View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4821_low_8 (Length: 275)

Name: NF4821_low_8
Description: NF4821
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4821_low_8
NF4821_low_8
[»] chr2 (79 HSPs)
chr2 (19-126)||(38962752-38962859)
chr2 (23-127)||(41220628-41220732)
chr2 (19-127)||(3643896-3644004)
chr2 (19-125)||(19976818-19976924)
chr2 (53-127)||(25540413-25540487)
chr2 (29-126)||(10026626-10026723)
chr2 (23-124)||(22593128-22593228)
chr2 (53-126)||(38005425-38005498)
chr2 (19-127)||(6358160-6358268)
chr2 (19-127)||(7747263-7747371)
chr2 (23-127)||(10823053-10823157)
chr2 (19-127)||(42770660-42770768)
chr2 (48-127)||(20116621-20116700)
chr2 (23-128)||(331494-331599)
chr2 (27-127)||(39201517-39201617)
chr2 (19-103)||(41187838-41187922)
chr2 (52-115)||(13104846-13104909)
chr2 (18-127)||(20612543-20612654)
chr2 (19-126)||(34356195-34356302)
chr2 (19-126)||(35946728-35946834)
chr2 (37-127)||(34722687-34722777)
chr2 (23-127)||(7787049-7787153)
chr2 (23-127)||(12455303-12455407)
chr2 (19-127)||(12864213-12864321)
chr2 (54-126)||(28525465-28525537)
chr2 (19-102)||(13026445-13026528)
chr2 (24-127)||(27725934-27726037)
chr2 (16-127)||(44139470-44139581)
chr2 (19-113)||(2550857-2550951)
chr2 (54-112)||(9360772-9360830)
chr2 (53-127)||(11069901-11069975)
chr2 (53-127)||(16325618-16325692)
chr2 (23-125)||(29422208-29422310)
chr2 (53-127)||(37560196-37560270)
chr2 (53-127)||(44945616-44945690)
chr2 (19-127)||(2784922-2785029)
chr2 (47-127)||(10669609-10669689)
chr2 (19-127)||(14169618-14169726)
chr2 (19-127)||(16034926-16035034)
chr2 (53-113)||(24179591-24179651)
chr2 (29-113)||(29653626-29653709)
chr2 (67-126)||(10046487-10046546)
chr2 (53-128)||(29421305-29421380)
chr2 (53-128)||(41031914-41031989)
chr2 (20-87)||(45263716-45263783)
chr2 (53-127)||(8410154-8410228)
chr2 (54-127)||(5035312-5035385)
chr2 (172-229)||(12110974-12111031)
chr2 (42-127)||(26805308-26805393)
chr2 (19-87)||(21286433-21286501)
chr2 (25-121)||(25549723-25549819)
chr2 (24-127)||(18902539-18902642)
chr2 (53-127)||(3811700-3811774)
chr2 (19-117)||(3848933-3849031)
chr2 (37-127)||(31596441-31596531)
chr2 (23-113)||(39806908-39806998)
chr2 (19-126)||(44548734-44548849)
chr2 (28-113)||(16813188-16813272)
chr2 (28-113)||(16852467-16852551)
chr2 (53-90)||(33005774-33005811)
chr2 (54-127)||(44773287-44773360)
chr2 (177-241)||(3602415-3602479)
chr2 (16-121)||(14853380-14853487)
chr2 (23-103)||(15079476-15079556)
chr2 (20-112)||(28616403-28616495)
chr2 (52-103)||(21180347-21180398)
chr2 (174-241)||(23267316-23267383)
chr2 (65-128)||(33634447-33634510)
chr2 (76-127)||(35443874-35443925)
chr2 (53-127)||(34346296-34346370)
chr2 (65-117)||(36480457-36480506)
chr2 (26-88)||(40968963-40969025)
chr2 (26-103)||(18649059-18649136)
chr2 (70-127)||(21641990-21642047)
chr2 (16-87)||(2149243-2149315)
chr2 (23-87)||(15234110-15234174)
chr2 (177-241)||(31224769-31224833)
chr2 (37-125)||(34130313-34130400)
chr2 (177-241)||(39141425-39141489)
[»] chr1 (83 HSPs)
chr1 (19-129)||(14254276-14254386)
chr1 (19-127)||(10336506-10336614)
chr1 (19-127)||(16263535-16263643)
chr1 (29-121)||(33498855-33498947)
chr1 (27-127)||(32142856-32142956)
chr1 (19-113)||(10422778-10422872)
chr1 (47-127)||(32889-32969)
chr1 (19-127)||(5855512-5855620)
chr1 (23-127)||(43959831-43959935)
chr1 (26-127)||(45361892-45361993)
chr1 (19-127)||(10172981-10173089)
chr1 (19-127)||(41663866-41663974)
chr1 (54-120)||(38791627-38791693)
chr1 (61-127)||(42710148-42710214)
chr1 (37-127)||(50371844-50371934)
chr1 (53-126)||(17642015-17642088)
chr1 (19-127)||(5504021-5504129)
chr1 (51-127)||(46929748-46929824)
chr1 (19-127)||(49078104-49078212)
chr1 (52-127)||(44969687-44969762)
chr1 (53-127)||(8764015-8764089)
chr1 (53-127)||(26325836-26325910)
chr1 (55-128)||(33418124-33418197)
chr1 (53-125)||(12036756-12036828)
chr1 (19-127)||(17092487-17092595)
chr1 (174-241)||(25061330-25061397)
chr1 (19-102)||(48798105-48798188)
chr1 (61-127)||(4581692-4581758)
chr1 (53-127)||(30927737-30927811)
chr1 (53-127)||(35211182-35211256)
chr1 (47-128)||(10507716-10507797)
chr1 (16-125)||(11397901-11398009)
chr1 (54-107)||(17988690-17988743)
chr1 (19-127)||(2567266-2567374)
chr1 (19-127)||(34697325-34697433)
chr1 (55-127)||(37339846-37339918)
chr1 (27-123)||(45726447-45726543)
chr1 (24-127)||(9659189-9659291)
chr1 (16-127)||(13262070-13262181)
chr1 (53-127)||(32150932-32151006)
chr1 (42-103)||(12744557-12744618)
chr1 (42-103)||(12755547-12755608)
chr1 (54-127)||(14357780-14357853)
chr1 (23-128)||(16956460-16956565)
chr1 (25-90)||(17358518-17358583)
chr1 (54-127)||(19195391-19195459)
chr1 (23-112)||(26258690-26258778)
chr1 (19-127)||(18649362-18649470)
chr1 (23-103)||(18915861-18915941)
chr1 (19-127)||(26660128-26660235)
chr1 (26-109)||(35908754-35908838)
chr1 (19-127)||(50503371-50503479)
chr1 (68-127)||(6899597-6899656)
chr1 (19-102)||(33004050-33004133)
chr1 (53-103)||(21849239-21849289)
chr1 (29-127)||(31576557-31576655)
chr1 (65-110)||(13265974-13266019)
chr1 (176-241)||(29441288-29441353)
chr1 (16-113)||(31152703-31152800)
chr1 (19-128)||(40288486-40288595)
chr1 (19-107)||(2980961-2981049)
chr1 (54-102)||(28324615-28324663)
chr1 (19-79)||(34334353-34334413)
chr1 (17-113)||(48761164-48761260)
chr1 (177-212)||(5167395-5167430)
chr1 (174-241)||(7826309-7826376)
chr1 (54-109)||(31734313-31734368)
chr1 (53-104)||(47312932-47312983)
chr1 (53-127)||(5143164-5143237)
chr1 (174-228)||(7765239-7765293)
chr1 (25-87)||(15465961-15466023)
chr1 (176-226)||(34571082-34571132)
chr1 (53-87)||(42744802-42744836)
chr1 (53-87)||(45536732-45536766)
chr1 (53-127)||(50094928-50095002)
chr1 (176-229)||(42041-42094)
chr1 (60-117)||(18708560-18708617)
chr1 (57-126)||(34719804-34719873)
chr1 (176-229)||(40352506-40352559)
chr1 (61-126)||(41696609-41696674)
chr1 (182-226)||(213172-213216)
chr1 (182-230)||(646252-646300)
chr1 (57-117)||(50952261-50952321)
[»] chr4 (92 HSPs)
chr4 (23-125)||(20532420-20532522)
chr4 (19-127)||(29895781-29895889)
chr4 (23-112)||(42722601-42722690)
chr4 (16-125)||(49260676-49260785)
chr4 (19-127)||(38075427-38075535)
chr4 (23-127)||(53599058-53599162)
chr4 (176-252)||(54683442-54683518)
chr4 (24-127)||(16645117-16645220)
chr4 (19-109)||(1446820-1446910)
chr4 (37-127)||(4738630-4738720)
chr4 (53-127)||(7246655-7246729)
chr4 (53-127)||(17080071-17080145)
chr4 (53-127)||(40780870-40780944)
chr4 (19-125)||(41162893-41162999)
chr4 (19-127)||(8889016-8889124)
chr4 (19-127)||(33647715-33647823)
chr4 (23-127)||(36145224-36145328)
chr4 (25-127)||(2559307-2559409)
chr4 (53-127)||(52950110-52950184)
chr4 (62-127)||(14597909-14597974)
chr4 (19-127)||(38166021-38166129)
chr4 (47-127)||(43458635-43458715)
chr4 (171-226)||(3652741-3652796)
chr4 (19-126)||(5472858-5472965)
chr4 (29-108)||(20354641-20354720)
chr4 (16-127)||(40272340-40272451)
chr4 (23-127)||(6032652-6032753)
chr4 (53-127)||(16450328-16450402)
chr4 (25-127)||(26479958-26480060)
chr4 (53-127)||(30317261-30317335)
chr4 (53-126)||(3507298-3507371)
chr4 (26-87)||(3574495-3574556)
chr4 (19-128)||(20421768-20421876)
chr4 (54-127)||(24166479-24166552)
chr4 (23-128)||(47078456-47078561)
chr4 (19-127)||(3159478-3159586)
chr4 (28-124)||(6779214-6779310)
chr4 (53-127)||(46108719-46108793)
chr4 (53-127)||(48015082-48015156)
chr4 (42-128)||(48317283-48317369)
chr4 (54-127)||(10541045-10541117)
chr4 (53-109)||(295560-295616)
chr4 (19-127)||(20128303-20128411)
chr4 (19-127)||(21429295-21429403)
chr4 (23-127)||(55921032-55921136)
chr4 (28-127)||(13073541-13073640)
chr4 (19-113)||(27248422-27248514)
chr4 (53-128)||(36262775-36262850)
chr4 (19-102)||(37382539-37382622)
chr4 (53-112)||(38168285-38168343)
chr4 (50-128)||(15839943-15840021)
chr4 (61-127)||(31588722-31588788)
chr4 (23-109)||(43468345-43468431)
chr4 (52-125)||(53354559-53354632)
chr4 (173-241)||(4649882-4649950)
chr4 (54-126)||(7741954-7742026)
chr4 (61-109)||(8064825-8064873)
chr4 (42-126)||(14859308-14859392)
chr4 (19-127)||(15829693-15829801)
chr4 (19-127)||(24850636-24850743)
chr4 (175-230)||(36150665-36150720)
chr4 (16-126)||(4736588-4736698)
chr4 (172-229)||(5025605-5025662)
chr4 (53-127)||(1940786-1940857)
chr4 (24-68)||(7000523-7000567)
chr4 (27-127)||(12703554-12703654)
chr4 (47-127)||(48656241-48656321)
chr4 (62-125)||(14567276-14567339)
chr4 (29-128)||(24478992-24479091)
chr4 (54-125)||(29588765-29588836)
chr4 (19-127)||(33109316-33109426)
chr4 (24-127)||(45721085-45721188)
chr4 (52-127)||(50485970-50486045)
chr4 (172-227)||(54487187-54487242)
chr4 (52-126)||(9548738-9548812)
chr4 (180-230)||(16492988-16493038)
chr4 (53-127)||(18531547-18531621)
chr4 (179-229)||(22699804-22699854)
chr4 (15-109)||(42722406-42722499)
chr4 (179-229)||(46958085-46958135)
chr4 (57-127)||(47682391-47682461)
chr4 (54-127)||(49952154-49952228)
chr4 (78-127)||(13552155-13552204)
chr4 (62-127)||(54946286-54946351)
chr4 (173-241)||(13167590-13167658)
chr4 (174-230)||(20191656-20191711)
chr4 (79-127)||(25406572-25406620)
chr4 (63-127)||(37194848-37194912)
chr4 (53-109)||(41339422-41339478)
chr4 (62-126)||(43310089-43310153)
chr4 (52-116)||(48352529-48352593)
chr4 (176-212)||(53158833-53158869)
[»] chr6 (44 HSPs)
chr6 (19-127)||(21898641-21898749)
chr6 (19-126)||(3587955-3588062)
chr6 (19-127)||(6606106-6606214)
chr6 (54-134)||(8888910-8888990)
chr6 (20-127)||(8938705-8938812)
chr6 (19-128)||(2271311-2271418)
chr6 (19-127)||(3601077-3601185)
chr6 (23-127)||(5253232-5253336)
chr6 (19-127)||(13036013-13036121)
chr6 (16-127)||(8932651-8932762)
chr6 (16-127)||(8944117-8944228)
chr6 (26-113)||(29333162-29333248)
chr6 (23-126)||(29444775-29444878)
chr6 (25-128)||(34954627-34954730)
chr6 (53-127)||(9633634-9633708)
chr6 (23-127)||(8611983-8612087)
chr6 (19-113)||(12606423-12606517)
chr6 (19-103)||(14107391-14107475)
chr6 (16-127)||(30788862-30788971)
chr6 (53-127)||(19089525-19089599)
chr6 (37-126)||(5029828-5029917)
chr6 (53-125)||(17114908-17114980)
chr6 (26-125)||(9179747-9179846)
chr6 (174-241)||(15151459-15151526)
chr6 (62-127)||(14783429-14783494)
chr6 (19-87)||(10311518-10311586)
chr6 (56-127)||(31129207-31129278)
chr6 (33-127)||(30410452-30410546)
chr6 (53-127)||(32157176-32157250)
chr6 (176-241)||(5584005-5584070)
chr6 (74-127)||(8149806-8149859)
chr6 (54-127)||(12635842-12635915)
chr6 (53-127)||(13584455-13584533)
chr6 (173-229)||(3605705-3605761)
chr6 (57-113)||(9366447-9366502)
chr6 (19-127)||(13468926-13469034)
chr6 (53-125)||(24671877-24671949)
chr6 (46-113)||(13627267-13627334)
chr6 (29-88)||(33859367-33859426)
chr6 (53-103)||(13391313-13391363)
chr6 (94-139)||(32048509-32048555)
chr6 (54-123)||(11142631-11142700)
chr6 (96-128)||(21872973-21873005)
chr6 (19-127)||(33940004-33940112)
[»] chr3 (77 HSPs)
chr3 (19-127)||(53649716-53649824)
chr3 (54-127)||(47219168-47219241)
chr3 (19-127)||(29127908-29128016)
chr3 (19-127)||(45877443-45877551)
chr3 (20-127)||(49198341-49198448)
chr3 (20-127)||(51060291-51060398)
chr3 (25-127)||(54261221-54261323)
chr3 (53-126)||(48342043-48342116)
chr3 (19-103)||(6462401-6462485)
chr3 (19-113)||(3755559-3755653)
chr3 (18-128)||(22909772-22909881)
chr3 (174-252)||(37698344-37698422)
chr3 (53-127)||(47471854-47471928)
chr3 (23-124)||(52364813-52364914)
chr3 (23-127)||(3136704-3136807)
chr3 (25-125)||(8164548-8164648)
chr3 (19-127)||(29135902-29136010)
chr3 (24-127)||(8362571-8362674)
chr3 (19-126)||(49082813-49082920)
chr3 (16-126)||(30767258-30767368)
chr3 (25-127)||(34662329-34662431)
chr3 (53-127)||(35923633-35923707)
chr3 (53-127)||(47749115-47749189)
chr3 (22-127)||(13893918-13894023)
chr3 (53-126)||(33251685-33251758)
chr3 (23-127)||(10040550-10040653)
chr3 (23-127)||(15320179-15320283)
chr3 (19-127)||(25294949-25295057)
chr3 (19-127)||(54237437-54237545)
chr3 (25-128)||(2029276-2029379)
chr3 (30-113)||(26043812-26043895)
chr3 (16-127)||(29762165-29762276)
chr3 (53-127)||(3507543-3507617)
chr3 (53-103)||(10855407-10855457)
chr3 (23-109)||(15795522-15795607)
chr3 (53-127)||(35315979-35316053)
chr3 (42-127)||(19146973-19147058)
chr3 (54-127)||(28572221-28572294)
chr3 (53-126)||(30045844-30045917)
chr3 (53-126)||(41630523-41630596)
chr3 (66-127)||(49021213-49021274)
chr3 (176-241)||(52813295-52813360)
chr3 (23-127)||(7328837-7328940)
chr3 (19-103)||(42412808-42412892)
chr3 (56-127)||(23511593-23511664)
chr3 (16-103)||(26207835-26207922)
chr3 (53-108)||(39849094-39849149)
chr3 (19-126)||(49543508-49543615)
chr3 (54-135)||(4638178-4638260)
chr3 (53-127)||(26361977-26362051)
chr3 (70-127)||(44064584-44064641)
chr3 (53-126)||(45402362-45402435)
chr3 (54-127)||(50405613-50405686)
chr3 (19-128)||(51682963-51683072)
chr3 (53-120)||(3763073-3763140)
chr3 (54-125)||(24146340-24146411)
chr3 (48-127)||(40660337-40660416)
chr3 (54-113)||(43330756-43330815)
chr3 (53-116)||(45450468-45450531)
chr3 (43-113)||(7648753-7648823)
chr3 (23-113)||(31072871-31072961)
chr3 (26-128)||(41219588-41219690)
chr3 (47-113)||(47303513-47303579)
chr3 (53-127)||(55069689-55069763)
chr3 (174-227)||(21023171-21023224)
chr3 (52-113)||(32873573-32873634)
chr3 (53-113)||(928623-928683)
chr3 (54-126)||(37319900-37319972)
chr3 (172-212)||(51285720-51285760)
chr3 (54-112)||(2668085-2668143)
chr3 (28-90)||(11687156-11687218)
chr3 (37-127)||(24506658-24506747)
chr3 (61-127)||(33688982-33689048)
chr3 (180-229)||(10852688-10852737)
chr3 (53-102)||(13367447-13367496)
chr3 (19-103)||(28242267-28242351)
chr3 (96-128)||(32522045-32522077)
[»] chr5 (77 HSPs)
chr5 (16-127)||(20525825-20525936)
chr5 (28-126)||(9805003-9805101)
chr5 (19-113)||(12081898-12081992)
chr5 (19-113)||(14588640-14588734)
chr5 (53-127)||(42291514-42291588)
chr5 (176-252)||(3747544-3747620)
chr5 (19-127)||(40117405-40117513)
chr5 (27-127)||(42086325-42086425)
chr5 (16-127)||(15034062-15034173)
chr5 (25-128)||(38897727-38897829)
chr5 (19-127)||(1538421-1538529)
chr5 (23-127)||(5731929-5732033)
chr5 (23-127)||(9812866-9812970)
chr5 (23-127)||(12766125-12766229)
chr5 (23-127)||(37263235-37263338)
chr5 (27-126)||(23383655-23383754)
chr5 (23-121)||(18262633-18262731)
chr5 (19-112)||(9168277-9168369)
chr5 (19-128)||(19572714-19572823)
chr5 (23-127)||(12705008-12705112)
chr5 (52-127)||(3653923-3653998)
chr5 (27-113)||(7866579-7866665)
chr5 (53-127)||(11845810-11845884)
chr5 (53-127)||(39099788-39099862)
chr5 (55-127)||(14728109-14728181)
chr5 (46-126)||(20255386-20255466)
chr5 (19-111)||(30349569-30349661)
chr5 (20-123)||(42861231-42861334)
chr5 (53-120)||(7308380-7308447)
chr5 (53-128)||(21375375-21375450)
chr5 (53-127)||(20590023-20590097)
chr5 (54-127)||(8513544-8513617)
chr5 (52-125)||(24875368-24875441)
chr5 (20-125)||(35245017-35245122)
chr5 (53-113)||(14974347-14974407)
chr5 (28-128)||(18294492-18294591)
chr5 (19-127)||(24653821-24653928)
chr5 (43-127)||(43399142-43399226)
chr5 (16-127)||(14152037-14152148)
chr5 (53-112)||(20682641-20682700)
chr5 (23-90)||(28857122-28857189)
chr5 (23-126)||(41163470-41163572)
chr5 (38-88)||(20705572-20705622)
chr5 (27-127)||(21487615-21487712)
chr5 (24-102)||(25417217-25417295)
chr5 (171-241)||(35847838-35847908)
chr5 (19-125)||(41800967-41801073)
chr5 (26-127)||(13664257-13664358)
chr5 (25-117)||(23247370-23247462)
chr5 (19-127)||(18136285-18136397)
chr5 (29-84)||(19839327-19839382)
chr5 (53-112)||(24463910-24463969)
chr5 (16-78)||(1898988-1899050)
chr5 (53-127)||(2485220-2485294)
chr5 (19-77)||(16755051-16755109)
chr5 (73-127)||(27648434-27648488)
chr5 (29-127)||(31890090-31890188)
chr5 (42-87)||(25467423-25467468)
chr5 (53-126)||(32874811-32874884)
chr5 (24-117)||(38369695-38369787)
chr5 (19-119)||(7336610-7336710)
chr5 (19-127)||(18045629-18045736)
chr5 (53-128)||(4016263-4016338)
chr5 (56-115)||(27484188-27484247)
chr5 (29-103)||(25452926-25452999)
chr5 (53-87)||(26077165-26077199)
chr5 (19-101)||(28862815-28862897)
chr5 (53-103)||(30995145-30995195)
chr5 (60-114)||(35813020-35813074)
chr5 (54-127)||(20692958-20693031)
chr5 (61-90)||(22295248-22295277)
chr5 (54-115)||(28615274-28615335)
chr5 (54-115)||(39728412-39728473)
chr5 (28-77)||(40060295-40060344)
chr5 (62-126)||(6764467-6764531)
chr5 (27-87)||(21149732-21149792)
chr5 (19-103)||(35561851-35561935)
[»] chr8 (55 HSPs)
chr8 (19-112)||(6100465-6100558)
chr8 (19-127)||(8141095-8141203)
chr8 (23-127)||(10927603-10927707)
chr8 (15-127)||(18373999-18374111)
chr8 (176-252)||(24297548-24297624)
chr8 (177-252)||(3619026-3619101)
chr8 (53-127)||(4479305-4479379)
chr8 (54-127)||(24938571-24938644)
chr8 (19-127)||(1012986-1013094)
chr8 (178-242)||(8130062-8130126)
chr8 (23-126)||(24837239-24837342)
chr8 (25-127)||(43027304-43027406)
chr8 (19-108)||(2467146-2467235)
chr8 (27-127)||(36662406-36662505)
chr8 (16-127)||(26570914-26571025)
chr8 (16-127)||(45521159-45521269)
chr8 (53-119)||(583839-583905)
chr8 (25-127)||(9860004-9860106)
chr8 (19-112)||(3418537-3418630)
chr8 (23-127)||(2964073-2964177)
chr8 (24-112)||(33401823-33401911)
chr8 (23-127)||(44893287-44893391)
chr8 (19-113)||(10535427-10535520)
chr8 (53-127)||(15884565-15884639)
chr8 (52-126)||(23895594-23895668)
chr8 (53-127)||(43032928-43033002)
chr8 (174-241)||(3465394-3465461)
chr8 (53-127)||(3567931-3568005)
chr8 (23-109)||(6042818-6042904)
chr8 (23-125)||(14846573-14846674)
chr8 (19-87)||(14666120-14666188)
chr8 (24-127)||(68107-68210)
chr8 (53-127)||(11298276-11298350)
chr8 (29-111)||(18091404-18091485)
chr8 (27-113)||(22958771-22958857)
chr8 (53-90)||(8586985-8587022)
chr8 (26-87)||(20240570-20240631)
chr8 (26-87)||(20252436-20252497)
chr8 (57-113)||(3692864-3692920)
chr8 (15-87)||(13359011-13359083)
chr8 (19-127)||(16893930-16894036)
chr8 (37-121)||(35496270-35496354)
chr8 (23-87)||(38922463-38922527)
chr8 (56-127)||(11785945-11786016)
chr8 (16-127)||(17981431-17981542)
chr8 (52-103)||(33935768-33935819)
chr8 (176-230)||(2071539-2071593)
chr8 (53-127)||(13357965-13358039)
chr8 (174-228)||(39219807-39219861)
chr8 (180-229)||(36779490-36779539)
chr8 (19-127)||(6940551-6940658)
chr8 (19-87)||(13085517-13085585)
chr8 (53-101)||(21174167-21174215)
chr8 (173-241)||(22552693-22552761)
chr8 (19-83)||(34613831-34613895)
[»] scaffold0376 (1 HSPs)
scaffold0376 (23-127)||(12666-12770)
[»] scaffold0170 (1 HSPs)
scaffold0170 (16-128)||(9834-9946)
[»] chr7 (62 HSPs)
chr7 (19-127)||(4195211-4195319)
chr7 (19-127)||(10047885-10047993)
chr7 (19-127)||(17748391-17748499)
chr7 (23-127)||(38578876-38578980)
chr7 (19-127)||(48804675-48804783)
chr7 (53-127)||(48551883-48551957)
chr7 (23-127)||(13095854-13095958)
chr7 (19-127)||(43861981-43862089)
chr7 (24-127)||(22973964-22974067)
chr7 (26-121)||(30827291-30827386)
chr7 (53-127)||(39420863-39420937)
chr7 (62-127)||(3353459-3353524)
chr7 (23-127)||(1605937-1606041)
chr7 (19-127)||(1797452-1797560)
chr7 (15-127)||(5039427-5039539)
chr7 (23-127)||(18785665-18785769)
chr7 (19-127)||(28396169-28396277)
chr7 (183-251)||(46285291-46285359)
chr7 (53-127)||(42032122-42032196)
chr7 (16-109)||(34659215-34659308)
chr7 (54-127)||(45960012-45960085)
chr7 (23-127)||(5069824-5069928)
chr7 (26-126)||(14535290-14535390)
chr7 (23-127)||(22993376-22993480)
chr7 (27-127)||(29151940-29152040)
chr7 (57-113)||(41945503-41945559)
chr7 (23-127)||(43925508-43925612)
chr7 (53-112)||(39474966-39475025)
chr7 (23-125)||(47341872-47341974)
chr7 (26-127)||(23658178-23658279)
chr7 (19-128)||(43346787-43346896)
chr7 (53-117)||(19914722-19914786)
chr7 (25-109)||(36619281-36619365)
chr7 (53-127)||(27028305-27028379)
chr7 (19-112)||(27875112-27875205)
chr7 (53-117)||(4228773-4228837)
chr7 (23-103)||(16802119-16802199)
chr7 (27-87)||(46414675-46414735)
chr7 (53-117)||(49142688-49142752)
chr7 (19-90)||(365132-365203)
chr7 (20-87)||(21190829-21190896)
chr7 (53-128)||(45697198-45697273)
chr7 (53-127)||(8734695-8734769)
chr7 (53-127)||(21530774-21530848)
chr7 (25-127)||(48244365-48244467)
chr7 (68-109)||(24983446-24983487)
chr7 (54-127)||(26423297-26423369)
chr7 (53-126)||(28744188-28744261)
chr7 (54-127)||(42210271-42210344)
chr7 (26-87)||(44336892-44336953)
chr7 (25-117)||(22573811-22573902)
chr7 (23-127)||(37514917-37515021)
chr7 (28-127)||(41267933-41268033)
chr7 (53-112)||(29805464-29805523)
chr7 (23-113)||(14650313-14650403)
chr7 (61-103)||(38988934-38988976)
chr7 (176-226)||(43186539-43186589)
chr7 (175-212)||(597826-597863)
chr7 (78-127)||(9685778-9685827)
chr7 (74-127)||(32768984-32769037)
chr7 (172-229)||(35772381-35772438)
chr7 (23-127)||(10317755-10317858)
[»] scaffold0291 (1 HSPs)
scaffold0291 (23-127)||(6851-6955)
[»] scaffold0016 (1 HSPs)
scaffold0016 (27-126)||(8711-8810)
[»] scaffold0005 (2 HSPs)
scaffold0005 (62-127)||(219404-219469)
scaffold0005 (62-125)||(250036-250099)
[»] scaffold0384 (1 HSPs)
scaffold0384 (55-127)||(6000-6072)
[»] scaffold0002 (3 HSPs)
scaffold0002 (19-127)||(319414-319522)
scaffold0002 (23-127)||(566-670)
scaffold0002 (19-71)||(412091-412143)
[»] scaffold0086 (1 HSPs)
scaffold0086 (25-128)||(26181-26284)
[»] scaffold0316 (1 HSPs)
scaffold0316 (25-127)||(1623-1725)
[»] scaffold0209 (1 HSPs)
scaffold0209 (53-119)||(12599-12665)
[»] scaffold0010 (2 HSPs)
scaffold0010 (53-124)||(155723-155794)
scaffold0010 (52-112)||(25808-25868)
[»] scaffold0009 (1 HSPs)
scaffold0009 (52-127)||(42841-42916)
[»] scaffold0004 (2 HSPs)
scaffold0004 (61-127)||(7844-7910)
scaffold0004 (19-125)||(94991-95096)
[»] scaffold0001 (1 HSPs)
scaffold0001 (53-127)||(65161-65235)
[»] scaffold0041 (1 HSPs)
scaffold0041 (53-127)||(25111-25185)
[»] scaffold0172 (1 HSPs)
scaffold0172 (176-229)||(15214-15267)
[»] scaffold0006 (1 HSPs)
scaffold0006 (53-127)||(68543-68614)
[»] scaffold0116 (1 HSPs)
scaffold0116 (60-127)||(17423-17490)
[»] scaffold0079 (1 HSPs)
scaffold0079 (53-84)||(8200-8231)
[»] scaffold0155 (1 HSPs)
scaffold0155 (53-103)||(19281-19331)
[»] scaffold0029 (1 HSPs)
scaffold0029 (53-127)||(41070-41144)
[»] scaffold0050 (1 HSPs)
scaffold0050 (26-103)||(72631-72708)
[»] scaffold0011 (1 HSPs)
scaffold0011 (46-127)||(224336-224417)


Alignment Details
Target: chr2 (Bit Score: 80; Significance: 1e-37; HSPs: 79)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 38962752 - 38962859
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||     
T  38962752 gtatccggggaataccgggttcgattttcaggaggaacaacgcttggccagtgcgcatgcctctacgcatgaaccggattagtcgtccacctttggtggg 38962851  T
Q  119 tcggaaac 126  Q
    || |||||    
T  38962852 tcagaaac 38962859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 41220628 - 41220732
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    ||||||||||||| |||| |||  ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||  ||| ||||    
T  41220628 ccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccgaattagtcgttcacctttagtgggtcgg 41220727  T
Q  123 aaacc 127  Q
    |||||    
T  41220728 aaacc 41220732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 3644004 - 3643896
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||||||||||||||| |||  ||||  | || |||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||| |||     
T  3644004 gtatccggggaataccgggtttgatttctacgaggaacaacgcttggccagtgcgcatgcctctacgcatgagctggattagtcgtccacctttggtggg 3643905  T
Q  119 tcggaaacc 127  Q
     ||||||||    
T  3643904 ccggaaacc 3643896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 19976924 - 19976818
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||||||||||||||| |||| |||||||||  ||| |||| |||| ||||||||||| |||||||||| |  ||||||||||| |||||||||||| |    
T  19976924 gtatccggggaataccgggttcgattttcagggggaataacgtttggtcagtgcgcatgtctctacgcataagtcgaattagtcgcccacctttgatgaa 19976825  T
Q  119 tcggaaa 125  Q
    |||||||    
T  19976824 tcggaaa 19976818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 25540487 - 25540413
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||| ||| |||||||||    
T  25540487 gaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtgggtcggaaacc 25540413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 126
Target Start/End: Complemental strand, 10026723 - 10026626
Alignment:
Q  29 aataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaac 126  Q
    ||||||| |||| ||| |||||  |||||||| ||||||||||||||||||||||||||||| ||| |||||||| ||||||||| ||| ||||||||    
T  10026723 aataccgggttcgattctcagggggaacaacgtttggccagtgcgcatgcctctacgcatgagccggattagtcgaccacctttggtgggtcggaaac 10026626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 124
Target Start/End: Original strand, 22593128 - 22593228
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    ||||||||||| |||||| |||  ||||  |||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||| ||||    
T  22593128 ccggggaatactgagttcgattcccagggggaacaacg-ttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcgg 22593226  T
Q  123 aa 124  Q
    ||    
T  22593227 aa 22593228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 38005425 - 38005498
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaac 126  Q
    |||||||||||||||||||||||||||||||| ||||| ||| |||||||| ||||||||| ||||||||||||    
T  38005425 gaacaacgcttggccagtgcgcatgcctctacacatgagccggattagtcgcccacctttggtggatcggaaac 38005498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 6358268 - 6358160
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||||||||||||||   ||| |||| ||||  ||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||| ||| |||     
T  6358268 gtatccggggaataccagattcgatttccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtggg 6358169  T
Q  119 tcggaaacc 127  Q
    ||| |||||    
T  6358168 tcgaaaacc 6358160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 7747263 - 7747371
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||||||||||||||| |||| |||   |||| |||||||| |||||||||| |||||||||||||||||| ||| ||||||||| |||||||  |||     
T  7747263 gtatccggggaataccgggttcgattcctaggaggaacaacgtttggccagtgtgcatgcctctacgcatgagccggattagtcgttcacctttagtggg 7747362  T
Q  119 tcggaaacc 127  Q
    |||||||||    
T  7747363 tcggaaacc 7747371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 10823053 - 10823157
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    ||||||||||||| |||  |||  ||||| ||||||||||||||||||||||||||||||||||| || ||| |||||||| ||||||||  ||| ||||    
T  10823053 ccggggaataccgggtttgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccaccttttgtgggtcgg 10823152  T
Q  123 aaacc 127  Q
    |||||    
T  10823153 aaacc 10823157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 42770768 - 42770660
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||||| | ||||||| |||||||| |||||  |||||||||||||||||||||||||||||| |||| || ||| |||| ||||||||||||| |||     
T  42770768 gtatccgagaaataccgggttcaattctcagggggaacaacgcttggccagtgcgcatgcctcttcgcacgagccggattaatcgtccacctttggtggg 42770669  T
Q  119 tcggaaacc 127  Q
    ||| |||||    
T  42770668 tcgaaaacc 42770660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 48 - 127
Target Start/End: Complemental strand, 20116700 - 20116621
Alignment:
Q  48 aggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||| ||||||||| |||||| ||||||||||||||||||||| ||| ||||| |||||||||||||||| |||||||||    
T  20116700 aggaggaacaacgcatggccaatgcgcatgcctctacgcatgagccggattagccgtccacctttgatgggtcggaaacc 20116621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 128
Target Start/End: Original strand, 331494 - 331599
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    ||||||||||||| |||| |||  ||||  ||||||| |||||||||||||||||| ||||||||||| ||| |||||||| ||||||||| ||| | ||    
T  331494 ccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcttctacgcatgagccggattagtcgcccacctttggtgggttgg 331593  T
Q  123 aaacca 128  Q
    ||||||    
T  331594 aaacca 331599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 127
Target Start/End: Complemental strand, 39201617 - 39201517
Alignment:
Q  27 ggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaac 126  Q
    |||||||||| ||| ||| |||||  |||||| | |||||||||| |||||||||||||||||| ||| ||||||||| |||||||| ||| ||||||||    
T  39201617 ggaataccgaattcgattctcagggggaacaatgtttggccagtgtgcatgcctctacgcatgagccggattagtcgttcacctttggtgggtcggaaac 39201518  T
Q  127 c 127  Q
    |    
T  39201517 c 39201517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 41187838 - 41187922
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcg 103  Q
    ||||||| |||||||||| ||||||| | ||||| ||||||||||| |||||||||||||||||||||||||  || ||||||||    
T  41187838 gtatccgaggaataccgaattcaattcttaggaaaaacaacgcttgaccagtgcgcatgcctctacgcatgagacggattagtcg 41187922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 115
Target Start/End: Complemental strand, 13104909 - 13104846
Alignment:
Q  52 agaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgat 115  Q
    ||||||||||||||||||||||||||||||||||||||| |  ||||||||||| |||||||||    
T  13104909 agaacaacgcttggccagtgcgcatgcctctacgcatgagctaaattagtcgtctacctttgat 13104846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 20612654 - 20612543
Alignment:
Q  18 tgtatccggggaataccgagttcaattttcaggaag-aacaacgcttggccagtgcgcatgcctctacgcatgaacc-gaattagtcgtccacctttgat 115  Q
    ||||| |||||||||||| |||| ||| |||||| | |||||| ||||||||||||||||||||||| |||||| || | |||||||||||||| ||| |    
T  20612654 tgtattcggggaataccgggttcgattctcaggagggaacaacacttggccagtgcgcatgcctctatgcatgagccgggattagtcgtccaccattggt 20612555  T
Q  116 ggatcggaaacc 127  Q
    || |||||||||    
T  20612554 gggtcggaaacc 20612543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 34356195 - 34356302
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||| ||||||||||| |||| |||| ||||  ||||||| ||||| ||||||||||||||||| |||||| ||| |||| |||| |||| |||||||     
T  34356195 gtatctggggaataccgggttcgatttccagggggaacaacacttggtcagtgcgcatgcctctatgcatgagccggattaatcgtgcaccattgatggg 34356294  T
Q  119 tcggaaac 126  Q
    ||||||||    
T  34356295 tcggaaac 34356302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 35946728 - 35946834
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    |||||||||||||||||||||| |||   |||  |||||||||||||||| || ||||||||||||||| || ||| |||||||||||||| ||| |||     
T  35946728 gtatccggggaataccgagttcgattcctaggg-gaacaacgcttggccattgtgcatgcctctacgcacgagccggattagtcgtccaccattggtggg 35946826  T
Q  119 tcggaaac 126  Q
    ||||||||    
T  35946827 tcggaaac 35946834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 37 - 127
Target Start/End: Original strand, 34722687 - 34722777
Alignment:
Q  37 gttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||| ||| ||||| |||||||||||||| |||||| |||| ||||||||| || ||| |||||||| |||||||||||||||| ||||||    
T  34722687 gttcgattctcagggagaacaacgcttggtcagtgcacatgtctctacgcacgagccggattagtcgcccacctttgatggatcagaaacc 34722777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 7787049 - 7787153
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    ||||||||||||| |||| |||| ||||  ||||||  |||||||||| |||||||||||||||| || ||| |||||||| ||| ||||| |||||||     
T  7787049 ccggggaataccgggttcgatttccagggggaacaatacttggccagtacgcatgcctctacgcacgagccggattagtcgcccatctttggtggatcga 7787148  T
Q  123 aaacc 127  Q
    |||||    
T  7787149 aaacc 7787153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 12455303 - 12455407
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    ||||||||||||| |||| |||| ||||   |||||||||| ||||||||||||||||||||||| || ||| ||||||||  |||| ||| ||| ||||    
T  12455303 ccggggaataccgggttcgatttccaggggaaacaacgcttagccagtgcgcatgcctctacgcacgagccggattagtcgctcaccattggtgggtcgg 12455402  T
Q  123 aaacc 127  Q
    |||||    
T  12455403 aaacc 12455407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 12864213 - 12864321
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    |||| ||||||||||||  ||| |||| ||||  ||||||| ||||| |||||||||||||||| ||||||| ||  |||||||||||||| ||| |||     
T  12864213 gtattcggggaataccggattcgatttccagggggaacaacacttggtcagtgcgcatgcctctgcgcatgagccagattagtcgtccaccattggtggg 12864312  T
Q  119 tcggaaacc 127  Q
    |||||||||    
T  12864313 tcggaaacc 12864321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 28525537 - 28525465
Alignment:
Q  54 aacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaac 126  Q
    |||||| ||||||||||||||||||||||||||| || ||| ||||||| ||||||||| |||| ||||||||    
T  28525537 aacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcatccacctttaatgggtcggaaac 28525465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 13026528 - 13026445
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtc 102  Q
    |||||| ||||||| || |||| ||| |||||| |||||| | ||||||||||||||||||||||||||||| ||| |||||||    
T  13026528 gtatccagggaatatcgggttcgattatcaggaggaacaatgattggccagtgcgcatgcctctacgcatgagccggattagtc 13026445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 27725934 - 27726037
Alignment:
Q  24 cggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgga 123  Q
    ||||||||| ||||||  ||| |||||| |||||| ||||||||||||||||||||||||||||  | ||| |||||||| |||||  || ||| |||||    
T  27725934 cggggaatatcgagtttgattctcaggaggaacaatgcttggccagtgcgcatgcctctacgcactagccggattagtcgcccaccaatggtgggtcgga 27726033  T
Q  124 aacc 127  Q
    ||||    
T  27726034 aacc 27726037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 44139470 - 44139581
Alignment:
Q  16 gatgtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgat 115  Q
    |||| ||| ||||||||||| |||| |||  ||||  |||||||||||||||||||||| |||||||||||| || ||| |||||||| |||||  || |    
T  44139470 gatgcatctggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcgtgcctctacgcacgagccggattagtcgcccaccaatggt 44139569  T
Q  116 ggatcggaaacc 127  Q
    || |||||||||    
T  44139570 gggtcggaaacc 44139581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 2550857 - 2550951
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttg 113  Q
    |||||||||||||| || |||| |||  ||||| ||||||| ||| ||||||||||||| |||||||||||| ||| |||||||| |||| ||||    
T  2550857 gtatccggggaatatcgggttcgattcccaggaggaacaacacttagccagtgcgcatgtctctacgcatgagccggattagtcgcccacttttg 2550951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 112
Target Start/End: Complemental strand, 9360830 - 9360772
Alignment:
Q  54 aacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccaccttt 112  Q
    ||||||| |||||||||||||||||||||||||| || |||||||||||| ||||||||    
T  9360830 aacaacgtttggccagtgcgcatgcctctacgcacgagccgaattagtcgcccaccttt 9360772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 11069901 - 11069975
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||| ||||||||||||||| |||||||||| || | |||||||||||||||| ||| ||| |||||||||    
T  11069901 gaacaacgtttggccagtgcgcatacctctacgcacgagctgaattagtcgtccaccgttggtgggtcggaaacc 11069975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 16325618 - 16325692
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||| ||||||||||| |||||||||||||||||| ||  |||||||||||||| ||| ||| |||||||||    
T  16325618 gaacaacacttggccagtgtgcatgcctctacgcatgagccagattagtcgtccaccattggtgggtcggaaacc 16325692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 29422208 - 29422310
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    ||||||||||| | |||| |||| |||   ||||||| |||||||| || |||| ||| |||||| || ||| |||||||||||||||||||||||||||    
T  29422208 ccggggaatactgggttcgatttccagagggaacaacacttggccaatgagcatacctttacgcacgagccggattagtcgtccacctttgatggatcgg 29422307  T
Q  123 aaa 125  Q
    |||    
T  29422308 aaa 29422310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 37560196 - 37560270
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||| |||| ||||||||||||||||||||| || ||| |||| ||||||||||||||||| ||| |||||    
T  37560196 gaacaacgtttggtcagtgcgcatgcctctacgcacgagccggattaatcgtccacctttgatgggtcgaaaacc 37560270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 44945616 - 44945690
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||||||||  |||||||||||||||||||| || ||| |||||||| ||||||||  |||||||||||||    
T  44945616 gaacaacgcttggatagtgcgcatgcctctacgcacgagccggattagtcgcccacctttagtggatcggaaacc 44945690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 2784922 - 2785029
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||||| |||||||||||||| ||||||||| | |||||   |||| ||||||||||||||||||||||||  |  |||||||||||| | ||||||      
T  2784922 gtatccgaggaataccgagttcgattttcaggga-aacaagatttggtcagtgcgcatgcctctacgcatgagtcagattagtcgtccatcattgatgag 2785020  T
Q  119 tcggaaacc 127  Q
    |||||||||    
T  2785021 tcggaaacc 2785029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 10669609 - 10669689
Alignment:
Q  47 caggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||| |||||||||||||||||||||||||| ||||||||| ||  || |||| |||| |||||||| ||| |||||||||    
T  10669609 cagggagaacaacgcttggccagtgcgcatgtctctacgcacgagtcggattaatcgttcacctttggtgggtcggaaacc 10669689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 14169726 - 14169618
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    |||| ||||||||| || |||| ||| || ||  ||||||| |||| |||||||||||| |||||||||||| ||| |||||||||| ||| ||| |||     
T  14169726 gtattcggggaatatcgggttcgattctccgggggaacaacacttgaccagtgcgcatgtctctacgcatgagccggattagtcgtctaccattggtggg 14169627  T
Q  119 tcggaaacc 127  Q
    |||||||||    
T  14169626 tcggaaacc 14169618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 16034926 - 16035034
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||||| ||||||||| |||| |||||||||  |||||||||||| |||||| |||||||| |||| | || ||| ||||||||  |||| ||||||      
T  16034926 gtatccgaggaataccgggttcgattttcaggcggaacaacgcttgaccagtgtgcatgcctatacgtacgagccggattagtcgctcaccattgatgag 16035025  T
Q  119 tcggaaacc 127  Q
    |||||||||    
T  16035026 tcggaaacc 16035034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 24179591 - 24179651
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttg 113  Q
    |||||||| ||||||||||| ||||||||||||||||| ||| |||||||||||| |||||    
T  24179591 gaacaacgtttggccagtgcacatgcctctacgcatgagccggattagtcgtccatctttg 24179651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 113
Target Start/End: Original strand, 29653626 - 29653709
Alignment:
Q  29 aataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttg 113  Q
    |||||||  ||| |||| |||| | |||||||||||| ||||||||||||||||||||| || |||||||||||| |||||||||    
T  29653626 aataccggattcgatttccagggaaaacaacgcttgggcagtgcgcatgcctctacgcacgagccgaattagtcg-ccacctttg 29653709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 126
Target Start/End: Complemental strand, 10046546 - 10046487
Alignment:
Q  67 cagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaac 126  Q
    |||||||||||||||||||||||| ||| |||||||| ||||||||| ||| ||||||||    
T  10046546 cagtgcgcatgcctctacgcatgagccggattagtcgaccacctttggtgggtcggaaac 10046487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 128
Target Start/End: Original strand, 29421305 - 29421380
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacca 128  Q
    ||||||||||||| ||||| ||||||||||||||||||  |||| |||||||| || |||| | ||||||||||||    
T  29421305 gaacaacgcttgggcagtgagcatgcctctacgcatgagtcgaagtagtcgtctacatttggtagatcggaaacca 29421380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 128
Target Start/End: Complemental strand, 41031989 - 41031914
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacca 128  Q
    ||||||| ||||||||||| ||||||||||||||| || ||| |||||||  ||||||||| ||| ||||||||||    
T  41031989 gaacaacacttggccagtgtgcatgcctctacgcacgagccggattagtcacccacctttggtgggtcggaaacca 41031914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 45263783 - 45263716
Alignment:
Q  20 tatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgca 87  Q
    |||||||||||||||| |||| |||  |||   |||||||||||||||||||||||||||||||||||    
T  45263783 tatccggggaataccgggttcgattcccagagggaacaacgcttggccagtgcgcatgcctctacgca 45263716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 8410154 - 8410228
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||| ||||||||||||||||||||||||||| || ||| |||||||| |||| ||||  || |||||||||    
T  8410154 gaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacttttggggggtcggaaacc 8410228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 5035312 - 5035385
Alignment:
Q  54 aacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||| ||||| |||||||||||| ||||||||| |||||| |||| || ||||||||| |||| |||||||||    
T  5035312 aacaatgcttgaccagtgcgcatgtctctacgcacgaaccggattaatcatccacctttaatgggtcggaaacc 5035385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 229
Target Start/End: Complemental strand, 12111031 - 12110974
Alignment:
Q  172 attaagtgtgtgtttggttctgcggtgataaaaattgatttcgatataattgattttg 229  Q
    ||||||||||||||||||| ||||||||  ||||||||||| |||| |||||||||||    
T  12111031 attaagtgtgtgtttggttgtgcggtgacgaaaattgattttgatagaattgattttg 12110974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 127
Target Start/End: Original strand, 26805308 - 26805393
Alignment:
Q  42 attttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||||||  ||| ||| ||||||||||| |||||||||||||||||  || |||||||| ||||||||| ||| ||| |||||    
T  26805308 attttcaggagaaacgacgtttggccagtgcacatgcctctacgcatgagtcggattagtcgcccacctttggtggctcgaaaacc 26805393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 21286433 - 21286501
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgca 87  Q
    ||||||||||||||||| |||| |||  ||||   ||||||||||| ||||||||||||||||||||||    
T  21286433 gtatccggggaataccgggttcgattcccaggcgaaacaacgcttgaccagtgcgcatgcctctacgca 21286501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 25549723 - 25549819
Alignment:
Q  25 ggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcg 121  Q
    ||||||||| | |||| ||| | ||| | ||||||  ||||| ||||| |||||||||||||| || ||| |||||||||||| |||||||||||||    
T  25549723 ggggaatactgggttcgattcttagggaaaacaacatttggctagtgcacatgcctctacgcacgagccggattagtcgtccatctttgatggatcg 25549819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 18902642 - 18902539
Alignment:
Q  24 cggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgga 123  Q
    |||||||||||| |||| |||  || |  |||||||||||| ||||||||| || ||||||||| || ||  |||||||| ||||||||| ||| |||||    
T  18902642 cggggaataccgggttcgattcccacggggaacaacgcttgaccagtgcgcgtgtctctacgcacgagccagattagtcgcccacctttggtgggtcgga 18902543  T
Q  124 aacc 127  Q
    ||||    
T  18902542 aacc 18902539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 3811774 - 3811700
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||| ||||| || ||||||||||||||||||||| ||| |||| ||| ||||||||| ||| || ||||||    
T  3811774 gaacaacacttggtcaatgcgcatgcctctacgcatgagccggattactcgcccacctttggtgggtcagaaacc 3811700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 3849031 - 3848933
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgg 117  Q
    ||||| || |||||||| |||| ||| |||||   ||||||| |||||||| ||||||| ||||||||| ||  || ||||||||| ||||||||||||    
T  3849031 gtatctggagaataccgggttcgattatcaggggaaacaacgtttggccagggcgcatgtctctacgcacgagtcggattagtcgttcacctttgatgg 3848933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 127
Target Start/End: Complemental strand, 31596531 - 31596441
Alignment:
Q  37 gttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||| |||||||||  |||||| | ||||||||||| ||| | ||||||||||| | |||||| ||||| |||||||||| || |||||||    
T  31596531 gttctattttcagggggaacaatgtttggccagtgcacatacttctacgcatgagctgaattaatcgtctacctttgatgaattggaaacc 31596441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 113
Target Start/End: Complemental strand, 39806998 - 39806908
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttg 113  Q
    ||||||||||||| |||| |||  || ||  ||||||| ||||||||||||||||||||||| || ||  || ||||||| ||||||||||    
T  39806998 ccggggaataccgggttcgattcccaagagaaacaacgtttggccagtgcgcatgcctctacacacgagtcggattagtcatccacctttg 39806908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 44548849 - 44548734
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgc--------atgaaccgaattagtcgtccacct 110  Q
    |||| ||||||||| | ||||||||| || | |||||||| ||||  |||||||| ||||||||||||        |||| ||  |||||||||||||||    
T  44548849 gtattcggggaatatcaagttcaattctcggtaagaacaatgcttaaccagtgcgtatgcctctacgcatgaggccatgagccagattagtcgtccacct 44548750  T
Q  111 ttgatggatcggaaac 126  Q
    ||||||||||||||||    
T  44548749 ttgatggatcggaaac 44548734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 113
Target Start/End: Complemental strand, 16813272 - 16813188
Alignment:
Q  28 gaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttg 113  Q
    ||||||| ||||||| |||||||  |||||||| ||| ||||| |||||||||||| ||| || ||| |||||||||||| |||||    
T  16813272 gaataccaagttcaactttcaggg-gaacaacgtttgaccagtacgcatgcctctatgcacgagccggattagtcgtccatctttg 16813188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 113
Target Start/End: Complemental strand, 16852551 - 16852467
Alignment:
Q  28 gaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttg 113  Q
    ||||||| ||||||| |||||||  |||||||| ||| ||||| |||||||||||| ||| || ||| |||||||||||| |||||    
T  16852551 gaataccaagttcaactttcaggg-gaacaacgtttgaccagtacgcatgcctctatgcacgagccggattagtcgtccatctttg 16852467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 90
Target Start/End: Original strand, 33005774 - 33005811
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatga 90  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  33005774 gaacaacacttggccagtgcgcatgcctctacgcatga 33005811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 44773287 - 44773360
Alignment:
Q  54 aacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||| |||||||||| ||||||||||  || ||| ||| ||||||||  |||||||||||| |||||||||    
T  44773287 aacaacgtttggccagtgtgcatgcctctgtgcgtgagccggattagtcgctcacctttgatgggtcggaaacc 44773360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 3602415 - 3602479
Alignment:
Q  177 gtgtgtgtttggttctgcggtgataaaaattgatttcgatataattgattttgaatgaattgatt 241  Q
    |||||||||||||||||||||||| |||||||||||  |   ||||||||||||  |||||||||    
T  3602415 gtgtgtgtttggttctgcggtgatgaaaattgatttttactgaattgattttgatagaattgatt 3602479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 14853487 - 14853380
Alignment:
Q  16 gatgtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgc--ctctacgcatgaaccgaattagtcgtccacctttg 113  Q
    |||||||||||||||||||   ||| |||||||||  |||||||  |||||||||||| ||||  |||||| |||||  || |||||||||||| ||||     
T  14853487 gatgtatccggggaataccagattcgattttcagggggaacaacttttggccagtgcgtatgcctctctactcatgagtcggattagtcgtccatcttta 14853388  T
Q  114 atggatcg 121  Q
     |||||||    
T  14853387 gtggatcg 14853380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 103
Target Start/End: Original strand, 15079476 - 15079556
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcg 103  Q
    ||||||||||| | |||| |||| ||||  |||||||||||| |||||| ||||| ||||||||| || || |||||||||    
T  15079476 ccggggaatacagggttcgatttccagggggaacaacgcttgaccagtgtgcatgactctacgcacgagccaaattagtcg 15079556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 28616495 - 28616403
Alignment:
Q  20 tatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccaccttt 112  Q
    |||||| |||||| || |||| |||||||||  ||| ||| ||||| ||||||||||||||||||||| || ||  |||||||| ||| ||||    
T  28616495 tatccgcggaatatcgggttcgattttcagggggaataacacttgggcagtgcgcatgcctctacgcacgagccagattagtcgcccatcttt 28616403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 103
Target Start/End: Complemental strand, 21180398 - 21180347
Alignment:
Q  52 agaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcg 103  Q
    |||||||| |||||||||||| |||||||||||||| || ||| ||||||||    
T  21180398 agaacaacacttggccagtgcacatgcctctacgcacgagccggattagtcg 21180347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 23267316 - 23267383
Alignment:
Q  174 taagtgtgtgtttggttctgcggtgataaaaattgatttcgatataattgattttgaatgaattgatt 241  Q
    |||||||||| |||||||||||||||    ||||||||| |||| |||||| ||||| ||||||||||    
T  23267316 taagtgtgtggttggttctgcggtgagtggaattgattttgatagaattgagtttgagtgaattgatt 23267383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 128
Target Start/End: Complemental strand, 33634510 - 33634447
Alignment:
Q  65 gccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacca 128  Q
    ||||||||||||||| || |||| || ||||||||||| || ||||||| ||||||| ||||||    
T  33634510 gccagtgcgcatgccgctgcgcacgagccgaattagtcatctacctttggtggatcgaaaacca 33634447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 76 - 127
Target Start/End: Complemental strand, 35443925 - 35443874
Alignment:
Q  76 tgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||||||||||| ||| ||||||||||||   |||||||||||||||||    
T  35443925 tgcctctacgcatgagccggattagtcgtccattattgatggatcggaaacc 35443874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 34346370 - 34346296
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||| ||||||||||| ||||||||||||||||||  |  |||| |||  |||||||| ||| |||||||||    
T  34346370 gaacaacacttggccagtgtgcatgcctctacgcatgagtcagattaatcgctcacctttggtgggtcggaaacc 34346296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 36480506 - 36480457
Alignment:
Q  65 gccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgg 117  Q
    |||||||||||||||||||||||||| |||    |||||||||||||||||||    
T  36480506 gccagtgcgcatgcctctacgcatgagccg---gagtcgtccacctttgatgg 36480457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 40969025 - 40968963
Alignment:
Q  26 gggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcat 88  Q
    |||||||||| |||| |||| |||| | ||||||| |||| ||||||| ||||||||||||||    
T  40969025 gggaataccgggttcgatttccagggaaaacaacgtttggtcagtgcgaatgcctctacgcat 40968963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 103
Target Start/End: Complemental strand, 18649136 - 18649059
Alignment:
Q  26 gggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcg 103  Q
    ||||||||||  ||| ||| |||||| ||||||   |||| ||||||||||||||||||||||||  || ||||||||    
T  18649136 gggaataccggattcgattctcaggaggaacaatatttgggcagtgcgcatgcctctacgcatgagtcggattagtcg 18649059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 70 - 127
Target Start/End: Original strand, 21641990 - 21642047
Alignment:
Q  70 tgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||||||||||||||||| |||||||| ||| || |||||| ||| ||| |||||    
T  21641990 tgcgcatgcctctacgcatgagccgaattaatcgcccgcctttggtgggtcgaaaacc 21642047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 2149315 - 2149243
Alignment:
Q  16 gatgtatccggggaataccg-agttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgca 87  Q
    |||||||| ||||||||||| ||||| |||  | ||  ||| |||| ||||||||||||||||||||||||||    
T  2149315 gatgtatctggggaataccggagttcgattcactgggggaataacgtttggccagtgcgcatgcctctacgca 2149243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 15234174 - 15234110
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgca 87  Q
    |||||||||||   |||| ||| |||||  ||||||| |||| ||||||||||||||||||||||    
T  15234174 ccggggaatactaggttcgattctcagggggaacaacacttgaccagtgcgcatgcctctacgca 15234110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 31224833 - 31224769
Alignment:
Q  177 gtgtgtgtttggttctgcggtgataaaaattgatttcgatataattgattttgaatgaattgatt 241  Q
    |||||| |||||||  |||||||  ||||||||||| |||| |||||| |||||| |||||||||    
T  31224833 gtgtgtatttggtttggcggtgacgaaaattgattttgatagaattgagtttgaaagaattgatt 31224769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 34130400 - 34130313
Alignment:
Q  37 gttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaa 125  Q
    |||| |||||||||| |||||||| ||| ||| ||| |||| |||||||||||| ||  |||||||||| ||| ||| | |||||||||    
T  34130400 gttcgattttcagga-gaacaacgtttgaccattgcacatgtctctacgcatgagccagattagtcgtctaccattggtagatcggaaa 34130313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 39141425 - 39141489
Alignment:
Q  177 gtgtgtgtttggttctgcggtgataaaaattgatttcgatataattgattttgaatgaattgatt 241  Q
    ||||||||||||||  ||||||   | ||||||||| ||||||||||| |||||| |||||||||    
T  39141425 gtgtgtgtttggttgggcggtggcgagaattgattttgatataattgagtttgaaagaattgatt 39141489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 1e-34; HSPs: 83)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 14254386 - 14254276
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    |||| ||||||||||||||||| |||||||||  |||||||||||||||||| ||||||||| ||||||||| ||| ||||||||||||||||||||||     
T  14254386 gtattcggggaataccgagttcgattttcagggggaacaacgcttggccagtacgcatgcctttacgcatgagccggattagtcgtccacctttgatggg 14254287  T
Q  119 tcggaaaccat 129  Q
    |||||||||||    
T  14254286 tcggaaaccat 14254276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 10336506 - 10336614
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    |||||||| ||||| || |||| |||||||||  |||||||||||| ||||||||||||||||||||||||| ||| |||| ||||||||||||||||||    
T  10336506 gtatccggagaatatcgggttcgattttcagggggaacaacgcttgaccagtgcgcatgcctctacgcatgagccggattaatcgtccacctttgatgga 10336605  T
Q  119 tcggaaacc 127  Q
    ||| |||||    
T  10336606 tcgaaaacc 10336614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 16263535 - 16263643
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||| ||||||||||  |||| |||| ||||| |||||||||||||||||||||||||||||||||||| | ||| | ||||||||||| |||||||||    
T  16263535 gtatctggggaataccaggttcgatttccaggaggaacaacgcttggccagtgcgcatgcctctacgcataagccggaatagtcgtccacttttgatgga 16263634  T
Q  119 tcggaaacc 127  Q
    |||||||||    
T  16263635 tcggaaacc 16263643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 121
Target Start/End: Complemental strand, 33498947 - 33498855
Alignment:
Q  29 aataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcg 121  Q
    ||||||| |||| ||| |||||| || ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  33498947 aataccgggttcgattctcaggaggagcaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttgatggatcg 33498855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 27 - 127
Target Start/End: Complemental strand, 32142956 - 32142856
Alignment:
Q  27 ggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaac 126  Q
    ||||||||| |||| |||||||||  ||||||| |||||||||||||||||||| ||||||||| ||||||||||||  |||||||||||| ||||||||    
T  32142956 ggaataccgggttcgattttcagggggaacaacacttggccagtgcgcatgcctttacgcatgagccgaattagtcgctcacctttgatgggtcggaaac 32142857  T
Q  127 c 127  Q
    |    
T  32142856 c 32142856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 10422778 - 10422872
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttg 113  Q
    |||| |||||||||||| |||| ||||  |||| ||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  10422778 gtattcggggaataccgggttcgatttctaggaggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttg 10422872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 32889 - 32969
Alignment:
Q  47 caggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||| ||||||||||||| |||||| ||||||||||||||||| |||||||||||||| || ||||||||||||||||||    
T  32889 caggaggaacaacgcttggtcagtgcacatgcctctacgcatgagccgaattagtcgtctacttttgatggatcggaaacc 32969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 5855512 - 5855620
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    |||| |||||||||||| |||| |||  ||||| ||||||||||||||||||||||||||||||||||||||  || ||||||||| |||||||  |||     
T  5855512 gtattcggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgaggcggattagtcgttcacctttagtggg 5855611  T
Q  119 tcggaaacc 127  Q
    |||||||||    
T  5855612 tcggaaacc 5855620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 43959935 - 43959831
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    |||||||||| || ||||||||  ||||  ||||||||||||||||||||||||||||||||||| || ||| |||||||| ||||||||  ||||||||    
T  43959935 ccggggaatatcgggttcaattcccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttagtggatcgg 43959836  T
Q  123 aaacc 127  Q
    |||||    
T  43959835 aaacc 43959831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 127
Target Start/End: Complemental strand, 45361993 - 45361892
Alignment:
Q  26 gggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaa 125  Q
    |||||||||| |||| ||| |||||| ||||||||||||||||||||||||||| |||||||| | ||| ||||||||| |||||||  ||| |||||||    
T  45361993 gggaataccgggttcgattctcaggaggaacaacgcttggccagtgcgcatgccactacgcataagccggattagtcgttcacctttagtgggtcggaaa 45361894  T
Q  126 cc 127  Q
    ||    
T  45361893 cc 45361892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 10173089 - 10172981
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||| |||||||||||  |||||||  ||  |||||||||||||||||||||| ||||||||||||||||| ||| |||| ||| ||||||||| |||     
T  10173089 gtatctggggaataccggattcaattcccataaagaacaacgcttggccagtgcccatgcctctacgcatgagccggattactcgcccacctttggtggg 10172990  T
Q  119 tcggaaacc 127  Q
    |||||||||    
T  10172989 tcggaaacc 10172981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 41663974 - 41663866
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||||||||||||||| |||| |||  ||||  ||||||| ||||| |||||||||||||||||||||||| | | |||||||||||||| ||| |||     
T  41663974 gtatccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctctacgcatgagctggattagtcgtccaccattggtggg 41663875  T
Q  119 tcggaaacc 127  Q
    |||||||||    
T  41663874 tcggaaacc 41663866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 120
Target Start/End: Complemental strand, 38791693 - 38791627
Alignment:
Q  54 aacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatc 120  Q
    ||||||| ||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  38791693 aacaacgattggcaagtgcgcatgcctctacgcatgagccgaattagtcgtccatctttgatggatc 38791627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 61 - 127
Target Start/End: Complemental strand, 42710214 - 42710148
Alignment:
Q  61 cttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||| | |||||||||||    
T  42710214 cttggccagtgcgcatgcctctacgcataaaccgaattagtcgtccaccattggtagatcggaaacc 42710148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 37 - 127
Target Start/End: Complemental strand, 50371934 - 50371844
Alignment:
Q  37 gttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||| ||||||||||||||||||||||||||||| ||||||| ||||||||  | ||| |||||||| ||| ||||| |||||||||||||    
T  50371934 gttcgattttcaggaagaacaacgcttggccagtacgcatgcttctacgcacaagccggattagtcgcccatctttggtggatcggaaacc 50371844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 17642088 - 17642015
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaac 126  Q
    ||||||| ||||||||||||||||||||||||||| || ||| |||||||||||||||||| ||| ||||||||    
T  17642088 gaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtgggtcggaaac 17642015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 5504021 - 5504129
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||| |||||||| |  |||| ||| ||||| | |||||||||||   ||||| ||||||||||||||||| ||| ||||||||||||||||||||||     
T  5504021 gtatctggggaatatcaggttcgattctcagggaaaacaacgcttgattagtgcacatgcctctacgcatgagccggattagtcgtccacctttgatggg 5504120  T
Q  119 tcggaaacc 127  Q
    |||||||||    
T  5504121 tcggaaacc 5504129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 51 - 127
Target Start/End: Complemental strand, 46929824 - 46929748
Alignment:
Q  51 aagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||||||||||||| |||||||||||| || ||||| ||| ||||||||||||| |||||||||||| |||||    
T  46929824 aagaacaacgcttggccaatgcgcatgcctccacacatgagccggattagtcgtccacttttgatggatcgaaaacc 46929748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 49078104 - 49078212
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||||||||||||||| |||| |||  ||||   |||||| |||||||||||||||||||||||||||||| ||| ||||||||| |||| ||| | |     
T  49078104 gtatccggggaataccgggttcgattcccaggggaaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgttcaccattggtagg 49078203  T
Q  119 tcggaaacc 127  Q
    |||||||||    
T  49078204 tcggaaacc 49078212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 127
Target Start/End: Original strand, 44969687 - 44969762
Alignment:
Q  52 agaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||||||||||||||| ||||||| |||||||||| ||| |||||||||||| | ||| |||||||||||||    
T  44969687 agaacaacgcttggccagtgtgcatgcccctacgcatgagccggattagtcgtccatcattggtggatcggaaacc 44969762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 8764015 - 8764089
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||| ||||||||||||||||||||||||||| || ||| |||||||||||||| ||| ||| |||||||||    
T  8764015 gaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgtccaccgttggtgggtcggaaacc 8764089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 26325836 - 26325910
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||| ||||| |||||||||||||||||||||||| ||| |||||||||||||| ||| ||| |||||||||    
T  26325836 gaacaacacttggtcagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaacc 26325910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 33418197 - 33418124
Alignment:
Q  55 acaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacca 128  Q
    ||||||||||||||||||||||||||||| ||| || ||| |||||||||||||||||| | | ||||||||||    
T  33418197 acaacgcttggccagtgcgcatgcctctatgcacgagccggattagtcgtccacctttggtcggtcggaaacca 33418124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 12036828 - 12036756
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaa 125  Q
    |||||| |||||||||||||||||||||||||||| || ||  |||| ||||||||||||| |||||||||||    
T  12036828 gaacaatgcttggccagtgcgcatgcctctacgcacgagccagattaatcgtccacctttggtggatcggaaa 12036756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 17092595 - 17092487
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    |||| |||| |||| ||||||| |||||||||   ||||||| |||||||||| | ||||||||||||| || ||| |||||||||||||||||| | ||    
T  17092595 gtattcgggaaatatcgagttcgattttcaggggaaacaacgattggccagtgtgtatgcctctacgcacgagccggattagtcgtccacctttggtaga 17092496  T
Q  119 tcggaaacc 127  Q
    || ||||||    
T  17092495 tcagaaacc 17092487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 174 - 241
Target Start/End: Complemental strand, 25061397 - 25061330
Alignment:
Q  174 taagtgtgtgtttggttctgcggtgataaaaattgatttcgatataattgattttgaatgaattgatt 241  Q
    |||||||||||||||||||||||||| |||||||||||| | || |||||||||||  ||||||||||    
T  25061397 taagtgtgtgtttggttctgcggtgacaaaaattgattttgttaaaattgattttggttgaattgatt 25061330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 48798188 - 48798105
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtc 102  Q
    |||||||||||||| || |||| |||| ||||  |||||||||||| | ||||||||||||||||||||||| ||| |||||||    
T  48798188 gtatccggggaatatcgggttcgatttccagggggaacaacgcttgactagtgcgcatgcctctacgcatgagccggattagtc 48798105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 127
Target Start/End: Complemental strand, 4581758 - 4581692
Alignment:
Q  61 cttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||||||||||||||||||||||| || ||| | |||||||||||||||| ||| |||||||||    
T  4581758 cttggccagtgcgcatgcctctacgcacgagccggaatagtcgtccacctttggtgggtcggaaacc 4581692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 30927811 - 30927737
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||||||||||| || |||||||||||||||||| ||| ||||||||||||| |||| ||| || ||||||    
T  30927811 gaacaacgcttggccaatgtgcatgcctctacgcatgagccggattagtcgtccacttttggtgggtcagaaacc 30927737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 35211256 - 35211182
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||| |||| |||| | ||||||||||||||||||| | |||||||||||||||||||| ||| |||||||||    
T  35211256 gaacaatgcttagccaatacgcatgcctctacgcatgagctgaattagtcgtccacctttggtgggtcggaaacc 35211182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 10507716 - 10507797
Alignment:
Q  47 caggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacca 128  Q
    ||||| |||||||| |||||||||| |||| ||||||||||||| ||| ||||||||||||||  || ||| ||||||||||    
T  10507716 caggaggaacaacgtttggccagtgtgcatacctctacgcatgagccggattagtcgtccaccactggtgggtcggaaacca 10507797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 11398009 - 11397901
Alignment:
Q  16 gatgtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgat 115  Q
    ||||||||||| |||||||| |||| |||   |||  |||||||| ||||||| |||| ||||||||||||||||  || |||||||||||||||||| |    
T  11398009 gatgtatccggagaataccgggttcgattccgaggg-gaacaacgtttggccaatgcgtatgcctctacgcatgagtcggattagtcgtccacctttggt 11397911  T
Q  116 ggatcggaaa 125  Q
    || |||||||    
T  11397910 gggtcggaaa 11397901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 107
Target Start/End: Complemental strand, 17988743 - 17988690
Alignment:
Q  54 aacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtcca 107  Q
    ||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  17988743 aacaatgcttggccagtgcgcatacctctacgcatgaaccggattagtcgtcca 17988690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 2567266 - 2567374
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    |||| ||| |||||||| |||| |||||| || | ||||||||||||||||||||||||||||||| || ||  |  ||||| |||||| ||||| |||     
T  2567266 gtattcggagaataccgggttcgattttcggggaaaacaacgcttggccagtgcgcatgcctctactcacgagtcagattagccgtccatctttggtggg 2567365  T
Q  119 tcggaaacc 127  Q
    |||||||||    
T  2567366 tcggaaacc 2567374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 34697325 - 34697433
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    |||| |||||||||||  |||| ||| | |||  ||||||| |||||| |||| |||||||||||||||||| ||| |||||||| |||| ||||||||     
T  34697325 gtattcggggaataccaggttcgattcttagggggaacaacacttggctagtgtgcatgcctctacgcatgagccggattagtcgcccacttttgatggg 34697424  T
Q  119 tcggaaacc 127  Q
    | |||||||    
T  34697425 ttggaaacc 34697433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 127
Target Start/End: Original strand, 37339846 - 37339918
Alignment:
Q  55 acaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||||||||||||||||||||||| ||||| || ||| |||||||| ||||||||| ||| | |||||||    
T  37339846 acaacgcttggccagtgcgcatgcctcaacgcacgagccggattagtcgcccacctttggtgggttggaaacc 37339918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 45726543 - 45726447
Alignment:
Q  27 ggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgga 123  Q
    ||||||||  |||| ||| |||||| ||| |||  |||||||||||| ||| |||||||||||| ||| ||||||||| |||||||| |||||||||    
T  45726543 ggaatacctggttcgattctcaggaggaataacatttggccagtgcgtatgtctctacgcatgagccggattagtcgttcacctttggtggatcgga 45726447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 9659291 - 9659189
Alignment:
Q  24 cggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgga 123  Q
    |||||||||||| |||| |||  ||||  |||||||| ||| | ||||||||||||| ||||||||| ||| |||||||||||||||||| ||| | |||    
T  9659291 cggggaataccgggttcgattcccaggg-gaacaacgtttgactagtgcgcatgcctttacgcatgagccggattagtcgtccacctttggtgggttgga 9659193  T
Q  124 aacc 127  Q
    ||||    
T  9659192 aacc 9659189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 13262070 - 13262181
Alignment:
Q  16 gatgtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgat 115  Q
    |||||||  ||||||||||| |||| |||| |||| ||||||||| |||| || | |||||| ||||||||| ||  || |||||||||||||| ||||     
T  13262070 gatgtatatggggaataccgggttcgatttccagggagaacaacgtttggtcaatacgcatgtctctacgcacgagtcggattagtcgtccaccattgaa 13262169  T
Q  116 ggatcggaaacc 127  Q
    |||||| |||||    
T  13262170 ggatcgaaaacc 13262181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 32151006 - 32150932
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||  |||| |||||||||||||| ||||||||| ||||||||||||  |||||||||||| ||| |||||    
T  32151006 gaacaacatttggtcagtgcgcatgcctttacgcatgagccgaattagtcgctcacctttgatgggtcgaaaacc 32150932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 103
Target Start/End: Complemental strand, 12744618 - 12744557
Alignment:
Q  42 attttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcg 103  Q
    |||||||||  |||||||||||| | |||||||||| |||||||||||| ||||||||||||    
T  12744618 attttcagggggaacaacgcttgactagtgcgcatgtctctacgcatgagccgaattagtcg 12744557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 103
Target Start/End: Complemental strand, 12755608 - 12755547
Alignment:
Q  42 attttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcg 103  Q
    |||||||||  |||||||||||| | |||||||||| |||||||||||| ||||||||||||    
T  12755608 attttcagggggaacaacgcttgactagtgcgcatgtctctacgcatgagccgaattagtcg 12755547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 14357780 - 14357853
Alignment:
Q  54 aacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||| ||| |||||||||||||||||||||| |||||| |||| ||||  ||| ||||||| |||||||||    
T  14357780 aacaacgtttgaccagtgcgcatgcctctacgcacgaaccggattaatcgtttaccattgatgggtcggaaacc 14357853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 128
Target Start/End: Original strand, 16956460 - 16956565
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    ||||||||||||| ||||  || |||||   ||||||| ||| |||||||||||||||||||||| || ||| |||||||   |||||||| ||| ||||    
T  16956460 ccggggaataccgtgttcggttctcaggggtaacaacgtttgaccagtgcgcatgcctctacgcacgagccggattagtcactcacctttggtgggtcgg 16956559  T
Q  123 aaacca 128  Q
    ||||||    
T  16956560 aaacca 16956565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 17358583 - 17358518
Alignment:
Q  25 ggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatga 90  Q
    ||||||||||| |||| ||| ||||| ||||||||||||| ||| ||||||||||| |||||||||    
T  17358583 ggggaataccgggttcgattctcagggagaacaacgcttgaccaatgcgcatgcctttacgcatga 17358518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 19195391 - 19195459
Alignment:
Q  54 aacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||| ||||||||||||||||||||||||||||| ||||     ||||||||||||||||  |||||||||    
T  19195391 aacaacgtttggccagtgcgcatgcctctacgcatgagccga-----tcgtccacctttgatgagtcggaaacc 19195459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 26258690 - 26258778
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccaccttt 112  Q
    |||||||||||||  ||| ||| ||||||||| |||||||||| |||||| ||||||| |||||||||  || |||| ||||||||||||    
T  26258690 ccggggaataccggattcgattctcaggaaga-caacgcttggtcagtgcacatgcctttacgcatgagtcggattaatcgtccaccttt 26258778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 18649470 - 18649362
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||| || ||||| || |||| |||||||||  |||||||||||| |||||||||||||||||||| | || ||  |||| ||| ||||||||  ||||    
T  18649470 gtatctggagaatatcgggttcgattttcagggggaacaacgcttgaccagtgcgcatgcctctacgtacgagccagattaatcgcccacctttagtgga 18649371  T
Q  119 tcggaaacc 127  Q
    | |||||||    
T  18649370 ttggaaacc 18649362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 103
Target Start/End: Original strand, 18915861 - 18915941
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcg 103  Q
    ||||||||||||| |||| |||  ||||  ||||||| ||||||||||| ||||||||||||||| || ||| ||||||||    
T  18915861 ccggggaataccgggttcgattcccagggggaacaacacttggccagtgtgcatgcctctacgcacgagccggattagtcg 18915941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 26660128 - 26660235
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    |||| |||||||||||| |||| |||| || |  |||||||  |||  |||| ||||||||||||||||||| ||| |||||||| ||||||||| |||     
T  26660128 gtattcggggaataccgggttcgatttccacggggaacaacatttgatcagtacgcatgcctctacgcatgagccggattagtcg-ccacctttggtggg 26660226  T
Q  119 tcggaaacc 127  Q
    |||||||||    
T  26660227 tcggaaacc 26660235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 35908754 - 35908838
Alignment:
Q  26 gggaataccgagttcaattttcaggaagaacaacgctt-ggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacc 109  Q
    ||||||||||  ||| ||||| |||  ||||||| ||| || |||||||||||||||||||||||| ||| ||||||||||||||    
T  35908754 gggaataccggattcgatttttagggggaacaacactttggtcagtgcgcatgcctctacgcatgagccggattagtcgtccacc 35908838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 50503479 - 50503371
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    |||||||||||||| || |||| |||  ||||  ||||||| |||| |||||||||||||||||||||| || ||| ||| |||| |||||  || |||     
T  50503479 gtatccggggaatatcgggttcgattcccagggggaacaacacttgaccagtgcgcatgcctctacgcacgagccggatttgtcgcccaccaatggtggg 50503380  T
Q  119 tcggaaacc 127  Q
    |||||||||    
T  50503379 tcggaaacc 50503371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 127
Target Start/End: Original strand, 6899597 - 6899656
Alignment:
Q  68 agtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||||||||| ||||||  | ||| |||||||| |||||||||||||||||||||||    
T  6899597 agtgcgcatgcctttacgcacaagccggattagtcgcccacctttgatggatcggaaacc 6899656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 33004133 - 33004050
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtc 102  Q
    |||||||||||||| ||  ||| |||| ||||   ||||| |||||||||||||||||||||||||||| || ||| |||||||    
T  33004133 gtatccggggaatatcggattcgatttccaggggaaacaatgcttggccagtgcgcatgcctctacgcacgagccggattagtc 33004050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 103
Target Start/End: Complemental strand, 21849289 - 21849239
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcg 103  Q
    |||||||||||||| |||||||||||||||||||| || ||| ||||||||    
T  21849289 gaacaacgcttggctagtgcgcatgcctctacgcacgagccggattagtcg 21849239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 127
Target Start/End: Complemental strand, 31576655 - 31576557
Alignment:
Q  29 aataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||| |||| ||| |||||   ||||| ||||||||| ||||  ||||||||||||||| |||  ||||||||||| ||||||||  |||||||||    
T  31576655 aataccgggttcgattctcaggggaaacaatgcttggccaatgcgtgtgcctctacgcatgagccggcttagtcgtccatctttgatgtgtcggaaacc 31576557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 110
Target Start/End: Original strand, 13265974 - 13266019
Alignment:
Q  65 gccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacct 110  Q
    |||||||||||||||||||||||||| |||  ||||||||||||||    
T  13265974 gccagtgcgcatgcctctacgcatgagccgggttagtcgtccacct 13266019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 241
Target Start/End: Complemental strand, 29441353 - 29441288
Alignment:
Q  176 agtgtgtgtttggttctgcggtgataaaaattgatttcgatataattgattttgaatgaattgatt 241  Q
    |||||||||||| |||||||||||  | ||||||||| |||| |||||| ||||| ||||||||||    
T  29441353 agtgtgtgtttgattctgcggtgagtagaattgattttgatagaattgagtttgagtgaattgatt 29441288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 31152703 - 31152800
Alignment:
Q  16 gatgtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttg 113  Q
    |||||| || |||||||||| |||| |||| | ||  ||| ||||||||| |||||||| ||||||||| || ||  | |||||||||||||||||||    
T  31152703 gatgtacccagggaataccgggttcgatttcccgggggaataacgcttggtcagtgcgcgtgcctctacacacgagtcaaattagtcgtccacctttg 31152800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 40288595 - 40288486
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    |||| |||||||||||| |||| |||| ||||  |||||||| |||||||||  |||||||||||| || || ||| ||||||||  || | ||| |||     
T  40288595 gtattcggggaataccgggttcgatttccagggggaacaacggttggccagtatgcatgcctctacacacgagccggattagtcgctcatccttggtggg 40288496  T
Q  119 tcggaaacca 128  Q
    ||||||||||    
T  40288495 tcggaaacca 40288486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 2981049 - 2980961
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtcca 107  Q
    ||||||||||||||| | |||| |||  |||   ||||||| ||||||||||| ||||||||||||||| ||  || ||||||||||||    
T  2981049 gtatccggggaatactgggttcgattcccagcgggaacaacacttggccagtgtgcatgcctctacgcacgagtcggattagtcgtcca 2980961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 28324663 - 28324615
Alignment:
Q  54 aacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtc 102  Q
    |||||| ||||| |||||||||||||||||||||||| ||| |||||||    
T  28324663 aacaacacttggtcagtgcgcatgcctctacgcatgagccggattagtc 28324615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 34334413 - 34334353
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcc 79  Q
    ||||||||||||||||| |||| |||  ||||  ||||||| |||||||||||||||||||    
T  34334413 gtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcc 34334353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 48761164 - 48761260
Alignment:
Q  17 atgtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttg 113  Q
    |||||||| || ||||| |  ||| ||||||| || |||||||| |||| |||||  |||||||||||||| || | | ||||||||||||||||||    
T  48761164 atgtatcccggaaatactggattcgattttcaagaggaacaacgtttggtcagtggacatgcctctacgcacgagctggattagtcgtccacctttg 48761260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 212
Target Start/End: Complemental strand, 5167430 - 5167395
Alignment:
Q  177 gtgtgtgtttggttctgcggtgataaaaattgattt 212  Q
    |||||||||||||||||||||||| |||||||||||    
T  5167430 gtgtgtgtttggttctgcggtgatgaaaattgattt 5167395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 7826309 - 7826376
Alignment:
Q  174 taagtgtgtgtttggttctgcggtgataaaaattgatttcgatataattgattttgaatgaattgatt 241  Q
    |||||||||||||||||  ||||||   ||||||||||| |||| ||||||||||||  |||||||||    
T  7826309 taagtgtgtgtttggtttggcggtggagaaaattgattttgatagaattgattttgagagaattgatt 7826376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 109
Target Start/End: Original strand, 31734313 - 31734368
Alignment:
Q  54 aacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacc 109  Q
    ||||||| |||||||||||||||||||||||| | || || ||||| |||||||||    
T  31734313 aacaacgattggccagtgcgcatgcctctacgtacgagccaaattaatcgtccacc 31734368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 104
Target Start/End: Complemental strand, 47312983 - 47312932
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgt 104  Q
    |||||||| |||||||||||| |||||||||||||||| ||  |||||||||    
T  47312983 gaacaacgtttggccagtgcgtatgcctctacgcatgagccagattagtcgt 47312932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 5143237 - 5143164
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||||||||| |||| ||||||||||||||||  |  || ||||||||  |||||||||||||||| |||||    
T  5143237 gaacaacgcttggtcagtacgcatgcctctacgca-cagacggattagtcgctcacctttgatggatcgaaaacc 5143164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 7765239 - 7765293
Alignment:
Q  174 taagtgtgtgtttggttctgcggtgataaaaattgatttcgatataattgatttt 228  Q
    ||||||||||||||||| ||||||||  | ||||||||| |||| ||||||||||    
T  7765239 taagtgtgtgtttggttatgcggtgacgagaattgattttgatagaattgatttt 7765293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 15465961 - 15466023
Alignment:
Q  25 ggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgca 87  Q
    ||||||||||  |||| |||| ||||  ||||||||||||| |||||| ||||||||||||||    
T  15465961 ggggaataccaggttcgatttccagggggaacaacgcttggtcagtgcacatgcctctacgca 15466023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 34571082 - 34571132
Alignment:
Q  176 agtgtgtgtttggttctgcggtgataaaaattgatttcgatataattgatt 226  Q
    ||||||||||||||| |||||||| ||||||||||||  ||| ||||||||    
T  34571082 agtgtgtgtttggttatgcggtgacaaaaattgattttcataaaattgatt 34571132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 87
Target Start/End: Original strand, 42744802 - 42744836
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgca 87  Q
    ||||||||||||||||||| |||||||||||||||    
T  42744802 gaacaacgcttggccagtgagcatgcctctacgca 42744836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 87
Target Start/End: Original strand, 45536732 - 45536766
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgca 87  Q
    |||||||||||||||||||| ||||||||||||||    
T  45536732 gaacaacgcttggccagtgcacatgcctctacgca 45536766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 50094928 - 50095002
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||| ||| ||||| ||||||| |||||||||||  || |||||||||||||| ||  ||| |||||||||    
T  50094928 gaacaacgtttgaccagtacgcatgcttctacgcatgagtcggattagtcgtccaccattagtgggtcggaaacc 50095002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 42094 - 42041
Alignment:
Q  176 agtgtgtgtttggttctgcggtgataaaaattgatttcgatataattgattttg 229  Q
    |||||||||||| ||||||||||   ||||||||||| |||| |||||||||||    
T  42094 agtgtgtgtttgattctgcggtggagaaaattgattttgataaaattgattttg 42041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 18708617 - 18708560
Alignment:
Q  60 gcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgg 117  Q
    ||||||| ||||||||||||||||| ||||| ||  ||||||||  ||||||||||||    
T  18708617 gcttggctagtgcgcatgcctctacacatgagccagattagtcgctcacctttgatgg 18708560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 34719804 - 34719873
Alignment:
Q  57 aacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaac 126  Q
    |||||||| |||||||||||||||||||||| ||  |  ||||||||  |||||||| ||| ||||||||    
T  34719804 aacgcttgaccagtgcgcatgcctctacgcacgagtcagattagtcgctcacctttggtgggtcggaaac 34719873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 40352559 - 40352506
Alignment:
Q  176 agtgtgtgtttggttctgcggtgataaaaattgatttcgatataattgattttg 229  Q
    ||||||||||||||| ||||||||  | ||||||||| |||| |||||||||||    
T  40352559 agtgtgtgtttggttgtgcggtgaggagaattgattttgatagaattgattttg 40352506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 41696674 - 41696609
Alignment:
Q  61 cttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaac 126  Q
    |||| |||||| | ||||||||||||| ||| |  ||||||||  |||||||||||||||||||||    
T  41696674 cttgaccagtgtgtatgcctctacgcacgaatcagattagtcgctcacctttgatggatcggaaac 41696609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 213172 - 213216
Alignment:
Q  182 tgtttggttctgcggtgataaaaattgatttcgatataattgatt 226  Q
    |||||||||||||||||| |||||||||||| |||  ||||||||    
T  213172 tgtttggttctgcggtgacaaaaattgattttgattaaattgatt 213216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 646300 - 646252
Alignment:
Q  182 tgtttggttctgcggtgataaaaattgatttcgatataattgattttga 230  Q
    ||||||||| |||||||| || ||||||||| || ||||||||||||||    
T  646300 tgtttggttttgcggtgacaataattgattttgagataattgattttga 646252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 50952261 - 50952321
Alignment:
Q  57 aacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgg 117  Q
    |||| |||||||||| ||||||||||||||| ||  | ||||||||  |||||||||||||    
T  50952261 aacgattggccagtgtgcatgcctctacgcacgagacaaattagtcacccacctttgatgg 50952321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 8e-30; HSPs: 92)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 20532522 - 20532420
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    |||| ||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||| ||| || ||||| ||||||||| ||||||||    
T  20532522 ccggagaataccgagttcgatttccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggataagtcgcccacctttggtggatcgg 20532423  T
Q  123 aaa 125  Q
    |||    
T  20532422 aaa 20532420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 29895781 - 29895889
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||||||||||||||| |||| |||  ||||  ||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||| ||| |||     
T  29895781 gtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtggt 29895880  T
Q  119 tcggaaacc 127  Q
    |||||||||    
T  29895881 tcggaaacc 29895889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 42722690 - 42722601
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccaccttt 112  Q
    ||||| ||||||| ||||||||  ||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||    
T  42722690 ccgggaaataccgggttcaattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgttcaccttt 42722601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 49260785 - 49260676
Alignment:
Q  16 gatgtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgat 115  Q
    |||||||||||||||||| || |||||||  || |  ||||||||||||||||||||||||||||||||||| || ||| |||||||| ||||||||| |    
T  49260785 gatgtatccggggaatactgaattcaattcccaaggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgaccacctttggt 49260686  T
Q  116 ggatcggaaa 125  Q
    || |||||||    
T  49260685 gggtcggaaa 49260676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 38075427 - 38075535
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    |||| ||| |||||||| |||| ||| |||||   ||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||| |||     
T  38075427 gtattcggagaataccgggttcgattctcaggggaaacaacgcttggccagtgcgcatgcctctacgcatgagccgaattaattgtccacctttggtggg 38075526  T
Q  119 tcggaaacc 127  Q
    |||||||||    
T  38075527 tcggaaacc 38075535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 53599058 - 53599162
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    ||||||||||||| |||| |||  ||||| |||||||| ||||||||||||||||||||||||||||| ||| |||| |||| |||||||  ||||||||    
T  53599058 ccggggaataccgggttcgattcccaggaggaacaacgtttggccagtgcgcatgcctctacgcatgagccggattaatcgttcacctttagtggatcgg 53599157  T
Q  123 aaacc 127  Q
    |||||    
T  53599158 aaacc 53599162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 176 - 252
Target Start/End: Complemental strand, 54683518 - 54683442
Alignment:
Q  176 agtgtgtgtttggttctgcggtgataaaaattgatttcgatataattgattttgaatgaattgattcagatcaaaag 252  Q
    |||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||| || ||||||    
T  54683518 agtgtgtgtttggttctgcggtgaaaaaaattgattttgatagaattgattttgaatgaattgattccgaccaaaag 54683442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 16645117 - 16645220
Alignment:
Q  24 cggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgga 123  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||| |||||  |  |||||||| |||||| || ||| |||||    
T  16645117 cggggaataccgggttcgattttcaggaagaacaacgcttggccagtgtgcatgcctctacacatgagtctgattagtcgcccacctgtggtgggtcgga 16645216  T
Q  124 aacc 127  Q
    ||||    
T  16645217 aacc 16645220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 1446820 - 1446910
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacc 109  Q
    ||||||||||||||||| |||| |||  ||||  ||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  1446820 gtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacc 1446910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 127
Target Start/End: Original strand, 4738630 - 4738720
Alignment:
Q  37 gttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||| |||| ||||| ||||||||||| ||||||||||||| |||||||||||| | |||||||||||||||||||| ||| |||||||||    
T  4738630 gttcgatttccaggaggaacaacgctttgccagtgcgcatgtctctacgcatgagctgaattagtcgtccacctttggtgggtcggaaacc 4738720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 7246729 - 7246655
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||| ||| |||||||||    
T  7246729 gaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaacc 7246655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 17080071 - 17080145
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||  |||||||||||||||| |||||    
T  17080071 gaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcacacctttgatggatcgaaaacc 17080145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 40780944 - 40780870
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||| ||| |||||||||    
T  40780944 gaacaacgcttggtcagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaacc 40780870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 41162999 - 41162893
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||||||| |||||||||||| |||| |||   ||||||| |||||||||||  ||||| |||| |||||| |||||||||||| ||||||||||||||    
T  41162999 gtatccgggaaataccgagttcgatttccagagggaacaacacttggccagtgtacatgcttctatgcatgagccgaattagtcgcccacctttgatgga 41162900  T
Q  119 tcggaaa 125  Q
    |||||||    
T  41162899 tcggaaa 41162893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 8889016 - 8889124
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||||||||||||||| |||| |||   |||  ||||||| ||||| ||||||||||| |||||||||||| ||| |||||||||||||||||| |||     
T  8889016 gtatccggggaataccgggttcgattcctagggggaacaacacttgggcagtgcgcatggctctacgcatgagccggattagtcgtccacctttggtggg 8889115  T
Q  119 tcggaaacc 127  Q
    |||||||||    
T  8889116 tcggaaacc 8889124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 33647715 - 33647823
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||| ||||||||||| |||| |||| |||| ||||||||||||| ||||||| ||| |||||||||| |||||  ||||||||| || ||||| ||||    
T  33647715 gtatctggggaataccgggttcgatttccagggagaacaacgcttgaccagtgcacattcctctacgcacgaaccagattagtcgttcatctttggtgga 33647814  T
Q  119 tcggaaacc 127  Q
    |||||||||    
T  33647815 tcggaaacc 33647823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 36145328 - 36145224
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    ||||||||||||| |||| |||  ||||   |||||||||||  |||||||||||||||||| ||||| ||| ||||||||||||||||||||| |||||    
T  36145328 ccggggaataccgggttcgattcccaggggaaacaacgcttgatcagtgcgcatgcctctacacatgagccggattagtcgtccacctttgatgaatcgg 36145229  T
Q  123 aaacc 127  Q
    |||||    
T  36145228 aaacc 36145224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 2559307 - 2559409
Alignment:
Q  25 ggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaa 124  Q
    |||||||||||  ||| ||||  |||| |||||||||||||||||||||||||||||||||||  | ||| |||| ||||||||||||| ||| ||||||    
T  2559307 ggggaataccggattcgatttctaggaggaacaacgcttggccagtgcgcatgcctctacgcacaagccggattactcgtccacctttggtgggtcggaa 2559406  T
Q  125 acc 127  Q
    |||    
T  2559407 acc 2559409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 52950110 - 52950184
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||||||||||||||||||||| |||||| ||||||||  |||||||||||||||||| ||| |||||||||    
T  52950110 gaacaacgcttggccagtgcgcatgactctacacatgaaccagattagtcgtccacctttggtgggtcggaaacc 52950184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 127
Target Start/End: Complemental strand, 14597974 - 14597909
Alignment:
Q  62 ttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||| |||||    
T  14597974 ttggccagtgcgcatgcctctacgcacgaactggattagtcgtccacctttgatggatcgaaaacc 14597909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 38166021 - 38166129
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||||||||||||| | |||  |||  ||||  ||||||||||||||||||||||||| ||||||||| || ||| |||||||| ||||||||| |||     
T  38166021 gtatccggggaatactgggttggattcccagggggaacaacgcttggccagtgcgcatggctctacgcacgagccggattagtcgcccacctttggtggg 38166120  T
Q  119 tcggaaacc 127  Q
    |||||||||    
T  38166121 tcggaaacc 38166129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 43458635 - 43458715
Alignment:
Q  47 caggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||| ||| ||||||||||||||||||||||||||||| | || ||| |||||||||||||||||||||  |||||||||    
T  43458635 caggaggaagaacgcttggccagtgcgcatgcctctacggacgagccggattagtcgtccacctttgatgagtcggaaacc 43458715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 226
Target Start/End: Complemental strand, 3652796 - 3652741
Alignment:
Q  171 cattaagtgtgtgtttggttctgcggtgataaaaattgatttcgatataattgatt 226  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  3652796 cattaagtgtgtgtttggttctgcggtgataaaaattgattttgatagaattgatt 3652741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 5472965 - 5472858
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||||||||||||||  |||  ||| |||||   |||||||||||||||||||||||||||||||||| || ||| |||||||| ||||||||| |||     
T  5472965 gtatccggggaataccaggtttgattctcaggggaaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtggg 5472866  T
Q  119 tcggaaac 126  Q
    ||| ||||    
T  5472865 tcgaaaac 5472858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 108
Target Start/End: Original strand, 20354641 - 20354720
Alignment:
Q  29 aataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccac 108  Q
    |||||||||||  |||| |||| ||||||||||||||| |||||||||||||||||||||||  || |||||||||||||    
T  20354641 aataccgagtttgatttccagggagaacaacgcttggctagtgcgcatgcctctacgcatgagtcggattagtcgtccac 20354720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 40272451 - 40272340
Alignment:
Q  16 gatgtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgat 115  Q
    ||||||||||||||||| || |||| |||| || |  |||||||||||||||||||||||||||||||||||| |  || ||| ||||| |||| ||| |    
T  40272451 gatgtatccggggaatatcgggttcgatttccatggggaacaacgcttggccagtgcgcatgcctctacgcataagtcggatttgtcgttcaccattggt 40272352  T
Q  116 ggatcggaaacc 127  Q
    || |||||||||    
T  40272351 gggtcggaaacc 40272340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 6032753 - 6032652
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    ||||||||||||| ||||||||||||||| |    ||||||| ||||||| |||||||||||| |||| ||| |||||||||| ||||||| ||| ||||    
T  6032753 ccggggaataccgggttcaattttcaggagg---tacgcttgaccagtgctcatgcctctacgaatgagccggattagtcgtctacctttggtgggtcgg 6032657  T
Q  123 aaacc 127  Q
    |||||    
T  6032656 aaacc 6032652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 16450328 - 16450402
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||||||||||||||| ||||||||||||||||| ||  |||||||||||||||||| | | |||||||||    
T  16450328 gaacaacgcttggccagtgcacatgcctctacgcatgagccagattagtcgtccacctttggtaggtcggaaacc 16450402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 26480060 - 26479958
Alignment:
Q  25 ggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaa 124  Q
    |||||||||||||||| ||| | | |  ||| ||| |||||||||| ||||||||||||||||||| |||||||| ||||||| | |||||| |||||||    
T  26480060 ggggaataccgagttcgattcttaaggggaataacacttggccagtacgcatgcctctacgcatgagccgaattaatcgtccatcattgatgaatcggaa 26479961  T
Q  125 acc 127  Q
    |||    
T  26479960 acc 26479958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 30317261 - 30317335
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||||||||||||| || ||||||||||||| || |||||||||||| ||||||||| ||| |||||||||    
T  30317261 gaacaacgcttggccagtacgaatgcctctacgcacgagccgaattagtcgcccacctttggtgggtcggaaacc 30317335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 3507298 - 3507371
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaac 126  Q
    |||||||||||||| ||||||| ||||||||| || || ||| |||||||||||||||||| ||||||||||||    
T  3507298 gaacaacgcttggctagtgcgcgtgcctctacacacgagccggattagtcgtccacctttggtggatcggaaac 3507371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 3574556 - 3574495
Alignment:
Q  26 gggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgca 87  Q
    |||||||||||||||||||  |||| |||||||| |||||||||||||||||||||||||||    
T  3574556 gggaataccgagttcaattcccagggagaacaacacttggccagtgcgcatgcctctacgca 3574495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 20421768 - 20421876
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||| ||||||||| | |||| |||| ||||  ||||||| |||||||||||||||||||||||||||||| ||  |||| ||||||| | |||||||     
T  20421768 gtatctggggaatactg-gttcgatttccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccagattaatcgtccatcattgatggg 20421866  T
Q  119 tcggaaacca 128  Q
    ||||||||||    
T  20421867 tcggaaacca 20421876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 24166479 - 24166552
Alignment:
Q  54 aacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||| |||||||||||||||||||||||||| || ||  |||||||  |||||||||||||||||||||||    
T  24166479 aacaacgtttggccagtgcgcatgcctctacgcacgagccagattagtcacccacctttgatggatcggaaacc 24166552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 128
Target Start/End: Original strand, 47078456 - 47078561
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    ||||||||||||| |||| |||  ||||  |||||||||||||||||||| |||||||||||||| || ||| ||||||||  |||| ||| ||| ||||    
T  47078456 ccggggaataccgggttcgattcccagggggaacaacgcttggccagtgcacatgcctctacgcacgagccggattagtcgctcaccattggtgggtcgg 47078555  T
Q  123 aaacca 128  Q
    ||||||    
T  47078556 aaacca 47078561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 3159586 - 3159478
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    |||||||| |||||||| |||| | || ||||  ||||||||||||||||||||||||||||||||||| || ||  ||||||||  |||| ||| |||     
T  3159586 gtatccggagaataccgggttcgacttccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccagattagtcgctcaccattggtggg 3159487  T
Q  119 tcggaaacc 127  Q
    |||||||||    
T  3159486 tcggaaacc 3159478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 6779214 - 6779310
Alignment:
Q  28 gaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaa 124  Q
    |||||||| |||| |||  ||||  ||||||| | ||||||||||||||||||||| |||||| ||| |||||||||||||||||| || |||||||    
T  6779214 gaataccgggttcgattcccagggggaacaacacctggccagtgcgcatgcctctatgcatgagccggattagtcgtccacctttggtgaatcggaa 6779310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 46108719 - 46108793
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||  ||||| ||||||||||||||||||||||| ||  ||||||||||||| |||||||| |||||||||    
T  46108719 gaacaacatttggctagtgcgcatgcctctacgcatgagccagattagtcgtccacttttgatgggtcggaaacc 46108793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 48015156 - 48015082
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||||||||||||||||||| ||||||||||| || ||| |||||| | |||  ||||||||||||||||||    
T  48015156 gaacaacgcttggccagtgcgcaagcctctacgcacgagccggattagtagcccaattttgatggatcggaaacc 48015082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 128
Target Start/End: Complemental strand, 48317369 - 48317283
Alignment:
Q  42 attttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacca 128  Q
    |||||||||| ||||||||||||| ||||| | ||||||||||||| || ||| |||||||| ||||| ||||||| | ||||||||    
T  48317369 attttcaggaggaacaacgcttggtcagtgtgtatgcctctacgcacgagccggattagtcgcccaccgttgatgggttggaaacca 48317283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 10541045 - 10541117
Alignment:
Q  54 aacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||||||||||||| ||||||||||||||| || ||  |||| ||| |||||||||||||||||||||||    
T  10541045 aacaacgcttggccagtgtgcatgcctctacgcacgagccagattaatcg-ccacctttgatggatcggaaacc 10541117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 295616 - 295560
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacc 109  Q
    |||||||| |||||||||||||||||||||||||| |||||  ||||||||||||||    
T  295616 gaacaacgtttggccagtgcgcatgcctctacgcacgaaccagattagtcgtccacc 295560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 20128303 - 20128411
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||||||||||||| | |||| ||| |||||  |||||| ||||||||||||||||||||| |||||| || |   |||||||||||||| ||| |||     
T  20128303 gtatccggggaatactgggttcgattctcagggggaacaatgcttggccagtgcgcatgcctttacgcacgagctagattagtcgtccaccattggtggg 20128402  T
Q  119 tcggaaacc 127  Q
    || ||||||    
T  20128403 tcagaaacc 20128411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 21429295 - 21429403
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||||| |||||| || |||| ||||| |||  |||||||| || ||||||||||||||||||||||| ||  |  | |||||||||||||||| |||     
T  21429295 gtatccgaggaatatcgggttcgatttttagggggaacaacgtttagccagtgcgcatgcctctacgcacgagtcagactagtcgtccacctttggtggg 21429394  T
Q  119 tcggaaacc 127  Q
    |||||||||    
T  21429395 tcggaaacc 21429403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 55921032 - 55921136
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    ||||||||||||| |||| |||  ||||  ||||||| ||||| ||||||||||||||||||| |||| ||| |||| |||  |||||||| ||| ||||    
T  55921032 ccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctctacgtatgagccggattaatcgctcacctttggtgggtcgg 55921131  T
Q  123 aaacc 127  Q
    |||||    
T  55921132 aaacc 55921136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 127
Target Start/End: Original strand, 13073541 - 13073640
Alignment:
Q  28 gaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||||||||| |||  || |  |||||| | ||||||||||||||| ||||||||||||||||  |||||||||  ||||||| ||| |||||||||    
T  13073541 gaataccgagttcgattcccatggggaacaatgtttggccagtgcgcatacctctacgcatgaaccagattagtcgtttacctttggtgggtcggaaacc 13073640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 27248422 - 27248514
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttg 113  Q
    ||||||||||||||||| |||| | |  ||||| ||||||||||||||||  ||||||||||||||||| || ||  |||||||| |||||||||    
T  27248422 gtatccggggaataccgggttcgagtcccaggaggaacaacgcttggcca--gcgcatgcctctacgcaggagccagattagtcgcccacctttg 27248514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 128
Target Start/End: Complemental strand, 36262850 - 36262775
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacca 128  Q
    |||||||||||||||||||| |||||||||||||| ||  || |||||||| ||||||||| ||| || |||||||    
T  36262850 gaacaacgcttggccagtgcacatgcctctacgcacgagtcggattagtcgcccacctttggtgggtcagaaacca 36262775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 37382539 - 37382622
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtc 102  Q
    |||||| | |||||||  |||||||||||||| ||||||||| ||||||| ||| |||||||||| ||| |||||| |||||||    
T  37382539 gtatccagtgaataccaggttcaattttcagggagaacaacgattggccaatgcacatgcctctatgcacgaaccggattagtc 37382622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 38168285 - 38168343
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccaccttt 112  Q
    |||||||||||||||||||| ||||||||||||||||| ||| ||||||||| |||||||    
T  38168285 gaacaacgcttggccagtgc-catgcctctacgcatgagccggattagtcgttcaccttt 38168343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 15840021 - 15839943
Alignment:
Q  50 gaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacca 128  Q
    |||||| |||| ||||||||||||||||||||||||||||| ||| |||||||| ||  ||||||| | | ||||||||    
T  15840021 gaagaataacgtttggccagtgcgcatgcctctacgcatgagccggattagtcgcccttctttgataggttggaaacca 15839943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 127
Target Start/End: Original strand, 31588722 - 31588788
Alignment:
Q  61 cttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||||||||||||| |||||||||||| ||| ||||||||  ||| |||| |||||||||||||    
T  31588722 cttggccagtgcgcatgtctctacgcatgagccggattagtcgctcacttttggtggatcggaaacc 31588788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 109
Target Start/End: Original strand, 43468345 - 43468431
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacc 109  Q
    ||||||||||||| |||| |||  ||||  |||||||||||||||||||| |||  |||||||||||| ||| |||||||| |||||    
T  43468345 ccggggaataccgggttcgattcccagggggaacaacgcttggccagtgcacatttctctacgcatgagccggattagtcgcccacc 43468431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 53354559 - 53354632
Alignment:
Q  52 agaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaa 125  Q
    |||||||| |||  ||||||||||||||||||||||| || || ||||||||| || ||||||||| |||||||    
T  53354559 agaacaacacttaaccagtgcgcatgcctctacgcataaatcggattagtcgttcatctttgatgggtcggaaa 53354632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 4649882 - 4649950
Alignment:
Q  173 ttaagtgtgtgtttggttctgcggtgataaaaattgatttcgatataattgattttgaatgaattgatt 241  Q
    ||||||||||||||||||||| |||||  | ||||||||| |||| |||||| ||||| ||||||||||    
T  4649882 ttaagtgtgtgtttggttctgtggtgagtagaattgattttgataaaattgagtttgagtgaattgatt 4649950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 7741954 - 7742026
Alignment:
Q  54 aacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaac 126  Q
    ||||||||||||||||||| |||||||||||||| || ||  |||||||||||| ||||| || |||| ||||    
T  7741954 aacaacgcttggccagtgcacatgcctctacgcacgatccagattagtcgtccatctttggtgaatcgaaaac 7742026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 109
Target Start/End: Complemental strand, 8064873 - 8064825
Alignment:
Q  61 cttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacc 109  Q
    |||| ||||||||||||||||||||||||| ||| ||||||||||||||    
T  8064873 cttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccacc 8064825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 14859308 - 14859392
Alignment:
Q  42 attttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaac 126  Q
    |||||||||| |||||| | ||| |||||||||||| ||||||||| || ||  ||||||| |||||||||||||  ||||||||    
T  14859308 attttcaggaggaacaatgtttgaccagtgcgcatgtctctacgcacgagccagattagtcatccacctttgatgtgtcggaaac 14859392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 15829693 - 15829801
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    |||||||| ||||| | ||||  |||||||||   | |||| |||||||||||||||||| |||| |||||| ||| ||||||| |||||| ||| ||||    
T  15829693 gtatccggagaatatccagtttgattttcaggggaatcaacacttggccagtgcgcatgcttctaggcatgagccggattagtcctccaccattggtgga 15829792  T
Q  119 tcggaaacc 127  Q
    || ||||||    
T  15829793 tcagaaacc 15829801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 24850743 - 24850636
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||||||| ||||||   ||||||| |||||  ||||||| |||| ||||||||||||||||||||||||| | | |||| || |||||| ||  ||||    
T  24850743 gtatccgggaaataccagattcaattatcaggg-gaacaacacttgaccagtgcgcatgcctctacgcatgagctggattattcatccaccattattgga 24850645  T
Q  119 tcggaaacc 127  Q
    |||||||||    
T  24850644 tcggaaacc 24850636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 36150720 - 36150665
Alignment:
Q  175 aagtgtgtgtttggttctgcggtgataaaaattgatttcgatataattgattttga 230  Q
    |||||||||||||||| ||||||||  | ||||||||| |||||||||||||||||    
T  36150720 aagtgtgtgtttggttgtgcggtgacgagaattgattttgatataattgattttga 36150665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 4736588 - 4736698
Alignment:
Q  16 gatgtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgat 115  Q
    |||||| ||| ||||||||| |||||||| ||||    ||||||| ||||||| || ||||||||||||| |  | |||||||||||| ||||| ||| |    
T  4736588 gatgtacccgaggaataccgggttcaattctcagtggaaacaacgtttggccaatgtgcatgcctctacgtacaagccgaattagtcgcccaccgttggt 4736687  T
Q  116 ggatcggaaac 126  Q
    || ||||||||    
T  4736688 gggtcggaaac 4736698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 229
Target Start/End: Complemental strand, 5025662 - 5025605
Alignment:
Q  172 attaagtgtgtgtttggttctgcggtgataaaaattgatttcgatataattgattttg 229  Q
    ||||||||||||||||||| ||||||||  ||||||||||| |||  |||||||||||    
T  5025662 attaagtgtgtgtttggttatgcggtgactaaaattgattttgattgaattgattttg 5025605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 1940857 - 1940786
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||||||||   ||||||||||||||||||| || ||| |||||||| ||||||||| ||| ||| |||||    
T  1940857 gaacaacgcttgg---gtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcgaaaacc 1940786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 7000523 - 7000567
Alignment:
Q  24 cggggaataccgagttcaattttcaggaagaacaacgcttggcca 68  Q
    ||||||||||||||||| |||  ||||||||||||||||||||||    
T  7000523 cggggaataccgagttcgattcccaggaagaacaacgcttggcca 7000567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 127
Target Start/End: Complemental strand, 12703654 - 12703554
Alignment:
Q  27 ggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaac 126  Q
    ||||||| |||||| |||| |||   |||||||||||| |||||| | ||| |||||||||| | ||| |||||||| ||| |||| | |||||||||||    
T  12703654 ggaatactgagttcgatttccagtgggaacaacgcttgaccagtgtgtatgtctctacgcataagccggattagtcgcccatctttaaaggatcggaaac 12703555  T
Q  127 c 127  Q
    |    
T  12703554 c 12703554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 48656241 - 48656321
Alignment:
Q  47 caggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||||||||||||| || |||| |||||||||  |||||| | | |||||| || |||| ||||||||||| |||||    
T  48656241 caggaagaacaacgcttgacctgtgcacatgcctctctgcatgagctggattagttgttcaccattgatggatcgaaaacc 48656321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 125
Target Start/End: Original strand, 14567276 - 14567339
Alignment:
Q  62 ttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaa 125  Q
    |||||||||||||||||||||||||| || ||| ||||||||  | |||||| ||| |||||||    
T  14567276 ttggccagtgcgcatgcctctacgcacgagccggattagtcgctcgcctttggtgggtcggaaa 14567339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 128
Target Start/End: Complemental strand, 24479091 - 24478992
Alignment:
Q  29 aataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacca 128  Q
    |||||||||||||||||| |||   ||||||||||| ||| | | || |||||||| || || ||| |||| ||| ||||| ||| ||||||||||||||    
T  24479091 aataccgagttcaatttttaggggaaacaacgcttgaccattacacacgcctctacacacgagccggattaatcgcccaccgttggtggatcggaaacca 24478992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 29588765 - 29588836
Alignment:
Q  54 aacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaa 125  Q
    ||||| ||||||| |||||||||||||||||||| || ||| ||||||  |||||| ||| ||| |||||||    
T  29588765 aacaaagcttggctagtgcgcatgcctctacgcacgagccggattagttatccaccattggtgggtcggaaa 29588836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 33109316 - 33109426
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacg--cttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatg 116  Q
    |||||||||| ||| || ||||||||  || |||||||||||  |||||||||| |||||| ||||||||| || ||| |||||| | ||| |  |||||    
T  33109316 gtatccgggggatatcgggttcaattcccatgaagaacaacgctcttggccagtacgcatgtctctacgcacgagccggattagttgcccatcaatgatg 33109415  T
Q  117 gatcggaaacc 127  Q
    |||| ||||||    
T  33109416 gatcagaaacc 33109426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 45721085 - 45721188
Alignment:
Q  24 cggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgga 123  Q
    |||||||||||| |||| |||||||||   || || | ||||||| ||||| ||||||||||||  |  || ||||||||||||||||| |||| | |||    
T  45721085 cggggaataccgggttccattttcaggggaaataatgtttggccactgcgcgtgcctctacgcacaagtcggattagtcgtccacctttaatgggttgga 45721184  T
Q  124 aacc 127  Q
    ||||    
T  45721185 aacc 45721188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 127
Target Start/End: Original strand, 50485970 - 50486045
Alignment:
Q  52 agaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||||| ||||||||  |||||||||||||||| || ||| |||||||| ||||| ||  ||| |||||||||    
T  50485970 agaacaacgattggccagaacgcatgcctctacgcacgagccggattagtcgcccaccattagtgggtcggaaacc 50486045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 54487187 - 54487242
Alignment:
Q  172 attaagtgtgtgtttggttctgcggtgataaaaattgatttcgatataattgattt 227  Q
    |||| |||||||||||||| |||| ||||||||||||| || |||| |||||||||    
T  54487187 attatgtgtgtgtttggttatgcgatgataaaaattgagtttgatagaattgattt 54487242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 126
Target Start/End: Original strand, 9548738 - 9548812
Alignment:
Q  52 agaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaac 126  Q
    ||||||||||||||  ||||||||||||||| | || ||||   ||||||||| |||| ||| ||||||||||||    
T  9548738 agaacaacgcttggttagtgcgcatgcctctgcacacgaactagattagtcgttcaccgttggtggatcggaaac 9548812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 230
Target Start/End: Complemental strand, 16493038 - 16492988
Alignment:
Q  180 tgtgtttggttctgcggtgataaaaattgatttcgatataattgattttga 230  Q
    ||||||||||||| |||||| |||||||||||| || |||||||| |||||    
T  16493038 tgtgtttggttcttcggtgaaaaaaattgattttgaaataattgagtttga 16492988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 18531547 - 18531621
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||| ||||| ||||||||||||||| | ||| |||||  |||| ||||||||||||  ||| |||||||||    
T  18531547 gaacaacacttggtcagtgcgcatgcctccatgcacgaaccagattattcgtccaccttttgtgggtcggaaacc 18531621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 229
Target Start/End: Complemental strand, 22699854 - 22699804
Alignment:
Q  179 gtgtgtttggttctgcggtgataaaaattgatttcgatataattgattttg 229  Q
    |||||||||||| |||||||| |||||||||||| | || |||||||||||    
T  22699854 gtgtgtttggttgtgcggtgaaaaaaattgattttggtagaattgattttg 22699804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 109
Target Start/End: Complemental strand, 42722499 - 42722406
Alignment:
Q  15 agatgtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacc 109  Q
    ||||||| ||||||||||||| |||  |||  ||||  ||||||| |||| ||||||||||| |||||| ||||||  || ||||||||||||||    
T  42722499 agatgtacccggggaataccgggtttgattcccaggg-gaacaacacttgaccagtgcgcatacctctatgcatgagtcggattagtcgtccacc 42722406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 229
Target Start/End: Complemental strand, 46958135 - 46958085
Alignment:
Q  179 gtgtgtttggttctgcggtgataaaaattgatttcgatataattgattttg 229  Q
    |||||||||||| |||||||  |||||||||||| |||| |||||||||||    
T  46958135 gtgtgtttggttgtgcggtggaaaaaattgattttgatagaattgattttg 46958085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 127
Target Start/End: Complemental strand, 47682461 - 47682391
Alignment:
Q  57 aacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||| ||||||||||| |||| ||||||||| || |||  ||||||| ||||||||| ||| |||||||||    
T  47682461 aacgtttggccagtgcacatgtctctacgcacgagccgggttagtcgcccacctttggtgggtcggaaacc 47682391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 49952228 - 49952154
Alignment:
Q  54 aacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcg-tccacctttgatggatcggaaacc 127  Q
    ||||||| |||| ||||||||| |||||||||||||| ||| ||||||||   |||||||||||| | |||||||    
T  49952228 aacaacgtttggtcagtgcgcacgcctctacgcatgagccggattagtcgcgtcacctttgatgggttggaaacc 49952154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 13552155 - 13552204
Alignment:
Q  78 cctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||||||||| ||| ||||||| |||||| ||||||||| |||||||    
T  13552155 cctctacgcatgagccggattagtcatccaccattgatggataggaaacc 13552204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 127
Target Start/End: Original strand, 54946286 - 54946351
Alignment:
Q  62 ttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||| |||| ||||||||||||||||||| ||| |||||||| ||| | ||| ||| |||||||||    
T  54946286 ttggtcagtccgcatgcctctacgcatgagccggattagtcgcccatcattggtgggtcggaaacc 54946351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 13167658 - 13167590
Alignment:
Q  173 ttaagtgtgtgtttggttctgcggtgataaaaattgatttcgatataattgattttgaatgaattgatt 241  Q
    |||||||||||||||||   |||||   |||||||||||| ||||||||||| |||||  |||||||||    
T  13167658 ttaagtgtgtgtttggtatggcggtaggaaaaattgattttgatataattgagtttgagagaattgatt 13167590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 20191656 - 20191711
Alignment:
Q  174 taagtgtgtgtttggttctgcggtgataaaaattgatttcgatataattgattttga 230  Q
    |||||||||||||| ||||||||||  |||||||||||| ||| ||| |||||||||    
T  20191656 taagtgtgtgtttgattctgcggtggcaaaaattgattttgatttaa-tgattttga 20191711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 127
Target Start/End: Complemental strand, 25406620 - 25406572
Alignment:
Q  79 ctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||||||||| |  ||||||||| |||||||||||| |||||||||    
T  25406620 ctctacgcatgaatcagattagtcgttcacctttgatgggtcggaaacc 25406572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 37194848 - 37194912
Alignment:
Q  63 tggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||||| ||||||||||||||||| ||| |||||| | ||  | ||||||| |||||||||    
T  37194848 tggccagtgcacatgcctctacgcatgagccggattagttgcccgtcattgatgggtcggaaacc 37194912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 41339478 - 41339422
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacc 109  Q
    ||||||||||||||||||| | ||||||||||||| ||  || |||||||| |||||    
T  41339478 gaacaacgcttggccagtgtgtatgcctctacgcacgagacggattagtcgcccacc 41339422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 43310153 - 43310089
Alignment:
Q  62 ttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaac 126  Q
    |||||||||||| |||||| |||||| ||   ||||||| ||||||||||| ||||||| |||||    
T  43310153 ttggccagtgcgtatgcctttacgcacgagttgaattagccgtccacctttaatggatcagaaac 43310089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 48352593 - 48352529
Alignment:
Q  52 agaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatg 116  Q
    ||||||||| ||||||||||| ||||||||  | || || ||| |||||||||||| ||||||||    
T  48352593 agaacaacgtttggccagtgcacatgcctcctcacacgagccggattagtcgtccatctttgatg 48352529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 212
Target Start/End: Original strand, 53158833 - 53158869
Alignment:
Q  176 agtgtgtgtttggttctgcggtgataaaaattgattt 212  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  53158833 agtgtgtgtttggttctgctgtgacaaaaattgattt 53158869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 1e-28; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 21898641 - 21898749
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||||||||||||||| |||| |||  ||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||  |||     
T  21898641 gtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtggg 21898740  T
Q  119 tcggaaacc 127  Q
    |||||||||    
T  21898741 tcggaaacc 21898749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 3588062 - 3587955
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    |||||||| |||||||| |||| |||  || |  |||||||||||||||||||| ||| ||||||||||||||||| |||||||||| ||||||||||||    
T  3588062 gtatccggagaataccgggttcgattcccaaggggaacaacgcttggccagtgcacatacctctacgcatgaaccggattagtcgtcaacctttgatgga 3587963  T
Q  119 tcggaaac 126  Q
    ||||||||    
T  3587962 tcggaaac 3587955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 6606214 - 6606106
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||||||||||||||| |||| ||| |||||  ||||||| |||||||||||  ||||||||||||||||| ||| |||||||||||||| ||| |||     
T  6606214 gtatccggggaataccgggttcgattctcagggggaacaacacttggccagtgtacatgcctctacgcatgagccggattagtcgtccaccattggtggg 6606115  T
Q  119 tcggaaacc 127  Q
    |||||||||    
T  6606114 tcggaaacc 6606106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 54 - 134
Target Start/End: Original strand, 8888910 - 8888990
Alignment:
Q  54 aacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaaccatgcgaa 134  Q
    ||||||| ||||||||||||||| |||||||||||||  || |||||||||||||||||||||||||| ||||||||||||    
T  8888910 aacaacgtttggccagtgcgcatacctctacgcatgagtcggattagtcgtccacctttgatggatcgaaaaccatgcgaa 8888990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 127
Target Start/End: Original strand, 8938705 - 8938812
Alignment:
Q  20 tatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggat 119  Q
    ||||||||||||||   |||| |||  ||||| ||||||| |||| |||||||||| || ||||||||||| |||||||||||||||||||||||||| |    
T  8938705 tatccggggaatacttggttcgattcccaggaggaacaacacttgaccagtgcgcaagcatctacgcatgagccgaattagtcgtccacctttgatgggt 8938804  T
Q  120 cggaaacc 127  Q
    ||||||||    
T  8938805 cggaaacc 8938812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 2271418 - 2271311
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    |||| |||||||||||| |||| ||| ||||  |||||||||||| ||||||||||||| ||||||||| || ||| ||||||||||||||||||||||     
T  2271418 gtattcggggaataccgggttcgattctcag--agaacaacgcttagccagtgcgcatgtctctacgcacgagccggattagtcgtccacctttgatggg 2271321  T
Q  119 tcggaaacca 128  Q
    || |||||||    
T  2271320 tcagaaacca 2271311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 3601077 - 3601185
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    |||| ||||||||||||  ||| ||| |||||  |||||||||||||||||||||||||||| ||| || || ||| |||||||||||||||||| |||     
T  3601077 gtattcggggaataccggtttcgattctcagggggaacaacgcttggccagtgcgcatgcctatacacacgagccggattagtcgtccacctttggtggg 3601176  T
Q  119 tcggaaacc 127  Q
    |||||||||    
T  3601177 tcggaaacc 3601185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 5253336 - 5253232
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    ||||||||||||| |||| |||  ||||  ||||||| |||||||||||||||||||||||||||||| ||| |||| ||| ||||||||| ||| ||||    
T  5253336 ccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattaatcgcccacctttggtgggtcgg 5253237  T
Q  123 aaacc 127  Q
    |||||    
T  5253236 aaacc 5253232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 13036121 - 13036013
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    |||| ||||||||| || |||| |||||||||  ||||||| |||||||||||||||||||||||||||||| ||  |||||||||||||  ||| |||     
T  13036121 gtattcggggaatatcgggttcgattttcagggggaacaacacttggccagtgcgcatgcctctacgcatgagccagattagtcgtccactattggtggg 13036022  T
Q  119 tcggaaacc 127  Q
    |||||||||    
T  13036021 tcggaaacc 13036013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 8932651 - 8932762
Alignment:
Q  16 gatgtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgat 115  Q
    ||||||||||||||||| || |||| |||  ||||  ||||||| |||||| ||||||||||||||||||||||| ||| |||| ||  |||||||||||    
T  8932651 gatgtatccggggaatatcgggttcgattcccagggggaacaacacttggctagtgcgcatgcctctacgcatgagccggattaatcacccacctttgat 8932750  T
Q  116 ggatcggaaacc 127  Q
    || |||||||||    
T  8932751 gggtcggaaacc 8932762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 8944117 - 8944228
Alignment:
Q  16 gatgtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgat 115  Q
    ||||||||||||||||| || |||| |||  ||||  ||||||| |||||| ||||||||||||||||||||||| ||| |||| ||  |||||||||||    
T  8944117 gatgtatccggggaatatcgggttcgattcccagggggaacaacacttggctagtgcgcatgcctctacgcatgagccggattaatcacccacctttgat 8944216  T
Q  116 ggatcggaaacc 127  Q
    || |||||||||    
T  8944217 gggtcggaaacc 8944228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 26 - 113
Target Start/End: Complemental strand, 29333248 - 29333162
Alignment:
Q  26 gggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttg 113  Q
    |||||||||| |||| |||| ||||  |||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  29333248 gggaataccgggttcgatttccaggg-gaacaacgtttggccagtgcgcatgcctctacgcatgagccgaatcagtcgtccacctttg 29333162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 29444878 - 29444775
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    |||||| |||||| |||| ||||  |||  |||||||||||||||||||||||||||||||||||||| ||| |||||| ||||| ||||| ||| ||||    
T  29444878 ccgggggataccgggttcgatttctagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagttgtccatctttggtgggtcgg 29444779  T
Q  123 aaac 126  Q
    ||||    
T  29444778 aaac 29444775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 25 - 128
Target Start/End: Complemental strand, 34954730 - 34954627
Alignment:
Q  25 ggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaa 124  Q
    ||||||||||  |||| ||| |||||  |||||||| ||||||||||| ||| ||||||||||||| ||  |||||||||||||||||||||| ||||||    
T  34954730 ggggaataccaggttcgattctcagggggaacaacgtttggccagtgcacatacctctacgcatgagccagattagtcgtccacctttgatgggtcggaa 34954631  T
Q  125 acca 128  Q
    ||||    
T  34954630 acca 34954627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 9633708 - 9633634
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||||||||||||||||||||||||||||||| || ||| |||||||| ||||||||| ||| |||||||||    
T  9633708 gaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaacc 9633634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 8612087 - 8611983
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    ||||||||||||| |||| |||   |||| |||||||||||| |||||| |||||| ||||||||||||||| |||||||| ||||||||| ||| || |    
T  8612087 ccggggaataccgggttcgattccgaggaggaacaacgcttgaccagtgtgcatgcttctacgcatgaaccggattagtcgcccacctttggtgggtcag 8611988  T
Q  123 aaacc 127  Q
    |||||    
T  8611987 aaacc 8611983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 12606423 - 12606517
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttg 113  Q
    ||||||||||||||||   ||| |||| ||||  |||||||| |||||||||||||||||||||||||| || ||| |||||||| |||||||||    
T  12606423 gtatccggggaataccagattcgatttccagggggaacaacgtttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttg 12606517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 14107475 - 14107391
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcg 103  Q
    |||| |||||||||||| |||| |||  ||||| |||||||||||| ||||||| ||||||||||||||||| ||| ||||||||    
T  14107475 gtattcggggaataccgggttcgattcccaggaggaacaacgcttgaccagtgcacatgcctctacgcatgagccggattagtcg 14107391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 30788971 - 30788862
Alignment:
Q  16 gatgtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgat 115  Q
    ||||||||||||||||| || |||  ||| ||| |  |||||||| |||||||||||||||||||||| ||| || ||| |||||||| ||||||||| |    
T  30788971 gatgtatccggggaatatcgggtttgattctcatg--gaacaacgtttggccagtgcgcatgcctctaggcacgagccggattagtcgcccacctttggt 30788874  T
Q  116 ggatcggaaacc 127  Q
    || |||||||||    
T  30788873 gggtcggaaacc 30788862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 19089525 - 19089599
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||| ||||||||||| ||||||||||||||| || ||| |||||||||| ||||||| ||| |||||||||    
T  19089525 gaacaacacttggccagtgagcatgcctctacgcacgagccggattagtcgtctacctttggtgggtcggaaacc 19089599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 5029828 - 5029917
Alignment:
Q  37 gttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaac 126  Q
    |||| ||| ||||| ||||||||| |||| ||||||||||||||||||||||||   | |||||||| ||| ||||||||| ||||||||    
T  5029828 gttcgattctcagggagaacaacgtttggtcagtgcgcatgcctctacgcatgagttggattagtcgcccatctttgatgggtcggaaac 5029917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 17114980 - 17114908
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaa 125  Q
    |||||||||||||||| ||  ||||||||||||||||| ||| |||||||| ||||||||||| | |||||||    
T  17114980 gaacaacgcttggccaatggacatgcctctacgcatgagccggattagtcgcccacctttgataggtcggaaa 17114908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 9179846 - 9179747
Alignment:
Q  26 gggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaa 125  Q
    |||||||||| |||| |||  ||||  ||||||| |||| |||||  |||| ||||||||||||| | | |||||||||||||||||| |||||||||||    
T  9179846 gggaataccgggttcgattcccagggggaacaacacttgaccagtatgcatacctctacgcatgagctggattagtcgtccacctttggtggatcggaaa 9179747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 15151459 - 15151526
Alignment:
Q  174 taagtgtgtgtttggttctgcggtgataaaaattgatttcgatataattgattttgaatgaattgatt 241  Q
    ||||||||||||||||||||||||||  | ||||||||| |||| |||||| ||||| ||||||||||    
T  15151459 taagtgtgtgtttggttctgcggtgagtagaattgattttgatagaattgagtttgagtgaattgatt 15151526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 127
Target Start/End: Complemental strand, 14783494 - 14783429
Alignment:
Q  62 ttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||| |||| |||||||||||||||||| ||| |||||||||||||| ||| ||| |||||||||    
T  14783494 ttggctagtgtgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaacc 14783429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 10311586 - 10311518
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgca 87  Q
    ||||||||||||||||| |||| ||  ||| |  ||||||||||||||||||||||||| |||||||||    
T  10311586 gtatccggggaataccgggttcgatcctcaaggggaacaacgcttggccagtgcgcatgtctctacgca 10311518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 127
Target Start/End: Original strand, 31129207 - 31129278
Alignment:
Q  56 caacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||||||| ||||||||||||||||||||||| ||  |||||| || |||||||| ||  |||||||||    
T  31129207 caacgcttggctagtgcgcatgcctctacgcatgagccagattagttgtgcacctttggtgagtcggaaacc 31129278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 127
Target Start/End: Original strand, 30410452 - 30410546
Alignment:
Q  33 ccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||| ||| |||||| ||||||| |||  ||||||||||||||||||||||||| | | |||| |||  || ||||| ||| |||||||||    
T  30410452 ccgagttcgattctcaggaggaacaacacttaaccagtgcgcatgcctctacgcatgagctggattaatcgctcatctttggtgggtcggaaacc 30410546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 32157250 - 32157176
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||| |||| ||||||||||| ||||||||||||| ||  ||||||| |||| ||||| |||||| ||||||    
T  32157250 gaacaacacttgaccagtgcgcatacctctacgcatgagccagattagtcatccatctttggtggatcagaaacc 32157176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 241
Target Start/End: Original strand, 5584005 - 5584070
Alignment:
Q  176 agtgtgtgtttggttctgcggtgataaaaattgatttcgatataattgattttgaatgaattgatt 241  Q
    |||||||||| |||||||||||||  | ||||||||| |||| ||||||||||||  |||||||||    
T  5584005 agtgtgtgttaggttctgcggtgacgagaattgattttgatagaattgattttgacagaattgatt 5584070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 127
Target Start/End: Complemental strand, 8149859 - 8149806
Alignment:
Q  74 catgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||||||||||| | |||||||||||||||||||||| ||| | |||||||    
T  8149859 catgcctctacgcattagccgaattagtcgtccacctttggtgggttggaaacc 8149806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 12635842 - 12635915
Alignment:
Q  54 aacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||||||||| ||||||||||||||||||||  | ||| |||||||| ||||  ||| ||| |||||||||    
T  12635842 aacaacgcttggctagtgcgcatgcctctacgcacaagccggattagtcgcccactattggtgggtcggaaacc 12635915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 13584533 - 13584455
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctct----acgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||| |||||||||||||||||||||    | |||||| ||| |||| ||||||||||||| ||| |||||||||    
T  13584533 gaacaacgtttggccagtgcgcatgcctctatgcatgcatgagccggattaatcgtccacctttggtgggtcggaaacc 13584455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 229
Target Start/End: Original strand, 3605705 - 3605761
Alignment:
Q  173 ttaagtgtgtgtttggttctgcggtgataaaaattgatttcgatataattgattttg 229  Q
    |||||||||||||||||| || ||||   ||||||||||| ||||||||||||||||    
T  3605705 ttaagtgtgtgtttggttgtgtggtggacaaaattgattttgatataattgattttg 3605761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 9366502 - 9366447
Alignment:
Q  57 aacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttg 113  Q
    ||||||||||||||||||||||||||||||| || ||| ||||| || |||||||||    
T  9366502 aacgcttggccagtgcgcatgcctctacgcacgagccggattagacg-ccacctttg 9366447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 13468926 - 13469034
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||||||||||||||  ||||||||   |||  |||||||| |||| |||||| |||||||||||||| || ||  |||||||| ||||| ||| |||     
T  13468926 gtatccggggaataccaggttcaattcctagggggaacaacgattggtcagtgcacatgcctctacgcacgagccagattagtcgcccaccattggtggg 13469025  T
Q  119 tcggaaacc 127  Q
    | |||||||    
T  13469026 ttggaaacc 13469034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 24671949 - 24671877
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaa 125  Q
    ||||||| |||| |||||| |||||||||||||||  | ||| |||||| |||| |||||||||| |||||||    
T  24671949 gaacaacacttgaccagtgtgcatgcctctacgcacaagccggattagtagtccgcctttgatggttcggaaa 24671877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 113
Target Start/End: Original strand, 13627267 - 13627334
Alignment:
Q  46 tcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttg 113  Q
    |||||||||| ||||||||| |||| |||||||||||||| |  || ||||||||||| | |||||||    
T  13627267 tcaggaagaagaacgcttggtcagttcgcatgcctctacgtacaaatcgaattagtcgcctacctttg 13627334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 33859426 - 33859367
Alignment:
Q  29 aataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcat 88  Q
    ||||||| |||| ||||| |||  |||||||| ||| |||||||||||||||||||||||    
T  33859426 aataccgggttcgatttttagggggaacaacgtttgcccagtgcgcatgcctctacgcat 33859367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 13391313 - 13391363
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcg 103  Q
    |||||| | |||||||||||||||||||||||||| || ||| ||||||||    
T  13391313 gaacaatgtttggccagtgcgcatgcctctacgcacgagccggattagtcg 13391363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 32048509 - 32048555
Alignment:
Q  94 gaattagtcgtccacctttgatggatcggaaacc-atgcgaatccat 139  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  32048509 gaattagtcgtcaacctttgatgggtcggaaaccgatgcgaatccat 32048555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 123
Target Start/End: Original strand, 11142631 - 11142700
Alignment:
Q  54 aacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgga 123  Q
    ||||||| ||| |||||||||||||||||||||||||  |  |||||| ||||| ||||| ||| |||||    
T  11142631 aacaacgtttgaccagtgcgcatgcctctacgcatgagtcagattagttgtccaactttggtgggtcgga 11142700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 128
Target Start/End: Original strand, 21872973 - 21873005
Alignment:
Q  96 attagtcgtccacctttgatggatcggaaacca 128  Q
    |||||||||||||||||||||| ||||||||||    
T  21872973 attagtcgtccacctttgatgggtcggaaacca 21873005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 33940004 - 33940112
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||||| ||||||| | |||  ||| |||||| ||||||  |||  ||| ||||||||||||||| || || ||| |||||||||||| |||||| ||     
T  33940004 gtatccgaggaatactgggtttgattctcaggaggaacaatacttaaccattgcgcatgcctctacacacgagccggattagtcgtccatctttgacggg 33940103  T
Q  119 tcggaaacc 127  Q
    ||| |||||    
T  33940104 tcgaaaacc 33940112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 3e-26; HSPs: 77)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 53649716 - 53649824
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    |||| |||||||||||| |||| ||| |||||  ||||||| |||||||||||||| || |||||||||||| ||| ||||||||| |||||||||||||    
T  53649716 gtattcggggaataccgggttcgattctcagggtgaacaacacttggccagtgcgcctgtctctacgcatgagccggattagtcgttcacctttgatgga 53649815  T
Q  119 tcggaaacc 127  Q
    |||||||||    
T  53649816 tcggaaacc 53649824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 47219168 - 47219241
Alignment:
Q  54 aacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||    
T  47219168 aacaacgcttggctagtgcgcatgcctctacgcatgagccggattagtcgtccacctttgatgggtcggaaacc 47219241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 29127908 - 29128016
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||| |||||||| || |||| |||| |||| |||||||| ||||| |||||||||||||||||||||||| ||| |||||||| ||||||||| |||     
T  29127908 gtatctggggaatatcgggttcgatttccagggagaacaacacttggtcagtgcgcatgcctctacgcatgagccggattagtcgcccacctttggtggg 29128007  T
Q  119 tcggaaacc 127  Q
    |||||||||    
T  29128008 tcggaaacc 29128016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 45877443 - 45877551
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||||||||||||||| |||| |||| ||||   |||||| |||||||||||| ||||||||||||||||| ||| ||||||||| |||| |||||||     
T  45877443 gtatccggggaataccgggttcgatttccaggggaaacaacacttggccagtgcacatgcctctacgcatgagccggattagtcgttcaccattgatggg 45877542  T
Q  119 tcggaaacc 127  Q
    |||||||||    
T  45877543 tcggaaacc 45877551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 127
Target Start/End: Original strand, 49198341 - 49198448
Alignment:
Q  20 tatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggat 119  Q
    |||||||||||||||| |||| |||   |||  ||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||| ||| |||||    
T  49198341 tatccggggaataccgggttcgattcctagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtggat 49198440  T
Q  120 cggaaacc 127  Q
    | ||||||    
T  49198441 cagaaacc 49198448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 127
Target Start/End: Complemental strand, 51060398 - 51060291
Alignment:
Q  20 tatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggat 119  Q
    ||||||||||||| || |||| ||| |||||  ||||||| ||||| |||||||||||||||||||||||||| | |||||||||||||| ||| ||| |    
T  51060398 tatccggggaatatcgggttcgattctcagggggaacaacacttggtcagtgcgcatgcctctacgcatgaactggattagtcgtccaccattggtgggt 51060299  T
Q  120 cggaaacc 127  Q
    ||||||||    
T  51060298 cggaaacc 51060291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 54261221 - 54261323
Alignment:
Q  25 ggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaa 124  Q
    ||||||||||| |||| |||   |||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||  ||| ||||||    
T  54261221 ggggaataccgggttcgattcctaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaa 54261320  T
Q  125 acc 127  Q
    |||    
T  54261321 acc 54261323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 48342043 - 48342116
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaac 126  Q
    |||||||||||||| ||||||||||||||||||||||||||  |||||||||||| ||||| ||||||||||||    
T  48342043 gaacaacgcttggctagtgcgcatgcctctacgcatgaaccagattagtcgtccatctttggtggatcggaaac 48342116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 6462401 - 6462485
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcg 103  Q
    ||||| ||||||||||| |||| |||  |||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  6462401 gtatctggggaataccgggttcgattcacagggagaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcg 6462485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 3755559 - 3755653
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttg 113  Q
    |||||||||||||||||| ||| |||  ||||| |||||||| ||| |||||||||||| |||||||||||| ||| |||||||||| |||||||    
T  3755559 gtatccggggaataccgacttcgattcccaggaggaacaacgtttgaccagtgcgcatgtctctacgcatgagccggattagtcgtctacctttg 3755653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 22909772 - 22909881
Alignment:
Q  18 tgtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgg 117  Q
    ||||||||| ||||| || |||| ||| |||| | |||||||||| ||| ||||||||| | ||||||||||| ||||||||||||| ||||||||||||    
T  22909772 tgtatccggagaatatcgggttcgattctcag-aggaacaacgctaggctagtgcgcatacttctacgcatgagccgaattagtcgtgcacctttgatgg 22909870  T
Q  118 atcggaaacca 128  Q
     ||||||||||    
T  22909871 gtcggaaacca 22909881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 174 - 252
Target Start/End: Original strand, 37698344 - 37698422
Alignment:
Q  174 taagtgtgtgtttggttctgcggtgataaaaattgatttcgatataattgattttgaatgaattgattcagatcaaaag 252  Q
    |||||||||||||| |||||| |||||||||||| |||| |||| |||||||| ||||||||||||||| |||||||||    
T  37698344 taagtgtgtgtttgtttctgctgtgataaaaattaattttgatagaattgattgtgaatgaattgattcggatcaaaag 37698422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 47471854 - 47471928
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||| ||||||| ||||||||||| ||||||||||| |||||||||||||||||||||| ||| |||||||||    
T  47471854 gaacaatgcttggctagtgcgcatgcttctacgcatgagccgaattagtcgtccacctttggtgggtcggaaacc 47471928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 124
Target Start/End: Complemental strand, 52364914 - 52364813
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    |||||||||||||||||| |||  ||| | |||||||||||| |||||||||||||||||||||| || | | |||| ||||| ||||||||||| ||||    
T  52364914 ccggggaataccgagttcgattcccagaaggaacaacgcttgaccagtgcgcatgcctctacgcacgagctggattaatcgtctacctttgatgggtcgg 52364815  T
Q  123 aa 124  Q
    ||    
T  52364814 aa 52364813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 3136807 - 3136704
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    |||||||||||||  ||| |||||||||  ||||||| ||||| ||||||||||||||||||||||||  || |||||||||||||||||| | | ||||    
T  3136807 ccggggaataccggattcgattttcaggg-gaacaacacttgggcagtgcgcatgcctctacgcatgagtcggattagtcgtccacctttggttggtcgg 3136709  T
Q  123 aaacc 127  Q
    |||||    
T  3136708 aaacc 3136704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 8164548 - 8164648
Alignment:
Q  25 ggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaa 124  Q
    ||||||||||| |||||||||  | |  |||||||||||||||||||||||||||| |||||| ||  || |||||||| ||||||||| ||||||||||    
T  8164548 ggggaataccgggttcaatttctaaggggaacaacgcttggccagtgcgcatgcctttacgcacgagtcggattagtcgcccacctttggtggatcggaa 8164647  T
Q  125 a 125  Q
    |    
T  8164648 a 8164648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 29135902 - 29136010
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    |||||||||||||||||  ||| |||  ||||  ||||||| |||||||||||||||||||||||||||||| ||| ||||||| |||||| ||| |||     
T  29135902 gtatccggggaataccggattcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcttccaccattggtggg 29136001  T
Q  119 tcggaaacc 127  Q
    | |||||||    
T  29136002 ttggaaacc 29136010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 8362571 - 8362674
Alignment:
Q  24 cggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgga 123  Q
    |||||||||||| ||||||||  |||    ||||||| ||||||||| ||||||||||||||||||| || ||||||||||||||||||  |||||| ||    
T  8362571 cggggaataccgggttcaattcccagtggaaacaacgtttggccagtccgcatgcctctacgcatgagccaaattagtcgtccacctttagtggatccga 8362670  T
Q  124 aacc 127  Q
    ||||    
T  8362671 aacc 8362674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 49082813 - 49082920
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    |||||||||||||||||||||| |||  |||| |||||||||||| |||||||||||||| ||||| || ||| |  |||||||  |||||||| |||||    
T  49082813 gtatccggggaataccgagttcgattcccagggagaacaacgcttagccagtgcgcatgcatctacacacgaatcagattagtcacccacctttaatgga 49082912  T
Q  119 tcggaaac 126  Q
    ||| ||||    
T  49082913 tcgaaaac 49082920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 30767368 - 30767258
Alignment:
Q  16 gatgtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgat 115  Q
    |||||| | |||||||| || |||| |||| ||||  ||||||| ||||||||||| ||||||||||||||| || ||| |||||||| ||||||||| |    
T  30767368 gatgtacctggggaatatcgggttcgatttccagggggaacaacacttggccagtgtgcatgcctctacgcacgagccggattagtcgcccacctttggt 30767269  T
Q  116 ggatcggaaac 126  Q
    || ||||||||    
T  30767268 gggtcggaaac 30767258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 34662431 - 34662329
Alignment:
Q  25 ggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaa 124  Q
    |||||||| || |||| |||||||||| ||| |||| |||| |||| |||||| ||||| |||||| |||||||||||||||||||||  ||||| ||||    
T  34662431 ggggaatatcgggttcgattttcaggaggaataacgtttggtcagtacgcatgtctctatgcatgagccgaattagtcgtccacctttagtggattggaa 34662332  T
Q  125 acc 127  Q
    |||    
T  34662331 acc 34662329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 35923707 - 35923633
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||| |||||||||||||||||||||| ||| ||  ||||||||||||||| ||||||||||||| |||||    
T  35923707 gaacaacgtttggccagtgcgcatgcctctaagcacgagtcgaattagtcgtccatctttgatggatcgaaaacc 35923633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 47749189 - 47749115
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||| ||||||||||||||||||||||||||| || |||||||||||| ||||||||| | | |||||||||    
T  47749189 gaacaactcttggccagtgcgcatgcctctacgcacgagccgaattagtcgcccacctttggtaggtcggaaacc 47749115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 127
Target Start/End: Original strand, 13893918 - 13894023
Alignment:
Q  22 tccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcg 121  Q
    |||||||||||||| |||  |||| ||||  ||||||||||||| || ||||||||||||||| || || ||| |||||||| ||||||||| |||||||    
T  13893918 tccggggaataccgggttggatttccagggggaacaacgcttggtcaatgcgcatgcctctacacacgagccggattagtcgcccacctttggtggatcg 13894017  T
Q  122 gaaacc 127  Q
     |||||    
T  13894018 aaaacc 13894023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 33251685 - 33251758
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaac 126  Q
    |||||||| |||||||||| |||||||||||||||||| ||| ||||||||||||| |||||||| ||| ||||    
T  33251685 gaacaacgtttggccagtgtgcatgcctctacgcatgagccggattagtcgtccacatttgatgggtcgaaaac 33251758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 10040550 - 10040653
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    |||||||||| || |||| ||| |||||  ||||||||||||||||||||||||||||||||||| || ||| | | |||||||||||||| ||| | ||    
T  10040550 ccggggaatatcgggttcgattctcaggg-gaacaacgcttggccagtgcgcatgcctctacgcacgagccggaatggtcgtccacctttggtgggttgg 10040648  T
Q  123 aaacc 127  Q
    |||||    
T  10040649 aaacc 10040653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 15320179 - 15320283
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    ||||||||||||| |||| ||||  |||| |||||| | |||||||||| ||||||||||||||| || ||| |||||||| ||||||||| ||| || |    
T  15320179 ccggggaataccgggttcgatttcgaggaggaacaatgattggccagtgtgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcag 15320278  T
Q  123 aaacc 127  Q
    |||||    
T  15320279 aaacc 15320283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 25294949 - 25295057
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||||||||||||||| |||  ||| || ||   |||||| ||||||||||||||||||||||| |||||| ||| |||||||||||||| ||| |||     
T  25294949 gtatccggggaataccgggtttgattctctggggaaacaacacttggccagtgcgcatgcctctatgcatgagccggattagtcgtccaccattggtggg 25295048  T
Q  119 tcggaaacc 127  Q
    | |||||||    
T  25295049 ttggaaacc 25295057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 54237437 - 54237545
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||||||| |||| || | || ||||||||| |||||||| ||||| ||||||||||| |||||||||||| ||| || ||||||||||| ||  |||     
T  54237437 gtatccgggaaatatcggggtcgattttcagggagaacaacacttggtcagtgcgcatgtctctacgcatgagccggataagtcgtccaccattagtggg 54237536  T
Q  119 tcggaaacc 127  Q
    |||||||||    
T  54237537 tcggaaacc 54237545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 128
Target Start/End: Complemental strand, 2029379 - 2029276
Alignment:
Q  25 ggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaa 124  Q
    |||||||| ||| ||| ||||||||||  ||||||||||||  ||| ||||||||||||||||||| | | |||||||| ||||| ||||||| ||| ||    
T  2029379 ggggaataacgaattcgattttcaggagaaacaacgcttggttagtacgcatgcctctacgcatgagctggattagtcgcccaccattgatgggtcgcaa 2029280  T
Q  125 acca 128  Q
    ||||    
T  2029279 acca 2029276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 26043812 - 26043895
Alignment:
Q  30 ataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttg 113  Q
    |||||| |||| |||  |||| |||||||| |||||||||||||||||||||||||||||| ||| ||||||||  ||||||||    
T  26043812 ataccgggttcgattcccagggagaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttg 26043895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 29762276 - 29762165
Alignment:
Q  16 gatgtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgat 115  Q
    ||||||| ||||||||| || || | ||| |||||   |||||| ||||||||||||||||||||||| |||||| | | |||||||||||||| ||| |    
T  29762276 gatgtattcggggaatatcgggtccgattctcaggggcaacaacacttggccagtgcgcatgcctctatgcatgagctggattagtcgtccaccattggt 29762177  T
Q  116 ggatcggaaacc 127  Q
    || |||||||||    
T  29762176 gggtcggaaacc 29762165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 3507617 - 3507543
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||| ||||||||||||||||||||||||||| || ||| ||||||||  |||||||| ||| |||||||||    
T  3507617 gaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgctcacctttggtgggtcggaaacc 3507543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 10855407 - 10855457
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcg 103  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  10855407 gaacaacgcttggccagtacgcatgcctctacgcacgaaccgaattagtcg 10855457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 109
Target Start/End: Complemental strand, 15795607 - 15795522
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacc 109  Q
    |||||||||||||||||| |||  ||||  ||||||||||||| ||||||||||||||||||||| || | |||||||||| |||||    
T  15795607 ccggggaataccgagttcgattcccaggg-gaacaacgcttggtcagtgcgcatgcctctacgcacgagctgaattagtcgcccacc 15795522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 35315979 - 35316053
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||| |||||||||||||||||||||||||||||| | | |||||||| |||| |||| ||| |||||||||    
T  35315979 gaacaacacttggccagtgcgcatgcctctacgcatgagctggattagtcgcccacttttggtgggtcggaaacc 35316053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 127
Target Start/End: Original strand, 19146973 - 19147058
Alignment:
Q  42 attttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||||| ||||||||||||||||||| | || |||||| ||| || | | |||||||||||||||||| ||| |||||||||    
T  19146973 attttcaggaggaacaacgcttggccagtgtgtatccctctatgcacgagctggattagtcgtccacctttggtgggtcggaaacc 19147058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 28572294 - 28572221
Alignment:
Q  54 aacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||||||||||||  ||||||||||||||| || ||| |||||||| ||||||||| ||| |||||||||    
T  28572294 aacaacgcttggccagtatgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaacc 28572221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 30045844 - 30045917
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaac 126  Q
    ||||||||||||||||||||||||| ||||||||| ||  |  |||||||||||||||||||||| ||| ||||    
T  30045844 gaacaacgcttggccagtgcgcatgtctctacgcacgagtctgattagtcgtccacctttgatgggtcgtaaac 30045917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 41630596 - 41630523
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaac 126  Q
    |||||||||||| ||||||||||||||||||| ||||| ||| |||||||| ||||||||| | | ||||||||    
T  41630596 gaacaacgcttgcccagtgcgcatgcctctacacatgagccggattagtcgcccacctttggttggtcggaaac 41630523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 49021274 - 49021213
Alignment:
Q  66 ccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||||||||||||||||||||| ||| |||||||||||||| ||| ||| |||||||||    
T  49021274 ccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaacc 49021213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 241
Target Start/End: Complemental strand, 52813360 - 52813295
Alignment:
Q  176 agtgtgtgtttggttctgcggtgataaaaattgatttcgatataattgattttgaatgaattgatt 241  Q
    ||||||||||||||||||||||||  ||||||||||| |||| |||||| ||||| ||||||||||    
T  52813360 agtgtgtgtttggttctgcggtgagtaaaattgattttgatagaattgagtttgagtgaattgatt 52813295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 7328837 - 7328940
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    ||||| ||||||| |||| |||  ||||  ||||||| |||||||||||||||||||| ||||||||| ||| |||||||| ||||||||| ||| |||     
T  7328837 ccgggaaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcct-tacgcatgagccggattagtcgcccacctttggtgggtcga 7328935  T
Q  123 aaacc 127  Q
    |||||    
T  7328936 aaacc 7328940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 42412892 - 42412808
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcg 103  Q
    ||||||||||||||||| |||| |||  | ||  |||||||||||||| ||||| ||||||||||||||||| ||| ||||||||    
T  42412892 gtatccggggaataccgggttcgattcccggggggaacaacgcttggcaagtgcccatgcctctacgcatgagccggattagtcg 42412808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 127
Target Start/End: Original strand, 23511593 - 23511664
Alignment:
Q  56 caacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||| ||| |||||||||||||||||||||||||  || |||| ||||||||||||||||| ||| |||||    
T  23511593 caacgtttgaccagtgcgcatgcctctacgcatgagtcggattaatcgtccacctttgatgggtcgaaaacc 23511664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 26207922 - 26207835
Alignment:
Q  16 gatgtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcg 103  Q
    |||||| ||||||||||||| |||| |||  || |  |||||||||||| |||||| |||||||||||||||||| ||| ||||||||    
T  26207922 gatgtacccggggaataccgggttcgattcccacggggaacaacgcttgtccagtgtgcatgcctctacgcatgagccggattagtcg 26207835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 108
Target Start/End: Original strand, 39849094 - 39849149
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccac 108  Q
    ||||||||||||||||||| |||||||||||||||||| ||| |||||||| ||||    
T  39849094 gaacaacgcttggccagtgtgcatgcctctacgcatgagccggattagtcgcccac 39849149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 49543508 - 49543615
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    |||||| ||||||| || |||| ||| ||| |  |||||||| |||| ||||| ||||||||||||||| || |||||||||||| ||||||||  |||     
T  49543508 gtatcccgggaatatcgggttcgattctcatggggaacaacgtttggtcagtgtgcatgcctctacgcacgagccgaattagtcgcccacctttagtggg 49543607  T
Q  119 tcggaaac 126  Q
    ||||||||    
T  49543608 tcggaaac 49543615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 135
Target Start/End: Original strand, 4638178 - 4638260
Alignment:
Q  54 aacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc-atgcgaat 135  Q
    ||||||||||| ||||||||||| |||||||||| || ||| |||||| | |||||||| |||| ||||||||| ||||||||    
T  4638178 aacaacgcttgaccagtgcgcatacctctacgcacgagccggattagtagcccacctttaatgggtcggaaaccgatgcgaat 4638260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 26362051 - 26361977
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||| |||| ||||| ||||||||||||||| || ||| ||||||||  |||||||||||| |||||||||    
T  26362051 gaacaacgtttggtcagtgtgcatgcctctacgcacgagccggattagtcgcacacctttgatgggtcggaaacc 26361977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 127
Target Start/End: Original strand, 44064584 - 44064641
Alignment:
Q  70 tgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||||||||||||||||||||| ||||||||  |||||||| ||| |||||||||    
T  44064584 tgcgcatgcctctacgcatgaaccggattagtcgctcacctttggtgggtcggaaacc 44064641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 45402435 - 45402362
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaac 126  Q
    ||||||| || |||| |||||||||||||||||||||| ||| ||||||||| |||||||  ||| ||||||||    
T  45402435 gaacaacactcggcctgtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaac 45402362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 50405686 - 50405613
Alignment:
Q  54 aacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||||||| |||||||||||||||||||||| ||  || |||||||| ||||| ||| ||| |||||||||    
T  50405686 aacaacgcttgaccagtgcgcatgcctctacgcacgagtcggattagtcgcccaccattggtgggtcggaaacc 50405613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 51683072 - 51682963
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||||||||||||||  |||| |||  ||||  |||||||||||| ||||||||||||||||| | || || ||| |||||||| |||||  || |||     
T  51683072 gtatccggggaataccaggttcgattcccagggggaacaacgcttgaccagtgcgcatgcctctccacacgagccggattagtcgcccaccaatggtggg 51682973  T
Q  119 tcggaaacca 128  Q
    ||||||||||    
T  51682972 tcggaaacca 51682963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 3763073 - 3763140
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatc 120  Q
    ||||||||||||| ||||| ||||| ||||||||| |||| | |||||||||||||| ||||| ||||    
T  3763073 gaacaacgcttggtcagtgtgcatgtctctacgcacgaactggattagtcgtccaccattgatagatc 3763140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 24146411 - 24146340
Alignment:
Q  54 aacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaa 125  Q
    |||||| ||||| || | ||||||||||||  ||||| |||||||||||||||||| ||||||| |||||||    
T  24146411 aacaacacttggtcaatacgcatgcctctagacatgagccgaattagtcgtccaccattgatgggtcggaaa 24146340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 127
Target Start/End: Complemental strand, 40660416 - 40660337
Alignment:
Q  48 aggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||| |||||||  |||| |||||||||||||||||||||||||||| |||| || | |||||||| ||| ||| |||||    
T  40660416 aggaggaacaacatttggtcagtgcgcatgcctctacgcatgaaccggattaatcattcacctttggtgggtcgaaaacc 40660337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 113
Target Start/End: Complemental strand, 43330815 - 43330756
Alignment:
Q  54 aacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttg 113  Q
    |||||| |||| |||||||||||||||||||||| || ||| |||||||| |||||||||    
T  43330815 aacaacacttgaccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttg 43330756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 116
Target Start/End: Complemental strand, 45450531 - 45450468
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatg 116  Q
    |||||| ||||| ||||||||||||||||||||||| | |   |||||||||||||||||||||    
T  45450531 gaacaatgcttgaccagtgcgcatgcctctacgcataagctagattagtcgtccacctttgatg 45450468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 113
Target Start/End: Original strand, 7648753 - 7648823
Alignment:
Q  43 ttttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttg 113  Q
    ||||||||  |||||||| ||| ||||||||||| |||||||||| || ||| |||||||| |||||||||    
T  7648753 ttttcagggggaacaacgtttgaccagtgcgcatacctctacgcacgagccggattagtcgcccacctttg 7648823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 113
Target Start/End: Original strand, 31072871 - 31072961
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttg 113  Q
    |||| |||||||  |||| |||| ||||  ||||||||||||| |||||| |||||||||||||| || ||  |||| |||||||||||||    
T  31072871 ccggagaataccaggttcgatttccagggggaacaacgcttggtcagtgcacatgcctctacgcacgacccagattaatcgtccacctttg 31072961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 128
Target Start/End: Original strand, 41219588 - 41219690
Alignment:
Q  26 gggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaa 125  Q
    ||||||||| ||||| ||| |||||| |||||||| |||||||||||| |||||||| |||| || | | |||| ||   |||||||| ||||||| |||    
T  41219588 gggaataccaagttcgattctcaggaggaacaacgtttggccagtgcgtatgcctctgcgcacgagctggattaatcactcacctttggtggatcgtaaa 41219687  T
Q  126 cca 128  Q
    |||    
T  41219688 cca 41219690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 113
Target Start/End: Complemental strand, 47303579 - 47303513
Alignment:
Q  47 caggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttg 113  Q
    ||||| ||||||| ||||| |||||| ||||||||||| ||||| ||| |||||||||| |||||||    
T  47303579 caggaggaacaacacttggtcagtgcacatgcctctacacatgagccggattagtcgtcaacctttg 47303513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 55069763 - 55069689
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||| ||||||||||| |||||||||||||| || ||| |||| |||  |||||||| ||| |||||||||    
T  55069763 gaacaacgtttggccagtgcacatgcctctacgcacgagccggattaatcgctcacctttggtgggtcggaaacc 55069689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 21023171 - 21023224
Alignment:
Q  174 taagtgtgtgtttggttctgcggtgataaaaattgatttcgatataattgattt 227  Q
    ||||||||||||||||| || |||||||| ||||||||| |||| |||||||||    
T  21023171 taagtgtgtgtttggttgtgtggtgataataattgattttgatagaattgattt 21023224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 113
Target Start/End: Complemental strand, 32873634 - 32873573
Alignment:
Q  52 agaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttg 113  Q
    ||||||||||||| ||||||| |||||||||||| |||| ||  |||||||| |||||||||    
T  32873634 agaacaacgcttgaccagtgcacatgcctctacgtatgagccagattagtcgcccacctttg 32873573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 928623 - 928683
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttg 113  Q
    ||||||| |||| |||||||||||||| ||||||| || ||| ||||||| ||||||||||    
T  928623 gaacaacacttgaccagtgcgcatgccgctacgcacgagccggattagtcatccacctttg 928683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 37319972 - 37319900
Alignment:
Q  54 aacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaac 126  Q
    ||||||||||| | |||| ||||||||||||||| || | |||||| ||||||||| ||||||| | ||||||    
T  37319972 aacaacgcttgacaagtgtgcatgcctctacgcacgagctgaattaatcgtccaccgttgatgggttggaaac 37319900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 212
Target Start/End: Complemental strand, 51285760 - 51285720
Alignment:
Q  172 attaagtgtgtgtttggttctgcggtgataaaaattgattt 212  Q
    ||||||||||||||||||| |||||||| ||||||||||||    
T  51285760 attaagtgtgtgtttggttttgcggtgagaaaaattgattt 51285720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 112
Target Start/End: Original strand, 2668085 - 2668143
Alignment:
Q  54 aacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccaccttt 112  Q
    |||||| ||||||||||||||||||||||||||| || | | ||||||||  |||||||    
T  2668085 aacaacacttggccagtgcgcatgcctctacgcaagagctggattagtcgctcaccttt 2668143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 11687218 - 11687156
Alignment:
Q  28 gaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatga 90  Q
    |||||||| |||  ||| |||||  |||||| |||||||||||||||||||||||||| ||||    
T  11687218 gaataccgggtttgattctcagggggaacaatgcttggccagtgcgcatgcctctacgtatga 11687156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 127
Target Start/End: Complemental strand, 24506747 - 24506658
Alignment:
Q  37 gttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||| ||||||||| | ||||||||||| ||||||| |||||||||||||||||  |  ||||||||  |||| ||| ||| |||||||||    
T  24506747 gttcgattttcaggga-aacaacgcttgaccagtgcacatgcctctacgcatgagtcagattagtcgctcaccattggtgggtcggaaacc 24506658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 127
Target Start/End: Original strand, 33688982 - 33689048
Alignment:
Q  61 cttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||||||||||||||||||||||||| ||   |||||| |||||| ||| ||| | |||||||    
T  33688982 cttggccagtgcgcatgcctctacgcatgagccagtttagtcatccaccattggtgggttggaaacc 33689048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 10852688 - 10852737
Alignment:
Q  180 tgtgtttggttctgcggtgataaaaattgatttcgatataattgattttg 229  Q
    ||||||||||| |||||||  |||||||||||| | ||||||||||||||    
T  10852688 tgtgtttggttgtgcggtggaaaaaattgattttggtataattgattttg 10852737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 13367447 - 13367496
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtc 102  Q
    ||||||||||||| ||||| |||||||| ||||||||| ||| |||||||    
T  13367447 gaacaacgcttggtcagtgtgcatgcctttacgcatgagccggattagtc 13367496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 28242267 - 28242351
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcg 103  Q
    |||||||| |||||||| |||  |||  ||||| |||||| | ||||||||||| |||||||||| ||||||  || ||||||||    
T  28242267 gtatccggagaataccgggttagattgccaggaggaacaatgtttggccagtgcacatgcctctatgcatgaggcggattagtcg 28242351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 128
Target Start/End: Original strand, 32522045 - 32522077
Alignment:
Q  96 attagtcgtccacctttgatggatcggaaacca 128  Q
    |||||||||||||||||||||| ||||||||||    
T  32522045 attagtcgtccacctttgatgggtcggaaacca 32522077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 77)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 20525825 - 20525936
Alignment:
Q  16 gatgtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgat 115  Q
    ||||||||||||||||| || |||| |||  ||||  ||||||| ||| |||||||||||||||||||||||||| ||| |||||||||||||| ||| |    
T  20525825 gatgtatccggggaatatcgggttcgattcccaggtggaacaacacttcgccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggt 20525924  T
Q  116 ggatcggaaacc 127  Q
    ||||||||||||    
T  20525925 ggatcggaaacc 20525936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 28 - 126
Target Start/End: Original strand, 9805003 - 9805101
Alignment:
Q  28 gaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaac 126  Q
    |||||||| |||| |||  ||||  |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||| ||||||||    
T  9805003 gaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaac 9805101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 12081898 - 12081992
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttg 113  Q
    ||||||||||||||| | |||| ||| |||||  |||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||    
T  12081898 gtatccggggaatactgggttcgattctcagggggaacaacgcttggccagtgcgcatgcatctacgcacgagccgaattagtcgtccacctttg 12081992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 14588734 - 14588640
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttg 113  Q
    ||||| |||||||| || |||| |||||||||| ||| |||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  14588734 gtatctggggaatatcgggttcgattttcaggaggaataacgcttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttg 14588640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 42291588 - 42291514
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||||||||||||||| |||||||||||||| || ||| ||||||||||||||||||||||||||||||||    
T  42291588 gaacaacgcttggccagtgcacatgcctctacgcacgagccggattagtcgtccacctttgatggatcggaaacc 42291514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 176 - 252
Target Start/End: Original strand, 3747544 - 3747620
Alignment:
Q  176 agtgtgtgtttggttctgcggtgataaaaattgatttcgatataattgattttgaatgaattgattcagatcaaaag 252  Q
    ||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||||||||| |||||||||    
T  3747544 agtgtgtgtttggttatgcggtgataaaaattgattttgatagaattgattgtgaatgaattgattcggatcaaaag 3747620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 40117405 - 40117513
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    |||| ||||||||| ||| ||| |||| ||||  |||||||||||||||||||||||||||||||||||||| ||| |||| |||| |||||||| ||||    
T  40117405 gtattcggggaatatcgaattcgatttccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattaatcgttcacctttggtgga 40117504  T
Q  119 tcggaaacc 127  Q
    ||| |||||    
T  40117505 tcgaaaacc 40117513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 27 - 127
Target Start/End: Original strand, 42086325 - 42086425
Alignment:
Q  27 ggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaac 126  Q
    ||||||||| |||| |||  ||||  |||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||| ||| ||||||||    
T  42086325 ggaataccgggttcgattcccagggggaacaacgcttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaac 42086424  T
Q  127 c 127  Q
    |    
T  42086425 c 42086425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 15034062 - 15034173
Alignment:
Q  16 gatgtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgat 115  Q
    |||||| ||||||||||||| ||||||||| || |   |||||| ||||| ||||| |||||||||||||||||| ||  |||||| |||||||||||||    
T  15034062 gatgtacccggggaataccgggttcaatttccatgggaaacaacacttggtcagtgtgcatgcctctacgcatgagcctgattagttgtccacctttgat 15034161  T
Q  116 ggatcggaaacc 127  Q
    ||||||||||||    
T  15034162 ggatcggaaacc 15034173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 25 - 128
Target Start/End: Complemental strand, 38897829 - 38897727
Alignment:
Q  25 ggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaa 124  Q
    ||||||||||| |||| |||| ||||  ||||||||||||||||||||||||||||||||||| || ||| |||||| | ||||||||| ||||||||||    
T  38897829 ggggaataccgggttcgatttccaggg-gaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagttgcccacctttggtggatcggaa 38897731  T
Q  125 acca 128  Q
    ||||    
T  38897730 acca 38897727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 1538421 - 1538529
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    |||| |||||||||||| |||| |||  ||||  ||||||| |||||||||||||||||||||||||||||| ||| |||| ||||||||| ||| |||     
T  1538421 gtattcggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattaatcgtccaccattggtggg 1538520  T
Q  119 tcggaaacc 127  Q
    |||||||||    
T  1538521 tcggaaacc 1538529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 5732033 - 5731929
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    ||||||||||||| |||| |||  ||||| ||||||||||||||||||||||||||||||||| |||| ||  ||||||||| |||||||  ||| ||||    
T  5732033 ccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgtatgagccagattagtcgttcacctttagtgggtcgg 5731934  T
Q  123 aaacc 127  Q
    |||||    
T  5731933 aaacc 5731929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 9812866 - 9812970
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    ||||||||||||| |||| |||   |||| ||||||||||||||||||| |||||| ||||||||||||||| |||||||| ||||||||| ||| || |    
T  9812866 ccggggaataccgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcttctacgcatgaaccggattagtcgcccacctttggtgggtcag 9812965  T
Q  123 aaacc 127  Q
    |||||    
T  9812966 aaacc 9812970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 12766125 - 12766229
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    ||||||||||||| |||| ||| | |||| |||||| |||||||||||| |||||||||||||||||||||  |||||||| ||||||||| ||| || |    
T  12766125 ccggggaataccgggttcgattctgaggaggaacaatgcttggccagtgtgcatgcctctacgcatgaaccagattagtcgcccacctttggtgggtcag 12766224  T
Q  123 aaacc 127  Q
    |||||    
T  12766225 aaacc 12766229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 37263235 - 37263338
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    |||||||||| || |||| ||| |||||  |||||||||||||||| |||||||||||||||||| || ||| |||||||||||||||||  ||||||||    
T  37263235 ccggggaatatcgggttcgattctcaggg-gaacaacgcttggccaatgcgcatgcctctacgcacgagccggattagtcgtccacctttattggatcgg 37263333  T
Q  123 aaacc 127  Q
    |||||    
T  37263334 aaacc 37263338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 23383655 - 23383754
Alignment:
Q  27 ggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaac 126  Q
    ||||||||| |||| |||  ||||  |||||||||||||||||||||| ||||||||||||||| | | |||||||||||||||||| ||| ||||||||    
T  23383655 ggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcttgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaac 23383754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 18262731 - 18262633
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcg 121  Q
    ||||||||||||| |||| |||||||||  |||||||||||| ||||||||||| ||||||| || || ||| |||||||| |||||| ||||||||||    
T  18262731 ccggggaataccgggttctattttcagggggaacaacgcttgaccagtgcgcatacctctacacacgagccggattagtcgcccacctctgatggatcg 18262633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 9168369 - 9168277
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccaccttt 112  Q
    |||||||||||||||||||  | |||  ||| | |||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||    
T  9168369 gtatccggggaataccgagaacgattcccag-aggaacaacgcttggccagtgcgcatacctctacgcatgagccggattagtcgtccaccttt 9168277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 19572714 - 19572823
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||||||||||||||| |||  |||  ||||  ||||||| |||||||||||||||||||||||||||||| ||| ||||||||| |||| ||| |||     
T  19572714 gtatccggggaataccgggttagattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgttcaccattggtggg 19572813  T
Q  119 tcggaaacca 128  Q
    | ||||||||    
T  19572814 ttggaaacca 19572823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 12705008 - 12705112
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    ||||||||||||| |||| |||   |||| |||||||||||| |||||| |||||| ||||||||||||||| |||||||| ||||||||| ||| || |    
T  12705008 ccggggaataccgggttcgattccgaggaggaacaacgcttgaccagtgtgcatgcttctacgcatgaaccggattagtcgcccacctttggtgggtcag 12705107  T
Q  123 aaacc 127  Q
    |||||    
T  12705108 aaacc 12705112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 127
Target Start/End: Complemental strand, 3653998 - 3653923
Alignment:
Q  52 agaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||||||||| |||||||||||||||||||||| ||  || |||||||||||||||||| ||||||| |||||    
T  3653998 agaacaacgcttgaccagtgcgcatgcctctacgcacgaggcggattagtcgtccacctttggtggatcgaaaacc 3653923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 7866579 - 7866665
Alignment:
Q  27 ggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttg 113  Q
    ||||||||| |||| |||   |||| ||||||||||||||||||| ||||||||||||||| |||||| |||||||| |||||||||    
T  7866579 ggaataccgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcctctacgcacgaaccggattagtcgcccacctttg 7866665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 11845884 - 11845810
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||| ||| ||||||||||||| | |||||||    
T  11845884 gaacaacgtttggccagtgcgcatgcctctacgtatgagccgaattaatcgcccacctttgatgggttggaaacc 11845810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 39099862 - 39099788
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||| |||||||||||| ||||||||||||||||| ||| |||||||| ||||||||| ||| |||||||||    
T  39099862 gaacaacacttggccagtgcacatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaacc 39099788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 127
Target Start/End: Original strand, 14728109 - 14728181
Alignment:
Q  55 acaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||||||| |||||||||||||||||||||||| ||| |||||| |  |||||||||||| |||||||||    
T  14728109 acaacgcttggtcagtgcgcatgcctctacgcatgagccggattagttgctcacctttgatgggtcggaaacc 14728181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 20255386 - 20255466
Alignment:
Q  46 tcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaac 126  Q
    |||||| ||||||| |||| |||||||||||||||||||||||||  || |||||||||||||||||| ||  ||||||||    
T  20255386 tcaggacgaacaacacttgaccagtgcgcatgcctctacgcatgagtcggattagtcgtccacctttggtgagtcggaaac 20255466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 30349569 - 30349661
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctt 111  Q
    ||||||||||||||||| |||  ||||  |||  |||||| | |||||||||||||||||||||| |||||| | ||||||||||||||||||    
T  30349569 gtatccggggaataccgggtttgatttctagggggaacaatgattggccagtgcgcatgcctctatgcatgagctgaattagtcgtccacctt 30349661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 42861334 - 42861231
Alignment:
Q  20 tatccggggaataccgagttcaattttc-aggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||||||||||| || ||||||||| | ||| | |||||| |||||||||||||||||||||||||||||| ||| |||| ||||||||| ||| |||     
T  42861334 tatccggggaatatcgggttcaatttcccaggga-aacaacacttggccagtgcgcatgcctctacgcatgagccggattaatcgtccaccattggtggg 42861236  T
Q  119 tcgga 123  Q
    |||||    
T  42861235 tcgga 42861231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 120
Target Start/End: Complemental strand, 7308447 - 7308380
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatc 120  Q
    ||||||||||||| |||||| ||||||||||||||||| ||| ||||||||  |||||||||||||||    
T  7308447 gaacaacgcttgggcagtgcacatgcctctacgcatgagccggattagtcgctcacctttgatggatc 7308380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 128
Target Start/End: Original strand, 21375375 - 21375450
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacca 128  Q
    |||||||  ||| ||||||||||||| |||||||||||  || |||||||||||| ||||||||||||||||||||    
T  21375375 gaacaacatttgaccagtgcgcatgcttctacgcatgagtcggattagtcgtccatctttgatggatcggaaacca 21375450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 20590023 - 20590097
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||||||||||||||||||||| |||||||||||| ||| |||||| ||||||  |||  ||||||||||||    
T  20590023 gaacaacgcttggccagtgcgcatgactctacgcatgagccgtattagttgtccactattggaggatcggaaacc 20590097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 8513544 - 8513617
Alignment:
Q  54 aacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||| ||||||||||||| |||||||||||||| || ||  |||||||||||||||||| ||| |||||||||    
T  8513544 aacaatgcttggccagtgcacatgcctctacgcacgagccagattagtcgtccacctttggtgggtcggaaacc 8513617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 24875368 - 24875441
Alignment:
Q  52 agaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaa 125  Q
    ||||||||| ||| |||||||||||| ||||||||| || ||| |||| ||||||||||||||||| |||||||    
T  24875368 agaacaacgtttgaccagtgcgcatgtctctacgcacgagccggattaatcgtccacctttgatgggtcggaaa 24875441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 35245122 - 35245017
Alignment:
Q  20 tatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggat 119  Q
    |||||| ||||||  |||||||||||||||   |||||||| ||| |||||| |||||| ||||||||||| ||  |||||| | ||||||||||||| |    
T  35245122 tatccgaggaatattgagttcaattttcagagggaacaacgtttgaccagtgtgcatgcttctacgcatgagcctgattagttgcccacctttgatggtt 35245023  T
Q  120 cggaaa 125  Q
    ||||||    
T  35245022 cggaaa 35245017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 14974407 - 14974347
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttg 113  Q
    |||||||  ||||||||||| ||||||||||||||||| ||| ||||||||||||||||||    
T  14974407 gaacaacatttggccagtgcacatgcctctacgcatgagccggattagtcgtccacctttg 14974347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 128
Target Start/End: Complemental strand, 18294591 - 18294492
Alignment:
Q  28 gaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||| ||||||| | ||||  ||||||||||||| |||||||||| ||||||| ||||||||| |||| ||| ||| ||||| ||| |||||||||    
T  18294591 gaataccgggttcaatatccaggg-gaacaacgcttggtcagtgcgcatacctctacacatgaaccggattaatcgcccatctttggtgggtcggaaacc 18294493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 24653928 - 24653821
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||||||||||||  | |||| ||||||||| |||||||| ||||| |||||||||| ||||||||||| | ||| |||| ||||||||| ||| |||     
T  24653928 gtatccggggaatatagggttcgattttcagggagaacaacacttggtcagtgcgcatacctctacgcat-agccggattaatcgtccaccattggtggg 24653830  T
Q  119 tcggaaacc 127  Q
    ||| |||||    
T  24653829 tcgaaaacc 24653821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 43399142 - 43399226
Alignment:
Q  43 ttttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||||  ||| ||||||||||||||||||||||||||||||| || | | ||||||||||||| |||| | | |||||||||    
T  43399142 ttttcagggggaataacgcttggccagtgcgcatgcctctacgcacgagcaggattagtcgtccacatttggttggtcggaaacc 43399226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 14152037 - 14152148
Alignment:
Q  16 gatgtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgat 115  Q
    |||||| | ||||||||||| |||| ||| |||    ||||||||||||||||||| |||||| ||||  ||||| ||| |||| ||||||||| |||||    
T  14152037 gatgtacctggggaataccgggttcgattctcatagggaacaacgcttggccagtgtgcatgcttctatccatgagccggattaatcgtccaccattgat 14152136  T
Q  116 ggatcggaaacc 127  Q
    |||||| |||||    
T  14152137 ggatcgaaaacc 14152148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 112
Target Start/End: Complemental strand, 20682700 - 20682641
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccaccttt 112  Q
    ||||||||||||||||||||||||||||||||||| || ||| |||| ||| ||||||||    
T  20682700 gaacaacgcttggccagtgcgcatgcctctacgcacgagccggattaatcgaccaccttt 20682641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 28857122 - 28857189
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatga 90  Q
    ||||||||||||| |||| |||  ||||  ||||||| ||||||||||||||||||||||||||||||    
T  28857122 ccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatga 28857189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 41163572 - 41163470
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    ||||||||||||| |||| |||  ||||  |||||||| ||||||||||| |||| |||||||||||| | | |||||||||||||||||  ||| ||||    
T  41163572 ccggggaataccgggttcgattcccaggg-gaacaacgtttggccagtgcacatgtctctacgcatgagctggattagtcgtccaccttttgtgggtcgg 41163474  T
Q  123 aaac 126  Q
    ||||    
T  41163473 aaac 41163470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 20705572 - 20705622
Alignment:
Q  38 ttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcat 88  Q
    ||||||||||||| ||||||||| |||| ||||||||||||||||||||||    
T  20705572 ttcaattttcagggagaacaacgtttggtcagtgcgcatgcctctacgcat 20705622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 127
Target Start/End: Original strand, 21487615 - 21487712
Alignment:
Q  27 ggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaac 126  Q
    |||||| ||||||| |||||||||| |||||||| ||||| |||||||||||||||   || || ||| |||||||| |||||||| |||| ||| ||||    
T  21487615 ggaatatcgagttcgattttcaggaggaacaacgtttggctagtgcgcatgcctct---cacgagccggattagtcgcccacctttaatgggtcgaaaac 21487711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 102
Target Start/End: Complemental strand, 25417295 - 25417217
Alignment:
Q  24 cggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtc 102  Q
    |||||||||||| |||| |||  ||||  ||||||||||||||||||||||||||||||||| | || ||| |||||||    
T  25417295 cggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgaacgagccggattagtc 25417217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 35847838 - 35847908
Alignment:
Q  171 cattaagtgtgtgtttggttctgcggtgataaaaattgatttcgatataattgattttgaatgaattgatt 241  Q
    |||| ||||||||||||||||||||||||  | ||||||||| |||| |||||| ||||| ||||||||||    
T  35847838 catttagtgtgtgtttggttctgcggtgagtagaattgattttgatagaattgagtttgagtgaattgatt 35847908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 41800967 - 41801073
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||| |||||||| || |||| ||| ||| |  |||||||||||| ||| |||||||| ||||||||| || ||| ||||||||| || |||||||||     
T  41800967 gtatctggggaatatcgggttcgattctcaaggggaacaacgcttgaccaatgcgcatgtctctacgcacgagccggattagtcgttcatctttgatggg 41801066  T
Q  119 tcggaaa 125  Q
    |||||||    
T  41801067 tcggaaa 41801073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 127
Target Start/End: Original strand, 13664257 - 13664358
Alignment:
Q  26 gggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaa 125  Q
    ||||||||||  ||| ||| |||||  ||||||| |||||||||||||||||||||||||||||| ||  |||| |||  |||||||| ||  |||||||    
T  13664257 gggaataccggattcgattatcagggggaacaacacttggccagtgcgcatgcctctacgcatgagccagattaatcgatcacctttggtgtgtcggaaa 13664356  T
Q  126 cc 127  Q
    ||    
T  13664357 cc 13664358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 23247462 - 23247370
Alignment:
Q  25 ggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgg 117  Q
    |||||||| || |||| |||  ||||| ||||||||||||  ||||  ||||||||||||||| || ||  ||||||||||||||||||||||    
T  23247462 ggggaatatcgggttcgattcccaggaggaacaacgcttgatcagtatgcatgcctctacgcacgagccagattagtcgtccacctttgatgg 23247370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 18136397 - 18136285
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccg----aattagtcgtccacctttga 114  Q
    |||||||| |||||||| |||| |||  ||||  ||||||| ||||| ||||| |||||||||||| ||||| |||    ||||||||||||||| |||     
T  18136397 gtatccggagaataccgggttcgattcccagggggaacaacacttggtcagtgtgcatgcctctacacatgagccggattaattagtcgtccaccattgg 18136298  T
Q  115 tggatcggaaacc 127  Q
    ||| |||||||||    
T  18136297 tgggtcggaaacc 18136285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 84
Target Start/End: Original strand, 19839327 - 19839382
Alignment:
Q  29 aataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctac 84  Q
    |||||||  |||||||||||||| ||||||||||||  ||||||||||||||||||    
T  19839327 aataccggattcaattttcaggaggaacaacgcttgatcagtgcgcatgcctctac 19839382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 112
Target Start/End: Complemental strand, 24463969 - 24463910
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccaccttt 112  Q
    |||||||| |||||||||||||||||||||| ||| || ||| |||||||| ||||||||    
T  24463969 gaacaacgattggccagtgcgcatgcctctatgcacgagccggattagtcgcccaccttt 24463910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 1898988 - 1899050
Alignment:
Q  16 gatgtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgc 78  Q
    |||||| ||||||||||||| |||| |||  ||||  ||||||||||||||||||||||||||    
T  1898988 gatgtacccggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgc 1899050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 2485220 - 2485294
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||| || |||| ||||||||||||||||| ||||  || ||||||||  |||||||||||| |||||||||    
T  2485220 gaacaaccctgggcctgtgcgcatgcctctacgtatgagtcggattagtcgctcacctttgatgggtcggaaacc 2485294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 16755051 - 16755109
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatg 77  Q
    ||||||||||||||| | |||| ||||||||||  |||||| |||||||||||||||||    
T  16755051 gtatccggggaatactgggttcgattttcaggagaaacaacacttggccagtgcgcatg 16755109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 127
Target Start/End: Complemental strand, 27648488 - 27648434
Alignment:
Q  73 gcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||||||||| |||| ||| |||||||||||| ||||| |||||||||||||    
T  27648488 gcatgcctctacgtatgagccggattagtcgtccatctttggtggatcggaaacc 27648434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 127
Target Start/End: Original strand, 31890090 - 31890188
Alignment:
Q  29 aataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||| ||| ||||  |||| |||||||| ||| ||||||| ||||||||||  ||  | | ||||||||||||||||||| |||||||| |||||    
T  31890090 aataccgaattcgatttctaggaggaacaacgtttgaccagtgcacatgcctctatacacaagctgaattagtcgtccacctttaatggatcgaaaacc 31890188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 87
Target Start/End: Original strand, 25467423 - 25467468
Alignment:
Q  42 attttcaggaagaacaacgcttggccagtgcgcatgcctctacgca 87  Q
    |||||||||| |||||||| ||||||||| ||||||||||||||||    
T  25467423 attttcaggaggaacaacgattggccagtacgcatgcctctacgca 25467468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 32874811 - 32874884
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaac 126  Q
    |||||||||||| | ||||||||| ||| |||||| || |||||||| ||||||||| ||| ||| ||||||||    
T  32874811 gaacaacgcttgactagtgcgcatacctttacgcacgagccgaattaatcgtccaccattggtgggtcggaaac 32874884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 38369695 - 38369787
Alignment:
Q  24 cggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgg 117  Q
    ||||||||| || |||| ||| |||||  ||||||| ||||||||||||||||||||||||||| ||  || ||||||   |||||||||||||    
T  38369695 cggggaatatcgggttcgattctcaggg-gaacaacacttggccagtgcgcatgcctctacgcacgagtcggattagtaacccacctttgatgg 38369787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 7336610 - 7336710
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||||| |||||| || |||| ||||  | | ||||||||||||   ||||||||||||||||||||| || ||| |||| ||||| ||||||| ||||    
T  7336610 gtatccgaggaatatcgggttcgatttctaaggagaacaacgctttatcagtgcgcatgcctctacgcacgagccggattaatcgtctacctttggtgga 7336709  T
Q  119 t 119  Q
    |    
T  7336710 t 7336710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 18045629 - 18045736
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||||||||||||| | |||| |||  ||||  ||||||| |||||   || ||||||||||||| ||||| ||| |||| ||||||||||||  ||||    
T  18045629 gtatccggggaatactgggttcgattcccagggggaacaacccttggttggtacgcatgcctctacacatgagccg-attaatcgtccacctttagtgga 18045727  T
Q  119 tcggaaacc 127  Q
    |||||||||    
T  18045728 tcggaaacc 18045736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 128
Target Start/End: Complemental strand, 4016338 - 4016263
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacca 128  Q
    ||||||| |||||||||||||||||||||||| || || ||| |||||| |  |||| ||| ||| ||||||||||    
T  4016338 gaacaacacttggccagtgcgcatgcctctacacacgagccggattagttgctcaccattggtgggtcggaaacca 4016263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 115
Target Start/End: Original strand, 27484188 - 27484247
Alignment:
Q  56 caacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgat 115  Q
    |||| |||| |||||  |||||||||||||||||||||| ||||| |||||| |||||||    
T  27484188 caacacttgaccagtatgcatgcctctacgcatgaaccggattagacgtccatctttgat 27484247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 25452926 - 25452999
Alignment:
Q  29 aataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcg 103  Q
    ||||||||||| ||||||||||  |||||| | ||| |||||| ||||||||||||||| || ||| ||||||||    
T  25452926 aataccgagtttaattttcaggg-gaacaatgtttgaccagtgtgcatgcctctacgcacgagccggattagtcg 25452999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 87
Target Start/End: Original strand, 26077165 - 26077199
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgca 87  Q
    |||||||||||||||||||| ||||||||||||||    
T  26077165 gaacaacgcttggccagtgcacatgcctctacgca 26077199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 28862815 - 28862897
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagt 101  Q
    |||| ||||||||| |  |||| ||| |||||  |||||||||||||||| ||| |||||||||||||| || | ||||||||    
T  28862815 gtattcggggaatatcaggttcgattctcaggcggaacaacgcttggccaatgcacatgcctctacgcacgacctgaattagt 28862897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 30995145 - 30995195
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcg 103  Q
    ||||||| ||||||||| ||||||||||||||||| || ||| ||||||||    
T  30995145 gaacaacacttggccagggcgcatgcctctacgcacgagccggattagtcg 30995195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 114
Target Start/End: Complemental strand, 35813074 - 35813020
Alignment:
Q  60 gcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttga 114  Q
    ||||| |||||||||||| |||||| |||||  || |||||||||||||||||||    
T  35813074 gcttgaccagtgcgcatgtctctacacatgagtcggattagtcgtccacctttga 35813020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 20692958 - 20693031
Alignment:
Q  54 aacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||||||||||||| | |||||||||  ||||||  |  |||||| ||||||||||| ||| |||||||||    
T  20692958 aacaacgcttggccagtacacatgcctctgtgcatgattcagattagttgtccacctttggtgggtcggaaacc 20693031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 90
Target Start/End: Original strand, 22295248 - 22295277
Alignment:
Q  61 cttggccagtgcgcatgcctctacgcatga 90  Q
    ||||||||||||||||||||||||||||||    
T  22295248 cttggccagtgcgcatgcctctacgcatga 22295277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 28615274 - 28615335
Alignment:
Q  54 aacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgat 115  Q
    |||||||||||  || |||||| || |||||||| || |||||||||||||||||| |||||    
T  28615274 aacaacgcttgatcattgcgcacgcatctacgcacgagccgaattagtcgtccaccgttgat 28615335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 39728412 - 39728473
Alignment:
Q  54 aacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgat 115  Q
    |||||| ||||||||||| ||||||||||||||  ||  |||||||||||  ||||||||||    
T  39728412 aacaacacttggccagtgtgcatgcctctacgctcgagtcgaattagtcgctcacctttgat 39728473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 40060295 - 40060344
Alignment:
Q  28 gaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatg 77  Q
    |||||||| |||| |||||||||  ||||||| |||||||||||||||||    
T  40060295 gaataccgggttcgattttcagggggaacaacacttggccagtgcgcatg 40060344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 6764531 - 6764467
Alignment:
Q  62 ttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaac 126  Q
    ||||| |||||||||||||||||||| || ||| |||||||| | | ||||| ||| ||||||||    
T  6764531 ttggctagtgcgcatgcctctacgcacgagccggattagtcgcctatctttgttgggtcggaaac 6764467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 21149732 - 21149792
Alignment:
Q  27 ggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgca 87  Q
    ||||||||  |||| |||||||||  |||||||| ||| |||||||||||| |||||||||    
T  21149732 ggaataccaggttcgattttcagggggaacaacgtttgaccagtgcgcatgactctacgca 21149792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 35561935 - 35561851
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcg 103  Q
    |||||||||||||| ||||||| | || |||   ||||||| | || ||||||||||||||||||| ||||| ||  ||||||||    
T  35561935 gtatccggggaatatcgagttcgacttccagagggaacaacacctgaccagtgcgcatgcctctacacatgagccagattagtcg 35561851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 6100465 - 6100558
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccaccttt 112  Q
    ||||||||||||||||| |||| |||  ||||| ||||||||||||||||||||||||||| |||||||||| ||| ||||||||| |||||||    
T  6100465 gtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgccactacgcatgagccggattagtcgttcaccttt 6100558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 8141095 - 8141203
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    |||| |||||||||||| |||| |||| ||||   ||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||| |||     
T  8141095 gtattcggggaataccgggttcgatttccaggggaaacaacgcttggccagtgcgcatgcctctacgcatgagctgaattagtcgtccacatttggtggg 8141194  T
Q  119 tcggaaacc 127  Q
    || ||||||    
T  8141195 tcagaaacc 8141203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 10927603 - 10927707
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    ||||||||||||| |||| |||   |||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||  ||| ||||    
T  10927603 ccggggaataccgggttcgattcctaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcgg 10927702  T
Q  123 aaacc 127  Q
    |||||    
T  10927703 aaacc 10927707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 18373999 - 18374111
Alignment:
Q  15 agatgtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttga 114  Q
    |||| |||||||| ||||||  |||| ||| ||||| ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||| |||||     
T  18373999 agatatatccgggaaataccaggttcgattctcagggagaacaacgcttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccaactttgg 18374098  T
Q  115 tggatcggaaacc 127  Q
    ||| ||| |||||    
T  18374099 tgggtcgaaaacc 18374111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 176 - 252
Target Start/End: Original strand, 24297548 - 24297624
Alignment:
Q  176 agtgtgtgtttggttctgcggtgataaaaattgatttcgatataattgattttgaatgaattgattcagatcaaaag 252  Q
    |||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||  ||||||||    
T  24297548 agtgtgtgtttggttctgcggtgataaaaattaattttgatagaattgattttgaatgaattgattcgaatcaaaag 24297624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 177 - 252
Target Start/End: Original strand, 3619026 - 3619101
Alignment:
Q  177 gtgtgtgtttggttctgcggtgataaaaattgatttcgatataattgattttgaatgaattgattcagatcaaaag 252  Q
    ||||||||||||||| ||||| |||||||||||||| |||| |||||||||||||||||||||||| |||||||||    
T  3619026 gtgtgtgtttggttccgcggtcataaaaattgattttgatagaattgattttgaatgaattgattctgatcaaaag 3619101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 4479379 - 4479305
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||| ||| |||||||||    
T  4479379 gaacaacgcttggccagtgcgcatgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaacc 4479305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 24938644 - 24938571
Alignment:
Q  54 aacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||| ||||| || ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  24938644 aacaacacttggtcaatgcgcatgcctctacgcatgaaccggattagtcatccacctttgatggatcggaaacc 24938571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 1013094 - 1012986
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||||||||||||||| |||| |||  ||||  |||||||||||||||||| | ||||||||||||||||| |||||||| |||| |||||||  ||||    
T  1013094 gtatccggggaataccgggttcgattcccagggggaacaacgcttggccagtacacatgcctctacgcatgagccgaattaatcgttcacctttagtgga 1012995  T
Q  119 tcggaaacc 127  Q
    ||| |||||    
T  1012994 tcgaaaacc 1012986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 242
Target Start/End: Original strand, 8130062 - 8130126
Alignment:
Q  178 tgtgtgtttggttctgcggtgataaaaattgatttcgatataattgattttgaatgaattgattc 242  Q
    ||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  8130062 tgtgtgtttagttctgcggtgataaaaattgattttgatagaattgattttgaatgaattgattc 8130126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 24837239 - 24837342
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    ||||||||||||| |||| |||  |||| ||||||||||||||||||||  |||||||||| ||| || | | |||||||||||||||||| ||||||||    
T  24837239 ccggggaataccgtgttcgattcccagggagaacaacgcttggccagtgttcatgcctctaagcacgagcaggattagtcgtccacctttggtggatcgg 24837338  T
Q  123 aaac 126  Q
    ||||    
T  24837339 aaac 24837342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 43027304 - 43027406
Alignment:
Q  25 ggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaa 124  Q
    ||||||||| | |||| |||  ||||| |||||||| ||| ||| ||||||||||||||||||||| ||| |||||||||||| ||||||||| ||||||    
T  43027304 ggggaatactgggttcgattcccaggaggaacaacgattgtccaatgcgcatgcctctacgcatgagccggattagtcgtccatctttgatgggtcggaa 43027403  T
Q  125 acc 127  Q
    |||    
T  43027404 acc 43027406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 2467235 - 2467146
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccac 108  Q
    ||||||||||||||||| |||| |||| ||||  ||||||| ||||||||||||||||| ||||| |||||| ||| |||||||||||||    
T  2467235 gtatccggggaataccgggttcgatttccagggggaacaactcttggccagtgcgcatgtctctatgcatgagccggattagtcgtccac 2467146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 127
Target Start/End: Original strand, 36662406 - 36662505
Alignment:
Q  27 ggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaac 126  Q
    |||||| || |||| |||||||||  ||||||  ||| ||||||||||||||||||||| |||||||| ||||||||||||| ||| |||||||||||||    
T  36662406 ggaatatcgggttcgattttcaggg-gaacaatacttagccagtgcgcatgcctctacgtatgaaccggattagtcgtccacttttaatggatcggaaac 36662504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 26570914 - 26571025
Alignment:
Q  16 gatgtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgat 115  Q
    |||||||| ||| |||| || ||||||||   |||  ||||||||||||||||||| | |||| ||||||||||| ||| ||||||||||||||||||||    
T  26570914 gatgtatctgggaaatatcgggttcaattcctagggggaacaacgcttggccagtgtgtatgcatctacgcatgagccggattagtcgtccacctttgat 26571013  T
Q  116 ggatcggaaacc 127  Q
    |  |||||||||    
T  26571014 gagtcggaaacc 26571025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 45521159 - 45521269
Alignment:
Q  16 gatgtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgat 115  Q
    |||||| ||||||||||||| |||| |||  ||||  ||||||| ||||  |||||||||||||||||||||||| ||| ||||||||  ||||||||||    
T  45521159 gatgtacccggggaataccgggttcgattcccaggg-gaacaacacttgatcagtgcgcatgcctctacgcatgagccggattagtcgctcacctttgat 45521257  T
Q  116 ggatcggaaacc 127  Q
    || |||||||||    
T  45521258 gggtcggaaacc 45521269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 583839 - 583905
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggat 119  Q
    |||||||||||| |||||||||||||||||||||||||  || |||||||| |||||||||||||||    
T  583839 gaacaacgcttgaccagtgcgcatgcctctacgcatgagtcggattagtcgcccacctttgatggat 583905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 9860106 - 9860004
Alignment:
Q  25 ggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaa 124  Q
    ||||||||||| |||| |||  ||||  ||||||| ||||||||||| |||||||||||| ||||| ||  |||||||||||||| ||| ||||||||||    
T  9860106 ggggaataccgggttcgattcccagggggaacaacacttggccagtgtgcatgcctctacacatgagccagattagtcgtccaccattggtggatcggaa 9860007  T
Q  125 acc 127  Q
    |||    
T  9860006 acc 9860004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 3418630 - 3418537
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccaccttt 112  Q
    ||||| |||||||| || |||| ||||| |||| ||||||| |||||||||||||||||| |||||||||||  |  |||||||||||||||||    
T  3418630 gtatctggggaatatcgggttcgatttttaggaggaacaacacttggccagtgcgcatgcgtctacgcatgagtcagattagtcgtccaccttt 3418537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 2964073 - 2964177
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    ||||||||||||| |||| |||   | || |||||||||||||||| || ||||||||||||||| |||||| |||||||| ||||||||| ||| || |    
T  2964073 ccggggaataccgtgttcgattccgatgaggaacaacgcttggccaatgtgcatgcctctacgcacgaaccggattagtcgcccacctttggtgggtcag 2964172  T
Q  123 aaacc 127  Q
    |||||    
T  2964173 aaacc 2964177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 112
Target Start/End: Complemental strand, 33401911 - 33401823
Alignment:
Q  24 cggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccaccttt 112  Q
    |||||||||||| |||| |||||||||  ||||||| |||| |||||| ||||||||||||||||||  || |||||||| ||||||||    
T  33401911 cggggaataccgggttcgattttcagggggaacaacacttgaccagtgtgcatgcctctacgcatgagtcggattagtcgcccaccttt 33401823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 44893391 - 44893287
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    ||||||||||||| |||||||||  |||  |||||| |||||||||||| ||||||||||||||| || ||| |||| |||  |||| ||||||| ||||    
T  44893391 ccggggaataccgggttcaatttctagggggaacaatgcttggccagtgtgcatgcctctacgcacgagccggattaatcgctcacccttgatgggtcgg 44893292  T
Q  123 aaacc 127  Q
    |||||    
T  44893291 aaacc 44893287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 10535520 - 10535427
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttg 113  Q
    ||||||| |||||||   ||||||||||||||  ||||| |||||| |||||||||||| ||| |||||||| ||||||||||||| ||||||||    
T  10535520 gtatccgaggaatacatggttcaattttcaggg-gaacaccgcttgaccagtgcgcatgtctccacgcatgagccgaattagtcgttcacctttg 10535427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 15884639 - 15884565
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||| |||||| |||||||||||||||||||| || ||| |||||||| ||||||||| ||| |||||||||    
T  15884639 gaacaacacttggcaagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaacc 15884565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 126
Target Start/End: Original strand, 23895594 - 23895668
Alignment:
Q  52 agaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaac 126  Q
    ||||||||||||||||||||||||| |||||||||| ||   | |||| ||||||||||||||||| ||||||||    
T  23895594 agaacaacgcttggccagtgcgcatacctctacgcacgagatggattaatcgtccacctttgatgggtcggaaac 23895668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 43032928 - 43033002
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||||||||||||||||||||||||||| || || ||| |||||||| ||||||||| ||| || ||||||    
T  43032928 gaacaacgcttggccagtgcgcatgcctctacacacgagccggattagtcgcccacctttggtgggtcagaaacc 43033002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 3465394 - 3465461
Alignment:
Q  174 taagtgtgtgtttggttctgcggtgataaaaattgatttcgatataattgattttgaatgaattgatt 241  Q
    ||||||||||||||||||||||||||  | ||||||||| |||| |||||| ||||| ||||||||||    
T  3465394 taagtgtgtgtttggttctgcggtgagtagaattgattttgatagaattgagtttgagtgaattgatt 3465461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 3567931 - 3568005
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||| |||| ||||||| ||| ||||||||||||| || |||||||| |||||||||| ||| |||||||||    
T  3567931 gaacaacacttgaccagtgcacatacctctacgcatgagccaaattagtcatccacctttggtgggtcggaaacc 3568005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 109
Target Start/End: Original strand, 6042818 - 6042904
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacc 109  Q
    ||||||||||||| |||| |||  || |  ||||||||||||||||||||||||||||  |||||||| ||| |||||||| |||||    
T  6042818 ccggggaataccgggttcgattcccaaggggaacaacgcttggccagtgcgcatgcctaaacgcatgagccggattagtcgcccacc 6042904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 14846573 - 14846674
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    ||||||||||||| |||| ||| |||||  |||||| | |||| ||||||||||||||||||||||||  |  || ||||||||||||||| ||| ||||    
T  14846573 ccggggaataccgggttcgattctcaggg-gaacaatgattggtcagtgcgcatgcctctacgcatgagtcagataagtcgtccacctttggtgggtcgg 14846671  T
Q  123 aaa 125  Q
    |||    
T  14846672 aaa 14846674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 14666188 - 14666120
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgca 87  Q
    ||||||||||||||||| |||| |||  ||||   |||||| |||||||||||||||||||||||||||    
T  14666188 gtatccggggaataccgggttcgattcccaggggaaacaacacttggccagtgcgcatgcctctacgca 14666120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 68210 - 68107
Alignment:
Q  24 cggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgga 123  Q
    ||||||| | || |||| ||| |||||| |||||||| |||||||||  |||||||| ||| || || ||| |||| |||| |||||||||||| |||||    
T  68210 cggggaagatcgggttcgattctcaggaggaacaacgtttggccagtatgcatgcctttacacacgagccggattaatcgttcacctttgatgggtcgga 68111  T
Q  124 aacc 127  Q
    ||||    
T  68110 aacc 68107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 11298350 - 11298276
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||| ||| ||||||||||||||||||| |||||| || ||||| |||  |||||||| ||| |||||||||    
T  11298350 gaacaacacttagccagtgcgcatgcctctatgcatgagccaaattaatcgctcacctttggtgggtcggaaacc 11298276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 111
Target Start/End: Original strand, 18091404 - 18091485
Alignment:
Q  29 aataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctt 111  Q
    |||||| | ||||||| |||| || ||||||| ||| |||||||||||||||||||||| ||  ||||||||||| |||||||    
T  18091404 aataccaaattcaattctcagaaa-aacaacgtttgaccagtgcgcatgcctctacgcacgaggcgaattagtcgcccacctt 18091485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 22958771 - 22958857
Alignment:
Q  27 ggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttg 113  Q
    |||||| ||| ||| ||||||||   |||||| |||||| ||||| ||||| ||||| |||||| ||| ||||||||||||||||||    
T  22958771 ggaatatcgaattcgattttcagagggaacaatgcttggtcagtgtgcatgtctctatgcatgagccggattagtcgtccacctttg 22958857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 90
Target Start/End: Complemental strand, 8587022 - 8586985
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatga 90  Q
    |||||||||||||||||||||||| |||||||||||||    
T  8587022 gaacaacgcttggccagtgcgcatacctctacgcatga 8586985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 20240570 - 20240631
Alignment:
Q  26 gggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgca 87  Q
    ||||||| ||||||| |||| |||||| || |||| |||| |||||||||||||||||||||    
T  20240570 gggaatatcgagttcgatttccaggaaaaataacgtttggtcagtgcgcatgcctctacgca 20240631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 20252497 - 20252436
Alignment:
Q  26 gggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgca 87  Q
    ||||||| ||||||| |||| |||||| || |||| |||| |||||||||||||||||||||    
T  20252497 gggaatatcgagttcgatttccaggaaaaataacgtttggtcagtgcgcatgcctctacgca 20252436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 3692864 - 3692920
Alignment:
Q  57 aacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttg 113  Q
    |||| |||| |||||||||| ||||||||||||| |||||||| |||| ||||||||    
T  3692864 aacgtttggtcagtgcgcatacctctacgcatgagccgaattaatcgttcacctttg 3692920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 87
Target Start/End: Original strand, 13359011 - 13359083
Alignment:
Q  15 agatgtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgca 87  Q
    |||||| |||||  ||||||| |||| ||| |||| | ||||||||||||| |||||||||| ||||||||||    
T  13359011 agatgtgtccggaaaataccgggttcgattctcagaaggaacaacgcttggacagtgcgcatacctctacgca 13359083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 16893930 - 16894036
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    |||||||||||||| || |||| |||  ||||  ||| |||||||||||||| | ||||||| ||||||||| ||| ||| |||| ||||||||| |||     
T  16893930 gtatccggggaatatcgggttcgattcacagggggaataacgcttggccagtacacatgcctttacgcatgagccggatt-gtcgcccacctttggtgg- 16894027  T
Q  119 tcggaaacc 127  Q
    |||||||||    
T  16894028 tcggaaacc 16894036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 121
Target Start/End: Complemental strand, 35496354 - 35496270
Alignment:
Q  37 gttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcg 121  Q
    |||||||||||||    |||||| ||||| ||||||||||||||||||| | || | | |||| ||| |||||||||||||||||    
T  35496354 gttcaattttcagaggaaacaacacttggtcagtgcgcatgcctctacgtacgagctggattaatcgcccacctttgatggatcg 35496270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 38922527 - 38922463
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgca 87  Q
    ||||||||||||| |||| |||  |||   |||||||||||||||||||||||||||| ||||||    
T  38922527 ccggggaataccgggttcgattcccagagggaacaacgcttggccagtgcgcatgcctttacgca 38922463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 127
Target Start/End: Original strand, 11785945 - 11786016
Alignment:
Q  56 caacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||| |||| ||||| |||||||||||||||||| ||  |||| |||  || |||||||||||||||||||    
T  11785945 caacgtttgggcagtgtgcatgcctctacgcatgagccagattaatcgctcatctttgatggatcggaaacc 11786016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 17981431 - 17981542
Alignment:
Q  16 gatgtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgat 115  Q
    |||||| ||||| ||||||| |||| |||  ||||  ||||||| |||| |||||| ||||||||||||||| ||  ||||||||| | ||| ||||| |    
T  17981431 gatgtacccgggaaataccgggttcgattcccagggggaacaactcttgaccagtgtgcatgcctctacgcacgagtcgaattagttgcccagctttggt 17981530  T
Q  116 ggatcggaaacc 127  Q
    |  |||||||||    
T  17981531 gagtcggaaacc 17981542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 103
Target Start/End: Complemental strand, 33935819 - 33935768
Alignment:
Q  52 agaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcg 103  Q
    |||||||| |||||||||||||||||||| |||||||||  || ||||||||    
T  33935819 agaacaacacttggccagtgcgcatgcctatacgcatgagtcggattagtcg 33935768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 2071539 - 2071593
Alignment:
Q  176 agtgtgtgtttggttctgcggtgataaaaattgatttcgatataattgattttga 230  Q
    ||||||||||||||||||||| ||| | ||||||||| || | ||||||||||||    
T  2071539 agtgtgtgtttggttctgcggcgatgagaattgattttgacagaattgattttga 2071593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 13358039 - 13357965
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||| ||||||| || ||||||||||| ||| || ||| ||||||||||| |||||  ||| |||||||||    
T  13358039 gaacaacgtttggccaatgtgcatgcctctatgcacgagccggattagtcgtccccctttagtgggtcggaaacc 13357965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 39219861 - 39219807
Alignment:
Q  174 taagtgtgtgtttggttctgcggtgataaaaattgatttcgatataattgatttt 228  Q
    ||||||||||||||||| |||||||  ||||||| |||| |||| ||||||||||    
T  39219861 taagtgtgtgtttggttgtgcggtggaaaaaattaattttgatagaattgatttt 39219807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 36779539 - 36779490
Alignment:
Q  180 tgtgtttggttctgcggtgataaaaattgatttcgatataattgattttg 229  Q
    ||||||||||| ||||||||  | ||||||||| ||||||||||||||||    
T  36779539 tgtgtttggttgtgcggtgacgagaattgattttgatataattgattttg 36779490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 6940551 - 6940658
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||||||  |||| || |||| |||| ||||  |||||||||||||| |||||||||  || ||| |||||  |||||||||| |||||||||| |||     
T  6940551 gtatccggaaaatatcgggttcgatttccaggtggaacaacgcttggctagtgcgcat-actttacacatgagtcgaattagtcatccacctttggtggg 6940649  T
Q  119 tcggaaacc 127  Q
    | |||||||    
T  6940650 taggaaacc 6940658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 13085517 - 13085585
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgca 87  Q
    ||||||||||||||||| |||| ||| ||||   |||||||| || ||||||| |||| ||||||||||    
T  13085517 gtatccggggaataccgggttcgattctcagagggaacaacgtttagccagtgtgcatacctctacgca 13085585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 21174167 - 21174215
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagt 101  Q
    ||||||||||||| ||||||||||| |||||||||| | ||| ||||||    
T  21174167 gaacaacgcttggtcagtgcgcatggctctacgcatcagccggattagt 21174215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 22552693 - 22552761
Alignment:
Q  173 ttaagtgtgtgtttggttctgcggtgataaaaattgatttcgatataattgattttgaatgaattgatt 241  Q
    |||||||| ||||||||| ||| ||||  | ||||||||| || |||||||||||| | ||||||||||    
T  22552693 ttaagtgtatgtttggttatgctgtgagtataattgattttgacataattgattttaattgaattgatt 22552761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 34613895 - 34613831
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctcta 83  Q
    |||||||||||||| || |||| |||  ||||| ||||||||  |||||||| ||||||||||||    
T  34613895 gtatccggggaatatcgggttcgattcccaggaggaacaacgtctggccagtacgcatgcctcta 34613831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 12666 - 12770
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    ||||||||||||| |||| |||   |||| ||||||||||||||||||| ||||||||||||||| |||||| |||||||| ||||||||||||| || |    
T  12666 ccggggaataccgggttcgattcagaggaggaacaacgcttggccagtgtgcatgcctctacgcacgaaccggattagtcgcccacctttgatgggtcag 12765  T
Q  123 aaacc 127  Q
    |||||    
T  12766 aaacc 12770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 9834 - 9946
Alignment:
Q  16 gatgtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgat 115  Q
    |||||||| | |||||||||  ||| |||| ||||  ||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||| |    
T  9834 gatgtatctgaggaataccggattcgatttccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggt 9933  T
Q  116 ggatcggaaacca 128  Q
    || || |||||||    
T  9934 gggtcagaaacca 9946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 7e-24; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 4195319 - 4195211
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    |||||||||||||||||||||| |||| ||||| |||||||  ||||| ||||||||||||||||||||||| ||| ||||| |||||||| ||| |||     
T  4195319 gtatccggggaataccgagttcgatttccaggaggaacaacatttggctagtgcgcatgcctctacgcatgagccggattagccgtccaccattggtggg 4195220  T
Q  119 tcggaaacc 127  Q
    | |||||||    
T  4195219 ttggaaacc 4195211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 10047993 - 10047885
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||||||||||||||| |||| |||  ||||  ||||||| ||||||||||||||| |||||||||||||| | |||||||||||||||| ||| |||     
T  10047993 gtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcaggcctctacgcatgagcagaattagtcgtccaccattggtggg 10047894  T
Q  119 tcggaaacc 127  Q
    |||||||||    
T  10047893 tcggaaacc 10047885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 17748499 - 17748391
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    |||| |||||||||||| |||| |||  ||||  ||||||||||||||||||||||||||||||||| | || ||| |||||||||||||||||| |||     
T  17748499 gtattcggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgtacgagccggattagtcgtccacctttgttggg 17748400  T
Q  119 tcggaaacc 127  Q
    |||||||||    
T  17748399 tcggaaacc 17748391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 38578980 - 38578876
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    |||||||||| || |||| |||  ||||  |||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||| ||| ||||    
T  38578980 ccggggaatatcgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcgg 38578881  T
Q  123 aaacc 127  Q
    |||||    
T  38578880 aaacc 38578876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 48804675 - 48804783
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||||||||||||||| |||| |||  || |  ||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||| ||| |||     
T  48804675 gtatccggggaataccgggttcgattcccaaggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtggg 48804774  T
Q  119 tcggaaacc 127  Q
    |||||||||    
T  48804775 tcggaaacc 48804783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 48551883 - 48551957
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||| ||||||| |||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||    
T  48551883 gaacaacggttggccaatgcgcatgcctctacgtatgagccggattagtcgtccacctttgatggatcggaaacc 48551957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 13095854 - 13095958
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    ||||||||||||| |||| |||  ||||  ||||||| |||||||||||||||||||||||||||||| ||| ||||||||  |||||||| ||| ||||    
T  13095854 ccggggaataccgggttctattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgggtcgg 13095953  T
Q  123 aaacc 127  Q
    |||||    
T  13095954 aaacc 13095958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 43862089 - 43861981
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||| ||||||||||| |||| |||  ||||  |||||||| ||||||||||||||||||||||||||||| ||| ||||||| | |||||||| ||||    
T  43862089 gtatctggggaataccgggttcgattcccagggggaacaacgtttggccagtgcgcatgcctctacgcatgagccggattagtcattcacctttggtgga 43861990  T
Q  119 tcggaaacc 127  Q
    ||| |||||    
T  43861989 tcgaaaacc 43861981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 22973964 - 22974067
Alignment:
Q  24 cggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgga 123  Q
    |||||||||||| |||| ||| |||||  ||||||||||||||||||| |||||| ||||||||||| ||  |||||||||||||||||| ||| || ||    
T  22973964 cggggaataccgggttcgattctcagggggaacaacgcttggccagtgtgcatgcgtctacgcatgagccagattagtcgtccacctttggtgggtcaga 22974063  T
Q  124 aacc 127  Q
    ||||    
T  22974064 aacc 22974067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 26 - 121
Target Start/End: Original strand, 30827291 - 30827386
Alignment:
Q  26 gggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcg 121  Q
    |||||||||  |||| ||||||||| |||||||| |||||||||| |||||||||||||||| || ||| |||||||||| |||||||| ||||||    
T  30827291 gggaataccaggttcgattttcagggagaacaacacttggccagtacgcatgcctctacgcacgagccggattagtcgtctacctttgacggatcg 30827386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 39420863 - 39420937
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||||||||||||||||| ||||||||||||||| ||| |||||||||| |||||||||||  ||||||||    
T  39420863 gaacaacgcttggccagtgcgcgtgcctctacgcatgagccggattagtcgtctacctttgatgggccggaaacc 39420937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 127
Target Start/End: Original strand, 3353459 - 3353524
Alignment:
Q  62 ttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||| ||||||    
T  3353459 ttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttgatggatcagaaacc 3353524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 1605937 - 1606041
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    |||| |||||||  |||| |||| ||||  |||||||||||||||||||| |||||||||| || ||| ||| |||||||| ||||||||| ||||||||    
T  1605937 ccggagaatacctggttcgatttccagggggaacaacgcttggccagtgcacatgcctctaggcttgagccggattagtcgcccacctttggtggatcgg 1606036  T
Q  123 aaacc 127  Q
    |||||    
T  1606037 aaacc 1606041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 1797452 - 1797560
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||||| ||||||||| |||| |||  ||||   |||||||||||||||||||||||| ||||||||| || ||| | |||||||||| ||||||||||    
T  1797452 gtatccgaggaataccgggttcgattcccaggggaaacaacgcttggccagtgcgcatgtctctacgcacgagccggactagtcgtccatctttgatgga 1797551  T
Q  119 tcggaaacc 127  Q
    ||| |||||    
T  1797552 tcgaaaacc 1797560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 5039539 - 5039427
Alignment:
Q  15 agatgtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttga 114  Q
    |||||||| ||||||||||||||||| |||   |||| ||||||| ||||| |||||| ||| ||||||||||||| ||| ||||||||  ||||||||     
T  5039539 agatgtattcggggaataccgagttcgattcctaggaggaacaacacttggtcagtgcacatacctctacgcatgagccggattagtcgctcacctttgg 5039440  T
Q  115 tggatcggaaacc 127  Q
    ||||||| |||||    
T  5039439 tggatcgaaaacc 5039427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 18785665 - 18785769
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    ||||||||||||| |||| |||   |||  ||||||| |||||||||||||||||||||||||||||||| | ||||||||| ||||| || ||| ||||    
T  18785665 ccggggaataccgggttcgattcctagggggaacaacacttggccagtgcgcatgcctctacgcatgaactggattagtcgttcacctctggtgggtcgg 18785764  T
Q  123 aaacc 127  Q
    |||||    
T  18785765 aaacc 18785769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 28396277 - 28396169
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||||||| |||| || |||||||| |||||  ||||||||||| ||  |||||||||||| ||||||||| ||| |||||||||| ||||||| |||     
T  28396277 gtatccgggaaatatcgggttcaattctcagggggaacaacgcttagctggtgcgcatgcctttacgcatgagccggattagtcgtctacctttggtggg 28396178  T
Q  119 tcggaaacc 127  Q
    |||||||||    
T  28396177 tcggaaacc 28396169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 183 - 251
Target Start/End: Original strand, 46285291 - 46285359
Alignment:
Q  183 gtttggttctgcggtgataaaaattgatttcgatataattgattttgaatgaattgattcagatcaaaa 251  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| ||||    
T  46285291 gtttggttatgcggtgataaaaattgattttgatataattgattttgaattaattgattctgattaaaa 46285359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 42032122 - 42032196
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||| ||||||||||| ||| | ||||||||||| |||||||||| ||||||||||||||| |||||||||    
T  42032122 gaacaacgtttggccagtgcacatacatctacgcatgagccgaattagttgtccacctttgatgggtcggaaacc 42032196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 34659215 - 34659308
Alignment:
Q  16 gatgtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacc 109  Q
    |||||| ||||||||||||| |||| ||| ||| |  |||||||||||| |||||||||||||||||||||| || ||| |||||||| |||||    
T  34659215 gatgtacccggggaataccgggttcgattctcaaggggaacaacgcttgaccagtgcgcatgcctctacgcacgagccggattagtcgcccacc 34659308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 45960085 - 45960012
Alignment:
Q  54 aacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||| ||||| |||||||||||||||||||||| | ||| ||||||||  ||||||||||||||||||||||    
T  45960085 aacaacacttggtcagtgcgcatgcctctacgcataagccggattagtcgctcacctttgatggatcggaaacc 45960012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 5069928 - 5069824
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    ||||| ||||||| |||| |||| ||||| ||||||||||| || |||| |||||||||||||||  | ||| |||||||| ||||||||| ||| ||||    
T  5069928 ccgggaaataccgggttcgatttccaggaggaacaacgcttagctagtgtgcatgcctctacgcacaagccggattagtcgcccacctttggtgggtcgg 5069829  T
Q  123 aaacc 127  Q
    |||||    
T  5069828 aaacc 5069824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 126
Target Start/End: Original strand, 14535290 - 14535390
Alignment:
Q  26 gggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaa 125  Q
    |||||||||| |||  ||||||||| |||||||| ||||||||||| ||||||||||||||| || | | |||||||| ||||| ||||||| || ||||    
T  14535290 gggaataccgggtttcattttcagggagaacaacacttggccagtgtgcatgcctctacgcacgagctggattagtcgcccaccattgatgggtcagaaa 14535389  T
Q  126 c 126  Q
    |    
T  14535390 c 14535390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 22993480 - 22993376
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    |||||||||| || |||| |||   |||| ||||||||||||||||||| ||||||||||||||| |||||| ||||||||  |||||||| ||| || |    
T  22993480 ccggggaatatcgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcctctacgcacgaaccggattagtcgctcacctttggtgggtcag 22993381  T
Q  123 aaacc 127  Q
    |||||    
T  22993380 aaacc 22993376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 127
Target Start/End: Original strand, 29151940 - 29152040
Alignment:
Q  27 ggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaac 126  Q
    ||||||||| |||| |||  |||||||||||||| ||| ||||||||||||||||||| || || ||| |||| ||||| ||| ||||||| ||||||||    
T  29151940 ggaataccgggttcgattcccaggaagaacaacgtttgaccagtgcgcatgcctctacacacgatccggattaatcgtctaccattgatgggtcggaaac 29152039  T
Q  127 c 127  Q
    |    
T  29152040 c 29152040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 41945503 - 41945559
Alignment:
Q  57 aacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttg 113  Q
    ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||    
T  41945503 aacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttg 41945559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 43925508 - 43925612
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    ||||||||||||| |||| |||  ||||  ||||||| ||||| |||||||||||||||||||||||| | | |||||| ||  |||||||||||||| |    
T  43925508 ccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctctacgcatgagctggattagttgtttacctttgatggatcag 43925607  T
Q  123 aaacc 127  Q
    |||||    
T  43925608 aaacc 43925612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 39474966 - 39475025
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccaccttt 112  Q
    ||||||||||||| |||||||||| ||||||||||||| ||| |||||||||||||||||    
T  39474966 gaacaacgcttggtcagtgcgcatacctctacgcatgagccggattagtcgtccaccttt 39475025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 47341872 - 47341974
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    |||||||||||||||||| |||  ||||  ||||||| ||||||||||||||||||||||||||| || | | ||| ||||| |||| ||| ||| ||||    
T  47341872 ccggggaataccgagttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcacgagcaggattggtcgttcaccattggtgggtcgg 47341971  T
Q  123 aaa 125  Q
    |||    
T  47341972 aaa 47341974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 127
Target Start/End: Original strand, 23658178 - 23658279
Alignment:
Q  26 gggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaa 125  Q
    ||||||| | ||||| |||| ||||  ||||||||||||||||||| |||||||||||| || || ||| |||||||||||| ||||| ||| || ||||    
T  23658178 gggaatatccagttcgatttccagggggaacaacgcttggccagtgtgcatgcctctacacacgagccggattagtcgtccatctttggtgggtcagaaa 23658277  T
Q  126 cc 127  Q
    ||    
T  23658278 cc 23658279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 43346896 - 43346787
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||| ||||||||||| |||||||| ||| |  ||||||| ||||||| ||||||||||||||||| | || ||| ||||||||  || ||||| |||     
T  43346896 gtatctggggaataccgggttcaattctcaaggggaacaacacttggccggtgcgcatgcctctacgtacgagccggattagtcgctcatctttggtggg 43346797  T
Q  119 tcggaaacca 128  Q
    ||||||||||    
T  43346796 tcggaaacca 43346787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 53 - 117
Target Start/End: Complemental strand, 19914786 - 19914722
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgg 117  Q
    |||||||||||||||| ||||||||||||||||||||| ||  |||| ||| |||||||||||||    
T  19914786 gaacaacgcttggccaatgcgcatgcctctacgcatgagccagattaatcgcccacctttgatgg 19914722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 36619365 - 36619281
Alignment:
Q  25 ggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacc 109  Q
    ||||||||||| |||| |||  ||||  ||||||| |||| |||||| |||||||||||||||||| ||| ||||||||||||||    
T  36619365 ggggaataccgggttcgattcccagggggaacaacacttgtccagtgtgcatgcctctacgcatgagccggattagtcgtccacc 36619281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 27028305 - 27028379
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||| |||||||||||||||||||||||| ||||| | | ||||||||  |||||||| ||| |||||||||    
T  27028305 gaacaacacttggccagtgcgcatgcctctacacatgagctggattagtcgctcacctttggtgggtcggaaacc 27028379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 27875205 - 27875112
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccaccttt 112  Q
    ||||| |||||||||||  ||| |||  ||||  ||| ||| |||||||||||| |||||||||||||||||  || |||||||||||||||||    
T  27875205 gtatctggggaataccggattcgattcccagggggaataacacttggccagtgcacatgcctctacgcatgagtcgcattagtcgtccaccttt 27875112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 117
Target Start/End: Complemental strand, 4228837 - 4228773
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgg 117  Q
    |||||||| ||||||||||| |||||| |||||||||| ||| |||||||| ||||| |||||||    
T  4228837 gaacaacgtttggccagtgcacatgcccctacgcatgagccggattagtcgcccaccattgatgg 4228773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 103
Target Start/End: Original strand, 16802119 - 16802199
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcg 103  Q
    |||||||||||||  ||| ||| | |||| |||||||| |||||||||||| ||||||||||||| || ||| ||||||||    
T  16802119 ccggggaataccggattcgattcttaggaggaacaacgattggccagtgcgtatgcctctacgcacgagccggattagtcg 16802199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 46414675 - 46414735
Alignment:
Q  27 ggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgca 87  Q
    |||||||| ||||| ||| |||||| ||| |||||||||||| ||||||||||||||||||    
T  46414675 ggaataccaagttcgattctcaggatgaataacgcttggccaatgcgcatgcctctacgca 46414735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 117
Target Start/End: Complemental strand, 49142752 - 49142688
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgg 117  Q
    ||||||||||| |||||||| |||||||||||||| || ||| |||||| | |||||||||||||    
T  49142752 gaacaacgcttagccagtgcacatgcctctacgcacgagccggattagttgcccacctttgatgg 49142688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 365132 - 365203
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatga 90  Q
    ||||||| ||||||||| |||| |||  ||||| |||||||||||   ||||||||||||||||||||||||    
T  365132 gtatccgaggaataccgggttcgattcacaggaggaacaacgcttaatcagtgcgcatgcctctacgcatga 365203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 21190896 - 21190829
Alignment:
Q  20 tatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgca 87  Q
    |||||||||||||||| |||| |||   |||| || ||||||||||| ||||||||||||||||||||    
T  21190896 tatccggggaataccgggttcgattcctaggaggagcaacgcttggctagtgcgcatgcctctacgca 21190829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 128
Target Start/End: Complemental strand, 45697273 - 45697198
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacca 128  Q
    ||||||| ||||  ||||||||||||||||||||||||   |  ||||||||||||||||| ||| ||||||||||    
T  45697273 gaacaacacttgatcagtgcgcatgcctctacgcatgagttgggttagtcgtccacctttggtgggtcggaaacca 45697198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 8734769 - 8734695
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||| |||||| ||||||||||||||| ||||| || ||  |||||||| ||||||||| ||| |||||||||    
T  8734769 gaacaatgcttgggcagtgcgcatgcctcaacgcacgagccagattagtcgcccacctttggtgggtcggaaacc 8734695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 21530774 - 21530848
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||| ||||| |||||| |||||||||||||| || |||||||| |||  |||||||| ||| |||||||||    
T  21530774 gaacaacacttggtcagtgcacatgcctctacgcacgagccgaattaatcgctcacctttggtgggtcggaaacc 21530848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 48244467 - 48244365
Alignment:
Q  25 ggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaa 124  Q
    ||||||||||| |||||||||  | |  |||||| |||||  |||||||  ||||||||||||||| ||| ||||||||  |||||||| ||||||| ||    
T  48244467 ggggaataccgggttcaatttctaaggggaacaatgcttgatcagtgcgtttgcctctacgcatgagccggattagtcgctcacctttggtggatcgaaa 48244368  T
Q  125 acc 127  Q
    |||    
T  48244367 acc 48244365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 109
Target Start/End: Complemental strand, 24983487 - 24983446
Alignment:
Q  68 agtgcgcatgcctctacgcatgaaccgaattagtcgtccacc 109  Q
    ||||||||||||||||||||||| ||| ||||||||||||||    
T  24983487 agtgcgcatgcctctacgcatgagccggattagtcgtccacc 24983446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 26423369 - 26423297
Alignment:
Q  54 aacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||||||||||||||| | |||||||||||| || ||  ||||||||| |||||||| ||| |||||||||    
T  26423369 aacaacgcttggccagtgcacctgcctctacgcacgagccagattagtcgttcacctttggtgg-tcggaaacc 26423297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 28744188 - 28744261
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaac 126  Q
    |||||| ||||||||||| ||||| |||||||  | || ||| |||||||||||||||||| ||| ||||||||    
T  28744188 gaacaatgcttggccagtacgcatacctctacatacgagccggattagtcgtccacctttggtgggtcggaaac 28744261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 42210344 - 42210271
Alignment:
Q  54 aacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||| |||||||||||||||||||||||||| || ||| |||| ||  ||||| ||| ||| |||||||||    
T  42210344 aacaacgtttggccagtgcgcatgcctctacgcacgagccggattaatcacccaccgttggtgggtcggaaacc 42210271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 44336892 - 44336953
Alignment:
Q  26 gggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgca 87  Q
    ||||||| ||||||| |||| |||||| || |||| |||| |||||||||||||||||||||    
T  44336892 gggaatatcgagttcgatttccaggaaaaataacgtttggtcagtgcgcatgcctctacgca 44336953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 22573811 - 22573902
Alignment:
Q  25 ggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgg 117  Q
    |||||||| || |||| |||||||||  |||||||  ||| ||||||||||||||| ||||||||| ||| |||| ||||||| | |||||||    
T  22573811 ggggaatatcgggttcgattttcaggg-gaacaacatttgaccagtgcgcatgcctttacgcatgagccggattaatcgtccatcattgatgg 22573902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 37514917 - 37515021
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    ||||||||||| | |||| ||||||||   |||||||| |||| ||||||||||| ||||||||| || ||| |||| |||| |||| ||  ||| ||||    
T  37514917 ccggggaatactgggttcgattttcagtgggaacaacgtttggtcagtgcgcatgtctctacgcacgagccggattaatcgttcaccattagtgggtcgg 37515016  T
Q  123 aaacc 127  Q
    |||||    
T  37515017 aaacc 37515021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 127
Target Start/End: Complemental strand, 41268033 - 41267933
Alignment:
Q  28 gaataccgagttcaattttcagga-agaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaac 126  Q
    ||||| ||||||| ||||| |||  |||| ||||||||   |||| ||||||||||||||||||     |||||||||||||||||||||| ||||||||    
T  41268033 gaatatcgagttcgatttttaggggagaataacgcttgattagtgtgcatgcctctacgcatgagttagattagtcgtccacctttgatgggtcggaaac 41267934  T
Q  127 c 127  Q
    |    
T  41267933 c 41267933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 112
Target Start/End: Complemental strand, 29805523 - 29805464
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccaccttt 112  Q
    |||||||| |||| ||||||||||| |||||||||||| || ||||| ||||| ||||||    
T  29805523 gaacaacgtttggtcagtgcgcatgtctctacgcatgagccaaattaatcgtctaccttt 29805464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 113
Target Start/End: Original strand, 14650313 - 14650403
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttg 113  Q
    |||| ||||| || |||| |||| ||||| |||||| ||||| |||||||  |||||||||||||||| |||  |||||||  ||||||||    
T  14650313 ccggagaatatcgggttcgatttccaggaggaacaatgcttgaccagtgcatatgcctctacgcatgagccgggttagtcgctcacctttg 14650403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 103
Target Start/End: Original strand, 38988934 - 38988976
Alignment:
Q  61 cttggccagtgcgcatgcctctacgcatgaaccgaattagtcg 103  Q
    ||||| |||||| ||||||||||||||||||||| ||||||||    
T  38988934 cttggtcagtgcacatgcctctacgcatgaaccggattagtcg 38988976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 43186539 - 43186589
Alignment:
Q  176 agtgtgtgtttggttctgcggtgataaaaattgatttcgatataattgatt 226  Q
    ||||||||||||||| |||||||   ||||||||||| |||||||||||||    
T  43186539 agtgtgtgtttggttgtgcggtggataaaattgattttgatataattgatt 43186589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 597826 - 597863
Alignment:
Q  175 aagtgtgtgtttggttctgcggtgataaaaattgattt 212  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  597826 aagtgtatgtttggttctgcggtgataaaatttgattt 597863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 9685778 - 9685827
Alignment:
Q  78 cctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||||||||| ||| ||||||| |||||| ||||||||| |||||||    
T  9685778 cctctacgcatgagccggattagtcatccaccattgatggataggaaacc 9685827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 127
Target Start/End: Original strand, 32768984 - 32769037
Alignment:
Q  74 catgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||||||||| ||  || ||||||||| |||||||| |||||||||||||    
T  32768984 catgcctctacgcacgagtcggattagtcgttcacctttggtggatcggaaacc 32769037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 229
Target Start/End: Complemental strand, 35772438 - 35772381
Alignment:
Q  172 attaagtgtgtgtttggttctgcggtgataaaaattgatttcgatataattgattttg 229  Q
    ||||||||||||||||||| ||||||||  | |||||||||  |||||||| ||||||    
T  35772438 attaagtgtgtgtttggttgtgcggtgaagataattgattttaatataatttattttg 35772381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 10317858 - 10317755
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    ||||||||||||| |||| |||  ||||  ||| ||| ||||| ||||||| ||||||||| |||| || |  ||||||||  |||||||| ||||||||    
T  10317858 ccggggaataccgggttcgattcccagggggaataacacttggtcagtgcgtatgcctctatgcat-aagcagattagtcgctcacctttggtggatcgg 10317760  T
Q  123 aaacc 127  Q
    |||||    
T  10317759 aaacc 10317755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 6851 - 6955
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    ||||||||||||| |||| |||  ||||  ||||||| |||||||||||||||||||||||||||||| ||| ||||||||  |||||||| ||| ||||    
T  6851 ccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgggtcgg 6950  T
Q  123 aaacc 127  Q
    |||||    
T  6951 aaacc 6955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 8810 - 8711
Alignment:
Q  27 ggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaac 126  Q
    ||||||||| |||| |||  ||||  |||||||||||||||||||||| ||||||||||||||| | | |||||||||||||||||| ||| ||||||||    
T  8810 ggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcttgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaac 8711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 127
Target Start/End: Original strand, 219404 - 219469
Alignment:
Q  62 ttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||| |||||    
T  219404 ttggccagtgcgcatgcctctacgcacgaactggattagtcgtccacctttgatggatcgaaaacc 219469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 125
Target Start/End: Complemental strand, 250099 - 250036
Alignment:
Q  62 ttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaa 125  Q
    |||||||||||||||||||||||||| || ||| ||||||||  | |||||| ||| |||||||    
T  250099 ttggccagtgcgcatgcctctacgcacgagccggattagtcgctcgcctttggtgggtcggaaa 250036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 55 - 127
Target Start/End: Original strand, 6000 - 6072
Alignment:
Q  55 acaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||||||||||||| |||||||||||||||||  ||||||||||||||||| ||| ||| |||||||||    
T  6000 acaacgcttggccagtgcacatgcctctacgcatgagacgaattagtcgtccaccattggtgggtcggaaacc 6072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 49; Significance: 4e-19; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 319414 - 319522
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatgga 118  Q
    ||||||||||||||||| |||  ||||  |||  |||||||||||||||||||||||| |||||| |||||| | | |||||||||||||||||| |||     
T  319414 gtatccggggaataccgggtttgatttctagggggaacaacgcttggccagtgcgcatccctctatgcatgagctggattagtcgtccacctttggtggg 319513  T
Q  119 tcggaaacc 127  Q
     ||||||||    
T  319514 gcggaaacc 319522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 566 - 670
Alignment:
Q  23 ccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcgg 122  Q
    ||||||||||||| |||| |||  ||||  ||||||| ||||  ||||| ||||||||||||| |||| ||  ||||||||  |||||||| ||| ||||    
T  566 ccggggaataccgggttcgattcgcagggggaacaacacttgatcagtgtgcatgcctctacgtatgagccagattagtcgctcacctttggtgggtcgg 665  T
Q  123 aaacc 127  Q
    |||||    
T  666 aaacc 670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 412143 - 412091
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtg 71  Q
    |||||||||||||||||||||| |||  ||||  ||||||||||||| |||||    
T  412143 gtatccggggaataccgagttcgattcacagggggaacaacgcttggtcagtg 412091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 128
Target Start/End: Original strand, 26181 - 26284
Alignment:
Q  25 ggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaa 124  Q
    ||||||||| | |||| |||| ||||  ||||||||||||||||||| ||||||||||||||| || ||| |||||||||||||  ||||||  ||||||    
T  26181 ggggaatactgggttcgatttccagggggaacaacgcttggccagtgtgcatgcctctacgcacgagccggattagtcgtccacaattgatgagtcggaa 26280  T
Q  125 acca 128  Q
    ||||    
T  26281 acca 26284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 1725 - 1623
Alignment:
Q  25 ggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaa 124  Q
    ||||||||||  |||| |||| ||||  |||||||| || |||||||||||||||||||||||||| || ||||||||| ||||||||| ||| ||| ||    
T  1725 ggggaataccaggttcgatttccagggggaacaacgattagccagtgcgcatgcctctacgcatgagccaaattagtcgcccacctttggtgggtcgaaa 1626  T
Q  125 acc 127  Q
    |||    
T  1625 acc 1623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 12599 - 12665
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggat 119  Q
    |||||||||||| |||||||||||||||||||||||||  || |||||||| |||||||||||||||    
T  12599 gaacaacgcttgaccagtgcgcatgcctctacgcatgagtcggattagtcgcccacctttgatggat 12665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 124
Target Start/End: Complemental strand, 155794 - 155723
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaa 124  Q
    |||||||||||||| |||||||||||||||||||| || ||| |||||||| ||||||||| ||| ||||||    
T  155794 gaacaacgcttggctagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaa 155723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 112
Target Start/End: Complemental strand, 25868 - 25808
Alignment:
Q  52 agaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccaccttt 112  Q
    |||||||||||||||||||||||||| |||||||| ||||||  |||||||  ||||||||    
T  25868 agaacaacgcttggccagtgcgcatgactctacgcgtgaaccagattagtcacccaccttt 25808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 127
Target Start/End: Complemental strand, 42916 - 42841
Alignment:
Q  52 agaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||| |||||| |||||||||||||||||| ||||| ||| |||||||| ||||||||| ||| |||||||||    
T  42916 agaacaatgcttggtcagtgcgcatgcctctacacatgagccggattagtcgcccacctttggtgggtcggaaacc 42841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 127
Target Start/End: Complemental strand, 7910 - 7844
Alignment:
Q  61 cttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||||||||||||||||||||||| | | | |||||||| ||||||||| |||||||||||||    
T  7910 cttggccagtgcgcatgcctctacgcattagctggattagtcgcccacctttggtggatcggaaacc 7844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 95096 - 94991
Alignment:
Q  19 gtatccggggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacc-tttgatgg 117  Q
    ||||||||||||||||  |||| ||||  |||||  |||||| ||| ||||||||||||||| ||||||||| ||| |||||||| ||||| |||| |||    
T  95096 gtatccggggaataccaggttcgatttctaggaa--acaacgtttgaccagtgcgcatgcctttacgcatgagccggattagtcgcccaccatttggtgg 94999  T
Q  118 atcggaaa 125  Q
     |||||||    
T  94998 gtcggaaa 94991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 65235 - 65161
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||||||||||||||||||||| |||||||||||| | | ||||||||  ||| |||||| |||||||||||    
T  65235 gaacaacgcttggccagtgcgcatgtctctacgcatgagctggattagtcgctcacttttgatagatcggaaacc 65161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 25111 - 25185
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||  |||| |||||||||||  |||||||||||| |  |||| ||||||||||||| |||||||||||||    
T  25111 gaacaacatttggacagtgcgcatgtttctacgcatgaatcagattaatcgtccacctttggtggatcggaaacc 25185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 15214 - 15267
Alignment:
Q  176 agtgtgtgtttggttctgcggtgataaaaattgatttcgatataattgattttg 229  Q
    ||||||||||||||| ||||||||  ||||||||||| |||| |||||||||||    
T  15214 agtgtgtgtttggttgtgcggtgacgaaaattgattttgatagaattgattttg 15267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 68543 - 68614
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    |||||||||||||   ||||||||||||||||||| || ||| |||||||| ||||||||| ||| ||| |||||    
T  68543 gaacaacgcttgg---gtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcgaaaacc 68614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 127
Target Start/End: Original strand, 17423 - 17490
Alignment:
Q  60 gcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||| ||||||||||||| ||||| || || ||| |||||||| ||||| ||||||| |||||||||    
T  17423 gcttgaccagtgcgcatgcttctacacacgagccggattagtcgcccaccattgatgggtcggaaacc 17490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 84
Target Start/End: Original strand, 8200 - 8231
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctac 84  Q
    ||||||||||||||||||||||||||||||||    
T  8200 gaacaacgcttggccagtgcgcatgcctctac 8231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 19281 - 19331
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcg 103  Q
    |||||||||||||| ||||||||  ||||||||||||| ||| ||||||||    
T  19281 gaacaacgcttggctagtgcgcagacctctacgcatgagccggattagtcg 19331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 41070 - 41144
Alignment:
Q  53 gaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||||| ||||| ||||| ||||||||||||||| || ||| |||||||| ||| ||||| ||  |||||||||    
T  41070 gaacaacacttggtcagtgtgcatgcctctacgcacgagccggattagtcgcccatctttggtgagtcggaaacc 41144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 103
Target Start/End: Original strand, 72631 - 72708
Alignment:
Q  26 gggaataccgagttcaattttcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcg 103  Q
    |||||||||| |||| |||| || |  |||||||||||| |||||||||||||||| | |||| | ||| ||||||||    
T  72631 gggaataccgggttcgatttccaaggggaacaacgcttgaccagtgcgcatgcctcaaagcataagccggattagtcg 72708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 127
Target Start/End: Original strand, 224336 - 224417
Alignment:
Q  46 tcaggaagaacaacgcttggccagtgcgcatgcctctacgcatgaaccgaattagtcgtccacctttgatggatcggaaacc 127  Q
    ||||| |||| |||| |||  |||||| ||| |||||||||| || ||| |||||||||||| ||||| ||| |||||||||    
T  224336 tcagggagaataacgtttgatcagtgcacatacctctacgcacgagccggattagtcgtccatctttggtgggtcggaaacc 224417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University