View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4820-Insertion-6 (Length: 149)
Name: NF4820-Insertion-6
Description: NF4820
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4820-Insertion-6 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 126; Significance: 2e-65; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 126; E-Value: 2e-65
Query Start/End: Original strand, 8 - 149
Target Start/End: Original strand, 42758288 - 42758429
Alignment:
| Q |
8 |
actataacaatgcaatccctccttcaaaatcttttcttctttggagaatcttgcacaacaagttaccaagtgacgagaacttgtctagtagaggttgttt |
107 |
Q |
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| T |
42758288 |
actataacaatgcaatccctccttcaaaatctcttcttctttggagaatcttgcacaacaagttaccaagtgacgagaacttgtttagtagaggttgttt |
42758387 |
T |
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| Q |
108 |
gcttccttccatgtgcaaccttttgcctttgtggcaatcaag |
149 |
Q |
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| T |
42758388 |
gcttccttccatgtgcaacattttacctttgtggcaatcaag |
42758429 |
T |
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