View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4821-Insertion-2 (Length: 1018)
Name: NF4821-Insertion-2
Description: NF4821
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4821-Insertion-2 |
 | |
|
| [»] scaffold1408 (3 HSPs) |
| | |
|
| [»] scaffold0428 (4 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 765; Significance: 0; HSPs: 31)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 765; E-Value: 0
Query Start/End: Original strand, 8 - 855
Target Start/End: Original strand, 33644505 - 33645346
Alignment:
| Q |
8 |
ccttcccctaccactattgggcgggaacgagatgagaatgacgatgtctggatttcaggattggtcattttcaactgttcaaaattgggtgagagggaac |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33644505 |
ccttcccctaccactattgggcgggaacgagatgagaatgacgatgtctggatttcaggattggtcattttcaactgttcaaaattgggtgagagggaac |
33644604 |
T |
|
| Q |
108 |
gttgcaggagcatgacattttcatggatgatacaattcattcaggcaaacctgcaatcctacccaacctactttgataggactcaaattgtaactccagg |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33644605 |
gttgcaggagcatgacattttcatggatgatacaattcattcaggcaaacctacaatcctacccaacctactttgataggactcaaattgtaactccagg |
33644704 |
T |
|
| Q |
208 |
aagtgaaataccaagttggatcaacaatcaaagtgtgggtgattcaatacaaatagacgaatctcctattatgcatgacaataacaataatatcattgga |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33644705 |
aagtgaaataccaagttggatcaacaatcaaagtgtgggttattcaatacaaatagacgaatctcctattatgcatgacaataacaataatatcattgga |
33644804 |
T |
|
| Q |
308 |
tttgtatgttgtgcagtatttaccatggcaccacgtcgtaggcgggttccatcgtcgaccattatggaactagttttacctaagaattcctatatgaatt |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33644805 |
tttgtatgttgtgcagtatttaccatggcaccacgtcgtaggcgggttccatcgtcgaccattatggaactagttttacctaagaattcctatatgaatt |
33644904 |
T |
|
| Q |
408 |
tttggaaaataagtgttccggtaattctcgatggtggtcttattacgaccaaatcaagtcacctatggataatctacttccctcgagattcctataatga |
507 |
Q |
| |
|
|||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33644905 |
tttggagaataagtgttccagtaattctcgatggtggtcttattacgaccaaatcaagtcacctatggataatctacttccctcgagattcctataatga |
33645004 |
T |
|
| Q |
508 |
atttggaaaaatccattttgacatttttgagggggaaggtttgggtatgaaggtgaagagttgtgggtatcgttgggtatgtaaacaagacctacaatag |
607 |
Q |
| |
|
|||||||| |||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33645005 |
atttggaagaatctattttgacatttttgagagggaaggtctgggtatgaaggtgaagagttgtgggtatcgttgggtatgtaaacaagacctacaatag |
33645104 |
T |
|
| Q |
608 |
ttcaacttaacaatgatgaatcacaaaaatatccttagctccgaagtgtaaggtttgggtatgaagatgaggcagaaccacaaccgcagccataaccact |
707 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33645105 |
ttcaacttaacaatgatgaatcacaaaaatatccttagctccgaagtgtaaggtttgggtatgaagatgaggcagaaccacaaccgcagccataaccact |
33645204 |
T |
|
| Q |
708 |
tcacagataagaaggtaatgaagagtctcaacaaattgaacaagaatcatctatctgttgccacctactcattgggttgtcatcaacctggcaaaataca |
807 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||| |
|
|
| T |
33645205 |
tcacagataagaaggtaatgaagagtctcaacaaattgaacaagaatcatctatctgttgccacctactcatt-gtttgtcatcaacct-gcaaaataca |
33645302 |
T |
|
| Q |
808 |
aacatatttttcatggggtatatgttctggctttcataccatgaagtg |
855 |
Q |
| |
|
|||||| ||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
33645303 |
aacata-ttttcat-gggtatatgttctg--cttcataccatgaagtg |
33645346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 169; E-Value: 4e-90
Query Start/End: Original strand, 63 - 339
Target Start/End: Complemental strand, 33304472 - 33304196
Alignment:
| Q |
63 |
caggattggtcattttcaactgttcaaaattgggtgagagggaacgttgcaggagcatgacattttcatggatgatacaattcattcaggcaaacctgca |
162 |
Q |
| |
|
|||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||| |||||||| || |
|
|
| T |
33304472 |
caggattgttcattttcaactgtccaaaattgggtgagagggaacgttgcagtagcatgacattttcatggttgacacaattcattgaggcaaactcaca |
33304373 |
T |
|
| Q |
163 |
atcctacccaacctactttgataggactcaaattgtaactccaggaagtgaaataccaagttggatcaacaatcaaagtgtgggtgattcaatacaaata |
262 |
Q |
| |
|
||||||||| || | ||||||| ||| ||||||||| |||||||||| ||||||||||| ||||||||||||| | || ||||||||||||||||||||| |
|
|
| T |
33304372 |
atcctaccctacgtcctttgattggattcaaattgttactccaggaaatgaaataccaatttggatcaacaataagagcgtgggtgattcaatacaaata |
33304273 |
T |
|
| Q |
263 |
gacgaatctcctattatgcatgacaataacaataatatcattggatttgtatgttgtgcagtatttaccatggcacc |
339 |
Q |
| |
|
||| |||||||||||||||||||||||||||| |||||||||| ||| |||||||||| |||||| |||||||||| |
|
|
| T |
33304272 |
gaccgatctcctattatgcatgacaataacaattatatcattggctttctatgttgtgcggtattttccatggcacc |
33304196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 168; E-Value: 2e-89
Query Start/End: Original strand, 8 - 335
Target Start/End: Complemental strand, 33399097 - 33398788
Alignment:
| Q |
8 |
ccttcccctaccactattgggcgggaacgagatgagaatgacgatgtctggatttcaggattggtcattttcaactgttcaaaattgggtgagagggaac |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33399097 |
ccttcccctaccactattgggcgggaacgagatgagaatgacgatgactggatttcaggattggtcattttcaactgttcaaaattgggtgagagggaac |
33398998 |
T |
|
| Q |
108 |
gttgcaggagcatgacattttcatggatgatacaattcattcaggcaaacctgcaatcctacccaacctactttgataggactcaaattgtaactccagg |
207 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||| ||| || | |||||| |||| |||||||||| | |||||| |
|
|
| T |
33398997 |
gttgcagtagcatgacattttcatggatgatacaattcattctggccaatccacaatcc------acct------------ctcaaattgttattccagg |
33398916 |
T |
|
| Q |
208 |
aagtgaaataccaagttggatcaacaatcaaagtgtgggtgattcaatacaaatagacgaatctcctattatgcatgacaataacaataatatcattgga |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||| | | | | |
|
|
| T |
33398915 |
aagtgaaataccaagttggatcaacaatcagtgtgtgggtgattcaatacaaatagacctatctcctgctatgcatgataataacaatcagagccattac |
33398816 |
T |
|
| Q |
308 |
tttgtatgttgtgcagtatttaccatgg |
335 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
33398815 |
tttgtatgttgtgcagtatttaccatgg |
33398788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 145; E-Value: 9e-76
Query Start/End: Original strand, 63 - 339
Target Start/End: Complemental strand, 33262614 - 33262338
Alignment:
| Q |
63 |
caggattggtcattttcaactgttcaaaattgggtgagagggaacgttgcaggagcatgacattttcatggatgatacaattcattcaggcaaacctgca |
162 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||||| ||| ||| || |
|
|
| T |
33262614 |
caggattggtcattttcaactgtccaaaattgggtgagagggaacgttgcagtagcatgacattttcatggacgacacaattcattcaagcataccaaca |
33262515 |
T |
|
| Q |
163 |
atcctacccaacctactttgataggactcaaattgtaactccaggaagtgaaataccaagttggatcaacaatcaaagtgtgggtgattcaatacaaata |
262 |
Q |
| |
|
||||||||| || || || ||| | ||||||||| | |||||||| ||||||||||||||||||||||||||| || ||||||||||||||| | || |
|
|
| T |
33262514 |
atcctaccctacttatttggatgagtttcaaattgttagtccaggaaatgaaataccaagttggatcaacaatcagagcatgggtgattcaataccagta |
33262415 |
T |
|
| Q |
263 |
gacgaatctcctattatgcatgacaataacaataatatcattggatttgtatgttgtgcagtatttaccatggcacc |
339 |
Q |
| |
|
||| || |||||||||||||||| |||||||||||||||||||| ||| ||||||||| |||||| ||||| |||| |
|
|
| T |
33262414 |
gaccaaactcctattatgcatgataataacaataatatcattggctttctatgttgtgttgtattttccatgacacc |
33262338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 145; E-Value: 9e-76
Query Start/End: Original strand, 63 - 335
Target Start/End: Complemental strand, 33388142 - 33387870
Alignment:
| Q |
63 |
caggattggtcattttcaactgttcaaaattgggtgagagggaacgttgcaggagcatgacattttcatggatgatacaattcattcaggcaaacctgca |
162 |
Q |
| |
|
|||||||| || ||||||||||| ||||| ||||||| ||||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||| || |
|
|
| T |
33388142 |
caggattgatcgttttcaactgtccaaaactgggtgatagggagtgttgcagtagcatgacattttcatggatgacacaatttattaaggcaaaccgaca |
33388043 |
T |
|
| Q |
163 |
atcctacccaacctactttgataggactcaaattgtaactccaggaagtgaaataccaagttggatcaacaatcaaagtgtgggtgattcaatacaaata |
262 |
Q |
| |
|
| ||||||| |||| ||||||| || ||||||||| ||| |||||||||||||||| ||||||||||||||||| || ||||||||||||||| |||| |
|
|
| T |
33388042 |
aacctaccctgcctattttgatacgattcaaattgttactacaggaagtgaaataccgagttggatcaacaatcagagcatgggtgattcaatactaata |
33387943 |
T |
|
| Q |
263 |
gacgaatctcctattatgcatgacaataacaataatatcattggatttgtatgttgtgcagtatttaccatgg |
335 |
Q |
| |
|
||| ||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||| |
|
|
| T |
33387942 |
gacaaattgcctattatgcatgacaataacaataatatcattggctttctatgttgtgcagtatttacaatgg |
33387870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 413 - 659
Target Start/End: Complemental strand, 33387810 - 33387565
Alignment:
| Q |
413 |
aaaataagtgttccggtaattctcgatggtggtcttattacgaccaaatcaagtcacctatggataatctacttccctcgagattcctataatgaatttg |
512 |
Q |
| |
|
||||| |||||||| || |||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||| |
|
|
| T |
33387810 |
aaaatgagtgttccagtcattctcaatggaggtcttgttacgaccaaatcaagtcacctatggataatctacttcccacgagagtcctcggatgaatttg |
33387711 |
T |
|
| Q |
513 |
gaaaaatccattttgacatttttgagggggaaggtttgggtatgaaggtgaagagttgtgggtatcgttgggtatgtaaacaagacctacaatagttcaa |
612 |
Q |
| |
|
|||| ||| ||||||||||||| ||||| ||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| | ||||| |
|
|
| T |
33387710 |
gaaatatctgttttgacatttttaaggggcaagctttgggtatggaggtgaagagttgcgggtatcgttgggtatgtaaacaagacctacaagaattcaa |
33387611 |
T |
|
| Q |
613 |
cttaacaatgatgaatcacaaaaatatccttagctccgaagtgtaag |
659 |
Q |
| |
|
|||| ||||||| |||||| ||||| ||||| ||||||||||||||| |
|
|
| T |
33387610 |
cttaccaatgataaatcacgaaaat-tccttggctccgaagtgtaag |
33387565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 63 - 339
Target Start/End: Complemental strand, 9166740 - 9166473
Alignment:
| Q |
63 |
caggattggtcattttcaactgttcaaaattgggtgagagggaacgttgcaggagcatgacattttcatggatgatacaattcattcaggcaaacctgca |
162 |
Q |
| |
|
||||||||||||||||||||||| || ||||| |||| | ||||| |||||| ||||||||||||||||||||||| ||||| ||||||||||||| || |
|
|
| T |
9166740 |
caggattggtcattttcaactgtccagaattgagtgataaggaacattgcagtagcatgacattttcatggatgatgcaatttattcaggcaaacc--ca |
9166643 |
T |
|
| Q |
163 |
atcctacccaacctactttgataggactcaaattgtaactccaggaagtgaaataccaagttggatcaacaatcaaagtgtgggtgattcaatacaaata |
262 |
Q |
| |
|
||| || |||||||||||| ||||||||| || ||||||| |||||||||||||||||||||||||| || |||| || ||| |||| |||| |
|
|
| T |
9166642 |
-------ccatcccactttgataggattcaaattgttacgccaggaattgaaataccaagttggatcaacaatcggagcgtggatggttcgataccaata |
9166550 |
T |
|
| Q |
263 |
gacgaatctcctattatgcatgacaataacaataatatcattggatttgtatgttgtgcagtatttaccatggcacc |
339 |
Q |
| |
|
||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
9166549 |
gacctaactcctattatgcatgacaataacaataatatcattggctttgtatgttgtgcagtattctccatggcacc |
9166473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 67 - 339
Target Start/End: Complemental strand, 33285581 - 33285306
Alignment:
| Q |
67 |
attggtcattttcaactgttcaaaattgggtgagagggaacgttgcaggagcatgacattttcatggatgatacaattcattcaggcaaacctgcaatcc |
166 |
Q |
| |
|
||||||||||||||||||| ||||||| ||||| |||||||||||||| |||||| ||||||||||||||||||||||||| |||||| ||| || | |
|
|
| T |
33285581 |
attggtcattttcaactgtccaaaattaggtgaaagggaacgttgcagtagcatggcattttcatggatgatacaattcatccaggcataccaacacttt |
33285482 |
T |
|
| Q |
167 |
tacccaacctactt---tgataggactcaaattgtaactccaggaagtgaaataccaagttggatcaacaatcaaagtgtgggtgattcaatacaaatag |
263 |
Q |
| |
|
||||| | | ||| ||| ||| ||| ||||| ||||||||||||||||||||||||||||| || ||||| || |||||| |||||||| ||||| |
|
|
| T |
33285481 |
taccctgcgtccttatttgaagggattcatattgttactccaggaagtgaaataccaagttggattaataatcagagcgtgggtagttcaataccaatag |
33285382 |
T |
|
| Q |
264 |
acgaatctcctattatgcatgacaataacaataatatcattggatttgtatgttgtgcagtatttaccatggcacc |
339 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| || ||||||| |
|
|
| T |
33285381 |
acagatctcctattatgcatgacaataacaataatatcattggctttgtatgttgtgcagtgttttccgtggcacc |
33285306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 445 - 659
Target Start/End: Complemental strand, 33285215 - 33285002
Alignment:
| Q |
445 |
tcttattacgaccaaatcaagtcacctatggataatctacttccctcgagattcctataatgaatttggaaaaatccattttgacatttttgagggggaa |
544 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||| || || |||| |||||| || |||||| ||||||| || | ||||| ||| ||| ||| |
|
|
| T |
33285215 |
tcttattacgaccaaatcaagtcatctatggataatctacctctctagagagtcctatgataaatttgaaaaaatcagttgttacattgttgggggtgaa |
33285116 |
T |
|
| Q |
545 |
ggtttgggtatgaaggtgaagagttgtgggtatcgttgggtatgtaaacaagacctacaatagttcaacttaacaatgatgaatcacaaaaatatcctta |
644 |
Q |
| |
|
| |||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
33285115 |
gatttgggtatggaggtgaacagttgtggatatcgttgggtatgtaaacaagacctacaagagttcaatttaacaatgatgaatcac-aaaatatccttg |
33285017 |
T |
|
| Q |
645 |
gctccgaagtgtaag |
659 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
33285016 |
gctccgaagtgtaag |
33285002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 63 - 320
Target Start/End: Original strand, 28870189 - 28870446
Alignment:
| Q |
63 |
caggattggtcattttcaactgttcaaaattgggtgagagggaacgttgcaggagcatgacattttcatggatgatacaattcattcaggcaaacctgca |
162 |
Q |
| |
|
|||| ||| |||||||||||||| |||| || ||||||||||||||||| | |||||| ||||||||||||||| ||||||||||| |||| ||| || |
|
|
| T |
28870189 |
caggtttgatcattttcaactgtccaaatttaggtgagagggaacgttgttgtagcatggcattttcatggatgaaacaattcattcgggcataccgaca |
28870288 |
T |
|
| Q |
163 |
atcctacccaacctactttgataggactcaaattgtaactccaggaagtgaaataccaagttggatcaacaatcaaagtgtgggtgattcaatacaaata |
262 |
Q |
| |
|
|||||||| ||| || ||| | | | ||||| ||||||||||||||||||||||||||||| |||||||| || |||||| ||||||||||||| |
|
|
| T |
28870289 |
atcctaccttgtctatttggatgcgtttaatattgttactccaggaagtgaaataccaagttggattaacaatcagagcatgggtggttcaatacaaata |
28870388 |
T |
|
| Q |
263 |
gacgaatctcctattatgcatgacaataacaataatatcattggatttgtatgttgtg |
320 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
28870389 |
gacgaatctcctattataaatgacaataacaataatatcattggctttgtatgttgtg |
28870446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 115; E-Value: 7e-58
Query Start/End: Original strand, 428 - 630
Target Start/End: Complemental strand, 33304119 - 33303917
Alignment:
| Q |
428 |
gtaattctcgatggtggtcttattacgaccaaatcaagtcacctatggataatctacttccctcgagattcctataatgaatttggaaaaatccattttg |
527 |
Q |
| |
|
||||||||| |||| |||||| ||| |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| ||||||||||||| |
|
|
| T |
33304119 |
gtaattctcaatggaggtcttgttatgaccaaatcaagtcacctatggataatctacttcccccgagagtcctatagtgaatttgaaaaaatccatttta |
33304020 |
T |
|
| Q |
528 |
acatttttgagggggaaggtttgggtatgaaggtgaagagttgtgggtatcgttgggtatgtaaacaagacctacaatagttcaacttaacaatgatgaa |
627 |
Q |
| |
|
| ||||||||||| |||| ||| || || ||||||||||||| |||||||| |||||||||||| ||||||| ||| | |||||||||||||||||||| |
|
|
| T |
33304019 |
atatttttgagggtgaagattttagtttggaggtgaagagttgcgggtatcggtgggtatgtaaagaagacctgcaagaattcaacttaacaatgatgaa |
33303920 |
T |
|
| Q |
628 |
tca |
630 |
Q |
| |
|
||| |
|
|
| T |
33303919 |
tca |
33303917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 63 - 339
Target Start/End: Complemental strand, 33057554 - 33057290
Alignment:
| Q |
63 |
caggattggtcattttcaactgttcaaaattgggtgagagggaacgttgcaggagcatgacattttcatggatgatacaattcattcaggcaaacctgca |
162 |
Q |
| |
|
|||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||| |||||||| |||||||||| ||||||||| | |
|
|
| T |
33057554 |
caggattgctcattttcaactgtccaaaattgggtgagagggaacattgcaggagcatgacacttttatggatgaaacaattcattaaggcaaacccacg |
33057455 |
T |
|
| Q |
163 |
atcctacccaacctactttgataggactcaaattgtaactccaggaagtgaaataccaagttggatcaacaatcaaagtgtgggtgattcaatacaaata |
262 |
Q |
| |
|
|||| || || ||| |||||| || | |||||||||||||||||||||||||||||||||||| || ||||| |||||||| |||| |
|
|
| T |
33057454 |
ttcct-------cttctgagat-----tcaaatagttaatccaggaagtgaaataccaagttggatcaacaatcagaggatgggttattcaatagcaata |
33057367 |
T |
|
| Q |
263 |
gacgaatctcctattatgcatgacaataacaataatatcattggatttgtatgttgtgcagtatttaccatggcacc |
339 |
Q |
| |
|
||| ||||||||||| |||||||||| |||||||||||||||| ||||||||||||||| |||||| |||||||| |
|
|
| T |
33057366 |
gaccgatctcctattaggcatgacaatgacaataatatcattggtattgtatgttgtgcagcatttacgatggcacc |
33057290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 454 - 623
Target Start/End: Complemental strand, 9166358 - 9166189
Alignment:
| Q |
454 |
gaccaaatcaagtcacctatggataatctacttccctcgagattcctataatgaatttggaaaaatccattttgacatttttgagggggaaggtttgggt |
553 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |||| ||||| ||||| ||||||||||||||||||||||||||||| || ||| |||||||||| | |
|
|
| T |
9166358 |
gaccaaatccagtcacctatggataatctacctcccccgagagtcctacgatgaatttggaaaaatccattttgacattattcggggtgaaggtttggat |
9166259 |
T |
|
| Q |
554 |
atgaaggtgaagagttgtgggtatcgttgggtatgtaaacaagacctacaatagttcaacttaacaatga |
623 |
Q |
| |
|
||||||||||||| |||||| || ||||||||||||||||||||||||||| ||||||||||||| |||| |
|
|
| T |
9166258 |
atgaaggtgaagacttgtggataccgttgggtatgtaaacaagacctacaagagttcaacttaacgatga |
9166189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 64 - 339
Target Start/End: Complemental strand, 33409959 - 33409690
Alignment:
| Q |
64 |
aggattggtcattttcaactgttcaaaattgggtgagagggaacgttgcaggagcatgacattttcatggatgatacaattcattcaggcaaacctgcaa |
163 |
Q |
| |
|
||||||| |||||||||||||| ||||||||| |||||||||||||||||| ||||| ||| ||||||||||| ||| |||||||||||||||| ||| |
|
|
| T |
33409959 |
aggattgttcattttcaactgtccaaaattggttgagagggaacgttgcagtagcatcacaatttcatggatggcacatttcattcaggcaaaccaacaa |
33409860 |
T |
|
| Q |
164 |
tcctacccaacctactttgataggact-caaattgtaactccaggaagtgaaataccaagttggatcaacaatcaaagtgtgggtgattcaatacaaata |
262 |
Q |
| |
|
|||||| | ||| | || ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||| ||| |
|
|
| T |
33409859 |
-----cccaacaaa--ttgtcggcgcttcaaattgtaactccaggaagtgaaataccaagttggatcaacaatcagagcgtgggtgcttcaatatcaatt |
33409767 |
T |
|
| Q |
263 |
gacgaatctcctattatgcatgacaataacaataatatcattggatttgtatgttgtgcagtatttaccatggcacc |
339 |
Q |
| |
|
|| ||||||||| |||| ||||||||||||||||||| ||||| |||||| |||||| | || || |||||||||| |
|
|
| T |
33409766 |
gatgaatctcctgttataaatgacaataacaataatattattggctttgtaagttgtgtattaatttccatggcacc |
33409690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 63 - 328
Target Start/End: Original strand, 31562838 - 31563109
Alignment:
| Q |
63 |
caggattggtcattttcaactgttcaaaattgg------gtgagagggaacgttgcaggagcatgacattttcatggatgatacaattcattcaggcaaa |
156 |
Q |
| |
|
|||||||||||||||| |||||| | ||||||| |||||||||| | |||||||||||||||||||||||||||| |||||||||| ||||| | |
|
|
| T |
31562838 |
caggattggtcatttttaactgtccgaaattggctgagagtgagagggagcattgcaggagcatgacattttcatggatggcacaattcattaaggcata |
31562937 |
T |
|
| Q |
157 |
cctgcaatcctacccaacctactttgataggactcaaattgtaactccaggaagtgaaataccaagttggatcaacaatcaaagtgtgggtgattcaata |
256 |
Q |
| |
|
| || |||||||| |||| || ||| | ||| ||||| |||||||||||||||||| | ||||||||||||||| || |||||||||||||| |
|
|
| T |
31562938 |
tccacactcctaccctgcctatttggatgagtttcatattgttgttccaggaagtgaaataccgaattggatcaacaatcatagcatgggtgattcaata |
31563037 |
T |
|
| Q |
257 |
caaatagacgaatctcctattatgcatgacaataacaataatatcattggatttgtatgttgtgcagtattt |
328 |
Q |
| |
|
| |||||| |||||| |||||||||||||| |||| |||||||||| ||||||||||||||||||||| |
|
|
| T |
31563038 |
ccaatagagttctctcctcctatgcatgacaatatcaatgatatcattggctttgtatgttgtgcagtattt |
31563109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 444 - 659
Target Start/End: Complemental strand, 33271447 - 33271233
Alignment:
| Q |
444 |
gtcttattacgaccaaatcaagtcacctatggataatctacttccctcgagattcctataatgaatttggaaaaatccattttgacatttttgaggggga |
543 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||| | ||||||||| |||||| || |||||| ||| ||| || | || | | ||| || |
|
|
| T |
33271447 |
gtcttattacgaccaaatcaagtcacctatggatgatcttcctccctcgagggtcctatgataaatttgaaaacatctgttgttacgatgtgttgggtga |
33271348 |
T |
|
| Q |
544 |
aggtttgggtatgaaggtgaagagttgtgggtatcgttgggtatgtaaacaagacctacaatagttcaacttaacaatgatgaatcacaaaaatatcctt |
643 |
Q |
| |
|
||| ||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||| ||||||| |||||||| |||||||| ||||| ||||| |
|
|
| T |
33271347 |
aggcttgggtatggaggtgaagagttgcgggtatcgttggatatgtaaacaagacctacaagagttcaatataacaatgctgaatcacgaaaat-tcctt |
33271249 |
T |
|
| Q |
644 |
agctccgaagtgtaag |
659 |
Q |
| |
|
||||| || |||||| |
|
|
| T |
33271248 |
ggctccaaaatgtaag |
33271233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 268 - 488
Target Start/End: Complemental strand, 33358716 - 33358496
Alignment:
| Q |
268 |
atctcctattatgcatgacaataacaataatatcattggatttgtatgttgtgcagtatttaccatggcaccacgtcgtaggcgggttccatcgtcgacc |
367 |
Q |
| |
|
||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||| |||| | | | || ||||| ||| | || |
|
|
| T |
33358716 |
atctcctattaggcatgacaataacaataatgtcattggttttgtatgttgtgcagtattttccatgacacctcagcatgggtattttccaccgtggtcc |
33358617 |
T |
|
| Q |
368 |
attatggaactagttttacctaagaattcctatatgaatttttggaaaataagtgttccggtaattctcgatggtggtcttattacgaccaaatcaagtc |
467 |
Q |
| |
|
|||||||||| |||| ||| ||||| ||| | ||| ||||||| |||||||| ||||||||| |||| |||||||||||| |||||||||||| |
|
|
| T |
33358616 |
cttatggaactgactttaactacagattccaatagtattttgaggaaaatgagtgttccagtaattctcaatggaggtcttattacgcccaaatcaagtc |
33358517 |
T |
|
| Q |
468 |
acctatggataatctacttcc |
488 |
Q |
| |
|
|||| |||||||||||||||| |
|
|
| T |
33358516 |
acctgtggataatctacttcc |
33358496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 58 - 264
Target Start/End: Complemental strand, 33271785 - 33271582
Alignment:
| Q |
58 |
gatttcaggattggtcattttcaactgttcaaaattgg------gtgagagggaacgttgcaggagcatgacattttcatggatgatacaattcattcag |
151 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| | |
|
|
| T |
33271785 |
gattacaggattggtcattttcaactgtccaaaattggctgactgtgagagggaacgttgcagtagcttgacattttcatggatgatacaattcattatg |
33271686 |
T |
|
| Q |
152 |
gcaaacctgcaatcctacccaacctactttg-ataggactcaaattgtaactccaggaagtgaaataccaagttggatcaacaatcaaagtgtgggtgat |
250 |
Q |
| |
|
||||||| |||||| || |||| || | ||| ||| |||||||||||||||||||||||||||||||||||||||| || |||||||| |
|
|
| T |
33271685 |
gcaaacccgcaatctta----------tttgaatgagtttcatattataactccaggaagtgaaataccaagttggatcaacaatcagagcatgggtgat |
33271596 |
T |
|
| Q |
251 |
tcaatacaaataga |
264 |
Q |
| |
|
|| |||| |||||| |
|
|
| T |
33271595 |
tcgataccaataga |
33271582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 426 - 654
Target Start/End: Original strand, 28870546 - 28870772
Alignment:
| Q |
426 |
cggtaattctcgatggtggtcttattacgaccaaatcaagtcacctatggataatctacttccctcgagattcctataatgaatttggaaaaatccattt |
525 |
Q |
| |
|
|||||||| ||||| | | |||||||||||||||||||||||||||||| || |||||||||| ||||| | |||| ||| | ||||| |||| | | |
|
|
| T |
28870546 |
cggtaattatcgatagagatcttattacgaccaaatcaagtcacctatgactagtctacttcccccgagagtactatgatgtttatggaactatccgtgt |
28870645 |
T |
|
| Q |
526 |
tgacatttttgagggggaaggtttgggtatgaaggtgaagagttgtgggtatcgttgggtatgtaaacaagacctacaatagttcaacttaacaatgatg |
625 |
Q |
| |
|
| || | ||| |||| | ||||| | ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
28870646 |
gaaaggttatatgggtgaagttgtgggttttgaggtgaagagttgcgggtatcgttgggtatgtaaacaagacctacaagagttcaacttaacaatgatg |
28870745 |
T |
|
| Q |
626 |
aatcacaaaaatatccttagctccgaagt |
654 |
Q |
| |
|
|| ||||||||| ||||| |||| ||||| |
|
|
| T |
28870746 |
aa-cacaaaaat-tccttggctcagaagt |
28870772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 551 - 692
Target Start/End: Complemental strand, 33262117 - 33261975
Alignment:
| Q |
551 |
ggtatgaaggtgaagagttgtgggtatcgttgggtatgtaaacaagacctacaatagttcaacttaacaatgatgaatcacaaaaatatccttagctccg |
650 |
Q |
| |
|
|||||| ||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||| ||| || |
|
|
| T |
33262117 |
ggtatggaggtgaagagttgcgggtatcattgggtatgtaaacaagacctacaagagttcaacttaacaatgatgaatcatgaaaa-atccttggcttcg |
33262019 |
T |
|
| Q |
651 |
aagtgtaaggtttgggta--tgaagatgaggcagaaccacaacc |
692 |
Q |
| |
|
|| |||||| ||| || | |||||||||| || |||||||||| |
|
|
| T |
33262018 |
aaatgtaagattttggcaattgaagatgagacacaaccacaacc |
33261975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 549 - 655
Target Start/End: Complemental strand, 33407882 - 33407777
Alignment:
| Q |
549 |
tgggtatgaaggtgaagagttgtgggtatcgttgggtatgtaaacaagacctacaatagttcaacttaacaatgatgaatcacaaaaatatccttagctc |
648 |
Q |
| |
|
|||||| |||||||||||| || |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| |||| |
|
|
| T |
33407882 |
tgggtacgaaggtgaagagctgcgggtatagttgggtatgtaaacaagacctacaaaagttcaacttaacaatgatgaatcacgaaaat-tccttggctc |
33407784 |
T |
|
| Q |
649 |
cgaagtg |
655 |
Q |
| |
|
|||||| |
|
|
| T |
33407783 |
agaagtg |
33407777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 452 - 609
Target Start/End: Original strand, 31563224 - 31563381
Alignment:
| Q |
452 |
acgaccaaatcaagtcacctatggataatctacttccctcgagattcctataatgaatttggaaaaatccattttgacatttttgagggggaaggtttgg |
551 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| || | |||||||| ||||||||||||||||||||||| || || || |
|
|
| T |
31563224 |
acgaccaaatcaagtcacctatggataatctacttccctcgagggtcacgtcatgaatttcgaaaaatccattttgacattttttcggctaaaatttcac |
31563323 |
T |
|
| Q |
552 |
gtatgaaggtgaagagttgtgggtatcgttgggtatgtaaacaagacctacaatagtt |
609 |
Q |
| |
|
||||| |||||||||||| || |||||||||||||||||||| ||||||||| |||| |
|
|
| T |
31563324 |
ctatgagggtgaagagttgcggatatcgttgggtatgtaaacatgacctacaagagtt |
31563381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 445 - 659
Target Start/End: Complemental strand, 33409590 - 33409377
Alignment:
| Q |
445 |
tcttattacgaccaaatcaagtcacctatggataatctacttccctcgagattcctataatgaatttggaaaaatccattttgacatttt-tgaggggga |
543 |
Q |
| |
|
||||||||| ||||||||||||||||||||| || |||||||||| ||||| |||||| ||| | ||||| ||| | || || || | |||| || |
|
|
| T |
33409590 |
tcttattacaaccaaatcaagtcacctatggctagtctacttcccccgagagtcctatgatgtttatggaactctccgtgc-gaaatgttatcagggtga |
33409492 |
T |
|
| Q |
544 |
aggtttgggtatgaaggtgaagagttgtgggtatcgttgggtatgtaaacaagacctacaatagttcaacttaacaatgatgaatcacaaaaatatcctt |
643 |
Q |
| |
|
|| | ||||| | ||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||| ||||| |
|
|
| T |
33409491 |
agttgtgggttttgaggtgaaaagttgcgggtatcgttgggtatgtaaacaagacctacaaaagttcaacttcacaatgatgaatcatgaaaat-tcctt |
33409393 |
T |
|
| Q |
644 |
agctccgaagtgtaag |
659 |
Q |
| |
|
|||| |||||||||| |
|
|
| T |
33409392 |
ggctcagaagtgtaag |
33409377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 33396932 - 33396851
Alignment:
| Q |
549 |
tgggtatgaaggtgaagagttgtgggtatcgttgggtatgtaaacaagacctacaatagttcaacttaacaatgatgaatca |
630 |
Q |
| |
|
|||||||| |||||||||| || ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
33396932 |
tgggtatggaggtgaagagctgcaggtatagttgggtatgtaaacaagacctacaaaagttcaacttaacaatgatgaatca |
33396851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 542 - 659
Target Start/End: Complemental strand, 33398581 - 33398465
Alignment:
| Q |
542 |
gaaggtttgggtatgaaggtgaagagttgtgggtatcgttgggtatgtaaacaagacctacaatagttcaacttaacaatgatgaatcacaaaaatatcc |
641 |
Q |
| |
|
|||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||| | |||| ||||| |||||||||||||| ||||| ||| |
|
|
| T |
33398581 |
gaaggtttgggttttgaggtgaagagttgcgggtatcgttgggtatgtaaacaagacctacgaaagttgaacttcacaatgatgaatcatgaaaat-tcc |
33398483 |
T |
|
| Q |
642 |
ttagctccgaagtgtaag |
659 |
Q |
| |
|
|| |||| ||||||||| |
|
|
| T |
33398482 |
tttgctcaaaagtgtaag |
33398465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 558 - 637
Target Start/End: Complemental strand, 33358423 - 33358345
Alignment:
| Q |
558 |
aggtgaagagttgtgggtatcgttgggtatgtaaacaagacctacaatagttcaacttaacaatgatgaatcacaaaaat |
637 |
Q |
| |
|
||||||||||||||| |||||||||||| | |||||||||||||||| |||||||||| ||||||||||||||| ||||| |
|
|
| T |
33358423 |
aggtgaagagttgtgagtatcgttgggttt-taaacaagacctacaagagttcaacttcacaatgatgaatcacgaaaat |
33358345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 98 - 229
Target Start/End: Complemental strand, 33358849 - 33358714
Alignment:
| Q |
98 |
gagagggaacgttgcaggagcatgacattttcatggatgatacaattcattca----ggcaaacctgcaatcctacccaacctactttgataggactcaa |
193 |
Q |
| |
|
||||||||||||||||| ||||||||| |||||||||||| |||||||||||| |||||||| | ||||||||| ||| ||| |||| | |||| |
|
|
| T |
33358849 |
gagagggaacgttgcagtagcatgacactttcatggatgaaacaattcattcattctggcaaacccaccatcctaccctgactattttcatagcattcaa |
33358750 |
T |
|
| Q |
194 |
attgtaactccaggaagtgaaataccaagttggatc |
229 |
Q |
| |
|
|| || ||||||||||||||||| | |||||||||| |
|
|
| T |
33358749 |
atagttactccaggaagtgaaatgctaagttggatc |
33358714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 444 - 720
Target Start/End: Complemental strand, 33057188 - 33056908
Alignment:
| Q |
444 |
gtcttattacgaccaaatcaagtcacctatggataatctacttccctcgag------------attcctataatgaatttggaaaaatccattttgacat |
531 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| |||||||| || |||| |||||| | |||||||||||||||| | || | | |
|
|
| T |
33057188 |
gtcttgttacgaccaaatcaagtcacctatggattatctacttaccccgagagtaccccgggtattcctgtcatgaatttggaaaaatagaattaaaatt |
33057089 |
T |
|
| Q |
532 |
ttttgagggggaaggtttgggtatgaaggtgaagagttgtgggtatcgttgggtatgtaaacaagacctacaatagttcaacttaacaatgatgaatcac |
631 |
Q |
| |
|
|||||||| ||||||||||| |||| ||||||| || ||||||||||||||||||||||| ||||| | ||||| || ||| ||||||||| |
|
|
| T |
33057088 |
ttttgaggtggaaggtttgg------aggtcgagagttgcggttatcgttgggtatgtaaacaagatatacaagaattcaattt---aatcatgaatcac |
33056998 |
T |
|
| Q |
632 |
aaaaatatccttagctccgaagtgtaaggtttgggta--tgaagatgaggcagaaccacaaccgcagccataaccacttcacagataagaa |
720 |
Q |
| |
|
|||||| |||||| |||| ||||| || ||| | | |||||||||| || ||||| ||||||| ||||||| |||||||||||||||| |
|
|
| T |
33056997 |
aaaaat-tccttaactccaaagtgcaaaattttgacaattgaagatgagacacaaccagaaccgcaaccataactacttcacagataagaa |
33056908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 33281234 - 33281153
Alignment:
| Q |
549 |
tgggtatgaaggtgaagagttgtgggtatcgttgggtatgtaaacaagacctacaatagttcaacttaacaatgatgaatca |
630 |
Q |
| |
|
|||||| | ||||||||||||| | | ||||||| |||||||||||||||||||| |||||| |||||||| |||||||| |
|
|
| T |
33281234 |
tgggtacggaggtgaagagttgcgtgcatcgttgaatatgtaaacaagacctacaagagttcagtttaacaataatgaatca |
33281153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 445 - 502
Target Start/End: Complemental strand, 33398708 - 33398651
Alignment:
| Q |
445 |
tcttattacgaccaaatcaagtcacctatggataatctacttccctcgagattcctat |
502 |
Q |
| |
|
|||| |||||||| |||||||||||||||||||| |||| |||| |||||||||||| |
|
|
| T |
33398708 |
tcttgttacgaccgaatcaagtcacctatggatagcctacatcccccgagattcctat |
33398651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 445 - 502
Target Start/End: Complemental strand, 33262232 - 33262175
Alignment:
| Q |
445 |
tcttattacgaccaaatcaagtcacctatggataatctacttccctcgagattcctat |
502 |
Q |
| |
|
||||||||||| |||||||||||||| ||| |||||||||| || ||||| |||||| |
|
|
| T |
33262232 |
tcttattacgatgaaatcaagtcacctgtggctaatctacttaccccgagagtcctat |
33262175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1408 (Bit Score: 140; Significance: 8e-73; HSPs: 3)
Name: scaffold1408
Description:
Target: scaffold1408; HSP #1
Raw Score: 140; E-Value: 8e-73
Query Start/End: Original strand, 64 - 339
Target Start/End: Complemental strand, 631 - 356
Alignment:
| Q |
64 |
aggattggtcattttcaactgttcaaaattgggtgagagggaacgttgcaggagcatgacattttcatggatgatacaattcattcaggcaaacctgcaa |
163 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||| |||| || ||||| |||||||||||||||| |||||||||||||||||||| ||| |
|
|
| T |
631 |
aggattggtcattttcaactgtccaaaattgggtgagagggaatgttgtagtagcataacattttcatggatgaaacaattcattcaggcaaaccaacaa |
532 |
T |
|
| Q |
164 |
tcctacccaacctactttgataggactcaaattgtaactccaggaagtgaaataccaagttggatcaacaatcaaagtgtgggtgattcaatacaaatag |
263 |
Q |
| |
|
|||||| | || || || | ||||||||| ||||||||||||||||||||||| |||||||||||||| || |||||| |||||||| ||||| |
|
|
| T |
531 |
tcctacggtccgtatttgtatgagcttcaaattgttactccaggaagtgaaataccaagctggatcaacaatcagagcatgggtggttcaatactaatag |
432 |
T |
|
| Q |
264 |
acgaatctcctattatgcatgacaataacaataatatcattggatttgtatgttgtgcagtatttaccatggcacc |
339 |
Q |
| |
|
||||||||||| |||| ||||||||||| |||||||||||||| ||||||| ||||||||||||| ||||||||| |
|
|
| T |
431 |
acgaatctcctgttatacatgacaataagaataatatcattggctttgtattttgtgcagtattttgcatggcacc |
356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1408; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 549 - 692
Target Start/End: Complemental strand, 146 - 2
Alignment:
| Q |
549 |
tgggtatgaaggtgaagagttgtgggtatcgttgggtatgtaaacaagacctacaatagttcaacttaacaatgatgaatcacaaaaatatccttagctc |
648 |
Q |
| |
|
|||||||| | |||||| |||| |||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||| |||| |||||| ||| |
|
|
| T |
146 |
tgggtatggatgtgaagtgttgcgggtatcgttgggtatgtaaacaaaacttacaagagttcaacttaacaatgatgaatcatgaaaa-atccttggctt |
48 |
T |
|
| Q |
649 |
cgaagtgtaaggtttgggta--tgaagatgaggcagaaccacaacc |
692 |
Q |
| |
|
|||| |||||| ||| || | |||||||||| || |||||||||| |
|
|
| T |
47 |
cgaaatgtaagattttggcaattgaagatgagacacaaccacaacc |
2 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1408; HSP #3
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 423 - 515
Target Start/End: Complemental strand, 278 - 186
Alignment:
| Q |
423 |
ttccggtaattctcgatggtggtcttattacgaccaaatcaagtcacctatggataatctacttccctcgagattcctataatgaatttggaa |
515 |
Q |
| |
|
|||||||||| ||||| | | ||||||| ||||||||||||||||||||||| || ||||||| || ||||| | |||| ||| ||||||| |
|
|
| T |
278 |
ttccggtaataatcgatagagatcttattccgaccaaatcaagtcacctatggctagtctactttccccgagagtactatgatgtttttggaa |
186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0428 (Bit Score: 140; Significance: 8e-73; HSPs: 4)
Name: scaffold0428
Description:
Target: scaffold0428; HSP #1
Raw Score: 140; E-Value: 8e-73
Query Start/End: Original strand, 64 - 339
Target Start/End: Complemental strand, 6377 - 6102
Alignment:
| Q |
64 |
aggattggtcattttcaactgttcaaaattgggtgagagggaacgttgcaggagcatgacattttcatggatgatacaattcattcaggcaaacctgcaa |
163 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||| |||| || ||||| |||||||||||||||| |||||||||||||||||||| ||| |
|
|
| T |
6377 |
aggattggtcattttcaactgtccaaaattgggtgagagggaatgttgtagtagcataacattttcatggatgaaacaattcattcaggcaaaccaacaa |
6278 |
T |
|
| Q |
164 |
tcctacccaacctactttgataggactcaaattgtaactccaggaagtgaaataccaagttggatcaacaatcaaagtgtgggtgattcaatacaaatag |
263 |
Q |
| |
|
|||||| | || || || | ||||||||| ||||||||||||||||||||||| |||||||||||||| || |||||| |||||||| ||||| |
|
|
| T |
6277 |
tcctacggtccgtatttgtatgagcttcaaattgttactccaggaagtgaaataccaagctggatcaacaatcagagcatgggtggttcaatactaatag |
6178 |
T |
|
| Q |
264 |
acgaatctcctattatgcatgacaataacaataatatcattggatttgtatgttgtgcagtatttaccatggcacc |
339 |
Q |
| |
|
||||||||||| |||| ||||||||||| |||||||||||||| ||||||| ||||||||||||| ||||||||| |
|
|
| T |
6177 |
acgaatctcctgttatacatgacaataagaataatatcattggctttgtattttgtgcagtattttgcatggcacc |
6102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0428; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 549 - 692
Target Start/End: Complemental strand, 5892 - 5748
Alignment:
| Q |
549 |
tgggtatgaaggtgaagagttgtgggtatcgttgggtatgtaaacaagacctacaatagttcaacttaacaatgatgaatcacaaaaatatccttagctc |
648 |
Q |
| |
|
|||||||| | |||||| |||| |||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||| |||| |||||| ||| |
|
|
| T |
5892 |
tgggtatggatgtgaagtgttgcgggtatcgttgggtatgtaaacaaaacttacaagagttcaacttaacaatgatgaatcatgaaaa-atccttggctt |
5794 |
T |
|
| Q |
649 |
cgaagtgtaaggtttgggta--tgaagatgaggcagaaccacaacc |
692 |
Q |
| |
|
|||| |||||| ||| || | |||||||||| || |||||||||| |
|
|
| T |
5793 |
cgaaatgtaagattttggcaattgaagatgagacacaaccacaacc |
5748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0428; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 13018 - 13099
Alignment:
| Q |
549 |
tgggtatgaaggtgaagagttgtgggtatcgttgggtatgtaaacaagacctacaatagttcaacttaacaatgatgaatca |
630 |
Q |
| |
|
|||||| | ||||||||||||| | | ||||||| |||||||||||||||||||| |||||| |||||||| |||||||| |
|
|
| T |
13018 |
tgggtacggaggtgaagagttgcgtgcatcgttgaatatgtaaacaagacctacaagagttcagtttaacaataatgaatca |
13099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0428; HSP #4
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 423 - 515
Target Start/End: Complemental strand, 6024 - 5932
Alignment:
| Q |
423 |
ttccggtaattctcgatggtggtcttattacgaccaaatcaagtcacctatggataatctacttccctcgagattcctataatgaatttggaa |
515 |
Q |
| |
|
|||||||||| ||||| | | ||||||| ||||||||||||||||||||||| || ||||||| || ||||| | |||| ||| ||||||| |
|
|
| T |
6024 |
ttccggtaataatcgatagagatcttattccgaccaaatcaagtcacctatggctagtctactttccccgagagtactatgatgtttttggaa |
5932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 113; Significance: 1e-56; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 419 - 636
Target Start/End: Original strand, 17441259 - 17441482
Alignment:
| Q |
419 |
agtgttccggtaattctcgatggtggtcttattacga------ccaaatcaagtcacctatggataatctacttccctcgagattcctataatgaatttg |
512 |
Q |
| |
|
|||||||||||||||||| |||| ||||| |||||| |||||||||||||| |||||||||||||||||| | || |||||| ||| |||| |
|
|
| T |
17441259 |
agtgttccggtaattctcaatggaagtcttgttacgataacaaccaaatcaagtcacatatggataatctacttccactgtgagtcctatcatgcatttc |
17441358 |
T |
|
| Q |
513 |
gaaaaatccattttgacatttttgagggggaaggtttgggtatgaaggtgaagagttgtgggtatcgttgggtatgtaaacaagacctacaatagttcaa |
612 |
Q |
| |
|
|| |||||| |||||| |||||||||||| ||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
17441359 |
gagaaatccgttttgaaatttttgaggggcaagctttgggtatggaggtgaagagttgcgggtatcgttgggtatgtaaacaagacctacaagagttcaa |
17441458 |
T |
|
| Q |
613 |
cttaacaatgatgaatcacaaaaa |
636 |
Q |
| |
|
||||||||||||||||||| |||| |
|
|
| T |
17441459 |
cttaacaatgatgaatcacgaaaa |
17441482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 110; E-Value: 7e-55
Query Start/End: Original strand, 63 - 384
Target Start/End: Original strand, 17440900 - 17441203
Alignment:
| Q |
63 |
caggattggtcattttcaactgttcaaaattgggtgagagggaacgttgcaggagcatgacattttcatggatgatacaattcattcaggcaaacctgca |
162 |
Q |
| |
|
|||||||| |||| ||||||||| |||||||||||||||||||| ||| ||| ||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
17440900 |
caggattgttcatcttcaactgtccaaaattgggtgagagggaatgttacagtagcatgacattttcatggatgatgcaattcattaaggcaa------- |
17440992 |
T |
|
| Q |
163 |
atcctacccaacctactttgataggactcaaattgtaactccaggaagtgaaataccaagttggatcaacaatcaaagtgtgggtgattcaatacaaata |
262 |
Q |
| |
|
|||| ||| || |||||| ||| ||||| | ||||||||| |||||||||||||||||||||||| | || ||||||||||||||| |||| |
|
|
| T |
17440993 |
-----accctttctatttgaataggattcatattgttagtccaggaagcgaaataccaagttggatcaacaataagagcgtgggtgattcaataagaata |
17441087 |
T |
|
| Q |
263 |
gacgaatctcctattatgcatgacaataacaataatatcattggatttgtatgttgtgcagtatttaccatggcaccacgtcgtaggcgggttccatcgt |
362 |
Q |
| |
|
||| |||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||| |||||||||| | |||| || || ||||||||| |
|
|
| T |
17441088 |
gaccaatctcctattaagcatg------acaataatatcattggttttgtatgttgtgcagtattttccatggcacctcatcgtgggaggtttccatcgt |
17441181 |
T |
|
| Q |
363 |
cgaccattatggaactagtttt |
384 |
Q |
| |
|
|| || ||||||||| ||||| |
|
|
| T |
17441182 |
cggcccatatggaactggtttt |
17441203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 581 - 655
Target Start/End: Original strand, 17446954 - 17447027
Alignment:
| Q |
581 |
tgggtatgtaaacaagacctacaatagttcaacttaacaatgatgaatcacaaaaatatccttagctccgaagtg |
655 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||| ||||| || ||||| ||||| |||| |||||| |
|
|
| T |
17446954 |
tgggtatgtaaacaagacctacaagagttcaacttaacaatgttgaataacgaaaat-tccttggctcagaagtg |
17447027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 105; Significance: 6e-52; HSPs: 12)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 64 - 328
Target Start/End: Original strand, 31479029 - 31479293
Alignment:
| Q |
64 |
aggattggtcattttcaactgttcaaaattgggtgagagggaacgttgcaggagcatgacattttcatggatgatacaattcattcaggcaaacctgcaa |
163 |
Q |
| |
|
||||||| |||||||||||||| | ||||||||||| | ||||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
31479029 |
aggattgttcattttcaactgtcctaaattgggtgaaacggaacgttggagtagcatgacattttcatggatgatacaattcattcaggcaaaccgacaa |
31479128 |
T |
|
| Q |
164 |
tcctacccaacctactttgataggactcaaattgtaactccaggaagtgaaataccaagttggatcaacaatcaaagtgtgggtgattcaatacaaatag |
263 |
Q |
| |
|
| || || || || ||||||| ||||||||| |||||||| |||||||| ||||||||| |||||||||| || |||| ||| ||||| ||||| |
|
|
| T |
31479129 |
ttctcccatgactcctctgatagggttcaaattgttactccaggtagtgaaatgccaagttggttcaacaatcagagcaagggtaatttaatacgaatag |
31479228 |
T |
|
| Q |
264 |
acgaatctcctattatgcatgacaataacaataatatcattggatttgtatgttgtgcagtattt |
328 |
Q |
| |
|
| ||||| |||||||| |||||||||||||||||| |||| | ||||||||||| ||||||| |
|
|
| T |
31479229 |
attcttctccgattatgcacgacaataacaataatatcgttggctgtgtatgttgtgtagtattt |
31479293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 63 - 328
Target Start/End: Original strand, 31472567 - 31472835
Alignment:
| Q |
63 |
caggattggtcattttcaactgttcaaaattgggtgagagggaac---gttgcaggagcatgacattttcatggatgatacaattcattcaggcaaacct |
159 |
Q |
| |
|
|||||||| |||||||||||||| | || |||||||||||||||| |||||| | ||||||||||||||||||||||||| ||||||||||||| | |
|
|
| T |
31472567 |
caggattgctcattttcaactgtcctaatttgggtgagagggaacattgttgcactaacatgacattttcatggatgatacaactcattcaggcaaatcc |
31472666 |
T |
|
| Q |
160 |
gcaatcctacccaacctactttgataggactcaaattgtaactccaggaagtgaaataccaagttggatcaacaatcaaagtgtgggtgattcaatacaa |
259 |
Q |
| |
|
||||||| ||| || | ||||| | ||| ||||| ||||||||||||||||||||||||||| |||||||||| | ||||||||| |||| | |
|
|
| T |
31472667 |
acaatccttccctgactgttatgatataattcagattgttactccaggaagtgaaataccaagttggttcaacaatcagaacaagggtgattcgatacga |
31472766 |
T |
|
| Q |
260 |
atagacgaatctcctattatgcatgacaataacaataatatcattggatttgtatgttgtgcagtattt |
328 |
Q |
| |
|
||||| |||||| |||||||||||||||||||||||||||||||| | | ||||||||| ||||||| |
|
|
| T |
31472767 |
ttagactcatctcccattatgcatgacaataacaataatatcattggttgtatatgttgtgtagtattt |
31472835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 194 - 339
Target Start/End: Original strand, 31499206 - 31499351
Alignment:
| Q |
194 |
attgtaactccaggaagtgaaataccaagttggatcaacaatcaaagtgtgggtgattcaatacaaatagacgaatctcctattatgcatgacaataaca |
293 |
Q |
| |
|
||||| |||||||||||||||||| |||||||| | || ||||| || |||||||||||||| ||||||| |||||| ||||| ||||||||||||| |
|
|
| T |
31499206 |
attgttactccaggaagtgaaatatcaagttggtttaagaatcagagcaagggtgattcaatacgaatagactcatctcccattatccatgacaataaca |
31499305 |
T |
|
| Q |
294 |
ataatatcattggatttgtatgttgtgcagtatttaccatggcacc |
339 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| | |||||||| |
|
|
| T |
31499306 |
ataatatcattggctttgtatgttgtgcagtattttctatggcacc |
31499351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 64 - 155
Target Start/End: Complemental strand, 31157213 - 31157122
Alignment:
| Q |
64 |
aggattggtcattttcaactgttcaaaattgggtgagagggaacgttgcaggagcatgacattttcatggatgatacaattcattcaggcaa |
155 |
Q |
| |
|
|||||||||||||||||||||| | |||||||||||||| ||| ||||| |||||| |||||||||||||||||||||| |||||||||| |
|
|
| T |
31157213 |
aggattggtcattttcaactgtcctaaattgggtgagagtgaagattgcaatagcatggcattttcatggatgatacaattgattcaggcaa |
31157122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 71 - 237
Target Start/End: Complemental strand, 31148268 - 31148111
Alignment:
| Q |
71 |
gtcattttcaactgttcaaaattgggtgagagggaacgttgcaggagcatgacattttcatggatgatacaattcattcaggcaaacctgcaatcctacc |
170 |
Q |
| |
|
||||||||||||||| | |||||||||||||||||| |||| | ||||||| ||||||||||||||||||| |||||| ||| |||| ||||||| |
|
|
| T |
31148268 |
gtcattttcaactgtcctaaattgggtgagagggaatgttggaatagcatgatattttcatggatgatacaactcattcgggcgaacccacaatcct--- |
31148172 |
T |
|
| Q |
171 |
caacctactttgataggactcaaattgtaactccaggaagtgaaataccaagttggatcaacaatca |
237 |
Q |
| |
|
|| | |||| || ||||||||| ||||| ||||||||||||||||||||| |||||||||| |
|
|
| T |
31148171 |
ca------tctgatgtgattcaaattgttactccgggaagtgaaataccaagttggttcaacaatca |
31148111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 74 - 346
Target Start/End: Original strand, 31504224 - 31504490
Alignment:
| Q |
74 |
attttcaactgttcaaaattgggtgagagggaacgttgcaggagcatgacattttcatggatgatacaattcattcaggcaaacctgcaatcct-accca |
172 |
Q |
| |
|
|||||||||||| | ||||||| |||||||||| | | || || |||||||||||||||||||||||||||||| ||||||||| ||||||| | || |
|
|
| T |
31504224 |
attttcaactgtcctaaattggatgagagggaatgctacattagaatgacattttcatggatgatacaattcattaaggcaaacccacaatcctcatccg |
31504323 |
T |
|
| Q |
173 |
acctactttgataggactcaaattgtaactccaggaagtgaaataccaagttggatcaacaatcaaagtgtgggtgattcaatacaaatagacgaatctc |
272 |
Q |
| |
|
| ||||||| || || || ||| || ||||| |||| |||||||||||||||| |||||||| | || |||| || ||||||||||| || |
|
|
| T |
31504324 |
a-ctactttcatgtgattc-aatcgttactcctggaaatgaaataccaagttggttcaacaattagagcaagggtcgctccatacaaataga-----ctg |
31504416 |
T |
|
| Q |
273 |
ctattatgcatgacaataacaataatatcattggatttgtatgttgtgcagtatttaccatggcaccacgtcgt |
346 |
Q |
| |
|
| ||||||||||| ||| |||||||||||||| | ||||||||||| ||||||| |||||| ||| |||||| |
|
|
| T |
31504417 |
gtcttatgcatgactttaaaaataatatcattggttgtgtatgttgtgtagtattttccatggaacctcgtcgt |
31504490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 560 - 637
Target Start/End: Original strand, 31479558 - 31479635
Alignment:
| Q |
560 |
gtgaagagttgtgggtatcgttgggtatgtaaacaagacctacaatagttcaacttaacaatgatgaatcacaaaaat |
637 |
Q |
| |
|
||||||| ||||||||| |||||||| | |||||| || |||||| | ||||||||||||| ||||||||||| |||| |
|
|
| T |
31479558 |
gtgaagaattgtgggtaccgttgggtttataaacaggatctacaagaattcaacttaacaaagatgaatcacagaaat |
31479635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 327
Target Start/End: Complemental strand, 31157082 - 31156947
Alignment:
| Q |
192 |
aaattgtaactccaggaagtgaaataccaagttggatcaacaatcaaagtgtgggtgattcaatacaaatagacgaatctcctattatgcatgacaataa |
291 |
Q |
| |
|
||||||| | ||| |||||||||||||||| |||| |||||||||| || | ||||||||||||| ||| ||| ||||| |||||| | ||||| | |
|
|
| T |
31157082 |
aaattgttattcctggaagtgaaataccaatttggttcaacaatcagagcgagggtgattcaataagaatggacctatctcagattatggacaacaatga |
31156983 |
T |
|
| Q |
292 |
caataatatcattggatttgtatgttgtgcagtatt |
327 |
Q |
| |
|
|||| || ||||||| ||| |||||||||||||| |
|
|
| T |
31156982 |
caatgatttcattggcattgcttgttgtgcagtatt |
31156947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 542 - 637
Target Start/End: Original strand, 31473099 - 31473195
Alignment:
| Q |
542 |
gaaggtttgggtatgaaggtgaagagttgtgggtatcgttgggtatgtaaacaagacctacaatagttcaa-cttaacaatgatgaatcacaaaaat |
637 |
Q |
| |
|
|||| ||||||||| ||||||||| ||||||||| | |||||||| | || | || |||||| ||| ||| |||||||| |||||||||||||||| |
|
|
| T |
31473099 |
gaagatttgggtatagaggtgaagaattgtgggtaccattgggtatatgaagaggatctacaagagtccaaacttaacaaagatgaatcacaaaaat |
31473195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 558 - 625
Target Start/End: Complemental strand, 31525858 - 31525791
Alignment:
| Q |
558 |
aggtgaagagttgtgggtatcgttgggtatgtaaacaagacctacaatagttcaacttaacaatgatg |
625 |
Q |
| |
|
||||||||| |||||| ||||||||||||| |||||| || |||||| | ||||||| ||||||||| |
|
|
| T |
31525858 |
aggtgaagaattgtggttatcgttgggtatataaacatgatctacaacatctcaactttacaatgatg |
31525791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 581 - 647
Target Start/End: Original strand, 31499587 - 31499652
Alignment:
| Q |
581 |
tgggtatgtaaacaagacctacaatagttcaacttaacaatgatgaatcacaaaaatatccttagct |
647 |
Q |
| |
|
||||||| ||| || || |||||| |||| |||||||||||||||||||||| ||||| |||||||| |
|
|
| T |
31499587 |
tgggtatataagcatgatctacaagagttgaacttaacaatgatgaatcacagaaata-ccttagct |
31499652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 560 - 617
Target Start/End: Original strand, 31485298 - 31485355
Alignment:
| Q |
560 |
gtgaagagttgtgggtatcgttgggtatgtaaacaagacctacaatagttcaacttaa |
617 |
Q |
| |
|
||||||||||| |||||||||||||||| ||| || || || ||| |||||||||||| |
|
|
| T |
31485298 |
gtgaagagttgcgggtatcgttgggtatttaagcaggatctgcaagagttcaacttaa |
31485355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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