctaattaatactactttcatcactcttaattcaatatattagactttacatttatgataa 47496235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 48409573 - 48409725
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||||||||||||||| |||||||||  | |||||  |||| |||||||| ||||| ||||||||||||||||||| |  |||| |  ||||||||||    
T  48409573 ttttttccaattataactctaattaatactactttcaccactcccaattcaacatattctactttacatttatgataaagaagaatccaccaatacttga 48409672  T
Q  101 caaag-tgctcaaaac--tgtttttctctctctttcgcttatacttttttctt 150  Q
    |||||   ||||||||  | ||| ||||||||||||  |||||| ||||||||    
T  48409673 caaagacactcaaaacaatctttctctctctctttcatttatacatttttctt 48409725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 150
Target Start/End: Complemental strand, 38600921 - 38600774
Alignment:
Q  4 tttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaa 103  Q
    |||||| |||||||| |||||||||  | |||||| |||| || ||||||||||||||||||||||||||| ||| |  ||||||  |||||||||| ||    
T  38600921 tttccatttataactctaattaatactactttcatcactcccagttcaatatattatactttacatttatggtaaagaagaatgcaccaatacttgataa 38600822  T
Q  104 agtg-ctcaaaactgtttttctctctctttcgcttatacttttttctt 150  Q
    || | |||||||   ||||||||||| ||||  ||||||  |||||||    
T  38600821 agggactcaaaatcatttttctctctttttcatttatacacttttctt 38600774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 1334889 - 1334749
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaagtgc-- 108  Q
    |||||||| |||||||||  | |||||  |||| |||||||||||||| ||||||||||||||||||| |  ||||||  |||||||||| |||| ||      
T  1334889 ttataactctaattaatactactttcaccactcccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgataaag-gcat 1334791  T
Q  109 tcaaaactgtttttctctctctttcgcttatacttttttctt 150  Q
    |||||| | ||||||||||||||||  ||||||  |||||||    
T  1334790 tcaaaattatttttctctctctttcatttatacgcttttctt 1334749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 30261612 - 30261482
Alignment:
Q  9 aattataactataattaatatcattttcataactctcaa-ttcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaagtg 107  Q
    |||||||||| |||||||||  | |||||| |||| ||| |||||||||||  ||||||||||||||||||   |||||||  |||||||||||||        
T  30261612 aattataactctaattaatactactttcatcactcccaaattcaatatattccactttacatttatgataagaaggaatgcaccaatacttgacaagcca 30261513  T
Q  108 ctcaaaactgtttttctctctctttcgctta 138  Q
     |||||||| |||||||||||||||| ||||    
T  30261512 gtcaaaactatttttctctctctttcactta 30261482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 46194324 - 46194247
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||||||||||||  |||||||||  | |||||  ||||||||||||||||||| |||||| ||||||||||||    
T  46194324 ttttttccaattataacactaattaatactactttcaccactctcaattcaatatattctactttgcatttatgataa 46194247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 33994646 - 33994796
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    ||||||||  |||||||| ||||||||| || |||||| | ||||| |||||||||||  ||||||||||||||||| ||  ||||||  |||||||| |    
T  33994646 ttttttccctttataactctaattaataccactttcatcattctcagttcaatatattccactttacatttatgatagtggagaatgcaccaatacttaa 33994745  T
Q  101 caaagtg--ctcaaaactgtttttctctctctttcgcttatacttttttctt 150  Q
    | |||||  || |||| | |||||||||||| |||  |||||| ||||||||    
T  33994746 c-aagtgcacttaaaattatttttctctctccttcatttatacatttttctt 33994796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 29858983 - 29858880
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||||||||||||| | |||||||||  | |||||  ||||  ||||||||||||| ||||||||||||||||||| |  |||||   ||||||||||    
T  29858983 ttttttccaattataattctaattaatactactttcaccactcataattcaatatattctactttacatttatgataaagaagaatgtaccaatacttga 29858884  T
Q  101 caaa 104  Q
    ||||    
T  29858883 caaa 29858880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 32023219 - 32023116
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    ||||||||  |||||||| |||||||||| | |||||| |||||||||||||||||||  ||||| ||||||| ||| ||  ||||||  |||||||| |    
T  32023219 ttttttccctttataactctaattaatattactttcatcactctcaattcaatatattcaactttgcatttataatagtggagaatgcaccaatacttaa 32023120  T
Q  101 caaa 104  Q
    ||||    
T  32023119 caaa 32023116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 50150485 - 50150411
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatga 75  Q
    |||||||||||||||| | |||||||||| |||||||  |||| ||||| |||||||| || |||||||||||||    
T  50150485 ttttttccaattataattctaattaatattattttcaccactcccaatttaatatattttaatttacatttatga 50150411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 1923079 - 1923156
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||||||||||||  |||||||||  | |||||  |||| |||||||||||||| |||||| ||||||||||||    
T  1923079 ttttttccaattataacactaattaatactactttcaccactcccaattcaatatattctactttgcatttatgataa 1923156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 17777112 - 17777039
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatg 74  Q
    |||||| ||| ||||||| |||||||||| |||||||| |||||| ||||||||||||  ||||| ||||||||    
T  17777112 tttttttcaaatataactctaattaatattattttcatcactctcgattcaatatattccactttgcatttatg 17777039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 19078413 - 19078340
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatg 74  Q
    |||||| ||| ||||||| |||||||||| |||||||| |||||| ||||||||||||  ||||| ||||||||    
T  19078413 tttttttcaaatataactctaattaatattattttcatcactctcgattcaatatattccactttgcatttatg 19078340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 129
Target Start/End: Original strand, 5245402 - 5245530
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgac 101  Q
    |||||||  |||||||| ||||||||| || |||||| |||||||||||||||||||  |||||  |||||||||| ||  |||| |  |||||||| ||    
T  5245402 tttttccctttataactctaattaataccactttcatcactctcaattcaatatattccactttgtatttatgatattggagaatacaccaatacttaac 5245501  T
Q  102 aa-agtgctcaaaactgtttttctctctc 129  Q
    || ||  || |||||| ||||||||||||    
T  5245502 aagagcacttaaaactatttttctctctc 5245530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 132
Target Start/End: Original strand, 51164986 - 51165073
Alignment:
Q  46 aattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaag-tgctcaaaactgtttttctctctcttt 132  Q
    ||||||||||||| ||||||||||||||||||| |  ||||||  |||||||||| ||||   ||||||| | |||||||||||||||    
T  51164986 aattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgataaagacactcaaaattatttttctctctcttt 51165073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 53876544 - 53876478
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    |||||| | |||||||| | | |||||| |||||||||||||||||||  |||||||||||||||||    
T  53876544 ttataattctaattaattttactttcatcactctcaattcaatatatttcactttacatttatgata 53876478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 21585528 - 21585451
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    ||||| |||||||||||| |||||||||| | |||||  |||  |||| ||||||||| || ||||||||||||||||    
T  21585528 tttttcccaattataactctaattaatattactttcaccacttccaatacaatatattctattttacatttatgataa 21585451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 35300658 - 35300703
Alignment:
Q  33 tttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||| |||||| |||||||||||| |||||||||||||||||||    
T  35300658 tttcatcactctctattcaatatattttactttacatttatgataa 35300703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 103
Target Start/End: Complemental strand, 46628002 - 46627941
Alignment:
Q  42 tctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaa 103  Q
    |||| ||||||||||||||||||| ||||||||||||||   ||| | ||||||||||||||    
T  46628002 tctctattcaatatattatactttgcatttatgataatggtaaatacatcaatacttgacaa 46627941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 133
Target Start/End: Complemental strand, 53583635 - 53583546
Alignment:
Q  44 tcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaagtgctcaaaactgtttttctctctctttc 133  Q
    ||||||| ||||||| |||||| ||||||| ||||||  |||||| ||||||||||||||     |||||||| ||||||| ||||||||    
T  53583635 tcaattccatatattctactttgcatttataataatgaagaatgcatcaatacttgacaacacattcaaaactatttttctatctctttc 53583546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 53754182 - 53754105
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||| ||||||||||| |||||||||  | ||| |  | ||| ||||||||||||| |||||||||||||||||||    
T  53754182 tttttttcaattataactctaattaatactacttttactattcttaattcaatatattctactttacatttatgataa 53754105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 54458417 - 54458348
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatg 80  Q
    |||||||  ||||||||||  ||||| | | |||||||||||||||||  ||||||||||||||||||||    
T  54458417 ttataaccttaattaatattgttttcctcattctcaattcaatatattccactttacatttatgataatg 54458348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 21296621 - 21296545
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    ||||||||  |||||||| |||||||||  | ||||| ||||  |||||||||||||| |||||| |||||||||||    
T  21296621 ttttttccttttataactctaattaatactactttcacaacttccaattcaatatattctactttgcatttatgata 21296545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 29807181 - 29807125
Alignment:
Q  23 ttaatatcattttcataactctcaattcaatatattatactttacatttatgataat 79  Q
    ||||||| ||||| || ||| ||||||||||||||| || |||||||||||||||||    
T  29807181 ttaatattatttttatcactttcaattcaatatattttattttacatttatgataat 29807125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 34081172 - 34081100
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatg 74  Q
    |||| |||||||||| | |||||||||  | ||| || | |||||||| ||||||||||||||||||||||||    
T  34081172 ttttaccaattataaatttaattaatactacttttatcattctcaatttaatatattatactttacatttatg 34081100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 39866661 - 39866521
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaagt-gct 109  Q
    |||||||| ||||||||| || |||||| |||| ||||||||| ||||  ||||| ||||||||||| ||  |||| |  |||||||| ||||| |  ||    
T  39866661 ttataactctaattaataccactttcatcactcacaattcaatgtatttcactttgcatttatgatagtggagaatacaccaatacttaacaaaatcact 39866562  T
Q  110 caaaactgtttttctctctctttcgcttatacttttttctt 150  Q
     |||||| ||||||||| || |||  |||||| ||||||||    
T  39866561 taaaactatttttctctttccttcatttatacatttttctt 39866521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 104
Target Start/End: Original strand, 48744291 - 48744351
Alignment:
Q  44 tcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaa 104  Q
    |||||||||||||||  ||||||||||||||||| ||  |||||| ||||||||| |||||    
T  48744291 tcaattcaatatatttcactttacatttatgatagtggagaatgcatcaatacttaacaaa 48744351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 52325166 - 52325242
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    |||||| ||||||||||| |||||||||  | |||| | | |||||||||||||||||  ||||| |||||||||||    
T  52325166 tttttttcaattataactctaattaatactactttcgtcattctcaattcaatatattccactttgcatttatgata 52325242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 147
Target Start/End: Original strand, 9017810 - 9017937
Alignment:
Q  21 aattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgac-aaagtgctcaaaactgtt 119  Q
    |||||||||  ||||||| |||  ||||||||||||||  ||||| ||||||| ||| ||  ||||||  |||||||| || ||||  || |||||| ||    
T  9017810 aattaatattgttttcatcacttccaattcaatatatttcactttgcatttataatagtggagaatgcaccaatacttaacaaaagcacttaaaactatt 9017909  T
Q  120 tttctctctctttcgcttatactttttt 147  Q
    ||||||||||||||  |||||| |||||    
T  9017910 tttctctctctttcatttatacattttt 9017937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 27668437 - 27668366
Alignment:
Q  9 aattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatg 80  Q
    |||||||||| |||||||||  | ||| || ||||| |||||||||||||  ||||| ||||||||||||||    
T  27668437 aattataactctaattaatactacttttatcactcttaattcaatatatttcactttgcatttatgataatg 27668366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 39144770 - 39144840
Alignment:
Q  122 tctctctctttcgcttatacttttttcttcttaatatgtgcaaaatgaataaaagactcgcttattatggga 193  Q
    |||||||||||| ||||||| ||||| |||||||||||||  ||||||| ||||| ||| ||||| ||||||    
T  39144770 tctctctctttcacttatacattttt-ttcttaatatgtgtgaaatgaacaaaaggctcacttataatggga 39144840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 49003269 - 49003335
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    |||||||| | ||||||||  ||||||| ||| |||||||||||||||  || ||||||||||||||    
T  49003269 ttataactctcattaatattcttttcatcactttcaattcaatatattccaccttacatttatgata 49003335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 7885746 - 7885803
Alignment:
Q  15 aactataattaatatcattttcataactctcaattcaatatattatactttacattta 72  Q
    |||| |||||||||  | |||||| |||||||||||||| ||||||||||| ||||||    
T  7885746 aactctaattaatacaactttcatcactctcaattcaatgtattatactttgcattta 7885803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 45746355 - 45746428
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatg 74  Q
    |||||| ||||||||||| |||||||||  | |||||| ||||| || || ||||||| |||||| ||||||||    
T  45746355 tttttttcaattataactctaattaatactactttcatcactcttaactccatatattctactttgcatttatg 45746428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 15280594 - 15280670
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    ||||||||  |||||||  |||||||||  | |||||| |||| ||||||||||||||  ||||| |||||||||||    
T  15280594 ttttttccttttataaccctaattaatactactttcatcactcccaattcaatatattccactttccatttatgata 15280670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 26134821 - 26134745
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    ||||||||  |||||||| |||||| ||  | |||||| |||| ||||||||||||||  ||||| |||||||||||    
T  26134821 ttttttccttttataactctaattagtactactttcatcactcccaattcaatatatttcactttgcatttatgata 26134745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 29361610 - 29361677
Alignment:
Q  12 tataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatg 80  Q
    ||||||| |||||||||| ||||||| |  | ||||||||||||||| |||||| |||||||| |||||    
T  29361610 tataactctaattaatattattttcacacat-tcaattcaatatattttactttgcatttatgttaatg 29361677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 37041991 - 37041915
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    |||||| ||||||||||| |||||||||  | |||||| | |  ||||||||||||||  |||||| ||||||||||    
T  37041991 tttttttcaattataactctaattaatactactttcatcatttccaattcaatatatttcactttatatttatgata 37041915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 41031561 - 41031633
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttat 73  Q
    ||||||||| |||||||| |||||||||  | |||||| | |  ||||||||||||||  |||||||||||||    
T  41031561 ttttttccatttataactttaattaatactactttcatcatttccaattcaatatatttcactttacatttat 41031633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 43639624 - 43639532
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaa 103  Q
    |||||||| |||||||||  | ||||| ||||  ||||||||||||||  ||||| ||||||||||| ||   ||||| ||||||||| ||||    
T  43639624 ttataactctaattaatactactttcacaacttccaattcaatatatttcactttgcatttatgatagtggaaaatgcatcaatacttaacaa 43639532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 47165272 - 47165208
Alignment:
Q  41 ctctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaag 105  Q
    ||||||||||||||  ||  ||||||||||||||||||||   ||||| | ||||||||||||||    
T  47165272 ctctcaattcaatagctttcactttacatttatgataatggtaaatgcattaatacttgacaaag 47165208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 47684876 - 47684920
Alignment:
Q  149 ttcttaatatgtgcaaaatgaataaaagactcgcttattatggga 193  Q
    |||||||||||||  ||||||| |||||||||| |||||||||||    
T  47684876 ttcttaatatgtgtgaaatgaacaaaagactcggttattatggga 47684920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 4e-28; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 31592540 - 31592679
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgac 101  Q
    ||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||| ||||||  |||||||||||    ||||||  |||||||||||    
T  31592540 tttttccaattataactttaattaatattattttcatcactctcaattcaatatattctactttgtatttatgataagaaagaatgcagcaatacttgac 31592639  T
Q  102 aaagtgctcaaaactgtttttctctctctttcgcttatac 141  Q
    ||    ||| ||||| |||||||||||||||| |||||||    
T  31592640 aagacactcgaaactatttttctctctctttcacttatac 31592679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 147
Target Start/End: Original strand, 2048282 - 2048428
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgac 101  Q
    ||||| ||||||||||| |||||||||| |||||||  ||||||||||||||||||| |||||| ||||||||||||    ||||||  ||||| ||||     
T  2048282 ttttttcaattataactctaattaatattattttcactactctcaattcaatatattctactttgcatttatgataaacaagaatgcaccaatagttgat 2048381  T
Q  102 aa-agtgctcaaaactgtttttctctctctttcgcttatactttttt 147  Q
    || ||  |||| |||  |||||||||||||||| ||||||| |||||    
T  2048382 aagagcactcataaccatttttctctctctttcacttatacattttt 2048428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 14384396 - 14384298
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttg 99  Q
    |||||| ||||||||| | |||||||||  | |||| | |||||||||||||||||||||||||||||||||||||||||  ||||||  |||||||||    
T  14384396 tttttttcaattataattctaattaatactactttcttcactctcaattcaatatattatactttacatttatgataatgatgaatgcaccaatacttg 14384298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 24356100 - 24356250
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||| ||||||||||| |||||||||  | |||||  |||| |||||||| ||||| ||||||||||||||||||| |  |||||| |||||||||||    
T  24356100 tttttttcaattataactctaattaatactactttcacgactcccaattcaacatattctactttacatttatgataaagaagaatgcatcaatacttga 24356199  T
Q  101 caaa-gtgctcaaaactgtttttctctctctttcgcttatacttttttctt 150  Q
     ||| |  |||||||||  |||||||||||||||  ||||||  |||||||    
T  24356200 aaaaggcactcaaaactagttttctctctctttcctttatacacttttctt 24356250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 7931614 - 7931537
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||| ||||||||||| |||||||||  | ||||| |||||||||||||||||||| |||||||||||||||||||    
T  7931614 tttttttcaattataactctaattaatactactttcacaactctcaattcaatatattttactttacatttatgataa 7931537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 8550752 - 8550611
Alignment:
Q  9 aattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaa-agtg 107  Q
    ||||||||||||||||||||  | |||||| ||||| |||||||||||||| ||||| ||||||||||||||  ||||||   |||||||||||| |       
T  8550752 aattataactataattaatactactttcatcactcttaattcaatatattagactttgcatttatgataatggagaatgcacaaatacttgacaagaaca 8550653  T
Q  108 ctcaaaactgtttttctctctctttcgcttatacttttttct 149  Q
    || |||||   ||||||||||||||| ||||||| |||||||    
T  8550652 cttaaaaccacttttctctctctttcacttatacatttttct 8550611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 9472411 - 9472515
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||| |||||||||||||||||||||  | |||||  ||| ||||||||||||||| |||| |||||||||||||| |  |||||  |||||||||||    
T  9472411 tttttttcaattataactataattaatactactttcaccactatcaattcaatatattctactatacatttatgataaagaagaatgtatcaatacttga 9472510  T
Q  101 caaag 105  Q
    |||||    
T  9472511 caaag 9472515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 7420988 - 7420849
Alignment:
Q  8 caattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaagtg 107  Q
    ||||||||||| |||||||||| | |||| | |||||| ||| |||||||| |||||| ||||||||||||||   ||||| | |||| |||||||        
T  7420988 caattataactttaattaatattaatttcgttactctctattaaatatattttacttttcatttatgataatggaaaatgcattaatatttgacaagaca 7420889  T
Q  108 ctcaaaactgtttttctctctctttcgcttatactttttt 147  Q
    ||||||| ||||||| |||||||||| |||||| ||||||    
T  7420888 ctcaaaaatgtttttatctctctttcacttatattttttt 7420849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 44024714 - 44024809
Alignment:
Q  8 caattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaa 103  Q
    |||||||||||||||||||||  |||||||| | ||| || |||||||||| |||||| |||||||||||||| | ||||| |||||| |||||||    
T  44024714 caattataactataattaatactattttcatcattcttaactcaatatattctactttgcatttatgataatgagaaatgcatcaatatttgacaa 44024809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 16865052 - 16864951
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||| ||||||||||| |||||||||||| |||||| | || ||||||||||||||  ||||||||||||||| ||||   ||||| |||||||||||    
T  16865052 tttttttcaattataactctaattaatatcactttcatcattcacaattcaatatatttcactttacatttatga-aatggttaatgcatcaatacttga 16864954  T
Q  101 caa 103  Q
    |||    
T  16864953 caa 16864951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 18460477 - 18460551
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatga 75  Q
    |||||||||||||||||| |||||||||| | ||  | |||||||||||||||||||| ||||||||||||||||    
T  18460477 ttttttccaattataactctaattaatattacttctacaactctcaattcaatatattctactttacatttatga 18460551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 1908612 - 1908535
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||| ||||||||||| |||||||||| |||||||  |||  |||||||||||||| |||||||||||||||||||    
T  1908612 tttttttcaattataactctaattaatattattttcaccacttccaattcaatatattctactttacatttatgataa 1908535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 28844048 - 28844125
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    ||||||| |||||||||| |||| ||||  | |||||  |||||||||||||||||||||||||||||||||||||||    
T  28844048 ttttttctaattataactctaataaataatactttcaccactctcaattcaatatattatactttacatttatgataa 28844125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 10069703 - 10069553
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||| |||| |||||| |||||||||  | |||||| |||||||||||||||||||  ||||| ||||||||||||||   |||||   |||||||||    
T  10069703 ttttttacaatgataactctaattaataatactttcatcactctcaattcaatatattcgactttgcatttatgataatggtaaatgcacaaatacttga 10069604  T
Q  101 c-aaagtgctcaaaactgtttttctctctctttcgcttatacttttttctt 150  Q
    | ||||| || ||||   ||||| |||||||||| ||||||  ||||||||    
T  10069603 caaaagtacttaaaatcatttttatctctctttcacttatatatttttctt 10069553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 6723969 - 6723857
Alignment:
Q  9 aattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaagtgc 108  Q
    |||||||||| |||||||||| | |||||| |||| |||||||||| ||| ||||||| ||||||||||||| |||||||  ||||| | ||||||   |    
T  6723969 aattataactctaattaatataactttcatcactc-caattcaataaattctactttatatttatgataatgaggaatgcaccaatattcgacaaaacac 6723871  T
Q  109 tcaaaactgttttt 122  Q
    |||||||| |||||    
T  6723870 tcaaaacttttttt 6723857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 3487390 - 3487482
Alignment:
Q  8 caattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    ||||||| ||| |||||||||| | |||||| ||||||||||||||||||| |||||| ||||| | ||||||   ||||| |||||||||||    
T  3487390 caattattactctaattaatattactttcatcactctcaattcaatatattctactttgcatttgtaataatggtaaatgcatcaatacttga 3487482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 19515870 - 19516001
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    ||||| |||||||||||| |||||||||  | |||||| |||  |||||||||||||| |||||| ||||||||||||||   ||||   ||||||||||    
T  19515870 tttttaccaattataactctaattaatactactttcattacttacaattcaatatattttactttgcatttatgataatgaaaaatgaaccaatacttga 19515969  T
Q  101 caaagtgctcaaaactgtttttctctctctttc 133  Q
    |||    || |||||| ||||||||||||||||    
T  19515970 caagacact-aaaactatttttctctctctttc 19516001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 25604350 - 25604489
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||||||| ||||| | |||||||||| || | ||| |||| |||||||||||||| || ||| ||||||||||||    ||||||  |||||||| |    
T  25604350 ttttttccaactataattctaattaatattatctacattactcccaattcaatatattctaatttgcatttatgataagaaagaatgcaccaatactt-a 25604448  T
Q  101 caaagtgctcaaaactgtttttctctctctttcgcttatac 141  Q
    |||    ||||||||| |||||||||||||||| |||||||    
T  25604449 caagacactcaaaactatttttctctctctttcacttatac 25604489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 28108493 - 28108343
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    ||||||||  |||||||| |||||||||  | |||||| | |||||||||||||||||  ||||||||| ||||||| ||  ||||||  |||||||| |    
T  28108493 ttttttccctttataactctaattaatactactttcatcattctcaattcaatatattccactttacatgtatgatagtggagaatgcaccaatacttaa 28108394  T
Q  101 caaagtg--ctcaaaactgtttttctctctctttcgcttatacttttttctt 150  Q
    | |||||  || |||||| |||||||||||| |||  ||||| |||||||||    
T  28108393 c-aagtgcacttaaaactatttttctctctccttcatttataattttttctt 28108343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 39095621 - 39095717
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatactt 98  Q
    ||||| ||||||||||| |||||||||| | |||||| |||  ||||||||||||||  ||||| ||||||||||||||  |||||  |||||||||    
T  39095621 ttttttcaattataactttaattaatattactttcatcactgacaattcaatatattccactttgcatttatgataatggagaatgtatcaatactt 39095717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 39166813 - 39166737
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    ||||| ||||||| ||| ||||| |||| | |||||  |||| ||||||||||||||||||||||||||||||||||    
T  39166813 ttttttcaattatgactttaatttatattactttcactactcccaattcaatatattatactttacatttatgataa 39166737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 13375298 - 13375231
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattat-actttacatttatgata 77  Q
    |||||||| |||||||||| |||||||| | ||||||||||||||||| | |||||||||||||||||    
T  13375298 ttataactctaattaatattattttcatcattctcaattcaatatattttcactttacatttatgata 13375231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 43182263 - 43182411
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||| ||||||||||| |||||||||  |||||||  |||  ||||||||||||||||||  ||||||||| |||| |  ||||||  ||||| ||||    
T  43182263 tttttttcaattataactttaattaatactattttcaccacttccaattcaatatattatac--tacatttataataaagaagaatgcaccaatatttga 43182360  T
Q  101 caaag-tgctcaaaactgtttttctctctctttcgcttatacttttttctt 150  Q
    |||||   ||||||| | ||||| ||||||||||  |||||| ||||||||    
T  43182361 caaagacactcaaaattatttttttctctctttcctttatacatttttctt 43182411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 44424374 - 44424279
Alignment:
Q  8 caattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaa 103  Q
    ||||||||||| |||||||||  | |||||| | |||||||||||||||||  ||||| |||||||||||||    ||||| ||||||||||||||    
T  44424374 caattataactctaattaatactactttcatcattctcaattcaatatattcaactttgcatttatgataataaaaaatgcatcaatacttgacaa 44424279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 4794562 - 4794640
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataat 79  Q
    |||| ||||||||||||| |||||||||  | |||||| ||| |||||||||||||||  ||||| |||||||||||||    
T  4794562 ttttctccaattataactctaattaatactactttcatcactttcaattcaatatattccactttgcatttatgataat 4794640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 26273749 - 26273827
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatg 80  Q
    ||||| ||||||||| | |||||||||  | |||||| |||| |||||||||||||| |||||| ||||||||||||||    
T  26273749 ttttttcaattataaatttaattaatactactttcatcactcccaattcaatatattctactttgcatttatgataatg 26273827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 3199895 - 3199964
Alignment:
Q  9 aattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||||| |||||||||  | |||||  |||| ||||||||||||||||||||| ||||||||||||    
T  3199895 aattataactctaattaatactactttcaccactcccaattcaatatattatactttgcatttatgataa 3199964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 11726840 - 11726711
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    ||||||| |||||||| | |||||||||  | |||||| ||||| ||||||||||||| |||||| || |||||||| ||  |||||| | ||||| | |    
T  11726840 ttttttctaattataattttaattaatactactttcatcactcttaattcaatatattctactttgcaattatgatagtggagaatgcattaatacataa 11726741  T
Q  101 caa-agtgctcaaaactgtttttctctctc 129  Q
    ||| ||| || |||||| ||||||||||||    
T  11726740 caatagtacttaaaactatttttctctctc 11726711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 37529189 - 37529112
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||| ||||||||||| |||||||||| | |||||  |||  ||||||||| |||| |||||||||||||||||||    
T  37529189 tttttttcaattataactctaattaatattactttcaccacttccaattcaatttattctactttacatttatgataa 37529112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 2756670 - 2756742
Alignment:
Q  8 caattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatg 80  Q
    ||||||||||| |||||||||  |||| ||| |||  ||||| |||||||| |||||||||||||||||||||    
T  2756670 caattataactctaattaatactatttacatcacttccaatttaatatattctactttacatttatgataatg 2756742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 4283098 - 4283038
Alignment:
Q  40 actctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    ||||||||||||||||||| || |||||||||||||||| | |||||||  ||||||||||    
T  4283098 actctcaattcaatatattctattttacatttatgataaagaggaatgcaccaatacttga 4283038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 7213474 - 7213614
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaa-gtgct 109  Q
    |||||||| |||||||||  | ||||| ||||||||||||||||||||  ||||||||||||| |||| |  ||||||  ||||| |||| ||| |  ||    
T  7213474 ttataactctaattaatactactttcacaactctcaattcaatatattccactttacatttataataaagaagaatgcaccaatatttgataaaggcact 7213573  T
Q  110 caaaactgtttttctctctctttcgcttatacttttttctt 150  Q
    |||||   ||||||||||| ||||  |||||| ||||||||    
T  7213574 caaaatcatttttctctctatttcatttatacatttttctt 7213614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 28301423 - 28301499
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    ||||||||  |||||||| |||||||||  | |||||| |||||||||||||||||||  ||||| |||||||||||    
T  28301423 ttttttccttttataactctaattaatactactttcatcactctcaattcaatatatttcactttgcatttatgata 28301499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 37248002 - 37247926
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    ||||||||  |||||||| |||||||||| | |||||| || ||||||||||||||||  ||||| |||||||||||    
T  37248002 ttttttccctttataactctaattaatattactttcatcacactcaattcaatatatttcactttgcatttatgata 37247926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 734129 - 734027
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    ||||||| |||||||||| |||| ||||| | |||||| |||| ||| |||||||||| |||| |||||||||||||||   ||||||  ||||| ||||    
T  734129 ttttttctaattataactctaat-aatattactttcatcactcccaactcaatatattttactatacatttatgataatagtgaatgcaccaatatttga 734031  T
Q  101 caaa 104  Q
    ||||    
T  734030 caaa 734027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 6213968 - 6213889
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatg 80  Q
    |||||| ||||| ||||| |||||||||  | |||||| ||||| |||| |||||||| |||||| ||||||||||||||    
T  6213968 tttttttcaattttaactttaattaatactactttcatcactcttaattgaatatattctactttgcatttatgataatg 6213889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 10818610 - 10818761
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    ||||||||  |||||||| |||||||||||| |||||| ||||  ||||||||| |||  ||||| ||||||||||| |   ||||||  |||||||| |    
T  10818610 ttttttccctttataactctaattaatatcactttcatcactcctaattcaatacatttcactttgcatttatgatactagagaatgcaccaatacttaa 10818709  T
Q  101 caa-agtgctcaaaactgtttttctctctctttcg-cttatacttttttctt 150  Q
    ||| |||||  |||||  |||||||||||| ||||  |||||| ||||||||    
T  10818710 caagagtgcataaaaccatttttctctctccttcgttttatacatttttctt 10818761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 140
Target Start/End: Original strand, 40710598 - 40710705
Alignment:
Q  33 tttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaagtgctcaaaactgtttttctctctcttt 132  Q
    |||||| ||||||||||||||||||  |||||| ||| |||||||| |  ||||||   |||| ||||||||   ||||||||| ||||||||||| |||    
T  40710598 tttcatcactctcaattcaatatatgctactttgcatgtatgataaggaagaatgcacgaatatttgacaaaacactcaaaactatttttctctcttttt 40710697  T
Q  133 cgcttata 140  Q
    | ||||||    
T  40710698 cacttata 40710705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 6972651 - 6972581
Alignment:
Q  8 caattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    ||||||||||  |||||||||| | ||| |  ||||||||||||||||||| |||||| ||||||||||||    
T  6972651 caattataacactaattaatattacttttaccactctcaattcaatatattctactttgcatttatgataa 6972581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 18181331 - 18181181
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    ||||||| |||||||||| |||||||||  | |||||| | || |||||||| ||||| |||||| ||||||||||| ||  ||||||  |||||| | |    
T  18181331 ttttttctaattataactctaattaatactactttcattattcccaattcaaaatattctactttgcatttatgatagtggagaatgcaccaatacataa 18181232  T
Q  101 c-aaagtgctcaaaactgtttttctctctctttcgcttatacttttttctt 150  Q
    | ||||  || |||||  ||||||||||||| || |||||||  |||||||    
T  18181231 caaaagcacttaaaaccatttttctctctctctcacttatacacttttctt 18181181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 23684958 - 23685024
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    |||||||| |||||||||  | |||||| |||||||||||||||||||  ||||| |||||||||||    
T  23684958 ttataactctaattaatactactttcatcactctcaattcaatatatttcactttgcatttatgata 23685024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 45 - 79
Target Start/End: Original strand, 43056408 - 43056442
Alignment:
Q  45 caattcaatatattatactttacatttatgataat 79  Q
    |||||||||||||||||||||||||||||||||||    
T  43056408 caattcaatatattatactttacatttatgataat 43056442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 43077844 - 43077770
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatga 75  Q
    ||||||||  |||||||| |||||||||| | |||||| | | |||||||||||||||  |||||||||||||||    
T  43077844 ttttttccttttataactctaattaatattactttcatcattttcaattcaatatatttcactttacatttatga 43077770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 13222057 - 13222134
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||| ||||||||||  |||||||||| | |||||  |||  |||||||||||||| |||||| ||||||||||||    
T  13222057 tttttttcaattataacactaattaatattactttcaccacttccaattcaatatattttactttgcatttatgataa 13222134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 41436078 - 41436171
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaa 104  Q
    |||||||| |||||||||  | |||||| | |||||||||||||||||  ||||| ||||||||||| ||  |||| | ||||||||| |||||    
T  41436078 ttataactctaattaatactactttcatcattctcaattcaatatattccactttgcatttatgatagtgaagaatacatcaatacttaacaaa 41436171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 43427200 - 43427127
Alignment:
Q  5 ttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||||||||  |||||||||  | |||||| |||| |||||||||||||| || ||| ||||||||||||    
T  43427200 ttccaattataacactaattaatactactttcatcactcccaattcaatatattctattttgcatttatgataa 43427127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 435184 - 435120
Alignment:
Q  13 ataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    |||||| |||||||||  | |||||| | |||||||||||||||||  |||||||||||||||||    
T  435184 ataactttaattaatactactttcatcattctcaattcaatatatttcactttacatttatgata 435120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 6075487 - 6075551
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatacttt 65  Q
    |||||||||||||||||| |||||||||  | |||||| |||| ||||| |||||||| ||||||    
T  6075487 ttttttccaattataactctaattaatactactttcatcactcccaatttaatatattctacttt 6075551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 8385066 - 8385166
Alignment:
Q  3 ttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgaca 102  Q
    |||| ||||||||||| |||||| |   | |||||| | | ||| |||||||||||||| |||||||||||||||||| | ||||   ||||||||||||    
T  8385066 tttttcaattataactttaattatttctactttcatcattttcagttcaatatattatattttacatttatgataatgagaaatgaaacaatacttgaca 8385165  T
Q  103 a 103  Q
    |    
T  8385166 a 8385166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 28925966 - 28925816
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    ||||||||  |||||||| |||||||||   |||| || | || ||||||||||||||  |||||||| |||||||| ||  |||||| ||||||||| |    
T  28925966 ttttttccctttataactctaattaatactgttttgatcattcccaattcaatatatttcactttacaattatgatagtggagaatgcatcaatacttaa 28925867  T
Q  101 caaagtg--ctcaaaactgtttttctctctctttcgcttatacttttttctt 150  Q
    | |||||  || |||||| |||||||||||| ||   |||||| ||||||||    
T  28925866 c-aagtgcacttaaaactatttttctctctcctttatttatacatttttctt 28925816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 9724911 - 9724966
Alignment:
Q  45 caattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||||||||||| ||||||||||||||||||| |  ||||||  ||||||||||    
T  9724911 caattcaatatattctactttacatttatgataaagaagaatgcaccaatacttga 9724966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 45 - 80
Target Start/End: Original strand, 9912472 - 9912507
Alignment:
Q  45 caattcaatatattatactttacatttatgataatg 80  Q
    ||||||||||||||||| ||||||||||||||||||    
T  9912472 caattcaatatattatattttacatttatgataatg 9912507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 37028747 - 37028826
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatg 80  Q
    ||||||| | |||||||| |||||||||| | |||||| ||| ||| ||||  |||||  ||||||||||||||||||||    
T  37028747 ttttttctatttataactctaattaatattactttcatcactttcagttcataatatttcactttacatttatgataatg 37028826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 141
Target Start/End: Original strand, 314459 - 314557
Alignment:
Q  44 tcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaa-agtgctcaaaactgtttttctctctctttcgcttatac 141  Q
    ||||||||||||||| |||||| |||||||||||| |  |||||| |||||| |||| ||  |  ||||||||  |||| ||||||||||| |||||||    
T  314459 tcaattcaatatattctactttgcatttatgataaagaagaatgcatcaatagttgataagggcactcaaaaccattttcctctctctttcacttatac 314557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 2427349 - 2427423
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatga 75  Q
    |||||||||||||||||   ||||||||  | |||||  |||| |||||||||||||| |||||| |||||||||    
T  2427349 ttttttccaattataacatcaattaatactactttcaccactcccaattcaatatattctactttgcatttatga 2427423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 7650093 - 7649991
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    ||||||||  |||||||| |||||||||  || ||||| | | |||||||||||||||  ||||| ||||||||||| ||  |||||| ||| ||||| |    
T  7650093 ttttttccttttataactctaattaatactatcttcatcattttcaattcaatatattccactttgcatttatgatagtggagaatgcatcagtacttaa 7649994  T
Q  101 caa 103  Q
    |||    
T  7649993 caa 7649991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 33602347 - 33602293
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatat 55  Q
    ||||||| |||||||||| |||||||| | | |||||| ||||||||||||||||    
T  33602347 ttttttctaattataactctaattaatgttactttcatcactctcaattcaatat 33602293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 33880148 - 33880214
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttaca 68  Q
    |||||||  |||||||| |||||||||| | |||||  |||| |||||||||||||| |||||||||    
T  33880148 tttttccctttataactctaattaatattactttcaccactcccaattcaatatattctactttaca 33880214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 150
Target Start/End: Original strand, 36748169 - 36748287
Alignment:
Q  33 tttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaa-gtgctcaaaactgtttttctctctctt 131  Q
    ||||| || ||||||||||||||||| ||||||| ||||||||||| |   || ||  |||||||||| ||| |  ||||||||| ||||||||||| ||    
T  36748169 tttcacaattctcaattcaatatattttactttaaatttatgataaagaataacgcaccaatacttgaaaaaggaactcaaaactatttttctctctatt 36748268  T
Q  132 tcgcttatacttttttctt 150  Q
    ||  ||||||  |||||||    
T  36748269 tcttttatacacttttctt 36748287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 44736708 - 44736765
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatatt 58  Q
    |||||||||||||||||| |||||||||  | ||| || |||||| ||||||||||||    
T  44736708 ttttttccaattataactctaattaatactacttttatcactctcgattcaatatatt 44736765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 7648983 - 7648911
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatg 74  Q
    |||||||  |||||| | |||||||||  |||||||| |||| ||||||||||||||  || |||||||||||    
T  7648983 tttttccctttataattctaattaatactattttcatcactcccaattcaatatatttcacattacatttatg 7648911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 8031740 - 8031832
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaa 103  Q
    |||||||| |||||||||  | ||| || | || ||||||||||||||  ||||| ||||||||||||||  |||| | ||||||||| ||||    
T  8031740 ttataactttaattaatactacttttatcattcacaattcaatatatttaactttgcatttatgataatggagaatacatcaatacttaacaa 8031832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 13538355 - 13538311
Alignment:
Q  33 tttcataactctcaattcaatatattatactttacatttatgata 77  Q
    |||||| |||||||||||||||| ||  |||||||||||||||||    
T  13538355 tttcatcactctcaattcaatatcttccactttacatttatgata 13538311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 2e-26; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 55360466 - 55360362
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||| ||||||||||| |||||||||| | |||||| ||||||||||||||||||| ||||||||||||||||||| |  ||||||  ||||||||||    
T  55360466 tttttttcaattataactctaattaatattactttcatcactctcaattcaatatattgtactttacatttatgataaagaagaatgcgccaatacttga 55360367  T
Q  101 caaag 105  Q
    |||||    
T  55360366 caaag 55360362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 22872506 - 22872403
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||||||||||||||| |||||||||| | |||||| |||||||||||||||||||  ||||| ||||||||||||||  ||||||  ||||||||||    
T  22872506 ttttttccaattataactctaattaatattactttcatcactctcaattcaatatattccactttgcatttatgataatggagaatgcaccaatacttga 22872407  T
Q  101 caaa 104  Q
    ||||    
T  22872406 caaa 22872403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 150
Target Start/End: Original strand, 49448838 - 49448980
Alignment:
Q  9 aattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaa-agtg 107  Q
    |||||||||| |||||||||  | |||||| | |||||||||||||||||||||||| |||||||||||||   ||||||   |||||||||||| ||      
T  49448838 aattataactctaattaatactactttcatcattctcaattcaatatattatactttgcatttatgataatagagaatgcacaaatacttgacaagagca 49448937  T
Q  108 ctcaaaactgtttttctctctctttcgcttatacttttttctt 150  Q
    || |||||  |||||||||||| ||| ||||||| ||||||||    
T  49448938 cttaaaaccatttttctctctccttcacttatacatttttctt 49448980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 32949967 - 32949890
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||||||||| ||  |||||||||| |||||||  ||||||||||||||||||| |||||||||||||||||||    
T  32949967 ttttttccaattattacactaattaatattattttcactactctcaattcaatatattctactttacatttatgataa 32949890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 180
Target Start/End: Complemental strand, 29990583 - 29990411
Alignment:
Q  8 caattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaagtg 107  Q
    ||||||||||| |||||||||  |||||  | ||| |||||||||||||||  |||||| ||||||||||     |||||| ||||||||||||||        
T  29990583 caattataactttaattaatactatttttttcactttcaattcaatatattcaactttatatttatgatatgaaagaatgcatcaatacttgacaagaca 29990484  T
Q  108 ctcaaaactgtttttctctctctttcgcttatacttttttcttcttaatatgtgcaaaatgaataaaagactc 180  Q
    |||||| || ||||| |||||||||| ||||||| |||||  ||||||||| ||  ||||||| |||||||||    
T  29990483 ctcaaatctatttttttctctctttcacttatacattttttatcttaatatatgtgaaatgaacaaaagactc 29990411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 38160270 - 38160166
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||| ||||||||||| |||||||||| | ||| || |||||||||||||||||||  |||||  |||||||||||||  |||||| |||||| ||||    
T  38160270 tttttttcaattataactctaattaatattacttttatcactctcaattcaatatatttcactttgtatttatgataatggagaatgcatcaatatttga 38160171  T
Q  101 caaag 105  Q
    |||||    
T  38160170 caaag 38160166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 47277799 - 47277723
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||| ||||||||||||||||||||  | ||| || ||||||||||||||||||| |||||||||||||||||||    
T  47277799 tttttcaaattataactataattaatactactttaatcactctcaattcaatatattttactttacatttatgataa 47277723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 48400730 - 48400650
Alignment:
Q  20 taattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||| |  |||| | |||||||||||    
T  48400730 taattaatatcactttcacaactctcaattcaatatattctactttacatttatgataaagaagaatacatcaatacttga 48400650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 5499547 - 5499372
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||| ||||||| ||| |||||||||| | |||||| ||||  ||||||||||||| || ||| ||| ||||||||   ||||||| |||||| ||||    
T  5499547 tttttttcaattatgactctaattaatattactttcatcactcctaattcaatatattctattttgcatctatgataagaaggaatgcatcaatatttga 5499448  T
Q  101 caaagtgctcaaaactgtttttctctctctttcgcttatacttttttcttcttaatatgtgcaaaatgaataaaagactcg 181  Q
    || |   ||||||||| ||||||| |||||||| |||||||  |||  |||||||||||||  ||||||| ||||| ||||    
T  5499447 caca---ctcaaaactatttttctttctctttcacttatacacttt--ttcttaatatgtgtcaaatgaacaaaaggctcg 5499372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 27977136 - 27977239
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||||| ||||||||| |||||||||||| |||||| |||||||||||||||||||  ||||| ||||||| ||| ||  ||||||  |||||||| |    
T  27977136 ttttttcctattataactctaattaatatcactttcatcactctcaattcaatatattccactttgcatttataatagtggagaatgcaccaatacttaa 27977235  T
Q  101 caaa 104  Q
    ||||    
T  27977236 caaa 27977239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 25149440 - 25149573
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataat-gtggaatgcctcaatacttg 99  Q
    |||||||||||||||||| |||||||||  | ||||| ||||  ||||||||||||||  ||||||||||||||||||  | |||||||  ||||||||     
T  25149440 ttttttccaattataactctaattaatactactttcacaacttccaattcaatatattccactttacatttatgataaaagaggaatgcaccaatactta 25149539  T
Q  100 acaaagtg-ctcaaaactgtttttctctctcttt 132  Q
    | ||||   ||||||||| |||||||||||||||    
T  25149540 aaaaaggcactcaaaactatttttctctctcttt 25149573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 150
Target Start/End: Complemental strand, 29550844 - 29550695
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgac 101  Q
    ||||| ||||||||||| |||||||||  | ||||| ||||| |||||||||||||| ||||||||||||||||||| |    |  | ||||||||| |     
T  29550844 ttttttcaattataactctaattaatactactttcacaactcccaattcaatatattctactttacatttatgataaagaatgaaacatcaatacttaaa 29550745  T
Q  102 aaa-gtgctcaaaactgtttttctctctctttcgcttatacttttttctt 150  Q
    ||| |  ||||||||| ||||||||||||||||  |||||| ||||||||    
T  29550744 aaaggcactcaaaactatttttctctctctttcctttatacatttttctt 29550695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 38319900 - 38319977
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||||||||||||  |||||||||  | |||||| ||||||||||||||||||| |||||| ||||||||||||    
T  38319900 ttttttccaattataacactaattaatactactttcatcactctcaattcaatatattctactttgcatttatgataa 38319977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 29644344 - 29644420
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    ||||||||  ||||||||||||||||||  | |||||| | ||||||||||||||||| ||||||||||||||||||    
T  29644344 ttttttccttttataactataattaatactactttcatcattctcaattcaatatattctactttacatttatgata 29644420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 39053019 - 39052915
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    ||||||||  |||||||| |||||||||  | |||||  ||||||||||||||||||| ||||||||||||||||||| |  ||||||  ||||||||||    
T  39053019 ttttttccttttataactctaattaatactactttcaccactctcaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttga 39052920  T
Q  101 caaag 105  Q
     ||||    
T  39052919 taaag 39052915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 44633146 - 44633277
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||||||||||||||| |||||||||  | |||||  ||| |||||||||||| || |||||||||||||| |||| |  ||||||  ||||||||||    
T  44633146 ttttttccaattataactctaattaatactactttcaccactttcaattcaatat-ttctactttacatttatcataaagaagaatgcaccaatacttga 44633244  T
Q  101 caaag-tgctcaaaactgtttttctctctcttt 132  Q
    |||||   ||||||||| ||||||||| |||||    
T  44633245 caaagacactcaaaactatttttctctttcttt 44633277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 4354437 - 4354514
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||| |||||||||||||||||||||||  | ||||| ||||||||||| |||||||| ||  |||||||||||||||    
T  4354437 ttttctccaattataactataattaatactactttcacaactctcaatttaatatattctaaattacatttatgataa 4354514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 10099843 - 10099766
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||| ||||||||||| |||||||||  | ||||| ||||| |||||||||||||| ||||||| |||||||||||    
T  10099843 tttttttcaattataactctaattaatactactttcacaactcccaattcaatatattctactttaaatttatgataa 10099766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 36047218 - 36047141
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||||| ||||||  |||||||||| | |||||  ||||||||||||||||||| |||||| ||||||||||||    
T  36047218 ttttttccaactataacattaattaatattactttcaccactctcaattcaatatattctactttgcatttatgataa 36047141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 49218900 - 49218823
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||| ||||||||||  |||||||||| | |||||  ||||||||||||||||||||||||||  |||||||||||    
T  49218900 tttttttcaattataacattaattaatattactttcaccactctcaattcaatatattatactttgaatttatgataa 49218823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 54217331 - 54217408
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||||||||||||  ||||||||| || |||||  |||| ||||||||||||||||||||| || |||||||||    
T  54217331 ttttttccaattataacattaattaataccactttcaccactcccaattcaatatattatactttgcagttatgataa 54217408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 35998234 - 35998158
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||  |||||||| |||||||||  | |||||  ||||||||||||||||||| |||||||||||||||||||    
T  35998234 tttttccctttataactctaattaatactactttcaccactctcaattcaatatattttactttacatttatgataa 35998158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 37309697 - 37309789
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaa 103  Q
    |||||||| |||||||||| | |||||| |||||||||||||||||||  ||||| ||||||||||| |   |||||| ||||||||| ||||    
T  37309697 ttataactctaattaatattactttcatcactctcaattcaatatatttaactttgcatttatgatagtagagaatgcatcaatacttaacaa 37309789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 30568665 - 30568724
Alignment:
Q  18 tataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    |||||||||||| |||||||| |||||||||||||||||||  ||||| |||||||||||    
T  30568665 tataattaatattattttcatcactctcaattcaatatatttcactttgcatttatgata 30568724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 42132802 - 42132896
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaata 95  Q
    |||||||||||||||||  |||||||||| | |||||  |||  |||||||||||||| |||||| |||||||||||| |  |||||| ||||||    
T  42132802 ttttttccaattataacactaattaatattactttcaccacttccaattcaatatattctactttgcatttatgataaagaagaatgcatcaata 42132896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 3505711 - 3505788
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||| ||||||||||| ||||||||   | |||||  | ||||||||||||||||| |||||||||||||||||||    
T  3505711 tttttttcaattataactctaattaatcatactttcactaatctcaattcaatatattctactttacatttatgataa 3505788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 3686010 - 3686103
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaa 104  Q
    |||||||| |||||||||| | |||||| |||||||||||||||||||  ||||| ||||||| ||| ||  ||||||  |||||||| |||||    
T  3686010 ttataactctaattaatattactttcatcactctcaattcaatatattcaactttgcatttataatagtggagaatgcaccaatacttaacaaa 3686103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 8759768 - 8759845
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    ||||||||| |||||||  |||||||||  | ||||| ||||| |||||||||||||| |||||| ||||||||||||    
T  8759768 ttttttccacttataacactaattaataataatttcacaactcccaattcaatatattctactttgcatttatgataa 8759845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 11583981 - 11583912
Alignment:
Q  9 aattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||||  |||||||||| | |||||| |||||||||| |||||||| |||||||||||||| ||||    
T  11583981 aattataacattaattaatattactttcatcactctcaatttaatatattttactttacatttataataa 11583912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 22020628 - 22020551
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||||||||||||| |||||| ||  | |||||  | ||||||||||||||||| |||||| ||||||||||||    
T  22020628 ttttttccaattataactctaattattactactttcaccattctcaattcaatatattctactttgcatttatgataa 22020551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 49401652 - 49401795
Alignment:
Q  8 caattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaagtg 107  Q
    ||||||| ||| ||||||||| || |||||||| |  |||||||||||||| |||||||||||||| |||| |   ||||  ||||||||||| ||||      
T  49401652 caattatgactctaattaataccactttcataatttccaattcaatatattctactttacatttataataaagaacaatgtatcaatacttga-aaagga 49401750  T
Q  108 c--tcaaaactgtttttctctctctttcgcttatacttttttctt 150  Q
    |  |||||||| |||||||||||||||   |||||| ||||||||    
T  49401751 cattcaaaactatttttctctctctttactttatacatttttctt 49401795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 52677117 - 52677052
Alignment:
Q  33 tttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatactt 98  Q
    |||||| |||||||||| |||||||| |||||||||||||||||||||   ||||| |||||||||    
T  52677117 tttcatcactctcaatttaatatattttactttacatttatgataatgataaatgcatcaatactt 52677052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 1825356 - 1825292
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatga 75  Q
    |||||||| |||||||||| |||||||| | | |||||||||||||||  |||||||||||||||    
T  1825356 ttataactctaattaatattattttcatcattttcaattcaatatattccactttacatttatga 1825292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 41710262 - 41710186
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    ||||||||  |||||||| |||||||||| | |||||| |||| ||||||||||||||  ||||| |||||||||||    
T  41710262 ttttttccctttataactctaattaatattactttcatcactcccaattcaatatattccactttgcatttatgata 41710186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 9052168 - 9052089
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatg 80  Q
    |||||||||||||||||  |||||||||  | |||||| | ||| ||||||||||||| ||||| |||||||| ||||||    
T  9052168 ttttttccaattataacactaattaatactactttcatcattctgaattcaatatattctacttaacatttataataatg 9052089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 175
Target Start/End: Original strand, 13529859 - 13530023
Alignment:
Q  9 aattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaagtgc 108  Q
    |||||||| | |||||| ||  |||||||| ||||  ||||| |||| || |||||||||||||| |||| |   |||||  ||||| || ||||    |    
T  13529859 aattataattttaattagtactattttcatcactcctaattcgatatgttctactttacatttatcataagggaaaatgcaccaatagttcacaagacac 13529958  T
Q  109 tcaaaactgtttttctctctctttcgcttatacttttttcttcttaatatgtgcaaaatgaataaaa 175  Q
    |||||||  |||||||||||||||||||| ||| ||||  |||||||||||||  ||||||||||||    
T  13529959 tcaaaaccatttttctctctctttcgcttgtacatttt--ttcttaatatgtgtgaaatgaataaaa 13530023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 105
Target Start/End: Complemental strand, 21954535 - 21954444
Alignment:
Q  14 taactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaag 105  Q
    |||||||||||||||  | |||||| | || ||||||| |||||| |||||||||||||||||||   | ||||| ||||||| ||||||||    
T  21954535 taactataattaatacaactttcatcattcacaattcagtatattttactttacatttatgataagaagaaatgcatcaatacatgacaaag 21954444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 37786958 - 37787053
Alignment:
Q  9 aattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaa 104  Q
    |||||||| | |||||||||| |||||||  ||| |||||| |||||||| || |||||||||||| ||| |  |||||| ||| |||||||||||    
T  37786958 aattataattttaattaatattattttcaccactttcaatttaatatattctattttacatttatggtaaagaagaatgcatcactacttgacaaa 37787053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 4360526 - 4360376
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||||||| ||||||| |||||||||  | |||||| | || ||||||||||||||  ||||| |||||||| || ||  ||||||  |||||||| |    
T  4360526 ttttttccaaatataactctaattaatactactttcatcattcacaattcaatatattccactttgcatttatgctagtggagaatgcaccaatacttaa 4360427  T
Q  101 c-aaagtgctcaaaactgtttttctctctctttcgcttatacttttttctt 150  Q
    | ||||  || |||||  ||||||||| || |||  |||||||||||||||    
T  4360426 caaaagcacttaaaaccatttttctctttcattcatttatacttttttctt 4360376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 18849877 - 18849775
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    ||||||||  |||||||| |||||||||| | ||||| ||||  ||||||||||||||  ||||| ||||||||||| ||  ||||||  |||||||| |    
T  18849877 ttttttccctttataactctaattaatattactttcacaacttccaattcaatatatttcactttgcatttatgatagtggagaatgcaccaatacttaa 18849778  T
Q  101 caa 103  Q
    |||    
T  18849777 caa 18849775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 32323661 - 32323719
Alignment:
Q  9 aattataactataattaatatcattttcataactctcaattcaatatattatactttac 67  Q
    ||||||||||  ||| ||||| ||||| || ||||||||||||||||||||||||||||    
T  32323661 aattataacttcaatgaatattattttaatcactctcaattcaatatattatactttac 32323719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 42051774 - 42051676
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttg 99  Q
    |||||| ||||||||| | |||||| ||| |||||||  |||  ||||||| |||||| ||||||||||||||||||| |  ||||||  |||||||||    
T  42051774 tttttttcaattataattctaattattattattttcaccacttccaattcattatattctactttacatttatgataaagaagaatgcaccaatacttg 42051676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 54729601 - 54729440
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    ||||||||  |||||||| |||||||||  | |||||| || ||||||||||||||||  ||||| ||||||||||| ||  |||| |   ||||||| |    
T  54729601 ttttttccctttataactctaattaatactactttcatcac-ctcaattcaatatattccactttgcatttatgatagtggagaatacactaatacttaa 54729503  T
Q  101 c-aaagtgctcaaaactgtttttctctctctttcgcttatacttttttc-ttcttaatatgtg 161  Q
    | |||   || |||||| ||||||||||||||||  |||||| |||||| |||||||||||||    
T  54729502 caaaaacacttaaaactatttttctctctctttcatttatacatttttctttcttaatatgtg 54729440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 4357557 - 4357614
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatatt 58  Q
    ||||||||| |||||||| |||||||||  |||||||| |||| ||||||||||||||    
T  4357557 ttttttccatttataactctaattaatactattttcatcactcccaattcaatatatt 4357614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 18509446 - 18509499
Alignment:
Q  12 tataactataattaatatcattttcataactctcaattcaatatattatacttt 65  Q
    |||||||||||||||||  | |||||| |||| |||||||||||||||||||||    
T  18509446 tataactataattaataatactttcatcactcccaattcaatatattatacttt 18509499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 34021024 - 34021102
Alignment:
Q  1 ttttttccaattataactataattaatatcatt---ttcataactctcaattcaatatattatactttacatttatgata 77  Q
    ||||||||  |||||||| |||||||||| |||   ||||| |||||||||||||||||||| ||||| |||||||||||    
T  34021024 ttttttccctttataactctaattaatat-attaccttcatcactctcaattcaatatattagactttgcatttatgata 34021102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 42185914 - 42185857
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatatt 58  Q
    ||||||||| |||||||| |||||||||  | |||||| |||||||||||||||||||    
T  42185914 ttttttccatttataactctaattaatactactttcatcactctcaattcaatatatt 42185857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 46958711 - 46958788
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||||||||||| |  ||||||||  | ||| || ||||||||||||||||||| |||||| | ||||||||||    
T  46958711 ttttttccaattataattcaaattaatactactttaatcactctcaattcaatatattctactttgcgtttatgataa 46958788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 53848667 - 53848712
Alignment:
Q  33 tttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||| ||||||||||||||||||| |||||| ||||||||||||    
T  53848667 tttcatcactctcaattcaatatattctactttgcatttatgataa 53848712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 17237032 - 17237108
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    |||||| ||||||||||| |||||||||  | ||||||  || |||||||||||||||  ||||| |||||||||||    
T  17237032 tttttttcaattataactctaattaatactactttcatcgctttcaattcaatatattccactttgcatttatgata 17237108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 25250705 - 25250633
Alignment:
Q  7 ccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataat 79  Q
    |||||||||||| |||||||||  | |||||| ||||| |||| |||||||| |||| | |||||||||||||    
T  25250705 ccaattataactctaattaatactagtttcatcactcttaatttaatatattctactatgcatttatgataat 25250633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 37316039 - 37315963
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    ||||||||||||||||  |||||||||  | |||||  |||| |||||||| ||||| |||||| ||||||||||||    
T  37316039 tttttccaattataacactaattaatactactttcaccactcccaattcaacatattctactttgcatttatgataa 37315963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 38976980 - 38977056
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    ||||||||  |||||||| |||||||||  | |||||| | | |||||||||||||||  |||||||||||||||||    
T  38976980 ttttttccctttataactctaattaatactactttcatcattttcaattcaatatattccactttacatttatgata 38977056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 39258390 - 39258314
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    ||||||||  |||||||| |||||||||  | |||||| |||||||||| ||||||||  | |||||||||||||||    
T  39258390 ttttttccctttataactttaattaataatactttcatcactctcaatttaatatattccattttacatttatgata 39258314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 41436470 - 41436546
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    ||||||| |||||||||| |||||||||  | |||||| | || |||||||| ||||| |||||| |||||||||||    
T  41436470 ttttttctaattataactctaattaatactactttcatcattcgcaattcaaaatattctactttgcatttatgata 41436546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 51527408 - 51527483
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    ||||||||  |||||||| |||||||||| |||| ||| | | |||||||||||||||  |||||||||||||||||    
T  51527408 ttttttccttttataactctaattaatattattt-catcattttcaattcaatatatttcactttacatttatgata 51527483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 51572338 - 51572270
Alignment:
Q  9 aattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    |||||||||| |||||||||  | ||| || |||  ||||||||||||||| |||||||||||||||||    
T  51572338 aattataactctaattaatactacttttatcacttccaattcaatatattacactttacatttatgata 51572270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 29136907 - 29136764
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||| ||||||||||| |||||||||  |||||  | ||||  |||||||||| ||  ||||| |||||||||||| |  ||||||  |  |||||||    
T  29136907 tttttttcaattataactctaattaataatattttagtcactccaaattcaatatcttccactttgcatttatgataaaggtgaatgcacccgtacttga 29136808  T
Q  101 c-aaagtgctcaaaactgtttttctctctctttcgcttatactt 143  Q
    | ||| |||| |||||  |||||||||||| ||| |||||||||    
T  29136807 caaaaatgcttaaaaccatttttctctctcattcacttatactt 29136764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 47846889 - 47846964
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    |||||| |||||||||| |||||||||  | |||||| ||||  |||||||||||||  ||||| |||||||||||    
T  47846889 tttttctaattataactctaattaatactactttcatcactcctaattcaatatatttcactttgcatttatgata 47846964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 78
Target Start/End: Original strand, 13719811 - 13719841
Alignment:
Q  48 ttcaatatattatactttacatttatgataa 78  Q
    |||||||||||||||||||||||||||||||    
T  13719811 ttcaatatattatactttacatttatgataa 13719841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 26799324 - 26799258
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    |||||||| |||||||||  | |||||| | ||||||||||||||||| || ||| |||||||||||    
T  26799324 ttataactctaattaatagtactttcatcattctcaattcaatatattctattttgcatttatgata 26799258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 28279826 - 28279976
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||| ||||||||||| |||||||||  |||||||   ||  ||||| |||||||| ||||||| ||||||||||| |   |||||  |||||||| |    
T  28279826 tttttttcaattataactctaattaatactattttcactgcttccaattaaatatattctactttatatttatgataaagaaaaatgcaccaatacttaa 28279925  T
Q  101 caaag-tgctcaaaactgtttttctctctctttcgcttatacttttttctt 150  Q
    |||||   ||||||||| ||| ||| |||||||   |||||| ||||||||    
T  28279926 caaagacactcaaaactatttctctttctcttttctttatacatttttctt 28279976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 78
Target Start/End: Complemental strand, 33093538 - 33093500
Alignment:
Q  40 actctcaattcaatatattatactttacatttatgataa 78  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  33093538 actctcaattcaatatatcctactttacatttatgataa 33093500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 39979779 - 39979845
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    |||||||| |||||||||| | |||||| | |  ||||||||||||||  |||||||||||||||||    
T  39979779 ttataactctaattaatattactttcatcatttccaattcaatatattccactttacatttatgata 39979845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 42544208 - 42544274
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    |||||||| |||||||||| | ||| || |||| ||||||||||||||  ||||| |||||||||||    
T  42544208 ttataactctaattaatattacttttatcactcacaattcaatatattccactttgcatttatgata 42544274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 51076532 - 51076452
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatatt---atactttacatttatgataa 78  Q
    |||||| ||||||||||| |||||||||| | ||| || |||||||||| ||||||||    |||||||||||| ||||||    
T  51076532 tttttttcaattataactctaattaatattaattttatcactctcaatttaatatattttagtactttacatttgtgataa 51076452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 80
Target Start/End: Complemental strand, 25125148 - 25125115
Alignment:
Q  47 attcaatatattatactttacatttatgataatg 80  Q
    |||||||||||| |||||||||||||||||||||    
T  25125148 attcaatatattttactttacatttatgataatg 25125115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 28330783 - 28330860
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||| ||||||||||  |||||||||| | |||||  |||| |||||||||||| | | |||| ||||||||||||    
T  28330783 tttttttcaattataacactaattaatattactttcaccactcccaattcaatataatctgctttgcatttatgataa 28330860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 103
Target Start/End: Complemental strand, 50328148 - 50328087
Alignment:
Q  42 tctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaa 103  Q
    |||||||||||||||||  ||||| ||||||||||| ||  ||||||  |||||||||||||    
T  50328148 tctcaattcaatatatttcactttgcatttatgatagtggtgaatgcaccaatacttgacaa 50328087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 42024319 - 42024247
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttat 73  Q
    ||||||||  ||||||||||||||||||  | |||||| |||  ||||||||||||||  ||||| |||||||    
T  42024319 ttttttccctttataactataattaatactactttcatcacttccaattcaatatattccactttgcatttat 42024247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 43335134 - 43335070
Alignment:
Q  8 caattataactataattaatatcattttcataactctcaattcaatatattatactttacattta 72  Q
    ||||||| |||||||||||||  | |||| | |||||||||||||||||||  ||||| ||||||    
T  43335134 caattatgactataattaatactactttcttcactctcaattcaatatattccactttccattta 43335070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 48740509 - 48740585
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    ||||||||  |||||||| |||||||||| | ||| || | | | |||||||||||||  |||||||||||||||||    
T  48740509 ttttttccctttataactctaattaatattacttttatcatttttaattcaatatattccactttacatttatgata 48740585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 49812218 - 49812294
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    ||||||||  |||||||| |||||||||  ||||||||   || |||| |||||||||  |||||||||||||||||    
T  49812218 ttttttccctttataactctaattaatactattttcatctttcccaatacaatatattccactttacatttatgata 49812294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 3e-25; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 2849244 - 2849394
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||| ||||||||| | |||||||||  | |||||  ||||||||||||||||||| ||||||||||||||||||| |  ||||||  ||||||||||    
T  2849244 tttttttcaattataattctaattaatactactttcaccactctcaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttga 2849343  T
Q  101 caaag-tgctcaaaactgtttttctctctctttcgcttatacttttttctt 150  Q
    |||||   | ||||||| ||||||||||||||||  |||||| ||||||||    
T  2849344 caaagacacgcaaaactatttttctctctctttcatttatacatttttctt 2849394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 28333160 - 28333292
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||||||| ||||||| |||||||||| | |||||| |||| |||||||||||||| |||||||||||||||||||     ||||| ||||||||| |    
T  28333160 ttttttccaaatataactctaattaatattactttcatcactcccaattcaatatattctactttacatttatgataagaaataatgcatcaatacttaa 28333259  T
Q  101 caaagtgctcaaaactgtttttctctctctttc 133  Q
    |||    ||||||||| ||||||||||||||||    
T  28333260 caagtcactcaaaactatttttctctctctttc 28333292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 34064204 - 34064336
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||| ||||||||||| |||||||||| | |||||| ||||||||||||||||||| |||||||||||||||||||    ||||||  |||||||| |    
T  34064204 ttttttacaattataactctaattaatattactttcatcactctcaattcaatatattctactttacatttatgataagaaagaatgcaccaatacttaa 34064303  T
Q  101 caaagtgctcaaaactgtttttctctctctttc 133  Q
    |||    ||||||||| ||||||||||| ||||    
T  34064304 caagacactcaaaactatttttctctctatttc 34064336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 14649037 - 14648935
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||||||||||||||| |||||||||| | |||||| ||||||||||||||||||| ||| || |||||||||||||| | |||||  ||||| ||||    
T  14649037 ttttttccaattataactctaattaatattactttcatcactctcaattcaatatattctaccttgcatttatgataatgagaaatgcaccaataattga 14648938  T
Q  101 caa 103  Q
    |||    
T  14648937 caa 14648935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 4 - 161
Target Start/End: Original strand, 43007886 - 43008043
Alignment:
Q  4 tttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaa 103  Q
    |||||||| |||||| |||||||||| |||||||  ||||||||||||||||||| || |||| ||||||||||| |   |||||   ||||||||||||    
T  43007886 tttccaataataactctaattaatattattttcaccactctcaattcaatatattctaatttaaatttatgataaagaaaaatgcacaaatacttgacaa 43007985  T
Q  104 ag-tgctcaaaactgtttttctctctctttcgcttatacttttttcttcttaatatgtg 161  Q
    ||   ||||||||| |||||| ||||||||| ||||||| ||||| ||||||| |||||    
T  43007986 agacactcaaaactatttttccctctctttcacttatacgttttt-ttcttaacatgtg 43008043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 37496515 - 37496438
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||||||||||||| |||||||||  | |||||| ||||||||||||||||||| |||||||||||||||||||    
T  37496515 ttttttccaattataactttaattaatactactttcatcactctcaattcaatatattctactttacatttatgataa 37496438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 27337991 - 27337887
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||||||||||||||| |||||||||| | ||| |  |||| |||||||||||||||||||||||||||||||||| |   |||||  ||||||||||    
T  27337991 ttttttccaattataactttaattaatattacttttaccactcccaattcaatatattatactttacatttatgataaagaataatgcaccaatacttga 27337892  T
Q  101 caaag 105  Q
    |||||    
T  27337891 caaag 27337887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 32775972 - 32776131
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||||||||||||||| ||| |||||  | |||||  |||| |||||||||||||| ||||||||||||||||||| |  ||||||  |||||||| |    
T  32775972 ttttttccaattataactctaaataatactactttcaccactcccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttaa 32776071  T
Q  101 caaa-gtgctcaaaactgtttttctctctctttcgcttatacttttttcttcttaatatgtg 161  Q
    |||| |  ||||||||  |||||||||||| ||| |||||||  |||  |||||||||||||    
T  32776072 caaaggcactcaaaaccatttttctctctccttcacttatacacttt--ttcttaatatgtg 32776131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 3667995 - 3667918
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||||| ||||| | |||||||||| | |||||| ||||||||||||||||||| |||||||||||||||||||    
T  3667995 ttttttccaaatataattctaattaatattactttcatcactctcaattcaatatattctactttacatttatgataa 3667918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 5068416 - 5068339
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||||||||||||| |||||||||| | |||||  ||||| ||||||||||||| |||||||||||||||||||    
T  5068416 ttttttccaattataactctaattaatattactttcaccactcttaattcaatatattctactttacatttatgataa 5068339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 30462649 - 30462726
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||| ||||||||||| |||||||||  | |||||| |||||||||||||||||||||| ||||||||||||||||    
T  30462649 tttttttcaattataactctaattaatactaatttcatcactctcaattcaatatattatattttacatttatgataa 30462726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 33 - 150
Target Start/End: Complemental strand, 45218244 - 45218126
Alignment:
Q  33 tttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaa-gtgctcaaaactgtttttctctctctt 131  Q
    ||||| ||||| |||||||||||||| ||||||||||||||||||| |  ||||||  |||||||||| ||| |  ||||||||| ||||||||||||||    
T  45218244 tttcacaactcccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgaaaaaggcactcaaaactatttttctctctctt 45218145  T
Q  132 tcgcttatacttttttctt 150  Q
    ||  ||||||  |||||||    
T  45218144 tcctttatacacttttctt 45218126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 6591657 - 6591580
Alignment:
Q  3 ttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatg 80  Q
    |||| |||||||||||||||||||||| |  ||||| ||||| ||||||||||||| |||||| ||||||||||||||    
T  6591657 tttttcaattataactataattaatattacgttcattactcttaattcaatatattctactttgcatttatgataatg 6591580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 37264310 - 37264404
Alignment:
Q  9 aattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaa 103  Q
    |||||||||| |||||||||  | |||||  |||| |||||||||||||| |||||| |||||||||||| | | ||||| ||||||||||||||    
T  37264310 aattataactctaattaatactactttcaccactcccaattcaatatattctactttgcatttatgataaagagcaatgcatcaatacttgacaa 37264404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 38589723 - 38589800
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||||||||||||  |||||||||  | |||||  |||| |||||||||||||| |||||||||||||||||||    
T  38589723 ttttttccaattataacactaattaatactactttcaccactcccaattcaatatattctactttacatttatgataa 38589800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 2842160 - 2842068
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaa 103  Q
    |||||| |||||||||||  | |||||| ||||| |||||||||||||  ||||| ||||||||||| ||  |||||| ||||||||||||||    
T  2842160 ttataattataattaatactactttcatcactctaaattcaatatatttcactttgcatttatgatagtggagaatgcatcaatacttgacaa 2842068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 24288417 - 24288489
Alignment:
Q  6 tccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    ||||||||||||| |||||||||| |  |||| | || ||||||||||||||| |||||||||||||||||||    
T  24288417 tccaattataactctaattaatattacattcacagctttcaattcaatatattctactttacatttatgataa 24288489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 36070101 - 36070244
Alignment:
Q  8 caattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaag-t 106  Q
    |||||||| || |||||||||  | |||||| |||||||||||| |||||| |||||||| |||||||||| |   |||||  ||||| |||||||||      
T  36070101 caattatagctctaattaatactactttcatcactctcaattcagtatattctactttacgtttatgataaagaataatgcaccaatatttgacaaagac 36070200  T
Q  107 gctcaaaactgtttttctctctctttcgcttatacttttttctt 150  Q
     ||||||||  |||| |||||||||||  |||||| ||||||||    
T  36070201 actcaaaaccattttcctctctctttcatttatacatttttctt 36070244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 39343787 - 39343712
Alignment:
Q  3 ttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||| ||||||||||| |||||||||  |||||||  ||||  ||||||||||||| |||||||||||||||||||    
T  39343787 tttttcaattataactctaattaatactattttcaccactccaaattcaatatattctactttacatttatgataa 39343712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 39498663 - 39498742
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatg 80  Q
    ||||||| |||||||| | |||||||||| | |||||| |||| ||||||||||||||||| |||  |||||||||||||    
T  39498663 ttttttctaattataattctaattaatattactttcatcactcccaattcaatatattatattttgaatttatgataatg 39498742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 8149948 - 8150115
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||||||||||||||| |||||||||| | |||||| |||   | ||| ||||||| ||||||   ||||||||||||   |||||   |||| ||||    
T  8149948 ttttttccaattataactctaattaatattactttcatcactactagttcgatatattctactttgattttatgataatggaaaatgcacaaatatttga 8150047  T
Q  101 caaagtgctcaaaactgtttttctctctctttcgcttatacttttttcttcttaatatgtgcaaaatgaa 170  Q
    ||||   || |||||  |||||||||||||||| ||||||| ||||  |||||||||||||  |||||||    
T  8150048 caaaacacttaaaaccatttttctctctctttcacttatacatttt--ttcttaatatgtgtgaaatgaa 8150115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 18731431 - 18731532
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||||||||||||||| |||||||||    |||||  |||  |||||||||||||| ||||||||||||||||||| |  |||| | |||||||||||    
T  18731431 ttttttccaattataactctaattaatac---tttcaccacttccaattcaatatattctactttacatttatgataaagaagaattcatcaatacttga 18731527  T
Q  101 caaag 105  Q
     ||||    
T  18731528 taaag 18731532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 27242847 - 27242769
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatg 80  Q
    |||||| |||||||||| |||||||| | |||||||| | ||||||||||||||||| || ||| |||||||| |||||    
T  27242847 tttttctaattataactctaattaattttattttcatcattctcaattcaatatattttattttgcatttatgttaatg 27242769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 36117650 - 36117724
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatga 75  Q
    ||||||||  |||||||| |||||||||||| |||||| | | |||||||||||||||  |||||||||||||||    
T  36117650 ttttttccctttataactttaattaatatcactttcatcattttcaattcaatatattccactttacatttatga 36117724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 10355853 - 10355776
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||| ||||||||||| |||||||||| | ||| |  | ||||||||||||||||| |||||| ||||||||||||    
T  10355853 tttttttcaattataactctaattaatattacttttaccattctcaattcaatatattctactttgcatttatgataa 10355776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 17266016 - 17266113
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatactt 98  Q
    |||||||||| |||| || |||||||||| |||||||| |||| |||||| |||||||  ||||| ||||||||||| ||  ||||||  ||||||||    
T  17266016 ttttttccaaatatatctctaattaatattattttcatcactcccaattcgatatatttcactttgcatttatgatagtgaagaatgcaccaatactt 17266113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 25778733 - 25778810
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    ||||||| |||||||||| |||||||||  | |||||| |||  |||||||||||||| |||||| ||||||||||||    
T  25778733 ttttttctaattataactctaattaatactactttcatcacttccaattcaatatattttactttgcatttatgataa 25778810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 28923337 - 28923244
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaa 104  Q
    |||||| |||||||||||||| |||||| |||||||||| | ||| ||  ||||| ||||||| ||||||  ||||||  ||||||||||||||    
T  28923337 ttataattataattaatatcactttcatcactctcaatttattatcttccactttgcatttataataatggtgaatgcaccaatacttgacaaa 28923244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 30659598 - 30659465
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||||||||||||||| |||||||||  | |||||  |||   ||||||||||||| ||||||| ||||||||||| |  ||| ||   |||| ||||    
T  30659598 ttttttccaattataactctaattaatactactttcaccacttcaaattcaatatattctactttatatttatgataaagaagaacgcacaaatatttga 30659499  T
Q  101 caaa-gtgctcaaaactgtttttctctctctttc 133  Q
    |||| |  ||||||||| ||||||||||||||||    
T  30659498 caaaggcactcaaaactatttttctctctctttc 30659465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 31581561 - 31581432
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    ||||||||| |||||||| |||||||||  | |||||| | | |||||||||||||||  | ||||||||||||||| ||  ||||||  |||||||| |    
T  31581561 ttttttccatttataactctaattaatactactttcatcattttcaattcaatatattccattttacatttatgatattggagaatgcaccaatacttaa 31581462  T
Q  101 caaa-gtgctcaaaactgtttttctctctc 129  Q
    |||| || || |||||| ||||| ||||||    
T  31581461 caaatgtacttaaaactatttttatctctc 31581432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 1102061 - 1101997
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatacttt 65  Q
    ||||||| |||||||| | |||||||||| |||||||| ||||||||||| ||||||| ||||||    
T  1102061 ttttttctaattataattttaattaatattattttcattactctcaattcgatatattctacttt 1101997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 29257536 - 29257612
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    ||||||||  |||||||| |||||||||| | |||||| |||| ||||||||||||||  ||||| |||||||||||    
T  29257536 ttttttccctttataactctaattaatattactttcatcactcccaattcaatatattccactttgcatttatgata 29257612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 30459052 - 30459128
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    ||||| ||||||||| | ||||||||| ||||||||  | ||||||||||||||||| || ||||||||||| ||||    
T  30459052 ttttttcaattataattctaattaataacattttcagcattctcaattcaatatattctattttacatttattataa 30459128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 30463005 - 30463155
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    ||||||||  |||||||| |||||||||| | |||||| | | |||||||||||||||  | ||||||||||||||  ||  ||||||  |||||||| |    
T  30463005 ttttttccttttataactctaattaatattactttcatcattttcaattcaatatattccattttacatttatgattgtggagaatgcaccaatacttaa 30463104  T
Q  101 caaagtg--ctcaaaactgtttttctctctctttcgcttatacttttttctt 150  Q
    | |||||  || |||||| |||||||||||| |||  |||||| ||||||||    
T  30463105 c-aagtgcacttaaaactatttttctctctcattcatttatacatttttctt 30463155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 34963929 - 34963853
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    ||||||||  |||||||| |||||||||| | |||||| | |||||||| ||||||||  |||||||||||||||||    
T  34963929 ttttttccctttataactctaattaatattactttcatcattctcaattaaatatatttcactttacatttatgata 34963853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 175
Target Start/End: Original strand, 9658835 - 9658999
Alignment:
Q  9 aattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaagtgc 108  Q
    |||||||| | |||||| ||  |||||||| ||||  ||||| |||| || |||||||||||||| |||| |   |||||  ||||| || ||||    |    
T  9658835 aattataattttaattagtactattttcatcactcctaattcgatatgttctactttacatttatcataagggaaaatgcaccaatagttcacaagacac 9658934  T
Q  109 tcaaaactgtttttctctctctttcgcttatacttttttcttcttaatatgtgcaaaatgaataaaa 175  Q
    |||||||  |||||||||||||||||||| ||| ||||  |||||||||||||  ||||||||||||    
T  9658935 tcaaaaccatttttctctctctttcgcttgtacatttt--ttcttaatatgtgtgaaatgaataaaa 9658999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 27234492 - 27234595
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||||||| ||||||| |||||||||  |||||||| |||| ||||| ||||||||    ||| ||||||||||| ||  |||||| ||||||||| |    
T  27234492 ttttttccaaatataactttaattaatactattttcatcactcacaatttaatatatttcgttttgcatttatgatagtggagaatgcatcaatacttaa 27234591  T
Q  101 caaa 104  Q
    ||||    
T  27234592 caaa 27234595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 19687992 - 19688050
Alignment:
Q  45 caattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaa 103  Q
    ||||||||||||||||||||| ||||||||||||||   ||| | ||||||||||||||    
T  19687992 caattcaatatattatactttgcatttatgataatggtaaattcatcaatacttgacaa 19688050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 9602850 - 9602927
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    ||||||| |||||||||  |||||||||  | |||||  |||||||||||||||| || |||||| ||||||||||||    
T  9602850 ttttttctaattataacactaattaatactactttcaccactctcaattcaatatgttctactttgcatttatgataa 9602927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 9830421 - 9830498
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    ||||||| |||||||||  |||||||||  | |||||  |||||||||||||||| || |||||| ||||||||||||    
T  9830421 ttttttctaattataacactaattaatactactttcaccactctcaattcaatatgttctactttgcatttatgataa 9830498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 1099204 - 1099140
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatacttt 65  Q
    |||||| ||||||||||| |||||||||| |||||||| |  |||||||| ||||||| ||||||    
T  1099204 tttttttcaattataactttaattaatattattttcattatcctcaattcgatatattctacttt 1099140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 5724780 - 5724676
Alignment:
Q  46 aattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaagtgctcaaaactgtttttctctctctttcgcttatactttt 145  Q
    |||||||||||||  ||||||||||||||||| ||  ||||||   ||||||| |||| |  || |||||| |||||||||||| |||  |||||| |||    
T  5724780 aattcaatatatttcactttacatttatgatagtggagaatgcactaatacttaacaaggcacttaaaactatttttctctctccttcatttatacattt 5724681  T
Q  146 ttctt 150  Q
    |||||    
T  5724680 ttctt 5724676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 78
Target Start/End: Complemental strand, 21412113 - 21412077
Alignment:
Q  42 tctcaattcaatatattatactttacatttatgataa 78  Q
    ||||||||||||||||| |||||||||||||||||||    
T  21412113 tctcaattcaatatattttactttacatttatgataa 21412077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 33584552 - 33584628
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    ||||||||  ||||||||||||||||||  | |||||| |||| ||||||||||||||  | ||| |||||||||||    
T  33584552 ttttttccctttataactataattaatactactttcatcactcccaattcaatatattccattttgcatttatgata 33584628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 39171157 - 39171229
Alignment:
Q  31 attttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaa 103  Q
    ||||| || ||||| |||| ||||||||||||||| ||||||||||||| | |||||| | |||| |||||||    
T  39171157 atttttatcactcttaatttaatatattatactttgcatttatgataattttgaatgcataaatatttgacaa 39171229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 46288549 - 46288473
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    ||||||||  |||||||| |||||||||  | |||||||||| |||||||||||||||  ||||| |||| ||||||    
T  46288549 ttttttccctttataactctaattaatactactttcataactttcaattcaatatattccactttgcattaatgata 46288473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 32972136 - 32971989
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||| ||||||||||  |||||||||  | |||||  |||| |||||||||||||| |||||| ||||||||| ||    ||||||  ||||| ||||    
T  32972136 tttttttcaattataacactaattaataatactttcaccactcacaattcaatatattctactttgcatttatgacaaaaaagaatgcaccaatagttga 32972037  T
Q  101 caa-agtgctcaaaactgtttttctctctctttcgcttatactttttt 147  Q
     ||  |  ||||||||  |||||||||||||||| ||||||| |||||    
T  32972036 taagggcactcaaaaccatttttctctctctttcacttatacattttt 32971989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 3781289 - 3781220
Alignment:
Q  8 caattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatg 80  Q
    ||||||||||| |||||||||  |||||||| |||| ||||||||||   |||||||| ||||||| ||||||    
T  3781289 caattataactctaattaataatattttcattactcccaattcaata---tatactttgcatttataataatg 3781220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 78
Target Start/End: Original strand, 6838090 - 6838128
Alignment:
Q  40 actctcaattcaatatattatactttacatttatgataa 78  Q
    ||||||||||||||||||| ||||||| |||||||||||    
T  6838090 actctcaattcaatatattttactttatatttatgataa 6838128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 11726789 - 11726847
Alignment:
Q  20 taattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||||| ||||  || |||||||||||||||| || ||||||| |||||||||||    
T  11726789 taattaatattatttgtatcactctcaattcaatatcttctactttatatttatgataa 11726847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 33774151 - 33774021
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaagtgctc 110  Q
    |||||| | |||||||||  | ||||| ||||  ||||||| ||||||  ||||| ||| ||||||| ||  |||| | ||||||||| ||||    |||    
T  33774151 ttataattctaattaatactactttcacaacttacaattcagtatattccactttgcatctatgatagtggagaatacatcaatacttaacaagacactc 33774052  T
Q  111 aaaactgtttttctctctctttcgcttatac 141  Q
    |||||| |||||||||||||||| |||||||    
T  33774051 aaaactatttttctctctctttcacttatac 33774021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 34001964 - 34001898
Alignment:
Q  14 taactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatg 80  Q
    ||||| |||||||||  | |||||| || ||||||||||||||||  ||||| ||||||||||||||    
T  34001964 taactgtaattaatactactttcatcaccctcaattcaatatattccactttgcatttatgataatg 34001898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 37157169 - 37157235
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    |||||||| |||||||||   ||||||| | | |||||| |||||||| ||||||||||||||||||    
T  37157169 ttataactctaattaatacttttttcatcattttcaatttaatatattctactttacatttatgata 37157235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 23703905 - 23704034
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    ||||||||| |||||||| |||||||||  | ||| || | | |||||||||||||||  | ||||||||||||||| ||  ||||||  ||||| || |    
T  23703905 ttttttccatttataactctaattaatactacttttatcattttcaattcaatatatttcattttacatttatgatagtggagaatgcagcaataattaa 23704004  T
Q  101 caa-agtgctcaaaactgtttttctctctc 129  Q
    |||  | ||| |||||| ||||||||||||    
T  23704005 caagtgcgcttaaaactatttttctctctc 23704034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 39143965 - 39143892
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatg 74  Q
    |||||||||||||||| |||||||||||| |||||||  |||  | ||||| |||||| || ||| ||||||||    
T  39143965 ttttttccaattataattataattaatattattttcaccacttccgattcattatattctattttgcatttatg 39143892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 29997146 - 29997070
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    ||||| |||||||||   |||||||||  | ||||| || || ||| ||||||||||||||||| ||||||||||||    
T  29997146 ttttttcaattataatactaattaatactactttcacaattcccaactcaatatattatactttgcatttatgataa 29997070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 45890955 - 45890891
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatacttt 65  Q
    ||||||||  ||||||||||||||||||| | |||||| | |  |||||||||||||| ||||||    
T  45890955 ttttttccctttataactataattaatattactttcatcatttccaattcaatatattttacttt 45890891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 1e-24; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 2195457 - 2195615
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||||||||||||||| |||||||||  | |||||| |||| |||||||||||||| |||||| ||||||||||||    ||||||  |||||||| |    
T  2195457 ttttttccaattataactctaattaatactactttcatcactcccaattcaatatattctactttgcatttatgataagaaagaatgcaccaatacttaa 2195556  T
Q  101 caaagtgctcaaaactgtttttctctctctttcgcttatacttttttcttcttaatatgtg 161  Q
    |||    ||||||||| |||||||||||||||| |||||||  |||  |||||||||||||    
T  2195557 caagacactcaaaactatttttctctctctttcacttatacacttt--ttcttaatatgtg 2195615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 28791297 - 28791429
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||| ||||||||||||| |||||||||  | ||||| ||||| |||||||||||||| || |||||||||||||||| |  ||||||  ||||||||||    
T  28791297 ttttctccaattataactctaattaatactactttcacaactcccaattcaatatattctagtttacatttatgataaagaagaatgcaccaatacttga 28791396  T
Q  101 caaa-gtgctcaaaactgtttttctctctcttt 132  Q
     ||| |  ||||||||| |||||||||||||||    
T  28791397 aaaaggcactcaaaactatttttctctctcttt 28791429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 8418420 - 8418317
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||| ||||||||||| |||||||||  | |||||| |||||||||||| |||||| ||||||||||||||||||| |   ||||| |||||||||||    
T  8418420 tttttttcaattataactctaattaatactactttcatcactctcaattcagtatattctactttacatttatgataaagaataatgcatcaatacttga 8418321  T
Q  101 caaa 104  Q
    ||||    
T  8418320 caaa 8418317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 14117451 - 14117601
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||| ||||||||||| |||||||||| | ||||| |||| |||||||||||||||  |||||||||||||||||| |  |||| |  ||||||||||    
T  14117451 tttttttcaattataactctaattaatattactttcacaactttcaattcaatatattcaactttacatttatgataaagaagaatacaccaatacttga 14117550  T
Q  101 caaa-gtgctcaaaactgtttttctctctctttcgcttatacttttttctt 150  Q
     ||| |  |||||||||  |||||||||||||||  ||||||  |||||||    
T  14117551 aaaaggcactcaaaactaattttctctctctttcctttatacacttttctt 14117601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 42412501 - 42412351
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    ||||||||||||||| || |||||||||  | |||||| |||| ||||||||||||||  ||||| ||||||||||||||  ||||||  |||||  |||    
T  42412501 ttttttccaattatagctctaattaatactactttcatcactcccaattcaatatattccactttgcatttatgataatggagaatgcaccaatatatga 42412402  T
Q  101 caa-agtgctcaaaactgtttttctctctctttcgcttatacttttttctt 150  Q
    ||| ||  || |||||| |||||||||||| ||| ||||||| ||||||||    
T  42412401 caagagcacttaaaactatttttctctctcattcacttatacatttttctt 42412351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 1230474 - 1230401
Alignment:
Q  7 ccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatg 80  Q
    |||||||||||| |||||||||| |||| ||| ||||||||||||||||||| |||||| ||||||||||||||    
T  1230474 ccaattataactttaattaatattatttccatcactctcaattcaatatattctactttgcatttatgataatg 1230401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 40077868 - 40077764
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||| |||||||||||  ||||||||| | ||||| |||||  ||||||||||||| ||||||||||||||||||| |  ||||||  ||||||||||    
T  40077868 tttttttcaattataactcaaattaatattactttcacaactccaaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttga 40077769  T
Q  101 caaag 105  Q
    |||||    
T  40077768 caaag 40077764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 41726510 - 41726614
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||| ||||||||||| |||||||||  | ||||| ||||| |||||||||||||| ||||||||||||||||||| |  ||||||  ||||||||||    
T  41726510 tttttttcaattataactgtaattaatactaatttcacaactcccaattcaatatattctactttacatttatgataaagaagaatgcaacaatacttga 41726609  T
Q  101 caaag 105  Q
     ||||    
T  41726610 aaaag 41726614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 2797029 - 2797167
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    ||||| |||||||||||| |||||||||| | |||||| |||| |||||||||||||| |||||| ||||||||||||    |||||| ||| ||  |||    
T  2797029 tttttaccaattataactctaattaatattactttcattactcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatga 2797128  T
Q  101 caaagtgctcaaaactgtttttctctctctttcgcttat 139  Q
    ||||   ||||||||  ||||||||| |||||| |||||    
T  2797129 caaaacactcaaaaccatttttctctttctttcacttat 2797167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 7258484 - 7258383
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgac 101  Q
    ||||||||||||||||| |||||||||  | |||||| |||| |||||||||||||| || ||| ||||||||||||||   |||||  |||||||||||    
T  7258484 tttttccaattataactctaattaatactactttcatcactcccaattcaatatattctagtttgcatttatgataatgataaatgcaccaatacttgac 7258385  T
Q  102 aa 103  Q
    ||    
T  7258384 aa 7258383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 11637140 - 11637206
Alignment:
Q  12 tataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||||||||||||  | |||||  ||||||||||||||||||| |||||||||||||||||||    
T  11637140 tataactataattaatactactttcaccactctcaattcaatatattctactttacatttatgataa 11637206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 27868443 - 27868341
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||| ||||||||| | |||||||||  | |||||| | ||||||||||||||||| |||||| ||||||||||||||   ||||  |||||||||||    
T  27868443 tttttttcaattataattttaattaatactactttcatcattctcaattcaatatattctactttgcatttatgataatgataaatggatcaatacttga 27868344  T
Q  101 caa 103  Q
    |||    
T  27868343 caa 27868341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 28802756 - 28802906
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    ||||||||  |||||||| |||||||||  |||||||| |||||||||||||||||||  ||||| ||||||||||| ||  ||||   ||||||||| |    
T  28802756 ttttttccctttataactctaattaataatattttcatcactctcaattcaatatattccactttgcatttatgatagtggagaatagatcaatacttaa 28802855  T
Q  101 caa-agtgctcaaaactgtttttctctctctttcgcttatacttttttctt 150  Q
    ||| ||  || |||||  ||||||||||||||||  |||||| ||| ||||    
T  28802856 caagagcacttaaaaccatttttctctctctttcatttatacatttgtctt 28802906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 29638297 - 29638367
Alignment:
Q  8 caattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    ||||||||||| |||||||||| | |||||  ||||  |||||||||||||||||||||||||||||||||    
T  29638297 caattataactctaattaatattactttcaccactcctaattcaatatattatactttacatttatgataa 29638367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 44615473 - 44615411
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttat 73  Q
    |||||||| |||||||||| |||||||| ||||||||||||||||||| |||||| |||||||    
T  44615473 ttataactctaattaatattattttcatcactctcaattcaatatattctactttgcatttat 44615411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 7755177 - 7755048
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    ||||||| |||||||| | |||||||||  | |||||| |||||||| |||| |||||||||||| |||||||| |||||   ||||| ||||||||| |    
T  7755177 ttttttctaattataaatttaattaatactactttcatcactctcaactcaaaatattatactttgcatttatgttaatgacaaatgcgtcaatacttca 7755078  T
Q  101 caa-agtgctcaaaactgtttttctctctc 129  Q
    ||| ||||||  ||||  ||||||||||||    
T  7755077 caagagtgcttgaaaccatttttctctctc 7755048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 4274417 - 4274341
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    |||||| || |||||||| |||||||||| |||||||  |||||||||||||||||||  ||||| |||||||||||    
T  4274417 tttttttcatttataactctaattaatattattttcaccactctcaattcaatatatttcactttgcatttatgata 4274341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 32679025 - 32679101
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    ||||| ||||||||||| |||||||||  | ||| | ||||||||||| |||||||| |||||||||||||||||||    
T  32679025 ttttttcaattataactctaattaatactacttttacaactctcaatttaatatattttactttacatttatgataa 32679101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 43845000 - 43844846
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||||||||||||||| ||||||||   | ||| | ||||| ||||| | |||||| ||||||||||||||||||| |  || |    ||||||||||    
T  43845000 ttttttccaattataactctaattaattctactttaacaactc-caattaattatattttactttacatttatgataaagaagagtataccaatacttga 43844902  T
Q  101 caaagtgctcaaaactgtttttctctctctttcgcttatacttttttcttcttaata 157  Q
    |||||  ||||||||  |||||||||||||||  ||||||| ||||| |||||||||    
T  43844901 caaaggtctcaaaaccatttttctctctcttttacttatacattttt-ttcttaata 43844846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 29451338 - 29451465
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    ||||||| |||||||| | |||||| ||  | |||||| || |||||||||||||||||||||||  |||||||||||    |||| |   |||||||||    
T  29451338 ttttttctaattataaatctaattagtactactttcatcaccctcaattcaatatattatactttggatttatgataagaaagaatacactaatacttga 29451437  T
Q  101 caaagtgctcaaaactgtttttctctct 128  Q
    |||| || |||||||| |||||||||||    
T  29451438 caaaatgttcaaaactatttttctctct 29451465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 15559239 - 15559169
Alignment:
Q  10 attataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatg 80  Q
    ||||||||| ||||||||| || |||||| ||||  ||||||||||||| |||||| ||||||||||||||    
T  15559239 attataactctaattaataccactttcatcactcctaattcaatatattctactttgcatttatgataatg 15559169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 18725910 - 18726000
Alignment:
Q  13 ataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaa 103  Q
    |||||| |||||||||| | |||||| ||||| |||| |||||||| |||||||||||||| ||||||   ||||| |||||||| |||||    
T  18725910 ataactttaattaatattactttcattactcttaattaaatatattctactttacatttataataatgaaaaatgcatcaatactggacaa 18726000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 2875204 - 2875127
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    ||||| |||||||||||| |||||||||  | ||||||  |||| ||||||||||||| |||||| ||||||||||||    
T  2875204 tttttaccaattataactctaattaatactactttcattcctctaaattcaatatattctactttgcatttatgataa 2875127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 5878312 - 5878267
Alignment:
Q  33 tttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||    
T  5878312 tttcacaactctcaattcaatatattctactttacatttatgataa 5878267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 8618117 - 8618194
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||| ||||||||||||| |||||||||  ||||| |  |||  ||||||||||||||||| ||||||||||||||||    
T  8618117 ttttatccaattataactttaattaatactatttttaccacttccaattcaatatattatattttacatttatgataa 8618194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 14689949 - 14690026
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||||||||||||  |||||||||  | |||||  |||| |||||||||||||| |||||| ||||||||||||    
T  14689949 ttttttccaattataacactaattaatactactttcaccactcccaattcaatatattctactttgcatttatgataa 14690026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 14748824 - 14748747
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||||||||||||  |||||||||  | |||||  | ||||||||||||||||| |||||| ||||||||||||    
T  14748824 ttttttccaattataacactaattaatactactttcaccattctcaattcaatatattctactttgcatttatgataa 14748747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 23764987 - 23765032
Alignment:
Q  33 tttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||    
T  23764987 tttcatcactctcaattcaatatattttactttacatttatgataa 23765032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 33826220 - 33826297
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||| ||||||||||| |||| ||||  | |||||| | ||||||||||||||||| | |||||||||||||||||    
T  33826220 tttttttcaattataactctaatcaatactactttcatcattctcaattcaatatattctgctttacatttatgataa 33826297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 5392038 - 5392141
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    ||||||||  |||||||| |||||||||  | |||||  |||| ||||||||||||||  ||||| ||||||||||| ||  ||||||  ||||||||||    
T  5392038 ttttttccctttataactctaattaatactactttcaacactcccaattcaatatattccactttgcatttatgatagtggagaatgcaccaatacttga 5392137  T
Q  101 caaa 104  Q
    ||||    
T  5392138 caaa 5392141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 27987655 - 27987726
Alignment:
Q  9 aattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatg 80  Q
    ||||||||||||||||||||  | |||||| |||| ||||||||||||||  | ||| ||||||||||||||    
T  27987655 aattataactataattaatactactttcatcactcacaattcaatatatttcattttgcatttatgataatg 27987726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 28044957 - 28045028
Alignment:
Q  9 aattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatg 80  Q
    ||||||||||||||||||||  | |||||| |||| ||||||||||||||  | ||| ||||||||||||||    
T  28044957 aattataactataattaatactactttcatcactcacaattcaatatatttcattttgcatttatgataatg 28045028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 39171542 - 39171661
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgac-aaagtgct 109  Q
    |||||||| |||||||||  |||||||| |||| ||||||||||||||  ||||| ||||||||||| |    ||||| ||||||||| || ||||| ||    
T  39171542 ttataactctaattaatactattttcatcactcacaattcaatatattccactttgcatttatgatagtagataatgcatcaatacttaacaaaagtact 39171641  T
Q  110 caaaactgtttttctctctc 129  Q
     |||||  ||||||||||||    
T  39171642 taaaaccatttttctctctc 39171661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 39998191 - 39998302
Alignment:
Q  40 actctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaag-tgctcaaaactgtttttctctctctttcgctta 138  Q
    ||||||||||||||||||| ||||||||||||||||||| |  ||||||   ||||||||| ||||   || ||||   ||||||||||||||||  |||    
T  39998191 actctcaattcaatatattctactttacatttatgataaagaagaatgctcaaatacttgataaagacacttaaaatcatttttctctctctttcattta 39998290  T
Q  139 tacttttttctt 150  Q
    |||| |||||||    
T  39998291 tactcttttctt 39998302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 45197608 - 45197703
Alignment:
Q  9 aattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaa 104  Q
    ||||||| || |||||||||  | |||||| |||||||||||||||||||  | ||||||||||||| | ||  |||||| ||||||||| |||||    
T  45197608 aattatagctctaattaatagtaatttcatcactctcaattcaatatatttcattttacatttatgacagtgaagaatgcatcaatacttaacaaa 45197703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 32241542 - 32241440
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    ||||||||  |||||||| |||||||||| | ||||| ||||  ||||||| ||||||  ||||| ||||||||||| ||  |||||| ||||||||| |    
T  32241542 ttttttccctttataactctaattaatattactttcacaacttccaattcattatattccactttgcatttatgatagtgaagaatgcatcaatacttaa 32241443  T
Q  101 caa 103  Q
    |||    
T  32241442 caa 32241440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 105
Target Start/End: Complemental strand, 325195 - 325130
Alignment:
Q  40 actctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaag 105  Q
    |||||||||||||||||||  |||||| ||||||||||| |  ||||||  |||||||||||||||    
T  325195 actctcaattcaatatattccactttatatttatgataacggtgaatgcaccaatacttgacaaag 325130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 886566 - 886489
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||| ||||||||||  |||||||||| | ||| || | ||||||||| ||||||| |||||| ||||||||||||    
T  886566 tttttttcaattataacactaattaatattacttttatcattctcaattcgatatattctactttgcatttatgataa 886489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 5962581 - 5962488
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaa 104  Q
    |||||||| |||||||||| | |||||| |||| ||||||||||||||  ||||| ||||||| ||| ||  ||||||  |||||||| |||||    
T  5962581 ttataactctaattaatattaatttcatcactcccaattcaatatattccactttgcatttataatagtggagaatgcaccaatacttaacaaa 5962488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 38201509 - 38201432
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||| || |||||||| |||||||||| | |||||| |||| |||||||||||| | || ||| ||||||||||||    
T  38201509 tttttttcatttataactctaattaatattactttcattactcccaattcaatatactctaatttgcatttatgataa 38201432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 40316695 - 40316638
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatatt 58  Q
    |||||| ||||||||||| |||||||||| ||| |||| |||| ||||||||||||||    
T  40316695 tttttttcaattataactctaattaatattattctcatcactcccaattcaatatatt 40316638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 10729039 - 10728963
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    ||||||||||| ||||| |||||||||  | ||| || |||| ||||||||||||||  ||||| ||||||||||||    
T  10729039 tttttccaattgtaactctaattaatactactttaatcactcccaattcaatatattccactttgcatttatgataa 10728963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 25174702 - 25174626
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    ||||||||| ||||||  |||||||||| | ||||   ||||||||||||||||||| |||||| ||||||| ||||    
T  25174702 tttttccaactataacactaattaatattactttccctactctcaattcaatatattctactttgcatttataataa 25174626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 12653677 - 12653748
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttat 73  Q
    |||||||  |||||||| | |||||||| | |||||| | |||||||||||||||||  |||||||||||||    
T  12653677 tttttccctttataactctgattaatattactttcatcattctcaattcaatatattccactttacatttat 12653748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 17005945 - 17006011
Alignment:
Q  9 aattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||||| |||||||||    |||||| |||| |||||||||||||| |||||| ||||||||||||    
T  17005945 aattataactctaattaatac---tttcatcactcccaattcaatatattctactttgcatttatgataa 17006011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 17571303 - 17571237
Alignment:
Q  9 aattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||||| |||||||||    |||||| |||| |||||||||||||| |||||| ||||||||||||    
T  17571303 aattataactctaattaatac---tttcatcactcccaattcaatatattctactttgcatttatgataa 17571237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 27973797 - 27973702
Alignment:
Q  8 caattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaa 103  Q
    ||||||||||  |||||||||  |||||| | | || ||||||||| |||| |||||| ||||||||||||||   ||||  ||||||||||||||    
T  27973797 caattataaccctaattaatactattttcgttattcccaattcaatgtattctactttgcatttatgataatggtaaatggatcaatacttgacaa 27973702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 28031066 - 28030971
Alignment:
Q  8 caattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaa 103  Q
    ||||||||||  |||||||||  |||||| | | || ||||||||| |||| |||||| ||||||||||||||   ||||  ||||||||||||||    
T  28031066 caattataaccctaattaatactattttcgttattcccaattcaatgtattctactttgcatttatgataatggtaaatggatcaatacttgacaa 28030971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 29567202 - 29567273
Alignment:
Q  9 aattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatg 80  Q
    |||||||| | |||||||||  | |||||||||||| ||| ||||||||| ||||||  |||||||||||||    
T  29567202 aattataaatttaattaatactactttcataactcttaatgcaatatattttactttgtatttatgataatg 29567273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 150
Target Start/End: Complemental strand, 44790539 - 44790390
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgac 101  Q
    |||||||  |||||||| |||||||||  | |||||  | || ||||||||||||||  ||||||||||||||||| ||  ||||||  |||||||| ||    
T  44790539 tttttccctttataactctaattaatactactttcaccattcccaattcaatatattccactttacatttatgatagtggagaatgcaccaatacttaac 44790440  T
Q  102 aaagtg--ctcaaaactgtttttctctctctttcgcttatacttttttctt 150  Q
     |||||  || |||||| |||||||||||| |||  |||||| ||| ||||    
T  44790439 -aagtgcacttaaaactatttttctctctccttcatttatacatttgtctt 44790390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 45537483 - 45537412
Alignment:
Q  8 caattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataat 79  Q
    ||||||||| | |||||||||  |||||||| ||| ||||||||||||||  |||||| ||| |||||||||    
T  45537483 caattataattctaattaatactattttcatcactatcaattcaatatatgttactttgcatatatgataat 45537412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 26677058 - 26677141
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaat----atattatactttacatttatgataatg 80  Q
    |||||| | ||||||||| |||||||||| | |||||| ||||| ||||||||    ||||| |||||| ||||||||||||||    
T  26677058 ttttttactattataactttaattaatattaatttcatcactcttaattcaatttatatattctactttgcatttatgataatg 26677141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 27875252 - 27875182
Alignment:
Q  9 aattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataat 79  Q
    |||||||||| |||||||||  ||||||   | || ||||||||| ||||||||||| |||||||||||||    
T  27875252 aattataactttaattaatactattttcgacattcccaattcaatgtattatactttgcatttatgataat 27875182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 29615787 - 29615861
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatga 75  Q
    ||||||||  |||||||| |||||||||  | |||||| | || ||||||||||||||  |||||||||||||||    
T  29615787 ttttttccctttataactttaattaatactactttcatcattcccaattcaatatattccactttacatttatga 29615861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 129
Target Start/End: Complemental strand, 31410715 - 31410597
Alignment:
Q  12 tataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgac-aaagtgctc 110  Q
    ||||||| |||||||||  | |||||| ||||| |||||||||||||  ||||| ||||||||||| |||  |||||  ||||| || || |||   ||     
T  31410715 tataactttaattaatactactttcattactcttaattcaatatattccactttgcatttatgatagtgtataatgcaccaatatttaacaaaaacactt 31410616  T
Q  111 aaaactgtttttctctctc 129  Q
    |||||||||||||||||||    
T  31410615 aaaactgtttttctctctc 31410597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 32231838 - 32231768
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacattt 71  Q
    |||||||||||||||||  |||||||||  | |||||  |||| |||||||||||||| |||||| |||||    
T  32231838 ttttttccaattataacactaattaataatactttcaccactcccaattcaatatattttactttgcattt 32231768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 32967385 - 32967319
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    |||||||| |||||||||  | |||||| | |||||||||||||||||  |||||| ||||||||||    
T  32967385 ttataactctaattaatactactttcatcattctcaattcaatatattccactttaaatttatgata 32967319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 36649833 - 36649755
Alignment:
Q  3 ttttccaattataactataattaatatcattttcataact-ctcaattcaatatattatactttacatttatgataatg 80  Q
    |||| ||||||||||| ||||| ||||||||||||| ||| ||||||| |||||||| |  |||  |||||||||||||    
T  36649833 tttttcaattataactctaattgatatcattttcatcactcctcaatttaatatattctgttttgtatttatgataatg 36649755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 41759748 - 41759646
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||| | ||||||||  |||||||||| | |||||  |||| |||||||||||||| ||||||  ||||||||||| |  ||||||  ||||| ||||    
T  41759748 tttttttctattataacattaattaatattactttcactactcccaattcaatatattttactttgtatttatgataaagaagaatgcaccaataattga 41759649  T
Q  101 caa 103  Q
    |||    
T  41759648 caa 41759646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 44975867 - 44975778
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaat--atattatactttacatttatgataatgtggaatgc 88  Q
    |||||| ||||||||||| |||||||||  | |||||| || |||||||||||  ||||| ||| ||||||||| ||||| | |||||||    
T  44975867 ttttttgcaattataactctaattaatactactttcatcacgctcaattcaatacatattctacattacatttacgataaagaggaatgc 44975778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 2119715 - 2119784
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatg 80  Q
    |||||||| |||||||| | ||||||| ||||   |||||| ||||||  ||||||||||||||||||||    
T  2119715 ttataactctaattaatcttattttcacaacttctaattcagtatattccactttacatttatgataatg 2119784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 3442472 - 3442569
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatactt 98  Q
    |||||| ||||||||||| |||||||||  |||||||| | | |||||||||||| ||  | ||||  ||||||||||||  |||| | |||||||||    
T  3442472 tttttttcaattataactctaattaatactattttcatcattttcaattcaatatctttcaatttatgtttatgataatgatgaatacatcaatactt 3442569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 15020661 - 15020738
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    ||||| || |||| ||||||||||||||  | |||||| |||  |||||||||||||| |||||| ||| ||||||||    
T  15020661 tttttaccgattacaactataattaataataatttcatcactaccaattcaatatattctactttgcatgtatgataa 15020738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 3384521 - 3384599
Alignment:
Q  2 tttttccaattataactataattaatatcatt---ttcataactctcaattcaatatattatactttacatttatgata 77  Q
    ||||| ||||||||||| |||||||||  |||   ||||| ||| |||||||||||||||  ||||| |||||||||||    
T  3384521 ttttttcaattataactttaattaataatattactttcatcactttcaattcaatatattcaactttgcatttatgata 3384599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 22490380 - 22490456
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    ||||||||| |||||||| |||||||||  | | |||| | |||||||||||||||||  |||||  ||||||||||    
T  22490380 ttttttccatttataactctaattaatacaactatcatcattctcaattcaatatattccactttgtatttatgata 22490456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 33925202 - 33925130
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttat 73  Q
    ||||||||  |||||||| |||||||||  | ||||| |||| |||||||||||||||  ||||| |||||||    
T  33925202 ttttttccttttataactctaattaatactactttcacaactttcaattcaatatattccactttgcatttat 33925130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0685 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0685
Description:

Target: scaffold0685; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 6518 - 6418
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||| ||||||||||| |||||||||| | |||||  ||||||||||||||||||| ||||||||||||||||||| |  |||||| |||||||||||    
T  6518 tttttttcaattataactctaattaatattactttcaccactctcaattcaatatattttactttacatttatgataaagaagaatgcatcaatacttga 6419  T
Q  101 c 101  Q
    |    
T  6418 c 6418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 5e-24; HSPs: 83)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 52382505 - 52382405
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||| ||||||||||| |||||||||| | |||||  ||||||||||||||||||| ||||||||||||||||||| |  |||||| |||||||||||    
T  52382505 tttttttcaattataactctaattaatattactttcaccactctcaattcaatatattttactttacatttatgataaagaagaatgcatcaatacttga 52382406  T
Q  101 c 101  Q
    |    
T  52382405 c 52382405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 3718968 - 3718837
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||||||| ||||||| |||||||||  |  ||||| |||||||||||||||||||||||||||||||||||||||||   |||||   |||||||||    
T  3718968 ttttttccaactataactctaattaatactaccttcatcactctcaattcaatatattatactttacatttatgataatgataaatgcacaaatacttga 3718869  T
Q  101 caa-agtgctcaaaactgtttttctctctctt 131  Q
    ||| ||  || |||||| ||||||||||||||    
T  3718868 caagagcacttaaaactatttttctctctctt 3718837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 19349113 - 19348982
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||||||||||||||  |||||||||  | ||||| |||||||||||||||||||| || ||| ||||||||||||| ||||||||  ||||||||||    
T  19349113 ttttttccaattataaccctaattaatactactttcaaaactctcaattcaatatattctattttgcatttatgataat-tggaatgcaccaatacttga 19349015  T
Q  101 caaagtgctcaaaactgtttttctctctctttc 133  Q
    |||   |||||||||  ||||||| ||| ||||    
T  19349014 caagacgctcaaaacaatttttctatctttttc 19348982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 27210086 - 27209936
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||||||||||||||| |||||||||   ||||||  ||||||||||||||||||| | ||||||||||||||||| |  ||||||  |||||||||     
T  27210086 ttttttccaattataactctaattaatactcttttcaccactctcaattcaatatattctcctttacatttatgataaagaagaatgcaccaatacttgt 27209987  T
Q  101 caaag-tgctcaaaactgtttttctctctctttcgcttatacttttttctt 150  Q
    |||||   |||||||   ||||||||||||||||  ||||||  |||||||    
T  27209986 caaagacactcaaaatcatttttctctctctttcatttatacacttttctt 27209936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 45305850 - 45305944
Alignment:
Q  9 aattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaa 103  Q
    |||||||||| ||||||| || |||||||| | ||||||||||||||||| |||||| ||||||||||||||  |||||| | ||||||||||||    
T  45305850 aattataactttaattaaaattattttcatcaatctcaattcaatatattctactttgcatttatgataatgaagaatgcataaatacttgacaa 45305944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 12267750 - 12267618
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||||||||||||||| || ||||||  | ||||| ||||| |||||||||||||| ||||||||||||||||||| |  |||||   ||||||||||    
T  12267750 ttttttccaattataactctagttaatactactttcacaactcccaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttga 12267651  T
Q  101 caaa-gtgctcaaaactgtttttctctctcttt 132  Q
     ||| |  ||||||||| ||||||| |||||||    
T  12267650 aaaatgcactcaaaactatttttctttctcttt 12267618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 29225742 - 29225844
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||||||||||||||| |||||||||  | |||||| |||| |||||||||||||| |||||| ||||||||||||    ||||||  ||||||||||    
T  29225742 ttttttccaattataactctaattaatactactttcatcactcccaattcaatatattctactttgcatttatgataagaatgaatgcaccaatacttga 29225841  T
Q  101 caa 103  Q
    |||    
T  29225842 caa 29225844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 705468 - 705391
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||||| ||||||| |||||||||| | ||| |  |||||||||||||||||||||||||||||| ||||||||    
T  705468 ttttttccaaatataactctaattaatattacttttaccactctcaattcaatatattatactttacatctatgataa 705391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 31798407 - 31798484
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||||||||||||  |||||||||| | |||||  ||||||||||||||||||| |||||| ||||||||||||    
T  31798407 ttttttccaattataacactaattaatattactttcactactctcaattcaatatattctactttgcatttatgataa 31798484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 50267557 - 50267407
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    ||||||||  |||||| | |||||||||| | |||||| | || ||||||||||||||  ||||||||||||||||||||  ||||||  |||||||| |    
T  50267557 ttttttccttttataattctaattaatattactttcatcattcccaattcaatatatttcactttacatttatgataatggagaatgcaccaatacttaa 50267458  T
Q  101 caaagtg--ctcaaaactgtttttctctctctttcgcttatacttttttctt 150  Q
    | |||||  || |||||| |||||||||| |||||  |||||| ||||||||    
T  50267457 c-aagtgcacttaaaactatttttctctcactttcatttatacatttttctt 50267407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 30903346 - 30903267
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatg 80  Q
    |||||||||||||||||| |||||||||| |||||||| ||||    ||||||||||| |||||| ||||||||||||||    
T  30903346 ttttttccaattataactctaattaatattattttcatcactcctgtttcaatatattctactttgcatttatgataatg 30903267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 36232908 - 36232758
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||||||||||||||| |||||||||  | |||||  | |  |||||||||||||| ||||||| ||||||||||| |  ||||||  |||||||||     
T  36232908 ttttttccaattataactctaattaatactactttcaccatttccaattcaatatattctactttatatttatgataaagaagaatgcaccaatacttgt 36232809  T
Q  101 caaag-tgctcaaaactgtttttctctctctttcgcttatacttttttctt 150  Q
    |||||   |||||||   ||||||||||||||||| ||||||  |||||||    
T  36232808 caaagacactcaaaatcatttttctctctctttcgtttatacacttttctt 36232758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 2886160 - 2886237
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||||||||||||  |||||||||  | |||||  ||||||||||||||||||| |||||| ||||||||||||    
T  2886160 ttttttccaattataacactaattaatactactttcaccactctcaattcaatatattctactttgcatttatgataa 2886237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 105
Target Start/End: Original strand, 14352562 - 14352659
Alignment:
Q  8 caattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaag 105  Q
    ||||||||||| |||||||||| | |||||  |||| |||||||||||||| ||||||| ||||| ||||| |  ||||||  |||||||||||||||    
T  14352562 caattataactgtaattaatattactttcaccactcccaattcaatatattctactttatatttacgataaagaagaatgcaccaatacttgacaaag 14352659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 24131519 - 24131442
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||||||||||||  |||||||||  | |||||  |||| ||||||||||||||||||||| ||||||||||||    
T  24131519 ttttttccaattataacactaattaatactactttcaccactcccaattcaatatattatactttgcatttatgataa 24131442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 32587764 - 32587857
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaa 104  Q
    |||||||| |||||||||  | |||||| |||||||||||||||||||  ||||| ||||||||||||||   ||||| ||||||||| |||||    
T  32587764 ttataactctaattaataataatttcatcactctcaattcaatatatttcactttgcatttatgataatggaaaatgcatcaatacttaacaaa 32587857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 34877200 - 34877131
Alignment:
Q  10 attataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataat 79  Q
    ||||||||| |||||||||| |||||||| |||| ||||||||||||||  ||||| |||||||||||||    
T  34877200 attataactctaattaatattattttcatcactcacaattcaatatattcaactttgcatttatgataat 34877131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 37925365 - 37925288
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||| ||||||||||  |||||||||| | |||||  ||||||||||||||||||| |||||| ||||||||||||    
T  37925365 tttttttcaattataacactaattaatattactttcaccactctcaattcaatatattctactttgcatttatgataa 37925288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 5115944 - 5115840
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    ||||||| ||||||| || |||||||||| | |||||   |||||||||||||||||| ||  ||||||||||||||| |  |||||| ||||||||||     
T  5115944 ttttttcaaattatagctctaattaatattactttcacctctctcaattcaatatattctatattacatttatgataaagaagaatgcatcaatacttgt 5115845  T
Q  101 caaag 105  Q
    |||||    
T  5115844 caaag 5115840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 20988601 - 20988533
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacat 69  Q
    |||||| ||||||||||| |||||||||| |||||||  |||| |||||||||||||| ||||||||||    
T  20988601 tttttttcaattataactctaattaatattattttcaccactcccaattcaatatattctactttacat 20988533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 10587700 - 10587621
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatg 80  Q
    ||||||| |||||||||  |||||||||  | |||||| ||||||||||||||||||| || ||| ||||||||||||||    
T  10587700 ttttttctaattataacactaattaatactactttcatcactctcaattcaatatattctattttgcatttatgataatg 10587621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 16451620 - 16451687
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttaca 68  Q
    |||||||||||||||||| |||||||||  | ||||| ||||||||||||||||||||  ||||||||    
T  16451620 ttttttccaattataactttaattaatactactttcacaactctcaattcaatatatttaactttaca 16451687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 16460773 - 16460840
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttaca 68  Q
    |||||||||||||||||| |||||||||  | ||||| ||||||||||||||||||||  ||||||||    
T  16460773 ttttttccaattataactttaattaatactactttcacaactctcaattcaatatatttaactttaca 16460840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 14 - 105
Target Start/End: Complemental strand, 21304912 - 21304821
Alignment:
Q  14 taactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaag 105  Q
    ||||| |||||| ||  |||||||  ||||| ||||||||||||||||||||| ||||||||||| |   ||||| ||||||||||||||||    
T  21304912 taactttaattattaatattttcaccactcttaattcaatatattatactttatatttatgataaagaaaaatgcatcaatacttgacaaag 21304821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 40061806 - 40061877
Alignment:
Q  9 aattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatg 80  Q
    |||||||| | |||||||||| | |||||| ||||||||||||||||||| || ||| ||||||||||||||    
T  40061806 aattataattctaattaatattactttcatcactctcaattcaatatattctaatttgcatttatgataatg 40061877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 46363526 - 46363423
Alignment:
Q  5 ttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaa 104  Q
    ||||||||||||| ||||||||||  | || ||  ||||||||||||||||||| |||||| |||||||||||| |  ||||||  ||||| |||| |||    
T  46363526 ttccaattataacaataattaatactacttccaccactctcaattcaatatattttactttgcatttatgataaagaagaatgcaccaatagttgataaa 46363427  T
Q  105 gtgc 108  Q
    ||||    
T  46363426 gtgc 46363423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 51749302 - 51749223
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatg 80  Q
    ||||||||  |||||||| |||||||||| | |||||| |||| ||||||||||||||  ||||| ||||||||||||||    
T  51749302 ttttttccctttataactctaattaatattactttcatcactcccaattcaatatattccactttgcatttatgataatg 51749223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 4466273 - 4466123
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||||||||||||||| |||||||||  | |||||  |||  |||| ||||||||| ||||||||||||||||||| |  |||||   |||||||| |    
T  4466273 ttttttccaattataactctaattaatactactttcaccacttccaatacaatatattctactttacatttatgataaagaagaatggaccaatacttaa 4466174  T
Q  101 caaa-gtgctcaaaactgtttttctctctctttcgcttatacttttttctt 150  Q
    |||| || |||||| |  |||||||||||| ||| || |||  ||||||||    
T  4466173 caaaggtactcaaacccatttttctctctcattcactaatatatttttctt 4466123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 11425988 - 11425838
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||| ||||||||||| |||||||||  | |||||  |||  |||| ||||||||| ||||||||||||||||||| |  |||||   |||||||| |    
T  11425988 tttttttcaattataactttaattaatactactttcactacttccaatacaatatattctactttacatttatgataaagaagaatggaccaatacttaa 11425889  T
Q  101 caaag-tgctcaaaactgtttttctctctctttcgcttatacttttttctt 150  Q
    |||||   ||||||||| |||||||||||| ||| || |||  ||||||||    
T  11425888 caaagacactcaaaactatttttctctctccttcactaatatatttttctt 11425838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 25842596 - 25842666
Alignment:
Q  9 aattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataat 79  Q
    |||||||||||||||||| |  | |||||| | ||||||| ||||||||| ||||||||||||||||||||    
T  25842596 aattataactataattaacactactttcatcattctcaatgcaatatattctactttacatttatgataat 25842666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 27831835 - 27831937
Alignment:
Q  2 tttttccaattata-actataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||||||||||| ||| |||||||||  | |||||| |||| ||||||||||| ||  ||||| ||||||||||||||  ||||||  ||||||||||    
T  27831835 tttttccaattatacactctaattaatactactttcatcactcccaattcaatatcttccactttgcatttatgataatggtgaatgcaccaatacttga 27831934  T
Q  101 caa 103  Q
    |||    
T  27831935 caa 27831937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 7785393 - 7785296
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatactt 98  Q
    ||||||||  |||||||| |||||||||  | ||| ||  ||||||||||||||||||  ||||||||||||||||| ||  |||||| |||||||||    
T  7785393 ttttttccctttataactctaattaatactacttttatcgctctcaattcaatatatttcactttacatttatgatagtggagaatgcatcaatactt 7785296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 26583721 - 26583794
Alignment:
Q  5 ttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||||||||  |||||||||  |||||||| |||| |||||||||||||| || ||| ||||||||||||    
T  26583721 ttccaattataacactaattaataatattttcatcactcccaattcaatatattctattttgcatttatgataa 26583794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 29756261 - 29756184
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||||||||||||  |||||||||  | |||||  |||| |||||||||||||| |||||| ||||||||||||    
T  29756261 ttttttccaattataacactaattaatactactttcaccactcccaattcaatatattctactttgcatttatgataa 29756184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 150
Target Start/End: Original strand, 40019749 - 40019898
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgac 101  Q
    ||||| ||||||||||| |||||||||| | |||||| ||||| |||||||||| ||  |||||   ||||||||||||  |||| |   ||||||||||    
T  40019749 ttttttcaattataactctaattaatattactttcatcactctgaattcaatatttttcactttgtctttatgataatggtgaatacacaaatacttgac 40019848  T
Q  102 aa-agtgctcaaaactgtttttctctctctttcgcttatacttttttctt 150  Q
    || ||  || |||||  |||||||||||| ||| ||||||| ||||||||    
T  40019849 aagagcacttaaaacaatttttctctctcattcacttatacatttttctt 40019898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 50333932 - 50334001
Alignment:
Q  9 aattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||||| |||||||||  | |||||  ||||||||||||||||| | |||||||||||||||||||    
T  50333932 aattataactctaattaataatactttcaccactctcaattcaatatactctactttacatttatgataa 50334001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 51049529 - 51049574
Alignment:
Q  33 tttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||    
T  51049529 tttcacaactcccaattcaatatattatactttacatttatgataa 51049574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 2571353 - 2571429
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    ||||||||| ||||||| || ||||||  | |||||| ||||||||||||||||||| |||||| |||||| |||||    
T  2571353 tttttccaaatataactctagttaatactactttcatcactctcaattcaatatattctactttgcatttaggataa 2571429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 5442329 - 5442405
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    ||||||||  ||||||||||||||||||| | ||||| ||||  ||||||||||||||  ||||| |||||||||||    
T  5442329 ttttttccttttataactataattaatattactttcacaacttccaattcaatatattccactttgcatttatgata 5442405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 26755975 - 26756067
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaa 103  Q
    |||||||| |||||||||  | |||||| | | |||||||||||||||| |||||| |||||||||| ||  |||||| ||||||||| ||||    
T  26755975 ttataactctaattaatactactttcatcattttcaattcaatatattacactttatatttatgatagtggagaatgcatcaatacttaacaa 26756067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 28277147 - 28277055
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaa 103  Q
    |||||||| ||||||||| || |||||| | | |||||||||||||||  ||||||||||||||||| ||  ||||||  |||||||| ||||    
T  28277147 ttataactctaattaataccactttcatcattttcaattcaatatatttcactttacatttatgatactggagaatgcaccaatacttaacaa 28277055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 33149263 - 33149339
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    ||||| |||| |||||  |||||||||  | |||||| ||||||||||||||||||| |||||| ||||||||||||    
T  33149263 ttttttcaataataacactaattaatactactttcatcactctcaattcaatatattctactttgcatttatgataa 33149339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 36784303 - 36784379
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    |||||| || ||||||||||||||||||| ||||||| ||||   |||||||||||||  ||||| |||||||||||    
T  36784303 tttttttcatttataactataattaatattattttcacaacttcaaattcaatatatttcactttgcatttatgata 36784379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 25869669 - 25869750
Alignment:
Q  1 ttttttccaattataactataattaatatcattt---tcataactctcaattcaatatattatactttacatttatgataat 79  Q
    |||||| ||||||||||||||||||| |  ||||   |||| | ||||||| ||||||||| ||||||||||||||||||||    
T  25869669 tttttttcaattataactataattaacactatttacttcatcattctcaatgcaatatattctactttacatttatgataat 25869750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 28839329 - 28839404
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    |||||||  ||||||||||||||||||  | |||||| |||| ||||||||||||||  ||||| |||||||||||    
T  28839329 tttttccctttataactataattaatactactttcatcactcccaattcaatatattccactttgcatttatgata 28839404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 40988264 - 40988343
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatg 80  Q
    |||||| ||||||||||| |||||||||| | |||||| |||||| ||| |||||||| ||||||  |||||| ||||||    
T  40988264 tttttttcaattataactttaattaatattactttcatgactctcgatttaatatattctactttgaatttattataatg 40988343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 46273157 - 46273252
Alignment:
Q  9 aattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaa 104  Q
    |||||||| | |||||||||| |||||||  | ||| |||| |||| ||| ||||||||||||| ||||| |  |||||| |||||||||||||||    
T  46273157 aattataattttaattaatattattttcaccattctgaatttaatacattctactttacatttaagataaagaagaatgcatcaatacttgacaaa 46273252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 48242699 - 48242612
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatactt 98  Q
    |||||||| |||||||||| | ||| || | |||||||||||||||||  ||||||||||||||||| ||  | |||| |||||||||    
T  48242699 ttataactttaattaatattacttttatcattctcaattcaatatattccactttacatttatgatagtggaggatgcatcaatactt 48242612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 2246396 - 2246318
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataat 79  Q
    |||||| ||||||||| | || ||||||  | |||||| ||||||||||||| || || ||||||||||||||||||||    
T  2246396 ttttttgcaattataattctagttaatactactttcatcactctcaattcaacatcttctactttacatttatgataat 2246318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 61 - 186
Target Start/End: Original strand, 7224450 - 7224573
Alignment:
Q  61 actttacatttatgataatgtggaatgcctcaatacttgacaaagtgctcaaaactgtttttctctctctttcgcttatacttttttcttcttaatatgt 160  Q
    |||||| ||||||||||| | ||||||| |||||||||| |||    ||||||||  |||||| || |||||| ||||||| ||||  || |||||||||    
T  7224450 actttatatttatgataaggaggaatgcatcaatacttgtcaagaaactcaaaaccatttttcgctttctttcacttatacatttt--tttttaatatgt 7224547  T
Q  161 gcaaaatgaataaaagactcgcttat 186  Q
    |  ||||||| ||||||||| |||||    
T  7224548 gtgaaatgaacaaaagactcacttat 7224573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 17342826 - 17342920
Alignment:
Q  10 attataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaa 104  Q
    ||||||||| |||||||||  | ||| || |||||||||||||||||||  |||||  |||||||||||||  ||||||  |||||||| |||||    
T  17342826 attataactctaattaatactacttttatcactctcaattcaatatatttcactttgtatttatgataatggagaatgcaccaatacttaacaaa 17342920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 78
Target Start/End: Complemental strand, 26924200 - 26924162
Alignment:
Q  40 actctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  26924200 actctcaattcaatatattatactttgcatttatgataa 26924162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 35622898 - 35622796
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||| ||||||||||| |||||||||  | |||||||| |  |||||||||||||| |||||| ||||||| | ||   ||||||| |||||||| ||    
T  35622898 tttttttcaattataactctaattaatactactttcataattgccaattcaatatattctactttgcatttatcacaagaaggaatgcatcaatactcga 35622799  T
Q  101 caa 103  Q
    |||    
T  35622798 caa 35622796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 43895850 - 43895912
Alignment:
Q  15 aactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    |||| |||||||||| ||||| || |||||||||||||||||||  ||||| |||||||||||    
T  43895850 aactctaattaatattatttttattactctcaattcaatatattcaactttgcatttatgata 43895912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 16040066 - 16040143
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||| ||||||||||| ||| |||||| | |||||  |||  |||| ||||||||| |||||||||||||||||||    
T  16040066 tttttttcaattataactctaaataatattactttcaccacttccaatacaatatattctactttacatttatgataa 16040143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 128
Target Start/End: Complemental strand, 25819452 - 25819338
Alignment:
Q  12 tataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaagtgctca 111  Q
    ||||||| |||||||||  ||||||||  ||||||||| ||||| || |||||| |||||||||||| | |||||||  |||||  |||||||   ||||    
T  25819452 tataactttaattaatactattttcat--ctctcaatttaatattttctactttgcatttatgataaggaggaatgcaccaataaatgacaaaacactca 25819355  T
Q  112 aaactgtttttctctct 128  Q
    ||| | |||||||||||    
T  25819354 aaattatttttctctct 25819338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 25983747 - 25983670
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||| || |||||||| |||||||||| | |||||| ||||| ||||||| ||||| || ||| ||||||||||||    
T  25983747 tttttttcacttataactttaattaatattaatttcatcactctaaattcaacatattctattttgcatttatgataa 25983670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 105
Target Start/End: Complemental strand, 28706735 - 28706638
Alignment:
Q  9 aattataactataattaatatcattttcataactctcaattcaatatattatacttt-acatttatgataatgtggaatgcctcaatacttgacaaag 105  Q
    |||||||||| |||||||||| | |||||| |||   ||||||||||||| || ||| ||||||||||||| |   ||||| ||||||||||||||||    
T  28706735 aattataactctaattaatataactttcatcactgctaattcaatatattctatttttacatttatgataaagaaaaatgcatcaatacttgacaaag 28706638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 105
Target Start/End: Complemental strand, 37281077 - 37281012
Alignment:
Q  40 actctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaag 105  Q
    |||| |||||||||||||| |||||||||||||||||||    ||||||  |||||||||||||||    
T  37281077 actcccaattcaatatattctactttacatttatgataaaaaagaatgcaccaatacttgacaaag 37281012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 2219566 - 2219490
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||  |||||||| |||||||||  |  |||| ||||  |||||||||||||| |||||||||||||||||||    
T  2219566 tttttccctttataactctaattaatactacgttcacaacttccaattcaatatattttactttacatttatgataa 2219490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 8327706 - 8327782
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    ||||||||  |||||||| |||||||||  | |||||| |||||||||||||||||||  | ||| |||||||||||    
T  8327706 ttttttccctttataactctaattaatactactttcatcactctcaattcaatatattccattttgcatttatgata 8327782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 18186325 - 18186221
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||| ||||||||||| |||||||||  | |||||  |||| ||||||| |||||| ||| ||| |||||||||||    |||||| ||||||||| |    
T  18186325 tttttttcaattataactctaattaatactactttcaccactcccaattcagtatattttacattatatttatgataaaaaagaatgcgtcaatacttaa 18186226  T
Q  101 caaag 105  Q
    |||||    
T  18186225 caaag 18186221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 21304385 - 21304449
Alignment:
Q  13 ataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    |||||| |||||||||| | |||||| ||||| |||||||||||||  ||||| |||||||||||    
T  21304385 ataactgtaattaatattactttcatcactcttaattcaatatatttcactttgcatttatgata 21304449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 44657334 - 44657398
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatacttt 65  Q
    |||||| ||||||||||| |||||||||| |||||||| |||  |||||||||| ||| ||||||    
T  44657334 tttttttcaattataactctaattaatattattttcatcacttgcaattcaatagattctacttt 44657398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 52146767 - 52146699
Alignment:
Q  8 caattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgat 76  Q
    ||||||||||| |||||||||  | ||||| |||||||||||| | ||||| |||||| ||||||||||    
T  52146767 caattataactctaattaatactactttcacaactctcaattcgacatattctactttgcatttatgat 52146699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 40 - 103
Target Start/End: Complemental strand, 27932913 - 27932850
Alignment:
Q  40 actctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaa 103  Q
    ||||||||||||||||||| |||||| |||||||||||| |  ||||||  ||||| |||||||    
T  27932913 actctcaattcaatatattctactttgcatttatgataaagaagaatgcaccaatagttgacaa 27932850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 29678815 - 29678918
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||| ||||||||||| ||||| |||  ||||||||   || ||||||||||||||  ||||| |||||| ||||||   |||||| ||||||||| |    
T  29678815 tttttttcaattataactctaatttataatattttcatcggtcacaattcaatatattcaactttgcatttacgataataatgaatgcatcaatacttaa 29678914  T
Q  101 caaa 104  Q
    ||||    
T  29678915 caaa 29678918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 31634359 - 31634308
Alignment:
Q  54 atattatactttacatttatgataatgtggaatgcctcaatacttgacaaag 105  Q
    ||||| ||||||||||||||||||| | ||||||| ||||||||| ||||||    
T  31634359 atattctactttacatttatgataaagaggaatgcatcaatacttaacaaag 31634308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 34813938 - 34813985
Alignment:
Q  33 tttcataactctcaattcaatatattatactttacatttatgataatg 80  Q
    |||||| | ||||||||||||||||| |||||| ||||||||||||||    
T  34813938 tttcatcattctcaattcaatatattctactttgcatttatgataatg 34813985  T

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Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 50926788 - 50926877
Alignment:
Q  53 tatattatactttacatttatgataatgtggaatgcctcaatacttgacaaagtgc--tcaaaactgtttttctctctctttcgcttatac 141  Q
    |||||| ||||||||||||||||||| |  ||||||  |||||||||||||| |||  |||||||  |||||||||||||||  |||||||    
T  50926788 tatattctactttacatttatgataaagaagaatgcaccaatacttgacaaa-tgcattcaaaaccatttttctctctctttttcttatac 50926877  T

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Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 34987996 - 34987937
Alignment:
Q  12 tataactataattaatatcattttcataactctcaattcaatatattatactttacatttat 73  Q
    ||||||||||||||||||  |||| || ||||  ||||||||||||| ||||||||||||||    
T  34987996 tataactataattaatattttttttatcactc--aattcaatatattttactttacatttat 34987937  T

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Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 5503441 - 5503486
Alignment:
Q  33 tttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||| ||||||||||||||||||||||||||  ||| |||||||    
T  5503441 tttcatcactctcaattcaatatattatactttgaattaatgataa 5503486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 11324237 - 11324294
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatatt 58  Q
    ||||||||  ||||||||||||||||||  |  ||||| |||||||||||||||||||    
T  11324237 ttttttccctttataactataattaatactacattcatcactctcaattcaatatatt 11324294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 11482258 - 11482315
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatatt 58  Q
    ||||||||  ||||||||||||||||||  |  ||||| |||||||||||||||||||    
T  11482258 ttttttccctttataactataattaatactacattcatcactctcaattcaatatatt 11482315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 27698801 - 27698858
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatatt 58  Q
    ||||||||  |||||||| |||||||||| | |||||| | |||||||||||||||||    
T  27698801 ttttttccctttataactctaattaatattactttcatcattctcaattcaatatatt 27698858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 181
Target Start/End: Original strand, 34332217 - 34332277
Alignment:
Q  118 tttttctctctctttcgcttatacttttttcttcttaatatgtgcaaaatgaataaaagactcg 181  Q
    |||||||||||||||| ||||||| |||   |||||||||||||  ||||||| ||||||||||    
T  34332217 tttttctctctctttcacttatacattt---ttcttaatatgtgtgaaatgaacaaaagactcg 34332277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 40 - 105
Target Start/End: Original strand, 37495857 - 37495922
Alignment:
Q  40 actctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaag 105  Q
    |||| |||||||||||||| |||||||||||||| |||| |  ||||||  |||||||||| ||||    
T  37495857 actcccaattcaatatattctactttacatttataataaagaagaatgcaccaatacttgataaag 37495922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 39420573 - 39420650
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||| ||||||||| | |||||||||  | |||||||| ||||||||||| || || |||||| ||||||| ||||    
T  39420573 tttttttcaattataaatctaattaatactactttcataattctcaattcaacatgttttactttgcatttataataa 39420650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 40754500 - 40754455
Alignment:
Q  33 tttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    ||||| ||||||||||| |||||||| |||||| ||||||||||||    
T  40754500 tttcacaactctcaatttaatatattctactttgcatttatgataa 40754455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 50926176 - 50926229
Alignment:
Q  8 caattataactataattaatatcattttcataactctcaattcaatatattata 61  Q
    ||||||||||| |||||||||| |||||||  |||| ||||||||| |||||||    
T  50926176 caattataactctaattaatattattttcaccactcccaattcaatgtattata 50926229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15290482 - 15290542
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattata 61  Q
    |||||| |||||||||||||||||||||  | |||||| |||  | |||||||||||||||    
T  15290482 tttttttcaattataactataattaataatactttcatcacttcccattcaatatattata 15290542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 78
Target Start/End: Original strand, 50086043 - 50086075
Alignment:
Q  46 aattcaatatattatactttacatttatgataa 78  Q
    ||||||||||||| |||||||||||||||||||    
T  50086043 aattcaatatattctactttacatttatgataa 50086075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 52432311 - 52432403
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaa 103  Q
    |||||||| |||||||| | | ||||| ||||  ||||||||||||||  |||||||||||||| || |   |||||| ||||||||| ||||    
T  52432311 ttataactctaattaatgttactttcacaacttacaattcaatatatttcactttacatttatggtagtaaagaatgcatcaatacttaacaa 52432403  T

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Target: scaffold0086 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 5807 - 5911
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    ||||||||| |||||||| |||||||||  | |||||  ||||||||||||||||||| ||||||||||||||||||| | | ||||| |||||||||||    
T  5807 ttttttccatttataactttaattaatactactttcaccactctcaattcaatatattctactttacatttatgataaagagcaatgcatcaatacttga 5906  T
Q  101 caaag 105  Q
     ||||    
T  5907 taaag 5911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 1e-21; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 33018062 - 33017958
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||||||||||||||| |||||||||  | |||||  |||| |||||||||||||| ||||||||||||||||||| |  ||||||  ||||||||||    
T  33018062 ttttttccaattataactctaattaatactactttcaccactcccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttga 33017963  T
Q  101 caaag 105  Q
    |||||    
T  33017962 caaag 33017958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 33921587 - 33921510
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||||||||||||| |||||||||  | ||| | ||||| |||||||||||||| |||||||||||||||||||    
T  33921587 ttttttccaattataactctaattaatactacttttacaactcccaattcaatatattctactttacatttatgataa 33921510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 34803825 - 34803749
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    |||||| |||||||||||||||||||||  | ||||| |||||||||||||||||||| || ||| |||||||||||    
T  34803825 tttttttcaattataactataattaatactactttcacaactctcaattcaatatattttattttgcatttatgata 34803749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 14312766 - 14312663
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||| ||| ||||||| |||||||||  || ||||| ||||||||||||||| |||  ||||||||||||||||||||  ||||||  |||||||| |    
T  14312766 tttttttcaaatataactctaattaataatatgttcatcactctcaattcaatacatttcactttacatttatgataatggagaatgcaccaatacttaa 14312667  T
Q  101 caaa 104  Q
    ||||    
T  14312666 caaa 14312663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 8232428 - 8232352
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||||||||||| | |||||||||  | ||||| || ||||||||||||||||| |||||||||||||||||||    
T  8232428 ttttttccaattataattctaattaatagtactttcacaagtctcaattcaatatatt-tactttacatttatgataa 8232352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 16126213 - 16126277
Alignment:
Q  14 taactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||||||||||| ||||||||  ||  ||||||||||||||||||||| ||||||||||||    
T  16126213 taactataattaatattattttcatctcttccaattcaatatattatactttgcatttatgataa 16126277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 31265778 - 31265918
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaa-agtgct 109  Q
    |||||||| |||||||||| | ||||| ||||  ||||||||||||||  ||||||||||||||||| ||  ||||||  |||||||| |||| ||  ||    
T  31265778 ttataactctaattaatattactttcacaacttccaattcaatatattccactttacatttatgatagtggagaatgcaccaatacttaacaagagcact 31265877  T
Q  110 caaaactgtttttctctctctttcgcttatacttttttctt 150  Q
     |||||| |||||||||||| |||  |||||| ||| ||||    
T  31265878 taaaactatttttctctctccttcatttatacatttgtctt 31265918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 14306359 - 14306256
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||| ||| ||||||| |||||||||  || ||||| |||||||||| |||| |||  ||||||||||||||||||||  ||||||  |||||||| |    
T  14306359 tttttttcaaatataactctaattaataatatgttcatcactctcaatttaatacatttcactttacatttatgataatggagaatgcaccaatacttaa 14306260  T
Q  101 caaa 104  Q
    ||||    
T  14306259 caaa 14306256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 31723483 - 31723558
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgat 76  Q
    |||||| ||||||||| |||||||||||| |||||||| | |||||||||||||||||  | |||| |||||||||    
T  31723483 tttttttcaattataattataattaatattattttcattattctcaattcaatatattccaatttatatttatgat 31723558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 9755255 - 9755189
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    |||||||| |||||||||| |||||||| | | ||||||||||||||| |||| |||||||||||||    
T  9755255 ttataactgtaattaatattattttcatcattttcaattcaatatattctactctacatttatgata 9755189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 2310406 - 2310329
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||| ||||||||||  |||||||||  | |||||| |||| |||||||||||||||||| || ||||||||||||    
T  2310406 tttttttcaattataacattaattaatactactttcatcactcccaattcaatatattataccttgcatttatgataa 2310329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 15371981 - 15371904
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||||||||||||||  |||||||||  | |||||  |||| |||||||||||||| |||||| ||||||||||||    
T  15371981 ttttttccaattataacactaattaatactactttcaccactcccaattcaatatattctactttgcatttatgataa 15371904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 3874167 - 3874064
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    ||||||||||||||| ||||||| ||||| | |||||  ||||  |||||||||||||  |||||||||||||||||| |   |||||  ||||||||||    
T  3874167 ttttttccaattatatctataat-aatattactttcactactcctaattcaatatattcaactttacatttatgataaagaataatgcaccaatacttga 3874069  T
Q  101 caaag 105  Q
    |||||    
T  3874068 caaag 3874064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 7301198 - 7301119
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatg 80  Q
    ||||||||  |||||||| ||| |||||| | |||||| | | |||||||||||||||  ||||||||||||||||||||    
T  7301198 ttttttccctttataactctaactaatattactttcatcattttcaattcaatatattccactttacatttatgataatg 7301119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 42 - 104
Target Start/End: Complemental strand, 7739595 - 7739533
Alignment:
Q  42 tctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaa 104  Q
    |||||||||||||| || |||||||||||||| ||||||  |||||| ||||||||| |||||    
T  7739595 tctcaattcaatatcttctactttacatttataataatggtgaatgcatcaatacttaacaaa 7739533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 15321343 - 15321266
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    ||||||| |||||||||  |||||||||  | |||||  | ||||||||||||||||| |||||| ||||||||||||    
T  15321343 ttttttctaattataacactaattaatactactttcaacattctcaattcaatatattctactttgcatttatgataa 15321266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 20383843 - 20383971
Alignment:
Q  9 aattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaaagtgc 108  Q
    |||||||||| |||||||||||| ||| |  |||  ||||||| |||||| || ||| |||||| ||||||| |||||||  |||||||||||||    |    
T  20383843 aattataactctaattaatatcactttaagtacttccaattca-tatattctatttttcatttaagataatgaggaatgcaccaatacttgacaagacac 20383941  T
Q  109 tcaaaactgtttttctctctctttcgctta 138  Q
    |||||||  ||||| |||||||||| ||||    
T  20383942 tcaaaaccatttttttctctctttcactta 20383971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 28538985 - 28539062
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    |||||| ||||||||||| ||||||||| || |||||| ||| | |||| |||||||| |||||| ||||||| ||||    
T  28538985 tttttttcaattataactctaattaataccactttcatcacttttaatttaatatattctactttgcatttataataa 28539062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 3604718 - 3604586
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    ||||||||  |||||||| |||||||||| | ||||| ||||  ||||||||||||||  ||||| ||||||  ||||||  ||||||  |||||||| |    
T  3604718 ttttttccctttataactctaattaatattactttcacaacttccaattcaatatattccactttgcatttacaataatggagaatgcaccaatacttaa 3604619  T
Q  101 caa-agtgctcaaaactgtttttctctctcttt 132  Q
    ||| ||  || |||||  |||||||||||||||    
T  3604618 caagagaacttaaaaccatttttctctctcttt 3604586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 30064067 - 30063995
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttat 73  Q
    ||||||||  |||||||| |||||||||| | |||||| |||| ||||||||||||||  ||||| |||||||    
T  30064067 ttttttccctttataactctaattaatattactttcatcactcccaattcaatatattccactttgcatttat 30063995  T

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Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 8569857 - 8569787
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacattt 71  Q
    ||||||||||||||| || |||||||||| | |||||  |||||||||| ||||||||  ||||| |||||    
T  8569857 ttttttccaattatagctctaattaatattactttcaccactctcaatttaatatatttcactttgcattt 8569787  T

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Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 2657890 - 2657959
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatt 70  Q
    |||||||||| ||||| | |||||||||| | |||||| |||  ||||||||||||||  ||||||||||    
T  2657890 ttttttccaaatataattctaattaatattactttcatcacttccaattcaatatatttcactttacatt 2657959  T

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Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 15325136 - 15325213
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    ||||||||||||||||   |||||||||  | |||||  ||||||||| ||||||||| |||||| |||||| |||||    
T  15325136 ttttttccaattataatactaattaatactagtttcaccactctcaatccaatatattctactttgcatttacgataa 15325213  T

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Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 33109362 - 33109419
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatatt 58  Q
    ||||||||| |||||||| |||||||||  | |||||| | |||||||||||||||||    
T  33109362 ttttttccatttataactctaattaatactactttcatcattctcaattcaatatatt 33109419  T

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Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 34441881 - 34441950
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacattt 71  Q
    ||||| ||||||||||| |||||||||  | |||||| ||||| |||| |||||||| || |||||||||    
T  34441881 ttttttcaattataactttaattaatactactttcatcactcttaatttaatatattctaatttacattt 34441950  T

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Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 117083 - 117143
Alignment:
Q  16 actataattaatatcattttcataactctcaattcaatatattatactttacatttatgat 76  Q
    |||||||||||||  | |||||| |||||||||||||||||||  |||||  |||||||||    
T  117083 actataattaatactactttcatcactctcaattcaatatattccactttgtatttatgat 117143  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 15081412 - 15081488
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    ||||||||  |||||||| |||||||||  | |||||||| |  ||||||||||||||  ||||||| |||||||||    
T  15081412 ttttttccctttataactctaattaatactactttcataatttccaattcaatatattccactttacgtttatgata 15081488  T

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Target: scaffold0003 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 352578 - 352475
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgac 101  Q
    ||||||||||||||||| || ||||||| | |||||  |||| |||||||||||||| ||||||||||||||||||| |  ||||||  |||||||| ||    
T  352578 tttttccaattataactctatttaatattactttcactactcccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttaac 352479  T
Q  102 aaag 105  Q
    ||||    
T  352478 aaag 352475  T

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Target: scaffold0155 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 8072 - 7995
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    ||||| |||||||||||| |||||||||  | ||||| || ||||||||||||||||| |||||||||||||||||||    
T  8072 tttttcccaattataactttaattaatactactttcacaattctcaattcaatatattttactttacatttatgataa 7995  T

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Target: scaffold0034 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 98815 - 98886
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttat 73  Q
    |||||||  |||||||| |||||||||| |||||||| |||||||||||||||||||  |||||| ||||||    
T  98815 tttttccctttataactctaattaatattattttcatcactctcaattcaatatattccactttatatttat 98886  T

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Target: scaffold0020 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 171215 - 171294
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatg 80  Q
    |||||| |||||||||||   |||||||| | |||||| ||||  ||||||||||||| |||||||||||||||||||||    
T  171215 tttttttcaattataactcatattaatattactttcatcactcctaattcaatatattctactttacatttatgataatg 171294  T

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Target: scaffold0096 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 4340 - 4295
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatata 56  Q
    |||||||| |||||||||| |||||||| |||||||||||||||||    
T  4340 ttataactttaattaatattattttcatcactctcaattcaatata 4295  T

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Target: scaffold0058 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 14445 - 14542
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatactt 98  Q
    ||||||||  |||||||| |||||||||  | |||||| | | |||||||||||||||  ||||||||||||||| | ||  |||||| |||||||||    
T  14445 ttttttccttttataactctaattaatactactttcatcattttcaattcaatatattccactttacatttatgacagtggagaatgcatcaatactt 14542  T

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Target: scaffold0262 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 12554 - 12450
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttga 100  Q
    |||||| | ||||||||| |||||||||  | |||||  | ||| ||||||||||||| |||||||||||||| |||| |  ||||||   |||||||||    
T  12554 ttttttacgattataactctaattaatactactttcaccattcttaattcaatatattctactttacatttataataaagaagaatgcactaatacttga 12455  T
Q  101 caaag 105  Q
    |||||    
T  12454 caaag 12450  T

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Target: scaffold0028 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 26603 - 26678
Alignment:
Q  2 tttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    |||||||| |||||| | |||||||||  | |||||| |||| ||||||||||||||  ||||| |||||||||||    
T  26603 tttttccatttataattctaattaatactactttcatcactcgcaattcaatatattccactttgcatttatgata 26678  T

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Target: scaffold0321 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 9657 - 9511
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaa-agtgct 109  Q
    |||||||| |||||||||  | |||||| |||||||||||   |||||  ||||| ||||||||||||||  |||| | | ||||||| |||| ||  ||    
T  9657 ttataactctaattaatactactttcatcactctcaattc---atattccactttgcatttatgataatggagaatacattaatacttaacaagagcact 9561  T
Q  110 caaaactgtttttctctctctttcgcttatacttttttcttcttaatatgtg 161  Q
     |||||  |||||||||||| |||  |||||||||||  |||||||||||||    
T  9560 taaaaccatttttctctctccttcatttatacttttt--ttcttaatatgtg 9511  T

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Target: scaffold0221 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 8886 - 8948
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttat 73  Q
    |||||||| |||||||||| | |||||| | |||||||||||||||||  ||||| |||||||    
T  8886 ttataactctaattaatattactttcatcattctcaattcaatatattccactttgcatttat 8948  T

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Target: scaffold0221; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 10909 - 10832
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataa 78  Q
    ||||||||||||||||   |||||||||  | |||||  ||||  ||||||||||||| |||||| ||||||||||||    
T  10909 ttttttccaattataaaactaattaatactactttcaccactcctaattcaatatattttactttgcatttatgataa 10832  T

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Target: scaffold0654 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2776 - 2719
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatatt 58  Q
    |||||| ||||||||||| |||||||||  | |||||| ||||||||||||| |||||    
T  2776 tttttttcaattataactctaattaatactaatttcatcactctcaattcaacatatt 2719  T

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Target: scaffold0045 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 26311 - 26387
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    ||||||||  |||||||| |||||||||| | ||| || | |  ||||||||||||||  |||||||||||||||||    
T  26311 ttttttccttttataactctaattaatattacttttatcatttccaattcaatatattccactttacatttatgata 26387  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 229822 - 229914
Alignment:
Q  11 ttataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgataatgtggaatgcctcaatacttgacaa 103  Q
    |||||||| |||||||||  | ||||| ||||  |||||||||||||   ||||| ||||||||||||||  ||||||  |||||||| ||||    
T  229822 ttataactctaattaatactactttcacaacttccaattcaatatataccactttgcatttatgataatggagaatgcaccaatacttaacaa 229914  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 394767 - 394843
Alignment:
Q  1 ttttttccaattataactataattaatatcattttcataactctcaattcaatatattatactttacatttatgata 77  Q
    ||||||||  |||||||| |||||||||  | |||||| |||||||||||| ||||||  |||||  ||||||||||    
T  394767 ttttttccctttataactctaattaatactactttcatcactctcaattcactatattccactttgtatttatgata 394843  T

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