View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4821_low_6 (Length: 316)
Name: NF4821_low_6
Description: NF4821
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4821_low_6 |
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Alignment Details
Target: chr2 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 17 - 270
Target Start/End: Original strand, 40218154 - 40218407
Alignment:
| Q |
17 |
atttgtttcatatgattgtcaattatagaaaacaaattatctagaggattagaatgccttaaaataggaagaagaggacatgtgtaaaattttcatgcat |
116 |
Q |
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| T |
40218154 |
atttgtttcatatgattgtcaattatagaaaacaaattatctagaggattagaatgccttaaaataggaacaagaggacatatgtaaaattttcatgcat |
40218253 |
T |
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| Q |
117 |
atttctatttgtttatgttctcgtatcttttcctatggtaacacctttttatcaaattaaatgacacgaaataacttcccccacaaaacaaagtcaaatc |
216 |
Q |
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| T |
40218254 |
atttctatttgtttatgttctcgtatcttttcctatggtaacacctttttatcaaattaaatgacacgaaataacttcccccacaaaacaaagtcaaatc |
40218353 |
T |
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| Q |
217 |
atatccaataaaaatgatagtattaaaaaaccaaactacattatttttcaaatt |
270 |
Q |
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| T |
40218354 |
atatccaataaaaatgatagtattaaaaaaccaaactacattatttttcaaatt |
40218407 |
T |
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