View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4822-Insertion-3 (Length: 900)

Name: NF4822-Insertion-3
Description: NF4822
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4822-Insertion-3
NF4822-Insertion-3
[»] chr8 (36 HSPs)
chr8 (8-509)||(34789101-34789607)
chr8 (646-883)||(34789742-34789978)
chr8 (697-884)||(7944453-7944639)
chr8 (696-881)||(5973037-5973221)
chr8 (766-884)||(11290170-11290288)
chr8 (697-879)||(41677103-41677286)
chr8 (714-864)||(8102918-8103069)
chr8 (697-879)||(15167344-15167527)
chr8 (697-878)||(15078750-15078930)
chr8 (697-849)||(30674334-30674485)
chr8 (767-879)||(39332405-39332517)
chr8 (688-864)||(34048630-34048804)
chr8 (766-864)||(2952220-2952318)
chr8 (693-867)||(8646209-8646381)
chr8 (766-864)||(30883335-30883433)
chr8 (766-864)||(45475823-45475921)
chr8 (766-867)||(41879184-41879285)
chr8 (767-867)||(5860744-5860844)
chr8 (773-864)||(42600788-42600879)
chr8 (766-864)||(13534686-13534783)
chr8 (766-864)||(13624226-13624323)
chr8 (766-864)||(23606628-23606726)
chr8 (791-884)||(5942682-5942775)
chr8 (767-882)||(14509983-14510097)
chr8 (767-864)||(23798261-23798358)
chr8 (698-809)||(34868108-34868219)
chr8 (766-864)||(10917397-10917495)
chr8 (766-864)||(37430157-37430255)
chr8 (768-879)||(25561496-25561605)
chr8 (766-860)||(3048516-3048610)
chr8 (767-809)||(9108554-9108596)
chr8 (688-756)||(5942780-5942848)
chr8 (766-806)||(38009151-38009191)
chr8 (771-822)||(23941095-23941146)
chr8 (710-756)||(34812701-34812747)
chr8 (717-746)||(9108610-9108639)
[»] chr1 (38 HSPs)
chr1 (697-884)||(45758491-45758679)
chr1 (711-866)||(38853537-38853693)
chr1 (719-884)||(43235720-43235886)
chr1 (697-884)||(5533309-5533495)
chr1 (767-884)||(38547035-38547152)
chr1 (767-884)||(26803945-26804059)
chr1 (773-864)||(27559654-27559745)
chr1 (766-864)||(5316697-5316795)
chr1 (766-864)||(23185444-23185542)
chr1 (766-864)||(44655758-44655856)
chr1 (766-864)||(50881447-50881545)
chr1 (775-864)||(16140072-16140161)
chr1 (766-867)||(33170773-33170874)
chr1 (766-884)||(39134720-39134839)
chr1 (771-864)||(9173026-9173119)
chr1 (771-864)||(9181008-9181101)
chr1 (773-864)||(17168973-17169064)
chr1 (766-864)||(5027566-5027664)
chr1 (766-864)||(14146317-14146415)
chr1 (766-864)||(41697135-41697233)
chr1 (767-864)||(4971617-4971714)
chr1 (775-860)||(6771812-6771897)
chr1 (774-863)||(40501796-40501885)
chr1 (768-860)||(1366878-1366970)
chr1 (767-879)||(6221680-6221791)
chr1 (766-864)||(10925951-10926050)
chr1 (766-864)||(3406435-3406533)
chr1 (766-864)||(3440287-3440385)
chr1 (766-824)||(6889668-6889726)
chr1 (766-824)||(6891514-6891572)
chr1 (773-864)||(19955734-19955825)
chr1 (766-860)||(21740935-21741029)
chr1 (766-864)||(50146313-50146411)
chr1 (773-867)||(13913485-13913581)
chr1 (766-809)||(17322621-17322664)
chr1 (766-809)||(22865459-22865502)
chr1 (711-856)||(35392295-35392437)
chr1 (774-864)||(51607445-51607536)
[»] chr4 (46 HSPs)
chr4 (697-884)||(52468277-52468462)
chr4 (697-864)||(36118389-36118554)
chr4 (697-884)||(39329322-39329508)
chr4 (766-864)||(54780788-54780886)
chr4 (766-867)||(32128592-32128693)
chr4 (717-860)||(10041949-10042092)
chr4 (685-848)||(39655171-39655334)
chr4 (701-884)||(27112021-27112202)
chr4 (766-864)||(2790739-2790837)
chr4 (766-864)||(10978911-10979009)
chr4 (769-863)||(36178684-36178778)
chr4 (766-864)||(43455529-43455627)
chr4 (766-864)||(47128998-47129096)
chr4 (767-864)||(38209590-38209687)
chr4 (766-864)||(16845032-16845131)
chr4 (710-864)||(24396945-24397099)
chr4 (773-864)||(34027590-34027681)
chr4 (778-864)||(5128852-5128938)
chr4 (774-864)||(37777229-37777319)
chr4 (775-864)||(1105543-1105632)
chr4 (767-864)||(35779325-35779421)
chr4 (766-867)||(48209248-48209349)
chr4 (705-787)||(5893099-5893181)
chr4 (766-861)||(36362869-36362964)
chr4 (769-879)||(15735091-15735196)
chr4 (693-809)||(24614019-24614135)
chr4 (686-808)||(30507038-30507162)
chr4 (766-864)||(32915396-32915494)
chr4 (766-864)||(34768572-34768670)
chr4 (766-864)||(35465118-35465215)
chr4 (766-860)||(51691913-51692009)
chr4 (775-863)||(37514671-37514759)
chr4 (766-824)||(16922327-16922385)
chr4 (775-880)||(37744916-37745022)
chr4 (766-864)||(54083240-54083338)
chr4 (771-824)||(2135324-2135377)
chr4 (791-864)||(4167914-4167987)
chr4 (776-861)||(13460221-13460306)
chr4 (791-864)||(40089527-40089600)
chr4 (766-809)||(9578662-9578705)
chr4 (773-824)||(10428202-10428253)
chr4 (766-857)||(16882393-16882484)
chr4 (780-879)||(40217228-40217327)
chr4 (766-824)||(17679451-17679509)
chr4 (773-821)||(23508515-23508564)
chr4 (771-824)||(45656226-45656279)
[»] chr5 (42 HSPs)
chr5 (686-884)||(10407447-10407644)
chr5 (766-884)||(36868872-36868990)
chr5 (697-879)||(40794254-40794436)
chr5 (766-883)||(33037767-33037884)
chr5 (697-884)||(34425889-34426075)
chr5 (767-884)||(2412074-2412191)
chr5 (767-879)||(14318382-14318494)
chr5 (697-879)||(2530826-2531006)
chr5 (766-867)||(38869359-38869460)
chr5 (768-879)||(22648734-22648845)
chr5 (766-864)||(2024638-2024736)
chr5 (686-884)||(11242236-11242432)
chr5 (766-864)||(27079017-27079115)
chr5 (766-867)||(22986554-22986655)
chr5 (767-864)||(26718946-26719043)
chr5 (767-864)||(26988690-26988787)
chr5 (766-864)||(1366522-1366620)
chr5 (766-864)||(34756362-34756460)
chr5 (766-863)||(28822338-28822435)
chr5 (767-846)||(7338023-7338102)
chr5 (773-864)||(9364297-9364388)
chr5 (773-864)||(16198797-16198888)
chr5 (766-867)||(36187875-36187976)
chr5 (766-860)||(2274900-2274994)
chr5 (766-864)||(16592070-16592168)
chr5 (766-864)||(23284058-23284156)
chr5 (766-864)||(30854335-30854433)
chr5 (766-864)||(31194608-31194705)
chr5 (775-864)||(15480094-15480183)
chr5 (776-864)||(19523205-19523293)
chr5 (773-857)||(40389539-40389623)
chr5 (766-809)||(606215-606258)
chr5 (774-864)||(16799331-16799421)
chr5 (774-864)||(24395745-24395835)
chr5 (697-806)||(35080700-35080806)
chr5 (767-884)||(10543660-10543776)
chr5 (766-809)||(27530544-27530587)
chr5 (767-864)||(41911614-41911711)
chr5 (773-864)||(7670930-7671022)
chr5 (771-811)||(22875001-22875041)
chr5 (780-864)||(27924088-27924172)
chr5 (766-808)||(31881430-31881472)
[»] chr2 (34 HSPs)
chr2 (688-881)||(16096996-16097188)
chr2 (697-864)||(21665632-21665797)
chr2 (686-884)||(24035465-24035662)
chr2 (688-879)||(38400788-38400978)
chr2 (766-864)||(3155222-3155320)
chr2 (766-864)||(6965012-6965110)
chr2 (766-864)||(12337447-12337545)
chr2 (766-864)||(28425709-28425807)
chr2 (766-864)||(29939861-29939959)
chr2 (767-848)||(42029166-42029247)
chr2 (774-867)||(8907086-8907179)
chr2 (767-864)||(10762565-10762662)
chr2 (767-884)||(16227368-16227485)
chr2 (771-864)||(24410442-24410535)
chr2 (766-864)||(9046034-9046133)
chr2 (766-864)||(4505899-4505997)
chr2 (766-884)||(12134039-12134157)
chr2 (711-852)||(13800489-13800630)
chr2 (686-884)||(11912676-11912874)
chr2 (767-823)||(11952588-11952643)
chr2 (766-864)||(26716133-26716232)
chr2 (773-864)||(27506746-27506837)
chr2 (766-853)||(34693991-34694078)
chr2 (766-853)||(34716403-34716490)
chr2 (766-824)||(40636183-40636241)
chr2 (710-796)||(44914848-44914932)
chr2 (766-807)||(22727456-22727497)
chr2 (693-753)||(12694794-12694854)
chr2 (766-864)||(7162789-7162887)
chr2 (775-864)||(3953011-3953100)
chr2 (766-878)||(7742132-7742245)
chr2 (693-809)||(10252476-10252591)
chr2 (795-884)||(22727530-22727619)
chr2 (800-864)||(37182675-37182739)
[»] scaffold1590 (1 HSPs)
scaffold1590 (710-884)||(202-375)
[»] scaffold0012 (1 HSPs)
scaffold0012 (713-864)||(206436-206586)
[»] chr7 (37 HSPs)
chr7 (766-884)||(27237421-27237539)
chr7 (768-864)||(36902924-36903020)
chr7 (686-864)||(2611180-2611358)
chr7 (766-884)||(7398437-7398555)
chr7 (767-864)||(9021799-9021896)
chr7 (767-879)||(6765680-6765792)
chr7 (697-856)||(38971267-38971424)
chr7 (766-864)||(29077226-29077324)
chr7 (697-858)||(23744808-23744968)
chr7 (697-864)||(23859079-23859245)
chr7 (710-867)||(18776708-18776865)
chr7 (766-864)||(48983842-48983940)
chr7 (813-884)||(17800266-17800337)
chr7 (766-864)||(8171537-8171635)
chr7 (766-864)||(20091279-20091377)
chr7 (767-853)||(21763586-21763672)
chr7 (774-879)||(20153192-20153297)
chr7 (697-864)||(23020415-23020579)
chr7 (766-877)||(36891571-36891682)
chr7 (773-867)||(10329415-10329509)
chr7 (766-864)||(19692100-19692198)
chr7 (766-864)||(38414874-38414972)
chr7 (700-809)||(12419428-12419536)
chr7 (775-864)||(12596294-12596383)
chr7 (771-864)||(24525688-24525781)
chr7 (767-846)||(33162338-33162417)
chr7 (766-864)||(10955490-10955588)
chr7 (781-864)||(9014782-9014858)
chr7 (766-879)||(12981317-12981430)
chr7 (770-879)||(18201128-18201237)
chr7 (791-864)||(23551094-23551167)
chr7 (686-751)||(26917650-26917715)
chr7 (767-823)||(9014177-9014233)
chr7 (766-846)||(26254017-26254097)
chr7 (774-864)||(8239693-8239783)
chr7 (773-864)||(47984974-47985066)
chr7 (766-864)||(28749716-28749813)
[»] scaffold0022 (2 HSPs)
scaffold0022 (700-884)||(40071-40257)
scaffold0022 (700-884)||(138131-138317)
[»] chr3 (33 HSPs)
chr3 (767-866)||(49393097-49393195)
chr3 (767-860)||(25855435-25855527)
chr3 (766-881)||(8420318-8420433)
chr3 (717-851)||(32319108-32319239)
chr3 (767-880)||(789929-790042)
chr3 (774-864)||(8073345-8073435)
chr3 (766-864)||(21582780-21582878)
chr3 (773-867)||(27078575-27078669)
chr3 (773-867)||(27084372-27084466)
chr3 (766-864)||(37168376-37168474)
chr3 (766-864)||(54619202-54619300)
chr3 (719-852)||(26279563-26279694)
chr3 (766-867)||(53506883-53506984)
chr3 (766-864)||(3953895-3953993)
chr3 (766-864)||(34290635-34290733)
chr3 (701-863)||(52374666-52374828)
chr3 (766-861)||(54407157-54407252)
chr3 (774-884)||(28689368-28689478)
chr3 (766-864)||(38681092-38681190)
chr3 (766-864)||(43207237-43207334)
chr3 (774-864)||(44708486-44708576)
chr3 (766-864)||(54574826-54574924)
chr3 (775-864)||(47467693-47467782)
chr3 (697-824)||(23641248-23641375)
chr3 (766-842)||(42453435-42453511)
chr3 (773-864)||(50939239-50939330)
chr3 (766-824)||(18372532-18372590)
chr3 (766-864)||(36716024-36716122)
chr3 (766-864)||(42098810-42098908)
chr3 (766-861)||(9878686-9878781)
chr3 (766-864)||(53149313-53149411)
chr3 (773-864)||(36605974-36606065)
chr3 (766-824)||(50258622-50258680)
[»] scaffold0039 (1 HSPs)
scaffold0039 (766-864)||(106544-106642)
[»] scaffold0182 (1 HSPs)
scaffold0182 (767-884)||(23993-24110)
[»] chr6 (20 HSPs)
chr6 (778-879)||(21183686-21183787)
chr6 (701-884)||(2477520-2477701)
chr6 (766-864)||(13727398-13727496)
chr6 (766-864)||(19737691-19737789)
chr6 (766-864)||(20711719-20711817)
chr6 (766-864)||(21479503-21479601)
chr6 (766-864)||(21280554-21280652)
chr6 (766-864)||(27788687-27788785)
chr6 (774-864)||(33774126-33774216)
chr6 (766-864)||(34397866-34397964)
chr6 (767-864)||(1155849-1155946)
chr6 (770-879)||(6159432-6159541)
chr6 (775-864)||(24711007-24711096)
chr6 (773-864)||(28075792-28075883)
chr6 (773-863)||(17353964-17354054)
chr6 (686-864)||(20611799-20611974)
chr6 (767-852)||(30121783-30121868)
chr6 (775-864)||(30832532-30832621)
chr6 (791-879)||(4036942-4037030)
chr6 (835-870)||(27994772-27994807)
[»] scaffold1320 (1 HSPs)
scaffold1320 (697-878)||(1346-1526)
[»] scaffold0097 (2 HSPs)
scaffold0097 (771-879)||(38916-39024)
scaffold0097 (697-752)||(39045-39100)
[»] scaffold0007 (1 HSPs)
scaffold0007 (697-884)||(230792-230976)
[»] scaffold0018 (1 HSPs)
scaffold0018 (772-877)||(173515-173620)
[»] scaffold0003 (1 HSPs)
scaffold0003 (793-852)||(351360-351419)
[»] scaffold0070 (1 HSPs)
scaffold0070 (766-864)||(1349-1447)
[»] scaffold0001 (1 HSPs)
scaffold0001 (775-825)||(183105-183155)
[»] scaffold0227 (2 HSPs)
scaffold0227 (835-879)||(16018-16062)
scaffold0227 (774-809)||(16126-16161)


Alignment Details
Target: chr8 (Bit Score: 396; Significance: 0; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 396; E-Value: 0
Query Start/End: Original strand, 8 - 509
Target Start/End: Original strand, 34789101 - 34789607
Alignment:
Q  8 gttagagaatatactattaaca---tgtgatgtggttcacttcaactactaccaagtcaaattaaattcaacgccctttcattctcatnnnnnnnn--ca 102  Q
    ||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||    
T  34789101 gttagagaatatactattaacaacatgtgatgtggttcacttcaactactaccaagtcaaattaaattcaacgccctttcattctcataaaaaaaaaaca 34789200  T
Q  103 gtagaaatagtagagattaaacagaaaaggtaaatatggttaccagatgacatggtattattgaatctggacattcaagtcaaaagtcagagaacattga 202  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  34789201 gtagtaatagtagagattaaacagaaaaagtaaatatggttaccagatgacatggtattattgaatctggacattcaaatcaaaagtcagagaacattga 34789300  T
Q  203 tattcttgaaaccgtagaatttgttgtgttgtagtgnnnnnnnnnnnnnncacacgcgagagaaagaagtgatttggtttcacacggaggtggaaaatgg 302  Q
    ||||||||||||||||||||||||||||||||||||              ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  34789301 tattcttgaaaccgtagaatttgttgtgttgtagtgaaaaaagaaaaaaacacacgccagagaaagaagtgatttggtttcacacggaggtggaaaatgg 34789400  T
Q  303 aaatgaaagaaagagagaggaaaaaaggttatagatacggacagacaatggagttggagttggagttggagctggagctgtctgtctggggttgaattga 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  34789401 aaatgaaagaaagagagaggaaaaaaggttatagatacggacagacaatggagttggagttggagttggagttggagctgtctgtctggggttgaattga 34789500  T
Q  403 aaagttgaagagtaaggccaacgtgcttagtattaaacaaacaacaactccaccaggtaagaccaagacaacaaaggtaataagatattttatttatgaa 502  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34789501 aaagttgaagagtaaggccaacgtgcttagtattaaacaaacaacaactccaccaggtaagaccaagacaacaaaggtaataagatattttatttatgaa 34789600  T
Q  503 tcatgtt 509  Q
    |||||||    
T  34789601 tcatgtt 34789607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 150; E-Value: 8e-79
Query Start/End: Original strand, 646 - 883
Target Start/End: Original strand, 34789742 - 34789978
Alignment:
Q  646 ctaagcttgcggaagagcaacccctataatatcaaccattagggtcattcttacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaa 745  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||| |||||  |||||||    
T  34789742 ctaagcttgcggaagagcaacgcctataatatcaaccattagggtcatttttaagaatctggaagctcggctctataagtgaaaaaaggtccgtaataaa 34789841  T
Q  746 ataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaa 845  Q
    |||||||||||         |||||||| ||||||||||||||||| |||||||||||||||||   |||||||||||||||| |||| |||||||||||    
T  34789842 ataaaaatgtatttttttt-aaaagaacgatgttctatttaaatctcttaaaagataaatacaagatgtcgtatatatgttgtacacccaaaggtgaaaa 34789940  T
Q  846 tcactaccgtatacatgagaaatatcaaaccaccatcc 883  Q
    ||||||||||||||||||||||||||||||||||||||    
T  34789941 tcactaccgtatacatgagaaatatcaaaccaccatcc 34789978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 697 - 884
Target Start/End: Original strand, 7944453 - 7944639
Alignment:
Q  697 tacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatcttttaa 796  Q
    |||||||| |||||||||  ||||||| ||||||||||||  ||||||||||||||||||         |||||||||||||| ||||||||| ||||||    
T  7944453 tacgaatcaggaagctcgattctgtaattgaaaagaggtccgtaataaaataaaaatgtatttttttt-aaaagaacaatgttttatttaaattttttaa 7944551  T
Q  797 aagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccaccatccc 884  Q
    || |||||||||| | | |||||||||||||| |||| |||||||||||||||||||||||||||||| ||  |||||||||||||||    
T  7944552 aaaataaatacaaggtgccgtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccaccatccc 7944639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 696 - 881
Target Start/End: Original strand, 5973037 - 5973221
Alignment:
Q  696 ttacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatctttta 795  Q
    |||||| || ||| ||| |||||||||| ||||||||||||| ||||||||||||||||||         |||||||||||||||||||||||| |||||    
T  5973037 ttacgattccggaggcttggctctgtaaatgaaaagaggtctgtaataaaataaaaatgtattcgtttt-aaaagaacaatgttctatttaaatttttta 5973135  T
Q  796 aaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccaccat 881  Q
    |||||||||||||| | |||||||||||||||| |||| | || ||||||||| ||||||||||| ||| ||  ||||||||||||    
T  5973136 aaagataaatacaaggtgtcgtatatatgttgtacacccatagatgaaaatcattaccgtatacacgaggaacctcaaaccaccat 5973221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 766 - 884
Target Start/End: Complemental strand, 11290288 - 11290170
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgaga 865  Q
    |||||||||||||| ||||||||| ||||||||||||||||||| | |||||||||||||||| |||  ||||||||||||||||||||||||||||||     
T  11290288 aaaagaacaatgttttatttaaattttttaaaagataaatacaaggtgtcgtatatatgttgtacactcaaaggtgaaaatcactaccgtatacatgagc 11290189  T
Q  866 aatatcaaaccaccatccc 884  Q
    ||  |||||||||||||||    
T  11290188 aacctcaaaccaccatccc 11290170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 697 - 879
Target Start/End: Original strand, 41677103 - 41677286
Alignment:
Q  697 tacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatctttt-a 795  Q
    |||||||  ||| |||||||||||| |||||||||||  ||||||||||||||||| |||         |||||||||||||||||||||||| |||| |    
T  41677103 tacgaattcggaggctcggctctgtgagtgaaaagagacctataataaaataaaaacgtatttttttttaaaagaacaatgttctatttaaattttttta 41677202  T
Q  796 aaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccacc 879  Q
    ||||||||||||||   ||||||||||||   | || |||||||||||||||||||| ||||||||||| ||  ||||||||||    
T  41677203 aaagataaatacaagatgtcgtatatatgcgatacatctaaaggtgaaaatcactactgtatacatgaggaacctcaaaccacc 41677286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 714 - 864
Target Start/End: Complemental strand, 8103069 - 8102918
Alignment:
Q  714 ggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnn-aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagc 812  Q
    |||||||||| |||||||||| |||||||||||||||||||||          |||| || |||||| ||||||||| ||||||||||||||||||| |     
T  8103069 ggctctgtaaatgaaaagaggcctataataaaataaaaatgtatttttttcttaaaataataatgttatatttaaattttttaaaagataaatacaaggt 8102970  T
Q  813 gtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |  |||||||||  || ||||||||||||||||||| |||||||||||||||    
T  8102969 gcagtatatatgcggtacacctaaaggtgaaaatcattaccgtatacatgag 8102918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 697 - 879
Target Start/End: Original strand, 15167344 - 15167527
Alignment:
Q  697 tacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnn-aaaagaacaatgttctatttaaatctttta 795  Q
    |||||||||| | |||| |||||||||||||||| | |||  |||||||||||||| |||          |||||||||||||||||||||||| |||||    
T  15167344 tacgaatctgaaggctctgctctgtaagtgaaaaaaagtccgtaataaaataaaaacgtattttatttttaaaagaacaatgttctatttaaatttttta 15167443  T
Q  796 aaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccacc 879  Q
    ||||||||||| |||| || |||||||||   | |||| ||| ||||||||||||| |||||||||||| ||  ||||||||||    
T  15167444 aaagataaatataaagtgttgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaaccacc 15167527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 697 - 878
Target Start/End: Complemental strand, 15078930 - 15078750
Alignment:
Q  697 tacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatcttttaa 796  Q
    |||||||||| | |||| |||||||||||||||||| |||  |||||||||||||| |||         ||||||| |||||||||||||||  ||||||    
T  15078930 tacgaatctgaaggctctgctctgtaagtgaaaagaagtccgtaataaaataaaaacgtatttttttt-aaaagaataatgttctatttaaaatttttaa 15078832  T
Q  797 aagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccac 878  Q
    |||||||||| || | |  ||||||||| | | |||| ||| ||||||||||||| |||||||||||| ||  |||||||||    
T  15078831 aagataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaaccac 15078750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 697 - 849
Target Start/End: Original strand, 30674334 - 30674485
Alignment:
Q  697 tacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatcttttaa 796  Q
    |||||||||||| |||||||||||||||||||||||||    |||||||||||||| |||         ||| |||||||||||||||||||| ||||||    
T  30674334 tacgaatctggaggctcggctctgtaagtgaaaagaggctcgtaataaaataaaaacgtatttttttttaaa-gaacaatgttctatttaaatgttttaa 30674432  T
Q  797 aagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcac 849  Q
    |||||||||| || | ||||||||||||   | |||  |||||||||||||||    
T  30674433 aagataaatataaggtgtcgtatatatgcgatacactcaaaggtgaaaatcac 30674485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 767 - 879
Target Start/End: Original strand, 39332405 - 39332517
Alignment:
Q  767 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaa 866  Q
    ||||||||||||||||||||| | ||| ||||||||||||||| | ||| |||||| |  || || | |||||||||||||||||||||||||||||| |    
T  39332405 aaagaacaatgttctatttaattttttaaaaagataaatacaaggtgtcatatataagcggtacatccaaaggtgaaaatcactaccgtatacatgagga 39332504  T
Q  867 atatcaaaccacc 879  Q
    |  ||||||||||    
T  39332505 acctcaaaccacc 39332517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 688 - 864
Target Start/End: Original strand, 34048630 - 34048804
Alignment:
Q  688 ggtcattcttacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaa 787  Q
    |||| ||| ||||||| |||| ||||||||||||||||||||| ||  |  |||||||||||||||||           |||||||||||||||||||||    
T  34048630 ggtcgttcctacgaatttggaggctcggctctgtaagtgaaaatagacccgtaataaaataaaaatgtttttttt----aaagaacaatgttctatttaa 34048725  T
Q  788 atcttttaaaagataaatacaaagcgtcgtatatatgt-tg-tgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |  ||||||||||||||||||| | ||||||||||| | || | |||| |||| ||||||||||||| |||||||||||    
T  34048726 acattttaaaagataaatacaatgtgtcgtatatatatatgatacacccaaagatgaaaatcactactgtatacatgag 34048804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 766 - 864
Target Start/End: Original strand, 2952220 - 2952318
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || ||||||||||||||||||||| | ||||||||||  || |||| | || ||||||| |||||||||||||||||    
T  2952220 aaaagagcaatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgag 2952318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 693 - 867
Target Start/End: Complemental strand, 8646381 - 8646209
Alignment:
Q  693 ttcttacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatctt 792  Q
    |||||||||||||| ||| |||   |||||||| ||||||| ||  |||||||||||||| |||         |||||||||||||||||||||||| ||    
T  8646381 ttcttacgaatctgaaagttcgatcctgtaagtcaaaagagatccttaataaaataaaaacgtaattttttt-aaaagaacaatgttctatttaaatttt 8646283  T
Q  793 ttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaa 867  Q
    ||||||||||||||||| |  |||||||||||   | |||  ||| ||||||||||||||||||||||| |||||    
T  8646282 ttaaaagataaatacaaggtatcgtatatatg-catacacgcaaatgtgaaaatcactaccgtatacataagaaa 8646209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 766 - 864
Target Start/End: Complemental strand, 30883433 - 30883335
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||| | |||||||||| |||||||||||||||||    
T  30883433 aaaagagcaatgttctatttatattttttaaaagataaatacaatgtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgag 30883335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 766 - 864
Target Start/End: Complemental strand, 45475921 - 45475823
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||| | |||||||||| |||||||||||||||||    
T  45475921 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgag 45475823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 766 - 867
Target Start/End: Complemental strand, 41879285 - 41879184
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgaga 865  Q
    ||||||||||||||||||||| || ||||||||||||||||||| |   ||||||||||  || || | |||||||||||| ||||||| ||||||||||    
T  41879285 aaaagaacaatgttctatttatattttttaaaagataaatacaaggtaccgtatatatgcggtacatccaaaggtgaaaatgactaccgaatacatgaga 41879186  T
Q  866 aa 867  Q
    ||    
T  41879185 aa 41879184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 767 - 867
Target Start/End: Original strand, 5860744 - 5860844
Alignment:
Q  767 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaa 866  Q
    ||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||| | |||||||||| |||||| ||||||||||||    
T  5860744 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgagaa 5860843  T
Q  867 a 867  Q
    |    
T  5860844 a 5860844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 773 - 864
Target Start/End: Complemental strand, 42600879 - 42600788
Alignment:
Q  773 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    ||||| |||||||| || |||||||||||||||| || | | ||||||||||| || |||| |||||||||||| |||||||||||||||||    
T  42600879 caatgatctatttatattttttaaaagataaatataaggtgccgtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgag 42600788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 766 - 864
Target Start/End: Original strand, 13534686 - 13534783
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || ||||||||||||||||| ||| | ||||||||||  || |||| | |||||||||| |||||||||||||||||    
T  13534686 aaaagagcaatgttctatttatattttttaaaagataaatac-aagtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgag 13534783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 766 - 864
Target Start/End: Original strand, 13624226 - 13624323
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || ||||||||||||||||| ||| | ||||||||||  || |||| | |||||||||| |||||||||||||||||    
T  13624226 aaaagagcaatgttctatttatattttttaaaagataaatac-aagtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgag 13624323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 766 - 864
Target Start/End: Original strand, 23606628 - 23606726
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || |||||||||||||||| || | | ||||||||||  || |||| |||||| ||||| |||||||||||||||||    
T  23606628 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatgag 23606726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 791 - 884
Target Start/End: Complemental strand, 5942775 - 5942682
Alignment:
Q  791 ttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccaccatccc 884  Q
    |||||||||||||||||||   ||||||||| ||  || |||| |||||||||||||||||||||||||||||| ||  |||||||||| ||||    
T  5942775 ttttaaaagataaatacaagatgtcgtatatgtgcggtacacccaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccaccctccc 5942682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 767 - 882
Target Start/End: Original strand, 14509983 - 14510097
Alignment:
Q  767 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtg-aaaatcactaccgtatacatgaga 865  Q
    |||||||||||||| |||||||| |||||||||| ||||| || | |||||||||| |  || |||| ||| ||| |||||||||||||||||||||||     
T  14509983 aaagaacaatgttcaatttaaattttttaaaagacaaatataaggtgtcgtatatacg--gtacacccaaatgtgaaaaatcactaccgtatacatgagt 14510080  T
Q  866 aatatcaaaccaccatc 882  Q
    ||  |||||||||||||    
T  14510081 aacctcaaaccaccatc 14510097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 767 - 864
Target Start/End: Original strand, 23798261 - 23798358
Alignment:
Q  767 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    ||||| |||||||||||||| || |||||||||||||||| || | | ||||||||||  || |||| ||| |||||||| |||||||||||||||||    
T  23798261 aaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgag 23798358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 698 - 809
Target Start/End: Original strand, 34868108 - 34868219
Alignment:
Q  698 acgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatcttttaaa 797  Q
    |||||||| || ||||||||| ||||||||||||||  | ||||||||||||||| |||          |||||| |||||||||||||||| |||||||    
T  34868108 acgaatctcgaggctcggctccgtaagtgaaaagagacccataataaaataaaaacgtattttttttttaaagaataatgttctatttaaattttttaaa 34868207  T
Q  798 agataaatacaa 809  Q
    ||||||||||||    
T  34868208 agataaatacaa 34868219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 766 - 864
Target Start/End: Complemental strand, 10917495 - 10917397
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||| ||||||| |||||||| || |||||||||||||||| || | | ||||||||||  || |||| |||||||||||| |||||| ||||||||||    
T  10917495 aaaaaaacaatgatctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccttatacatgag 10917397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 766 - 864
Target Start/End: Original strand, 37430157 - 37430255
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| | |||||||||||| || ||||||||||||||||||| | | ||||||||||   | |||||| |||| ||||| |||||||||||||||||    
T  37430157 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcgttacacctagaggtaaaaatgactaccgtatacatgag 37430255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 768 - 879
Target Start/End: Original strand, 25561496 - 25561605
Alignment:
Q  768 aagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaa 867  Q
    ||||| ||||||||||||||||||||| |||||||||||||| | | ||||||||||  |   ||| ||| |||||||||||| ||||||||||||| ||    
T  25561496 aagaataatgttctatttaaatctttt-aaagataaatacaaggtgccgtatatatg-cgataacccaaatgtgaaaatcactgccgtatacatgaggaa 25561593  T
Q  868 tatcaaaccacc 879  Q
      ||||||||||    
T  25561594 cctcaaaccacc 25561605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 766 - 860
Target Start/End: Original strand, 3048516 - 3048610
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtataca 860  Q
    |||||| |||| | ||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| || ||||||| |||||||||||||    
T  3048516 aaaagagcaatatactatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagagatgaaaatgactaccgtataca 3048610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 767 - 809
Target Start/End: Complemental strand, 9108596 - 9108554
Alignment:
Q  767 aaagaacaatgttctatttaaatcttttaaaagataaatacaa 809  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  9108596 aaagaacaatgttctatttaaattttttaaaagataaatacaa 9108554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 688 - 756
Target Start/End: Complemental strand, 5942848 - 5942780
Alignment:
Q  688 ggtcattcttacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgta 756  Q
    |||| ||| |||||||| |||||||||  |||||||||||||||||| |  ||||||||||||||||||    
T  5942848 ggtcgttcctacgaatccggaagctcgattctgtaagtgaaaagaggaccgtaataaaataaaaatgta 5942780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 766 - 806
Target Start/End: Original strand, 38009151 - 38009191
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaata 806  Q
    |||||||||||||||||||||||  ||||||||||||||||    
T  38009151 aaaagaacaatgttctatttaaaatttttaaaagataaata 38009191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 771 - 822
Target Start/End: Original strand, 23941095 - 23941146
Alignment:
Q  771 aacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatata 822  Q
    ||||||||| ||||||||| ||||||||||||||||||| | ||| ||||||    
T  23941095 aacaatgttttatttaaattttttaaaagataaatacaaggtgtcatatata 23941146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 710 - 756
Target Start/End: Original strand, 34812701 - 34812747
Alignment:
Q  710 gctcggctctgtaagtgaaaagaggtctataataaaataaaaatgta 756  Q
    ||||| |||||||||||||||||||| | | ||||||||||||||||    
T  34812701 gctcgactctgtaagtgaaaagaggtatgtcataaaataaaaatgta 34812747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 746
Target Start/End: Complemental strand, 9108639 - 9108610
Alignment:
Q  717 tctgtaagtgaaaagaggtctataataaaa 746  Q
    ||||||||||||||||||||||||||||||    
T  9108639 tctgtaagtgaaaagaggtctataataaaa 9108610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 3e-38; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 697 - 884
Target Start/End: Complemental strand, 45758679 - 45758491
Alignment:
Q  697 tacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnn-aaaagaacaatgttctatttaaatctttta 795  Q
    ||||||||  || |||||||||||||||||||||||||||   |||||||||||||||||          |||||||||||||||||||||||| |||||    
T  45758679 tacgaatccagaggctcggctctgtaagtgaaaagaggtccgaaataaaataaaaatgtatattttttttaaaagaacaatgttctatttaaatttttta 45758580  T
Q  796 aaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccaccatccc 884  Q
    |||||||||| ||| | || ||||||||||| | || | |||||||||||||||||||||||||||||| ||  |||||||||||||||    
T  45758579 aaagataaatgcaaggtgttgtatatatgttatacatccaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccaccatccc 45758491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 711 - 866
Target Start/End: Complemental strand, 38853693 - 38853537
Alignment:
Q  711 ctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnn-aaaagaacaatgttctatttaaatcttttaaaagataaatacaa 809  Q
    ||||||||| ||||||||| ||||   |||||||||||||||||||          ||||||||| |||||||||||||| ||||||| |||||||||||    
T  38853693 ctcggctctataagtgaaatgaggcacataataaaataaaaatgtattttttttttaaaagaacagtgttctatttaaattttttaaatgataaatacaa 38853594  T
Q  810 agcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaa 866  Q
     | ||||||||||||||||  | | ||||||||||||||||||||||||||||||||    
T  38853593 ggtgtcgtatatatgttgtatatccaaaggtgaaaatcactaccgtatacatgagaa 38853537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 719 - 884
Target Start/End: Original strand, 43235720 - 43235886
Alignment:
Q  719 tgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatctttta--aaagataaatacaaagcgtcg 816  Q
    |||||||||||||||| || ||||||||||||||||||         ||| ||| |||||||||||||||| ||||   ||||||||||||||   ||||    
T  43235720 tgtaagtgaaaagaggcctgtaataaaataaaaatgtatttttttctaaa-gaaaaatgttctatttaaatttttttttaaagataaatacaagatgtcg 43235818  T
Q  817 tatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccaccatccc 884  Q
    |||||||| ||| |||| ||||||||||||||||| |||||||||||| ||  |||||||||||||||    
T  43235819 tatatatgatgtacacccaaaggtgaaaatcactatcgtatacatgaggaacctcaaaccaccatccc 43235886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 697 - 884
Target Start/End: Complemental strand, 5533495 - 5533309
Alignment:
Q  697 tacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatctttt-a 795  Q
    |||||||| ||| ||| | ||||||||||||||||||  |  ||||||||||||||||||         ||||||||||| |||||||||||| |||| |    
T  5533495 tacgaatccggaggcttgactctgtaagtgaaaagagacccgtaataaaataaaaatgtattttttt--aaaagaacaatattctatttaaattttttta 5533398  T
Q  796 aaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccaccatccc 884  Q
    ||||||||| |||| | | |||||||||| ||| ||   |||||||||||||||||||||||||||||| ||  |||||||||||||||    
T  5533397 aaagataaacacaaggtgccgtatatatgatgtacaatcaaaggtgaaaatcactaccgtatacatgaggaaactcaaaccaccatccc 5533309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 767 - 884
Target Start/End: Original strand, 38547035 - 38547152
Alignment:
Q  767 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaa 866  Q
    ||||| ||||||||||||||||| ||||||||||||||||||| | | ||||||||||| || |||| ||| ||||||||||||| | |||||||||| |    
T  38547035 aaagatcaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgtggtacacccaaatgtgaaaatcactatcatatacatgagga 38547134  T
Q  867 atatcaaaccaccatccc 884  Q
    |  |||||||||| ||||    
T  38547135 acctcaaaccaccctccc 38547152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 767 - 884
Target Start/End: Complemental strand, 26804059 - 26803945
Alignment:
Q  767 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaa 866  Q
    ||||||||||| | ||||||||| |||||||||||||||||||   ||||||||||||   | |||   |||||||||||||||||||||||||||||||    
T  26804059 aaagaacaatgctatatttaaattttttaaaagataaatacaagatgtcgtatatatgcgatacac---aaggtgaaaatcactaccgtatacatgagaa 26803963  T
Q  867 atatcaaaccaccatccc 884  Q
    |  |||||||||| ||||    
T  26803962 acctcaaaccaccctccc 26803945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 773 - 864
Target Start/End: Complemental strand, 27559745 - 27559654
Alignment:
Q  773 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||||||||||| || |||||||||||||||| || | ||||||||||||  || |||| |||||||||||| |||||||||||||||||    
T  27559745 caatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 27559654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 766 - 864
Target Start/End: Complemental strand, 5316795 - 5316697
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||| | |||||||||| |||||||||||||||||    
T  5316795 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgag 5316697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 766 - 864
Target Start/End: Complemental strand, 23185542 - 23185444
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||| | |||||||||| |||||||||||||||||    
T  23185542 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgag 23185444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 766 - 864
Target Start/End: Complemental strand, 44655856 - 44655758
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | ||||||||||||  || |||| | |||| ||||| |||||||||||||||||    
T  44655856 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgag 44655758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 766 - 864
Target Start/End: Complemental strand, 50881545 - 50881447
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | ||||||||||||  || || ||| |||||||||| ||||| |||||||||||    
T  50881545 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacatctagaggtgaaaatgactacagtatacatgag 50881447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 775 - 864
Target Start/End: Complemental strand, 16140161 - 16140072
Alignment:
Q  775 atgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||||||||| || ||||||||||||||||||| | || |||||||||  || |||||| |||||||||| |||||||||||||||||    
T  16140161 atgttctatttatattttttaaaagataaatacaaggtgttgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgag 16140072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 766 - 867
Target Start/End: Complemental strand, 33170874 - 33170773
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgaga 865  Q
    |||| ||||||||| ||||||||| ||||||||  ||||||||| | || |||||||||  || |||| || ||||||||||||||||||||||||||||    
T  33170874 aaaaaaacaatgttatatttaaattttttaaaacgtaaatacaatgtgttgtatatatgcggtacaccaaatggtgaaaatcactaccgtatacatgaga 33170775  T
Q  866 aa 867  Q
    ||    
T  33170774 aa 33170773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 766 - 884
Target Start/End: Original strand, 39134720 - 39134839
Alignment:
Q  766 aaaagaacaatgttctatttaaatctttt-aaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||||||||||||||||||||| |||| ||||||||||||||| | |  |||||||||   | |||| |||||||| ||||||||| |||||||||||    
T  39134720 aaaagaacaatgttctatttaaattttttaaaaagataaatacaaggtgctgtatatatgcaatacacccaaaggtgataatcactactgtatacatgag 39134819  T
Q  865 aaatatcaaaccaccatccc 884  Q
     ||  |||||||||| ||||    
T  39134820 gaacctcaaaccaccctccc 39134839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 771 - 864
Target Start/End: Original strand, 9173026 - 9173119
Alignment:
Q  771 aacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||||||||||||| || |||||||||||||||| || | | ||||||||||  || || | |||||||||||| |||||||||||||||||    
T  9173026 aacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgag 9173119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 771 - 864
Target Start/End: Original strand, 9181008 - 9181101
Alignment:
Q  771 aacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||||||||||||| || |||||||||||||||| || | | ||||||||||  || || | |||||||||||| |||||||||||||||||    
T  9181008 aacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgag 9181101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 773 - 864
Target Start/End: Complemental strand, 17169064 - 17168973
Alignment:
Q  773 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||||||||||| || |||||||||||||||| || | || |||||||||  || |||| |||||||||||| |||||| ||||||||||    
T  17169064 caatgttctatttatattttttaaaagataaatataaggtgttgtatatatgcggtacacccaaaggtgaaaatgactaccatatacatgag 17168973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 766 - 864
Target Start/End: Complemental strand, 5027664 - 5027566
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||| | |||||||||| |||||| |||| |||||    
T  5027664 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatagatgag 5027566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 766 - 864
Target Start/End: Complemental strand, 14146415 - 14146317
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| | |||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||| | || ||||||| |||||||||||||||||    
T  14146415 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgag 14146317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 766 - 864
Target Start/End: Original strand, 41697135 - 41697233
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| | |||||||||||| || |||||||||||||||||||||  |||||||||||  || || | | | |||||||| |||||||||||||||||    
T  41697135 aaaagagcgatgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcagtacatccagaagtgaaaatgactaccgtatacatgag 41697233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 767 - 864
Target Start/End: Original strand, 4971617 - 4971714
Alignment:
Q  767 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    ||||| |||||||||||||| || ||||||||||||||||||| |   ||||||||||  || |||| | | |||||||| |||||||||||||||||    
T  4971617 aaagagcaatgttctatttatattttttaaaagataaatacaaggtaccgtatatatgcggtacacccataagtgaaaatgactaccgtatacatgag 4971714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 775 - 860
Target Start/End: Complemental strand, 6771897 - 6771812
Alignment:
Q  775 atgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtataca 860  Q
    |||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||| | |||||||||| |||||||||||||    
T  6771897 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtataca 6771812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 774 - 863
Target Start/End: Original strand, 40501796 - 40501885
Alignment:
Q  774 aatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatga 863  Q
    |||| |||||||| || |||||||||||||||| || | ||||||||||||  || |||| |||||| ||||| ||||||||||||||||    
T  40501796 aatgatctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatga 40501885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 768 - 860
Target Start/End: Original strand, 1366878 - 1366970
Alignment:
Q  768 aagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtataca 860  Q
    |||| |||||||||||||| || |||||||||||||||| || | | ||||||||||  || |||| |||| ||||||| |||||||||||||    
T  1366878 aagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaagatgaaaatgactaccgtataca 1366970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 767 - 879
Target Start/End: Complemental strand, 6221791 - 6221680
Alignment:
Q  767 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaa 866  Q
    ||||||||||||||||||||||| ||||||||||||||||||| | | |||||||| |  || || | ||| |||||||||| || |||||| ||||| |    
T  6221791 aaagaacaatgttctatttaaat-ttttaaaagataaatacaatgtgccgtatataagcggtacatcaaaatgtgaaaatcattatcgtatatatgagga 6221693  T
Q  867 atatcaaaccacc 879  Q
    |  ||||||||||    
T  6221692 acctcaaaccacc 6221680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 766 - 864
Target Start/End: Original strand, 10925951 - 10926050
Alignment:
Q  766 aaaagaacaatgttctatttaaatctttt-aaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    ||||||||||| |||||||||| | |||| |||| |||||||||| | | ||||||||||   |||| | |||| |||||||||||||||||||||||||    
T  10925951 aaaagaacaatattctatttaagtatttttaaaaaataaatacaatgtgccgtatatatgagatgcatccaaagatgaaaatcactaccgtatacatgag 10926050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 766 - 864
Target Start/End: Complemental strand, 3406533 - 3406435
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| | |||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||    |||||||||| |||||||||||||||||    
T  3406533 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgag 3406435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 766 - 864
Target Start/End: Original strand, 3440287 - 3440385
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| | |||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||    |||||||||| |||||||||||||||||    
T  3440287 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgag 3440385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 766 - 824
Target Start/End: Complemental strand, 6889726 - 6889668
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatg 824  Q
    |||||| |||||||||||||| || |||||||||||||||||||||  |||||||||||    
T  6889726 aaaagagcaatgttctatttatattttttaaaagataaatacaaagtatcgtatatatg 6889668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 766 - 824
Target Start/End: Complemental strand, 6891572 - 6891514
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatg 824  Q
    |||||| |||||||||||||| || |||||||||||||||||||||  |||||||||||    
T  6891572 aaaagagcaatgttctatttatattttttaaaagataaatacaaagtatcgtatatatg 6891514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 773 - 864
Target Start/End: Complemental strand, 19955825 - 19955734
Alignment:
Q  773 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    ||||| |||||||| || |||||||||||||||| || |   ||||||||||  || |||| |||||||||||| ||||||||||| |||||    
T  19955825 caatgatctatttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgag 19955734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 766 - 860
Target Start/End: Original strand, 21740935 - 21741029
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtataca 860  Q
    |||||| |||||||||||||  || ||||||||||||||||||| | | ||||||||||   | |||| | |||||||||| |||||| ||||||    
T  21740935 aaaagagcaatgttctatttgtattttttaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactaccatataca 21741029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 766 - 864
Target Start/End: Complemental strand, 50146411 - 50146313
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||||||||||||||||||||  |||| |||||||||| ||| | | ||| |||||||  |  ||| |||||| ||||||| |||| ||||||||||    
T  50146411 aaaagaacaatgttctatttaaactttttgaaagataaatgcaaggtgccgtgtatatgtgatagacccaaaggtaaaaatcattaccctatacatgag 50146313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 773 - 867
Target Start/End: Original strand, 13913485 - 13913581
Alignment:
Q  773 caatgttctatttaaatcttttaaaagataaatacaaagcgtcg--tatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaa 867  Q
    ||||| |||||||| || |||||||||||||||| ||   | ||  ||||||||  || |||||||| |||||||| ||||||||||||||||||||    
T  13913485 caatgatctatttatattttttaaaagataaatataagttgccgggtatatatgcggtacacctaaaagtgaaaatgactaccgtatacatgagaaa 13913581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 766 - 809
Target Start/End: Original strand, 17322621 - 17322664
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaa 809  Q
    ||||||||||||||||||||| || |||| ||||||||||||||    
T  17322621 aaaagaacaatgttctatttatatttttttaaagataaatacaa 17322664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 766 - 809
Target Start/End: Original strand, 22865459 - 22865502
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaa 809  Q
    |||||| |||||||||||||| || |||||||||||||||||||    
T  22865459 aaaagagcaatgttctatttatattttttaaaagataaatacaa 22865502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 711 - 856
Target Start/End: Complemental strand, 35392437 - 35392295
Alignment:
Q  711 ctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatcttttaaaagataaatacaaa 810  Q
    |||| ||||||||||||||| | ||| ||||||||||||||||  |         ||||||| |||||| ||||||||| ||||||  |||||||||||     
T  35392437 ctcgactctgtaagtgaaaaaatgtccataataaaataaaaat--atttttttttaaaagaataatgttttatttaaattttttaag-gataaatacaag 35392341  T
Q  811 gcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgta 856  Q
    | | ||||||||||  ||  | | ||||||||||||||||||||||    
T  35392340 gtgccgtatatatgcggtatatccaaaggtgaaaatcactaccgta 35392295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 774 - 864
Target Start/End: Original strand, 51607445 - 51607536
Alignment:
Q  774 aatgttctatttaaatcttttaaaagataaatacaaagcgtc-gtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||| || |||||||||||||||| || | | | |||||||||  || |||| ||| |||||||| |||||||||||||||||    
T  51607445 aatgttttatttatattttttaaaagataaatataaggtggccgtatatatgcggtacacccaaacgtgaaaatgactaccgtatacatgag 51607536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 5e-37; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 697 - 884
Target Start/End: Complemental strand, 52468462 - 52468277
Alignment:
Q  697 tacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatcttttaa 796  Q
    |||||||  ||| ||||||||||||| |||||||||||||| |||||||||||||| |||         |||||||||||||||||||||||| ||||||    
T  52468462 tacgaattcggaggctcggctctgtaggtgaaaagaggtctgtaataaaataaaaacgtattttttt--aaaagaacaatgttctatttaaattttttaa 52468365  T
Q  797 aagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccaccatccc 884  Q
    ||||||||||||| | | |||||||||||| | || | ||||||||||||||||||||||| |||||| ||  |||||||||| ||||    
T  52468364 aagataaatacaaggtgccgtatatatgttatacatccaaaggtgaaaatcactaccgtatgcatgaggaacctcaaaccaccttccc 52468277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 697 - 864
Target Start/End: Original strand, 36118389 - 36118554
Alignment:
Q  697 tacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatcttttaa 796  Q
    |||||||  |||||||||||| ||||||||||||||||    |||||||||||||| |||         ||| |||||||||||||||||||| ||||||    
T  36118389 tacgaattcggaagctcggctttgtaagtgaaaagaggctcgtaataaaataaaaacgtattttttt--aaatgaacaatgttctatttaaattttttaa 36118486  T
Q  797 aagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    ||||||||||||| | |||||||||||||  | |||| |||  |||||||||||||||||||||||||    
T  36118487 aagataaatacaaggtgtcgtatatatgtgatacacccaaatatgaaaatcactaccgtatacatgag 36118554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 697 - 884
Target Start/End: Original strand, 39329322 - 39329508
Alignment:
Q  697 tacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatcttttaa 796  Q
    ||||||| |||| |||||| ||||||||||||||||||||  ||||||||||||||  ||         |||||||||||||||| ||||||| ||||||    
T  39329322 tacgaatttggaggctcggttctgtaagtgaaaagaggtccgtaataaaataaaaacatatttttttt-aaaagaacaatgttctctttaaattttttaa 39329420  T
Q  797 aagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccaccatccc 884  Q
    ||||||||||||| | || ||||||||||  | |||| |||| ||||||||  ||||||||||| ||| || ||||||||||| ||||    
T  39329421 aagataaatacaaggtgttgtatatatgtgatacacccaaagatgaaaatccataccgtatacaggaggaacatcaaaccaccctccc 39329508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 766 - 864
Target Start/End: Complemental strand, 54780886 - 54780788
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||| |||||||||||| |||||||||||||||||    
T  54780886 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 54780788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 766 - 867
Target Start/End: Complemental strand, 32128693 - 32128592
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgaga 865  Q
    |||||| |||||||||||||| || |||||||||||||||| || | ||||||||||||  || |||| |||||||||||| |||||||||||||| |||    
T  32128693 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacataaga 32128594  T
Q  866 aa 867  Q
    ||    
T  32128593 aa 32128592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 717 - 860
Target Start/End: Original strand, 10041949 - 10042092
Alignment:
Q  717 tctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcg 816  Q
    ||||||||||||||||||||  || ||||||||||  |||         |||||||||||||||||||||||| ||| |||| |||||||||| | | ||    
T  10041949 tctgtaagtgaaaagaggtccgtagtaaaataaaagcgtatttttttttaaaagaacaatgttctatttaaatttttaaaaaaataaatacaaggtgccg 10042048  T
Q  817 tatatatgttgtgcacctaaaggtgaaaatcactaccgtataca 860  Q
    ||| |||||  | |||||||| ||||||||||||||||||||||    
T  10042049 tatgtatgtgatacacctaaatgtgaaaatcactaccgtataca 10042092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 685 - 848
Target Start/End: Original strand, 39655171 - 39655334
Alignment:
Q  685 tagggtcattcttacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatt 784  Q
    ||||||| ||| ||| |||||||| ||||| ||||||| |||||||||||    |||||||||||||| ||          |||||||||||||||||||    
T  39655171 tagggtcgttcctacaaatctggaggctcgactctgtaggtgaaaagaggctcgtaataaaataaaaacgttctatttttaaaaagaacaatgttctatt 39655270  T
Q  785 taaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatca 848  Q
    ||||| |||||||||||||||||||||   || |||||||  || |||| ||||||||||||||    
T  39655271 taaattttttaaaagataaatacaaagttccgcatatatgcggtacacccaaaggtgaaaatca 39655334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 701 - 884
Target Start/End: Complemental strand, 27112202 - 27112021
Alignment:
Q  701 aatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatcttttaaaaga 800  Q
    |||||||| |||||| |||||||||||||||||  |  ||||||||||| | ||||         ||| ||||||||||| |||||||| ||||||||||    
T  27112202 aatctggaggctcggttctgtaagtgaaaagagacccgtaataaaataagattgtattttttt--aaacgaacaatgttcaatttaaattttttaaaaga 27112105  T
Q  801 taaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccaccatccc 884  Q
    ||||||||| | | | ||||||||   | |||| ||| |||||||||||||||||||||||||| ||  |||||||||| ||||    
T  27112104 taaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaaccaccctccc 27112021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 766 - 864
Target Start/End: Original strand, 2790739 - 2790837
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    ||||||||||||||||||||| || |||||||||||||||| || |   ||||||||||  || |||| |||||||||||| |||||||||||||||||    
T  2790739 aaaagaacaatgttctatttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 2790837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 766 - 864
Target Start/End: Complemental strand, 10979009 - 10978911
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | ||||||||||||  || |||| | | |||||||| |||||||||||||||||    
T  10979009 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaagtgaaaatgactaccgtatacatgag 10978911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 769 - 863
Target Start/End: Complemental strand, 36178778 - 36178684
Alignment:
Q  769 agaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatga 863  Q
    |||||||||||||||||||||  |||||||||||||||||| | ||||||||||||   | |||| ||| ||||||||||||||| |||||||||    
T  36178778 agaacaatgttctatttaaattatttaaaagataaatacaaggtgtcgtatatatgcgatacacccaaatgtgaaaatcactaccttatacatga 36178684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 766 - 864
Target Start/End: Original strand, 43455529 - 43455627
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || |||||||||||||||| || | | ||||||||||  || |||| |||||||||||| |||||||||||||||||    
T  43455529 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 43455627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 766 - 864
Target Start/End: Complemental strand, 47129096 - 47128998
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    ||||||||||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||| | |||| ||||| |||||||||||||||||    
T  47129096 aaaagaacaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgag 47128998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 767 - 864
Target Start/End: Original strand, 38209590 - 38209687
Alignment:
Q  767 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    ||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||| | |||||||||| |||||||||||||||||    
T  38209590 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgag 38209687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 766 - 864
Target Start/End: Complemental strand, 16845131 - 16845032
Alignment:
Q  766 aaaagaacaatgttctatttaaatctttt-aaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || |||| |||||||||||| || | ||||||||||||| || |||| || ||||||||| |||||||||||||||||    
T  16845131 aaaagagcaatgttctatttatatttttttaaaagataaatataaggtgtcgtatatatgtagtacacccaacggtgaaaatgactaccgtatacatgag 16845032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 710 - 864
Target Start/End: Complemental strand, 24397099 - 24396945
Alignment:
Q  710 gctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatcttttaaaagataaatacaa 809  Q
    |||| |||||||||||||||||||   | |||||||||||||| |||         ||||||||||| || ||||||||| |||||||||||||||| ||    
T  24397099 gctcagctctgtaagtgaaaagagacatgtaataaaataaaaacgtatttttttttaaaagaacaatattttatttaaattttttaaaagataaatataa 24397000  T
Q  810 agcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
     | |  ||||||||||  | |||  ||||||||||||||||| ||||||||||||    
T  24396999 ggtgcagtatatatgtgatacactcaaaggtgaaaatcactatcgtatacatgag 24396945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 773 - 864
Target Start/End: Complemental strand, 34027681 - 34027590
Alignment:
Q  773 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||||||||||| || |||||||||||||||| || | ||||||||||||  || |||| |||||||||||| ||||| |||||||||||    
T  34027681 caatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactacggtatacatgag 34027590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 778 - 864
Target Start/End: Original strand, 5128852 - 5128938
Alignment:
Q  778 ttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    ||||||||| || ||||||||||||||||||| | | ||||||||||  ||||||| | |||||||||| |||||||||||||||||    
T  5128852 ttctatttatattttttaaaagataaatacaaggtgccgtatatatgcagtgcacccagaggtgaaaatgactaccgtatacatgag 5128938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 774 - 864
Target Start/End: Original strand, 37777229 - 37777319
Alignment:
Q  774 aatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    ||||||||||||| || |||||||||||||||| || | | ||||||||||  || |||| |||||||||||| |||||||||||||||||    
T  37777229 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 37777319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 775 - 864
Target Start/End: Complemental strand, 1105632 - 1105543
Alignment:
Q  775 atgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||||||||| || ||||||||||||||||||| |  |||||||||||  || |||||| |||||||||| |||||| ||||||||||    
T  1105632 atgttctatttatattttttaaaagataaatacaaggtatcgtatatatgcggtacacctagaggtgaaaatgactaccatatacatgag 1105543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 767 - 864
Target Start/End: Original strand, 35779325 - 35779421
Alignment:
Q  767 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    ||||| |||||||||||| | || ||||||||||||||||||| | ||||||||||||  || |||| |||||||||||| | |||||||||||||||    
T  35779325 aaagagcaatgttctatt-atattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgag 35779421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 766 - 867
Target Start/End: Complemental strand, 48209349 - 48209248
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgaga 865  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||| | | ||||| || ||||||||||||||||||    
T  48209349 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagatgtgaatatgactaccgtatacatgaga 48209250  T
Q  866 aa 867  Q
    ||    
T  48209249 aa 48209248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 705 - 787
Target Start/End: Complemental strand, 5893181 - 5893099
Alignment:
Q  705 tggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaa 787  Q
    |||| |||||||||||||||||||||||||||  ||||||||||||||||||         ||||||||||||||||||||||    
T  5893181 tggaggctcggctctgtaagtgaaaagaggtccgtaataaaataaaaatgtatttttttttaaaagaacaatgttctatttaa 5893099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 766 - 861
Target Start/End: Original strand, 36362869 - 36362964
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacat 861  Q
    |||||||||||| ||| ||||||| ||||||||||||||||||||| | ||||||||||   | |||| ||| ||| ||||||||||| |||||||    
T  36362869 aaaagaacaatgctctgtttaaattttttaaaagataaatacaaagtgccgtatatatgcaatacacccaaatgtggaaatcactaccatatacat 36362964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 769 - 879
Target Start/End: Complemental strand, 15735196 - 15735091
Alignment:
Q  769 agaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaat 868  Q
    |||||| |||||||||||||| |||||||||||||||||||  |||||||||||     | |||| |||  ||||||||| ||||||||||||||| ||     
T  15735196 agaacagtgttctatttaaattttttaaaagataaatacaagacgtcgtatata-----tacaccaaaaaatgaaaatcattaccgtatacatgaggaac 15735102  T
Q  869 atcaaaccacc 879  Q
     ||||||||||    
T  15735101 ttcaaaccacc 15735091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 693 - 809
Target Start/End: Complemental strand, 24614135 - 24614019
Alignment:
Q  693 ttcttacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnna-aaagaacaatgttctatttaaatct 791  Q
    |||||||||||||||| | || |||||||||||||||||||| |  ||||||||||||| ||||           ||||||||||||||||||||||| |    
T  24614135 ttcttacgaatctggaggttcagctctgtaagtgaaaagaggcccgtaataaaataaaa-tgtatttttttttttaaagaacaatgttctatttaaattt 24614037  T
Q  792 tttaaaagataaatacaa 809  Q
    ||||||||||||||||||    
T  24614036 tttaaaagataaatacaa 24614019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 686 - 808
Target Start/End: Original strand, 30507038 - 30507162
Alignment:
Q  686 agggtcattcttacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnn--aaaagaacaatgttctat 783  Q
    |||||| ||| |||||||| ||| |||||  | |||||||||||||||  | |||||||||||||||||||           ||||||||||||||||||    
T  30507038 agggtcgttcctacgaatccggaggctcgattttgtaagtgaaaagagacccataataaaataaaaatgtatttttttttttaaaagaacaatgttctat 30507137  T
Q  784 ttaaatcttttaaaagataaataca 808  Q
    |||||| ||||||||||||||||||    
T  30507138 ttaaattttttaaaagataaataca 30507162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 766 - 864
Target Start/End: Complemental strand, 32915494 - 32915396
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| | |||||||||||| || ||||||||||||||||||| | | ||||||||||| || |||| | |||| ||||| | |||||||||||||||    
T  32915494 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtaaaaatgattaccgtatacatgag 32915396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 766 - 864
Target Start/End: Original strand, 34768572 - 34768670
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || |||||||||||||||| || | | ||||||||||  || |||| | |||||||||| | |||||||||||||||    
T  34768572 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccagaggtgaaaatgattaccgtatacatgag 34768670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 766 - 864
Target Start/End: Complemental strand, 35465215 - 35465118
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||||||||||| |||||| || ||||| |||||||||| || | | ||||||||||  || |||||||| |||||||| |||||||||||||||||    
T  35465215 aaaagaacaatgttatatttatattttttacaagataaataaaaggtg-cgtatatatgcggtacacctaaaagtgaaaataactaccgtatacatgag 35465118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 766 - 860
Target Start/End: Original strand, 51691913 - 51692009
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacc--taaaggtgaaaatcactaccgtataca 860  Q
    |||||| ||||||||||||||||| ||||||||||||||||||| | | ||||||||||  || ||||   ||| ||||||||||||||| ||||||    
T  51691913 aaaagagcaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgcggtacaccaaaaaaagtgaaaatcactaccatataca 51692009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 775 - 863
Target Start/End: Complemental strand, 37514759 - 37514671
Alignment:
Q  775 atgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatga 863  Q
    |||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||  | |||||||||| ||||||||||||||||    
T  37514759 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatga 37514671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 766 - 824
Target Start/End: Original strand, 16922327 - 16922385
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatg 824  Q
    |||||| |||||||||||||| || |||||||||||||||| |||| ||||||||||||    
T  16922327 aaaagagcaatgttctatttatattttttaaaagataaatataaagtgtcgtatatatg 16922385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 775 - 880
Target Start/End: Original strand, 37744916 - 37745022
Alignment:
Q  775 atgttctatttaaatctttt-aaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaatatcaa 873  Q
    ||||||||||||||| |||| |||||||||||| || | |||| |||||||   | || | ||||||||||||||||||||||||| |||| ||  ||||    
T  37744916 atgttctatttaaatttttttaaaagataaatataaggtgtcgcatatatgcgatacatccaaaggtgaaaatcactaccgtatacttgaggaacctcaa 37745015  T
Q  874 accacca 880  Q
    |||||||    
T  37745016 accacca 37745022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 766 - 864
Target Start/End: Original strand, 54083240 - 54083338
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||| ||||||| |||||||| || |||||||||||||||| || | | ||||||||||  || |||| |||| | ||||| |||||||||||||||||    
T  54083240 aaaaaaacaatgatctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaagataaaaatgactaccgtatacatgag 54083338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 771 - 824
Target Start/End: Original strand, 2135324 - 2135377
Alignment:
Q  771 aacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatg 824  Q
    |||||| |||||||||||| ||||||||||||||||||| | ||||||||||||    
T  2135324 aacaatattctatttaaattttttaaaagataaatacaaggtgtcgtatatatg 2135377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 791 - 864
Target Start/End: Original strand, 4167914 - 4167987
Alignment:
Q  791 ttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    ||||||||||||||||||| | | ||||||||||   | |||| ||||||||||||||||||| ||||||||||    
T  4167914 ttttaaaagataaatacaaggtgccgtatatatgcgatacacccaaaggtgaaaatcactaccttatacatgag 4167987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 776 - 861
Target Start/End: Complemental strand, 13460306 - 13460221
Alignment:
Q  776 tgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacat 861  Q
    ||||||||||| || ||||||||||||||||||| | ||||||||||||  ||  ||| | | |||||||| ||||||||||||||    
T  13460306 tgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtatacccagatgtgaaaatgactaccgtatacat 13460221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 791 - 864
Target Start/End: Complemental strand, 40089600 - 40089527
Alignment:
Q  791 ttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||||||||||||| || | | ||||||||||  || || | |||||||||||| |||||||||||||||||    
T  40089600 ttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgag 40089527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 766 - 809
Target Start/End: Original strand, 9578662 - 9578705
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaa 809  Q
    |||||| |||||||||||||| || |||||||||||||||||||    
T  9578662 aaaagagcaatgttctatttatattttttaaaagataaatacaa 9578705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 773 - 824
Target Start/End: Original strand, 10428202 - 10428253
Alignment:
Q  773 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatg 824  Q
    |||||||||||||| || ||||||||||||||||||| | | ||||||||||    
T  10428202 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatg 10428253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 766 - 857
Target Start/End: Original strand, 16882393 - 16882484
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtat 857  Q
    |||| |||||||||||||||| |  |||||||||||||||| || | | ||| |||||   || |||| |||||||||||| ||||||||||    
T  16882393 aaaaaaacaatgttctatttatactttttaaaagataaatataaggtgccgtgtatatacggtacaccaaaaggtgaaaatgactaccgtat 16882484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 780 - 879
Target Start/End: Complemental strand, 40217327 - 40217228
Alignment:
Q  780 ctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccacc 879  Q
    |||||||||| |||||||||||||||| || | ||||||||||||   | || | |||| ||||||||| || | |||||||||| ||  ||||||||||    
T  40217327 ctatttaaattttttaaaagataaatataaggtgtcgtatatatgcgatacatccaaagatgaaaatcattagcatatacatgagtaacctcaaaccacc 40217228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 766 - 824
Target Start/End: Complemental strand, 17679509 - 17679451
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatg 824  Q
    |||||| |||| ||||||||| || ||||||||||||||||||| | | ||||||||||    
T  17679509 aaaagagcaatattctatttatattttttaaaagataaatacaaggtgccgtatatatg 17679451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 773 - 821
Target Start/End: Original strand, 23508515 - 23508564
Alignment:
Q  773 caatgttctattta-aatcttttaaaagataaatacaaagcgtcgtatat 821  Q
    |||||||||||||| ||| ||||||||||||||||||| | |||||||||    
T  23508515 caatgttctatttataattttttaaaagataaatacaaggtgtcgtatat 23508564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 771 - 824
Target Start/End: Complemental strand, 45656279 - 45656226
Alignment:
Q  771 aacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatg 824  Q
    ||||||||| ||||||||| ||||||||||||||| ||| | ||| ||||||||    
T  45656279 aacaatgttttatttaaattttttaaaagataaatgcaaggtgtcatatatatg 45656226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 2e-36; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 686 - 884
Target Start/End: Complemental strand, 10407644 - 10407447
Alignment:
Q  686 agggtcattcttacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctattt 785  Q
    |||||| ||| ||||||||| || | |||| ||| |||||||||||||||| ||||||||||||||| |||         ||||||||||||||||||||    
T  10407644 agggtcgttcctacgaatctagaggttcggttctataagtgaaaagaggtccataataaaataaaaaagtatttttttt-aaaagaacaatgttctattt 10407546  T
Q  786 aaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccaccatccc 884  Q
    |||| |||||||||||||| |||| | |||||| ||||||||| || ||||| |||||||| |||||||||| |||||| ||| || ||||||||||||    
T  10407545 aaattttttaaaagataaacacaaggtgtcgtacatatgttgtacatctaaaagtgaaaattactaccgtatgcatgaggaatctccaaccaccatccc 10407447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 766 - 884
Target Start/End: Original strand, 36868872 - 36868990
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgaga 865  Q
    |||||||||||||||||||||| | ||||||||||||||||||| | ||||||||||||| || |||| ||| ||||||||||||||||||||||||||     
T  36868872 aaaagaacaatgttctatttaatttttttaaaagataaatacaaggtgtcgtatatatgtggtacacccaaatgtgaaaatcactaccgtatacatgagg 36868971  T
Q  866 aatatcaaaccaccatccc 884  Q
    ||| |||||||||| ||||    
T  36868972 aatctcaaaccaccctccc 36868990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 697 - 879
Target Start/End: Original strand, 40794254 - 40794436
Alignment:
Q  697 tacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatcttttaa 796  Q
    |||||||  ||| |||||||||||||||||||||||||    |||||||||||||| ||          |||||||||||||| ||||||||| ||||||    
T  40794254 tacgaattcggaggctcggctctgtaagtgaaaagaggctcgtaataaaataaaaacgtttttttttttaaaagaacaatgttttatttaaattttttaa 40794353  T
Q  797 aagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccacc 879  Q
    |||| |||||||||| | |||| |||| |  | |||| |||||||||||||||||||||||||||||||||  ||||||||||    
T  40794354 aagacaaatacaaagagccgtaaatatatgatacaccaaaaggtgaaaatcactaccgtatacatgagaaacctcaaaccacc 40794436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 766 - 883
Target Start/End: Complemental strand, 33037884 - 33037767
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgaga 865  Q
    |||||||||||||| ||||||||| |||||||||||||||||||    ||||||||||||||| |||| ||||||||||| || |||||||||||||||     
T  33037884 aaaagaacaatgttttatttaaattttttaaaagataaatacaagatatcgtatatatgttgtacacccaaaggtgaaaaccattaccgtatacatgagg 33037785  T
Q  866 aatatcaaaccaccatcc 883  Q
    ||  ||||||||||||||    
T  33037784 aacctcaaaccaccatcc 33037767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 697 - 884
Target Start/End: Complemental strand, 34426075 - 34425889
Alignment:
Q  697 tacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatcttttaa 796  Q
    |||||||||| | |||||| |||||||||||||| ||   | ||||||||||||||||||         |||||||||||||||||||| ||| ||||||    
T  34426075 tacgaatctgaaggctcggttctgtaagtgaaaaaagacatgtaataaaataaaaatgtatctttttt-aaaagaacaatgttctatttcaattttttaa 34425977  T
Q  797 aagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccaccatccc 884  Q
    ||||||||||||| | | |||||||||||  | ||||||||| | ||||||| ||||||||||||||| ||  |||||||||| ||||    
T  34425976 aagataaatacaaggtgccgtatatatgtgatacacctaaagattaaaatcattaccgtatacatgaggaacctcaaaccaccctccc 34425889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 767 - 884
Target Start/End: Complemental strand, 2412191 - 2412074
Alignment:
Q  767 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaa 866  Q
    ||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||   |||| | ||| |||||||||||||| ||||||||||| |    
T  2412191 aaagaacaatgttctatttaaattttttaaaaaataaatacaaagtgtcgtatatatgcgatgcatccaaatgtgaaaatcactactgtatacatgagga 2412092  T
Q  867 atatcaaaccaccatccc 884  Q
    |  |||||||||| ||||    
T  2412091 acctcaaaccaccctccc 2412074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 767 - 879
Target Start/End: Original strand, 14318382 - 14318494
Alignment:
Q  767 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaa 866  Q
    ||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||  | || | |||  ||||||||||||||||||||||||| |    
T  14318382 aaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacatccaaaaatgaaaatcactaccgtatacatgagga 14318481  T
Q  867 atatcaaaccacc 879  Q
    |  ||||||||||    
T  14318482 acctcaaaccacc 14318494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 697 - 879
Target Start/End: Original strand, 2530826 - 2531006
Alignment:
Q  697 tacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatcttttaa 796  Q
    |||||||||| | | | ||||||||||||||||||||| |  ||||||||||||||||||         ||||||| |||||||||||||| | ||||||    
T  2530826 tacgaatctgaaggtttggctctgtaagtgaaaagaggcccgtaataaaataaaaatgtatttttctt-aaaagaa-aatgttctatttaagttttttaa 2530923  T
Q  797 aagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccacc 879  Q
    ||||||||||||| | |||||||||||   || || | |||||||||||||||||| ||||||||||| ||  ||||||||||    
T  2530924 aagataaatacaatgtgtcgtatatatacggtacatccaaaggtgaaaatcactactgtatacatgaggaacctcaaaccacc 2531006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 766 - 867
Target Start/End: Original strand, 38869359 - 38869460
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgaga 865  Q
    |||||| |||||||||||||| || |||||||||||||||| || | ||||||||||||  || |||| |||||||||||| ||||||||||||||||||    
T  38869359 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaga 38869458  T
Q  866 aa 867  Q
    ||    
T  38869459 aa 38869460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 768 - 879
Target Start/End: Original strand, 22648734 - 22648845
Alignment:
Q  768 aagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaa 867  Q
    |||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||| |  || | |||||||| ||||||||| ||||| || |||||    
T  22648734 aagaacaatgttctatttaaattttttaaaagataaatacaatgtgtcgtatatatgtggcacatccaaaggtgacaatcactactgtataaataagaaa 22648833  T
Q  868 tatcaaaccacc 879  Q
      ||||||||||    
T  22648834 cctcaaaccacc 22648845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 766 - 864
Target Start/End: Original strand, 2024638 - 2024736
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||||||||||||||||||||| |||| |||||||||||||| | | |||||||||||  | |||| |||| |||||||||||||| ||||||||||    
T  2024638 aaaagaacaatgttctatttaaatttttttaaagataaatacaatgtgccgtatatatgtgatacacccaaagatgaaaatcactaccatatacatgag 2024736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 686 - 884
Target Start/End: Original strand, 11242236 - 11242432
Alignment:
Q  686 agggtcattcttacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctattt 785  Q
    |||||| ||| || ||||| ||| ||||||||||||||||||||||||     |||||||||||||| |||         ||||||||||||||||||||    
T  11242236 agggtcgttcctatgaatccggaggctcggctctgtaagtgaaaagagactcgtaataaaataaaaacgtattctttt--aaaagaacaatgttctattt 11242333  T
Q  786 aaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccaccatccc 884  Q
    || | ||||||||||||||||||||  |  ||||||||||  | || | |||| || |||||||||||||||||||||| ||  |||||||||| ||||    
T  11242334 aatttttttaaaagataaatacaaaatgatgtatatatgtgatacaaccaaagatggaaatcactaccgtatacatgaggaacctcaaaccaccctccc 11242432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 766 - 864
Target Start/End: Complemental strand, 27079115 - 27079017
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || ||||||||||||||||| ||||| |||||||||||    
T  27079115 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctaaaggtgaaaatgactactgtatacatgag 27079017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 766 - 867
Target Start/End: Original strand, 22986554 - 22986655
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgaga 865  Q
    |||||| |||||||||||| | || |||||||||| |||||||||| ||||||||||||  || |||| | |||||||||| ||||||||||||||||||    
T  22986554 aaaagagcaatgttctattaatattttttaaaagacaaatacaaagtgtcgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgaga 22986653  T
Q  866 aa 867  Q
    ||    
T  22986654 aa 22986655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 767 - 864
Target Start/End: Original strand, 26718946 - 26719043
Alignment:
Q  767 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||||  ||||||||||||||||||||| ||||||||||||   | |||  |||||||||||||||||||| |||||||||    
T  26718946 aaagaataatgttctatttaaaatttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgag 26719043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 767 - 864
Target Start/End: Original strand, 26988690 - 26988787
Alignment:
Q  767 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||||  ||||||||||||||||||||| ||||||||||||   | |||  |||||||||||||||||||| |||||||||    
T  26988690 aaagaataatgttctatttaaaatttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgag 26988787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 766 - 864
Target Start/End: Original strand, 1366522 - 1366620
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||||||||||||||||||||| ||||| |||||||||||||   || |||||||||   | |||||||| |||||||||||||||||||| |||||    
T  1366522 aaaagaacaatgttctatttaaattttttataagataaatacaagatgtggtatatatgcgatacacctaaatgtgaaaatcactaccgtatatatgag 1366620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 766 - 864
Target Start/End: Original strand, 34756362 - 34756460
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||| | |||||||||| |||||||||||||||||    
T  34756362 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgag 34756460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 766 - 863
Target Start/End: Original strand, 28822338 - 28822435
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatga 863  Q
    |||||| |||||||||||||| || |||||||||||||||| || | | ||||||||||  || |||| |||||||||||| ||||||||||||||||    
T  28822338 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatga 28822435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 767 - 846
Target Start/End: Complemental strand, 7338102 - 7338023
Alignment:
Q  767 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaat 846  Q
    ||||| |||||||||||||| || ||||||||||||||||||| | ||||||||||||  || |||||||||||||||||    
T  7338102 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacctaaaggtgaaaat 7338023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 773 - 864
Target Start/End: Complemental strand, 9364388 - 9364297
Alignment:
Q  773 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||||||||||| || |||||||||||||||| || | | ||||||||||  || |||| |||||||||||| |||||||||||||||||    
T  9364388 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 9364297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 773 - 864
Target Start/End: Original strand, 16198797 - 16198888
Alignment:
Q  773 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||||||||||| || |||||||||||||||| || | ||||||||||||   | |||| |||||||||||| |||||||||||||||||    
T  16198797 caatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgag 16198888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 766 - 867
Target Start/End: Original strand, 36187875 - 36187976
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgaga 865  Q
    |||||| | |||||||||||| || |||||||| |||||||||| | | ||||||||||  || |||| | |||||||||| ||||||||||||||||||    
T  36187875 aaaagagcgatgttctatttatattttttaaaatataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaga 36187974  T
Q  866 aa 867  Q
    ||    
T  36187975 aa 36187976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 766 - 860
Target Start/End: Complemental strand, 2274994 - 2274900
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtataca 860  Q
    |||||| | |||||||||||| || ||||||||||||||||||| |  |||||||||||  || |||| | |||||||||| |||||||||||||    
T  2274994 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtatcgtatatatgcagtacacccagaggtgaaaatgactaccgtataca 2274900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 766 - 864
Target Start/End: Original strand, 16592070 - 16592168
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || || |||||||||||||||  | ||||||||||||  || |||| | |||||||||| ||||||||||| |||||    
T  16592070 aaaagagcaatgttctatttatattttctaaaagataaatacagggtgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatatatgag 16592168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 766 - 864
Target Start/End: Original strand, 23284058 - 23284156
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || |||||||   ||||||||| | ||||||||||||  || |||| |||| ||||||| |||||||||||||||||    
T  23284058 aaaagagcaatgttctatttatattttttaaagactaaatacaaggtgtcgtatatatgcggtacacccaaagatgaaaatgactaccgtatacatgag 23284156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 766 - 864
Target Start/End: Complemental strand, 30854433 - 30854335
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||  | |||||||||| |||| ||||||||||||    
T  30854433 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactatcgtatacatgag 30854335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 766 - 864
Target Start/End: Original strand, 31194608 - 31194705
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  ||  ||| | |||||||||| |||||||||||||||||    
T  31194608 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtaaacccagaggtgaaaat-actaccgtatacatgag 31194705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 775 - 864
Target Start/End: Original strand, 15480094 - 15480183
Alignment:
Q  775 atgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||||||||| || |||||||||||||||||||   ||||||||||||  || |||| | |||||||||| |||||||||| ||||||    
T  15480094 atgttctatttatattttttaaaagataaatacaagatgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatgcatgag 15480183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 776 - 864
Target Start/End: Complemental strand, 19523293 - 19523205
Alignment:
Q  776 tgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    ||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||| | |||||||||| |||||| ||||||||||    
T  19523293 tgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgag 19523205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 773 - 857
Target Start/End: Original strand, 40389539 - 40389623
Alignment:
Q  773 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtat 857  Q
    |||||||||||||| || |||||||||||||||| || | ||||||||||||  || || | |||||||||||| ||||||||||    
T  40389539 caatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtat 40389623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 766 - 809
Target Start/End: Complemental strand, 606258 - 606215
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaa 809  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  606258 aaaagaacaatgttctatttaaattttttaaaagataaatacaa 606215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 774 - 864
Target Start/End: Original strand, 16799331 - 16799421
Alignment:
Q  774 aatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    ||||||||||||| || |||||||| ||||||| || | | ||||||||||  || |||| |||||||||||| | |||||||||||||||    
T  16799331 aatgttctatttatattttttaaaaaataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgag 16799421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 774 - 864
Target Start/End: Complemental strand, 24395835 - 24395745
Alignment:
Q  774 aatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||||||||||||| ||||||||||||||||||| | || ||||||||    | || | ||||||||||||||| |||||||| |||||    
T  24395835 aatgttctatttaaattttttaaaagataaatacaaggtgttgtatatatacaatacatccaaaggtgaaaatcaccaccgtatagatgag 24395745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 697 - 806
Target Start/End: Original strand, 35080700 - 35080806
Alignment:
Q  697 tacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatcttttaa 796  Q
    ||||||||| || ||||| ||||||||||||||||||| |  ||||||||||||||| |          |||||||||||||| ||||||||| ||||||    
T  35080700 tacgaatctagaggctcgactctgtaagtgaaaagagggccgtaataaaataaaaatat---tttttttaaaagaacaatgttttatttaaattttttaa 35080796  T
Q  797 aagataaata 806  Q
    ||||||||||    
T  35080797 aagataaata 35080806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 767 - 884
Target Start/End: Complemental strand, 10543776 - 10543660
Alignment:
Q  767 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaa 866  Q
    |||||| ||||||| | |||||| |||||||||||||||| || | |  |||||||||   | || | ||||||||||||||||||||||||||| || |    
T  10543776 aaagaataatgttccacttaaattttttaaaagataaatataaggtgatgtatatatgcgatacatccaaaggtgaaaatcactaccgtatacat-agga 10543678  T
Q  867 atatcaaaccaccatccc 884  Q
    || |||||||||| ||||    
T  10543677 atctcaaaccaccctccc 10543660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 766 - 809
Target Start/End: Complemental strand, 27530587 - 27530544
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaa 809  Q
    |||||||||||||||||||||||| ||||||||||| |||||||    
T  27530587 aaaagaacaatgttctatttaaattttttaaaagattaatacaa 27530544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 767 - 864
Target Start/End: Original strand, 41911614 - 41911711
Alignment:
Q  767 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||||||||||| | |||| | |||||||||| |||||||| | |||||||||| |  || |||| ||| || |||||||||| |||||| |||||    
T  41911614 aaagaacaatgttcaacttaatttttttaaaagagaaatacaaggtgtcgtatataagcggtacacccaaaagtaaaaatcactatcgtatatatgag 41911711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 773 - 864
Target Start/End: Complemental strand, 7671022 - 7670930
Alignment:
Q  773 caatgttctatttaaatctttt-aaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||||||||||| || |||| |||||||||||| || | | ||||||| |   || |||| |||||||||||| |||||||||||||||||    
T  7671022 caatgttctatttatatttttttaaaagataaatataaggtgccgtatatttacggtacacccaaaggtgaaaatgactaccgtatacatgag 7670930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 771 - 811
Target Start/End: Complemental strand, 22875041 - 22875001
Alignment:
Q  771 aacaatgttctatttaaatcttttaaaagataaatacaaag 811  Q
    |||||| |||||||||||| |||||||||||||||||||||    
T  22875041 aacaatattctatttaaattttttaaaagataaatacaaag 22875001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 780 - 864
Target Start/End: Complemental strand, 27924172 - 27924088
Alignment:
Q  780 ctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    ||||||| || |||||||||||||||| || | | ||||||||||  || || | |||||| ||||| |||||||||||||||||    
T  27924172 ctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtaaaaatgactaccgtatacatgag 27924088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 766 - 808
Target Start/End: Original strand, 31881430 - 31881472
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaataca 808  Q
    |||||| |||||||||||||| || ||||||||||||||||||    
T  31881430 aaaagagcaatgttctatttatattttttaaaagataaataca 31881472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 7e-36; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 688 - 881
Target Start/End: Complemental strand, 16097188 - 16096996
Alignment:
Q  688 ggtcattcttacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaa 787  Q
    |||| ||| ||||||| |||| |||||||||||||||||||||| || |  |||||||||||| |||||         ||||||||||||||||||||||    
T  16097188 ggtcgttcctacgaatttggaggctcggctctgtaagtgaaaagtggcccgtaataaaataaatatgtattttgttt-aaaagaacaatgttctatttaa 16097090  T
Q  788 atcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccaccat 881  Q
    || ||||||||||||||||||| | | |||||||||| ||| |||| |||||||||||| |||||| |||||||||| ||  ||||||||||||    
T  16097089 attttttaaaagataaatacaaggtgccgtatatatgatgtacacccaaaggtgaaaattactaccttatacatgaggaacctcaaaccaccat 16096996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 697 - 864
Target Start/End: Original strand, 21665632 - 21665797
Alignment:
Q  697 tacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatcttttaa 796  Q
    |||||||||||| | ||||||||||||||||||||||  |  ||||||||||||||||||         |||||||||||||||||||||||| ||||||    
T  21665632 tacgaatctggagggtcggctctgtaagtgaaaagagacccgtaataaaataaaaatgtattttttt--aaaagaacaatgttctatttaaattttttaa 21665729  T
Q  797 aagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    ||||||||||||  | |||||||||||||  | || | ||| ||||||||||||||||||||||||||    
T  21665730 aagataaatacacggtgtcgtatatatgtgatacatcaaaatgtgaaaatcactaccgtatacatgag 21665797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 686 - 884
Target Start/End: Original strand, 24035465 - 24035662
Alignment:
Q  686 agggtcattcttacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctattt 785  Q
    |||||||||| |||||||| ||| |||||  | |||||||||||||| | |  |||||||||||||| |||         ||||||||||||||||||||    
T  24035465 agggtcattcctacgaatccggatgctcgattttgtaagtgaaaagatgcccgtaataaaataaaaacgtatttctttt-aaaagaacaatgttctattt 24035563  T
Q  786 aaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccaccatccc 884  Q
    |||| ||||||||||||||||||| | | |||||| |||   | ||||||||||||||||||||||||| ||||||||| |||  ||||||||| ||||    
T  24035564 aaattttttaaaagataaatacaaggtgccgtataaatgcgatacacctaaaggtgaaaatcactaccgcatacatgaggaatcgcaaaccaccctccc 24035662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 688 - 879
Target Start/End: Complemental strand, 38400978 - 38400788
Alignment:
Q  688 ggtcattcttacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaa 787  Q
    |||| |||||||||||| | ||| ||||||||||||||||||||||  |   |||||||||||||  ||         | ||||||||||||||||||||    
T  38400978 ggtcgttcttacgaatccgaaagttcggctctgtaagtgaaaagagacccgcaataaaataaaaacata-tattttttataagaacaatgttctatttaa 38400880  T
Q  788 atcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccacc 879  Q
    || ||||||||||||||||||| | ||| ||||||||   | ||   |||||||||||||||||||||||||||||| ||  ||||||||||    
T  38400879 attttttaaaagataaatacaaggtgtcatatatatgcgatacattcaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccacc 38400788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 766 - 864
Target Start/End: Complemental strand, 3155320 - 3155222
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| |||||||||| |||||||||||||||||    
T  3155320 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgag 3155222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 766 - 864
Target Start/End: Complemental strand, 6965110 - 6965012
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || ||||||||||||||||||||| | ||||||||||  || |||| | |||||||||| |||||||||||||||||    
T  6965110 aaaagagcaatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgag 6965012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 766 - 864
Target Start/End: Original strand, 12337447 - 12337545
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | ||| ||||||||| || |||| | |||||||||| |||||||||||||||||    
T  12337447 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcatatatatgtggtacacccagaggtgaaaatgactaccgtatacatgag 12337545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 766 - 864
Target Start/End: Original strand, 28425709 - 28425807
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||||  || |||| ||| ||||||||||||||| |||| |||||    
T  28425709 aaaagaacaatgttctatttaaaaattttaaaagataaatacaaggtgtcgtatatatgcagtacacccaaatgtgaaaatcactaccatatatatgag 28425807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 766 - 864
Target Start/End: Original strand, 29939861 - 29939959
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || ||||| ||||||||||||| | ||||||||||||  || |||| |||||||||||| |||||||||||||||||    
T  29939861 aaaagagcaatgttctatttatattttttacaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 29939959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 767 - 848
Target Start/End: Complemental strand, 42029247 - 42029166
Alignment:
Q  767 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatca 848  Q
    ||||||||||||||||||||||| |||||||||||||||| || | ||| |||| ||||||| |||||||||||||||||||    
T  42029247 aaagaacaatgttctatttaaattttttaaaagataaatataaggtgtcatatacatgttgtacacctaaaggtgaaaatca 42029166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 774 - 867
Target Start/End: Original strand, 8907086 - 8907179
Alignment:
Q  774 aatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaa 867  Q
    ||||||||||||| || ||||||||||||||||||| ||| ||||||||||  || |||| | |||| ||||| ||||||||||||||||||||    
T  8907086 aatgttctatttatattttttaaaagataaatacaaggcgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgagaaa 8907179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 767 - 864
Target Start/End: Original strand, 10762565 - 10762662
Alignment:
Q  767 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    ||||| |||||||||||||| || |||||||||||||||| || | |  |||||||||| || |||| |||||||||||| |||||||||||||||||    
T  10762565 aaagagcaatgttctatttatattttttaaaagataaatataaggtgcggtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgag 10762662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 767 - 884
Target Start/End: Original strand, 16227368 - 16227485
Alignment:
Q  767 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaa 866  Q
    |||||||||| |||||||||||| ||||||||||||||||||| | |||||||||||||  | |||| | || |||||||||||||  ||||||| || |    
T  16227368 aaagaacaattttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacaccgatagatgaaaatcactactatatacataagga 16227467  T
Q  867 atatcaaaccaccatccc 884  Q
    |  |||||||||| ||||    
T  16227468 acctcaaaccaccctccc 16227485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 771 - 864
Target Start/End: Complemental strand, 24410535 - 24410442
Alignment:
Q  771 aacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||||||||||||| || |||||||||||||||| || | | ||||||||||  || |||| |||||||||||| |||||||||||||||||    
T  24410535 aacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 24410442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 766 - 864
Target Start/End: Complemental strand, 9046133 - 9046034
Alignment:
Q  766 aaaagaacaatgttctatttaaatctttt-aaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    ||||||||||||||||||||| || |||| |||||||||||| || | | ||||||||||  || |||| |||||||||||| |||||||||||||||||    
T  9046133 aaaagaacaatgttctatttatatttttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 9046034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 766 - 864
Target Start/End: Complemental strand, 4505997 - 4505899
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||| | |||| ||||| |||||||||||||||||    
T  4505997 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgag 4505899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 766 - 884
Target Start/End: Original strand, 12134039 - 12134157
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgaga 865  Q
    |||||||||||||||||||||||   |||||||||||||||||| |   ||||||||||   | |||| ||| ||||||||||||||||||||||| ||     
T  12134039 aaaagaacaatgttctatttaaaaaatttaaaagataaatacaaggtaccgtatatatgcgatacacccaaaagtgaaaatcactaccgtatacattagg 12134138  T
Q  866 aatatcaaaccaccatccc 884  Q
    ||  |||||||||| ||||    
T  12134139 aacctcaaaccaccctccc 12134157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 711 - 852
Target Start/End: Original strand, 13800489 - 13800630
Alignment:
Q  711 ctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatcttttaaaagataaatacaaa 810  Q
    |||| ||||||||||||||||||||   ||||||||||||||||||         |||||||||||||||||||||||| |||||||||||||||| ||     
T  13800489 ctcgactctgtaagtgaaaagaggttcgtaataaaataaaaatgtattttttta-aaaagaacaatgttctatttaaattttttaaaagataaatataag 13800587  T
Q  811 gcgtcgtatatatgttgtgca-cctaaaggtgaaaatcactac 852  Q
    | | ||||||||||   | || || ||||||||||||||||||    
T  13800588 gtgccgtatatatgcgatacacccaaaaggtgaaaatcactac 13800630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 686 - 884
Target Start/End: Original strand, 11912676 - 11912874
Alignment:
Q  686 agggtcattcttacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctattt 785  Q
    |||| ||||||||| |||  ||| |||||||||| ||||||||||||  ||  ||||||||||||||  ||          |||||||||||||||||||    
T  11912676 agggccattcttacaaattcggaggctcggctctataagtgaaaagatatccgtaataaaataaaaacatatattttttttaaagaacaatgttctattt 11912775  T
Q  786 aaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccaccatccc 884  Q
    |||| |   |||| |||||||||||| | ||||||||||   | || | |||| |||||||||||||||||||||| || ||  |||||||||| ||||    
T  11912776 aaatttaaaaaaaaataaatacaaagtgccgtatatatgcaatacatccaaagatgaaaatcactaccgtatacataaggaacctcaaaccaccctccc 11912874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 767 - 823
Target Start/End: Original strand, 11952588 - 11952643
Alignment:
Q  767 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatat 823  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||    
T  11952588 aaagaacaatgttctatttaaattttttaaaagat-aatacaaagtgtcgtatatat 11952643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 766 - 864
Target Start/End: Complemental strand, 26716232 - 26716133
Alignment:
Q  766 aaaagaacaatgttctatttaaatctttt-aaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || |||| |||||||||||| || | | | ||||||||  || |||| |||||||||||| |||||||||||||||||    
T  26716232 aaaagagcaatgttctatttatatttttttaaaagataaatataaggtgccatatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 26716133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 773 - 864
Target Start/End: Original strand, 27506746 - 27506837
Alignment:
Q  773 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    ||||| |||||||| || |||||||||||||||| || | | ||||||||||| || |||| |||||| ||||| ||||| |||||||||||    
T  27506746 caatgatctatttatattttttaaaagataaatataaggtgccgtatatatgtggtacacccaaaggtaaaaatgactactgtatacatgag 27506837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 766 - 853
Target Start/End: Complemental strand, 34694078 - 34693991
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactacc 853  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||| || |||| | |||| ||||| ||||||    
T  34694078 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtcaaaatgactacc 34693991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 766 - 853
Target Start/End: Complemental strand, 34716490 - 34716403
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactacc 853  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||| || |||| | |||| ||||| ||||||    
T  34716490 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtcaaaatgactacc 34716403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 766 - 824
Target Start/End: Complemental strand, 40636241 - 40636183
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatg 824  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | ||||||||||||    
T  40636241 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatg 40636183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 710 - 796
Target Start/End: Original strand, 44914848 - 44914932
Alignment:
Q  710 gctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatcttttaa 796  Q
    |||| ||||||||||||||||||||||  ||||||||||||||||||         |||||||||||||||||||||||| ||||||    
T  44914848 gctcagctctgtaagtgaaaagaggtccgtaataaaataaaaatgta--cttttttaaaagaacaatgttctatttaaattttttaa 44914932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 766 - 807
Target Start/End: Original strand, 22727456 - 22727497
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatac 807  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  22727456 aaaagaacaatgttctatttaaattttttaaaagataaatac 22727497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 693 - 753
Target Start/End: Complemental strand, 12694854 - 12694794
Alignment:
Q  693 ttcttacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaat 753  Q
    |||||||||||| ||| ||||||||||||||||||||||||  |  |||||||||||||||    
T  12694854 ttcttacgaatccggaggctcggctctgtaagtgaaaagagacccgtaataaaataaaaat 12694794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 766 - 864
Target Start/End: Complemental strand, 7162887 - 7162789
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| | |||||||||||| || ||||||||||||||||||| | | ||||||||||  ||  ||  | |||||||||| ||||||||||| |||||    
T  7162887 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatatatgag 7162789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 775 - 864
Target Start/End: Complemental strand, 3953100 - 3953011
Alignment:
Q  775 atgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||||||||| || ||||||||||||||||||| | | |||||| |||  || |||| | |||||||||| | |||||||| ||||||    
T  3953100 atgttctatttatattttttaaaagataaatacaaggtgccgtatacatgcggtacacccagaggtgaaaatgattaccgtatgcatgag 3953011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 766 - 878
Target Start/End: Original strand, 7742132 - 7742245
Alignment:
Q  766 aaaagaacaatgttctatttaaatctttt-aaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    ||||||||||||||||||||| || |||| ||||||||||||||| | ||| ||||||||   | || | |||||||||||  |||| ||||| ||||||    
T  7742132 aaaagaacaatgttctatttatatttttttaaaagataaatacaatgtgtcatatatatgcgttacatccaaaggtgaaaaatactatcgtatgcatgag 7742231  T
Q  865 aaatatcaaaccac 878  Q
     ||  |||||||||    
T  7742232 gaacctcaaaccac 7742245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 693 - 809
Target Start/End: Complemental strand, 10252591 - 10252476
Alignment:
Q  693 ttcttacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatctt 792  Q
    |||||||||||| ||| ||||||| | |||||||||||||||  | ||||||||||||||  ||          |||||| ||||||| |||||||| ||    
T  10252591 ttcttacgaatcaggaggctcggcacggtaagtgaaaagaggcgtgtaataaaataaaaacatattttttttt-aaagaaaaatgttcaatttaaatttt 10252493  T
Q  793 ttaaaagataaatacaa 809  Q
    |||||||||||||||||    
T  10252492 ttaaaagataaatacaa 10252476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 795 - 884
Target Start/End: Original strand, 22727530 - 22727619
Alignment:
Q  795 aaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccaccatccc 884  Q
    ||||||||||||| | | | ||||||||||  || |||| ||| ||||||||||||||| ||||||||| ||   |||||||||||||||    
T  22727530 aaaagataaatactatgtgacgtatatatgcggtacacccaaaagtgaaaatcactaccatatacatgataaccctcaaaccaccatccc 22727619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 800 - 864
Target Start/End: Complemental strand, 37182739 - 37182675
Alignment:
Q  800 ataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||||||| | ||||||||||||   | |||| ||| ||||||||||||||||||||||||||    
T  37182739 ataaatacaaggtgtcgtatatatgcaatacacccaaaagtgaaaatcactaccgtatacatgag 37182675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1590 (Bit Score: 75; Significance: 5e-34; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 710 - 884
Target Start/End: Original strand, 202 - 375
Alignment:
Q  710 gctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatcttttaaaagataaatacaa 809  Q
    ||||||||||| ||||||| ||||| | |||||||||||||||||||         |||||||||||||||||||||||| |||||||||||||||||||    
T  202 gctcggctctgcaagtgaatagaggcccataataaaataaaaatgtatttttatt-aaaagaacaatgttctatttaaattttttaaaagataaatacaa 300  T
Q  810 agcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccaccatccc 884  Q
     | ||||||||||||  || |||| ||| |||||||||||||||||||||||||  ||  |||||||||| ||||    
T  301 ggtgtcgtatatatgcggtacacccaaatgtgaaaatcactaccgtatacatgatgaacctcaaaccaccctccc 375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 69; Significance: 2e-30; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 713 - 864
Target Start/End: Original strand, 206436 - 206586
Alignment:
Q  713 cggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagc 812  Q
    ||||||||||||||||||||||| | ||||||||||||||||||         ||| ||| |||||||||||||||| || |||||||||||||||| |     
T  206436 cggctctgtaagtgaaaagaggtttgtaataaaataaaaatgtatttttttttaaa-gaagaatgttctatttaaattttgtaaaagataaatacaaggt 206534  T
Q  813 gtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    ||||||||||||  || |||| || |||||||||||||||||||||||||||    
T  206535 gtcgtatatatgcggtacacccaatggtgaaaatcactaccgtatacatgag 206586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 3e-29; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 766 - 884
Target Start/End: Original strand, 27237421 - 27237539
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgaga 865  Q
    |||||||||||||||||||||||| ||||||||||||||||||| | || ||||||||||  || | ||||||||||||||||||| ||||||||||||     
T  27237421 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgttgtatatatgtgatgaatctaaaggtgaaaatcactatcgtatacatgagg 27237520  T
Q  866 aatatcaaaccaccatccc 884  Q
    ||  |||||||||| ||||    
T  27237521 aacctcaaaccaccctccc 27237539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 768 - 864
Target Start/End: Original strand, 36902924 - 36903020
Alignment:
Q  768 aagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||||||||||||||||||| |||||| ||||||||||||   |||||||||||||||| ||||||||||||||||||| ||| |||||||||||    
T  36902924 aagaacaatgttctatttaaattttttaatagataaatacaagatgtcgtatatatgttgtacacctaaaggtgaaaatcagtactgtatacatgag 36903020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 686 - 864
Target Start/End: Original strand, 2611180 - 2611358
Alignment:
Q  686 agggtcattcttacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctattt 785  Q
    |||||| ||| || ||||| ||| |||||| |||| |||||||||||||  | |||||||||||||| |||         ||||||||||||||||||||    
T  2611180 agggtcgttcctatgaatccggaggctcggttctgcaagtgaaaagaggcttgtaataaaataaaaaagtatttttttttaaaagaacaatgttctattt 2611279  T
Q  786 aaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||| ||||||||||||||||||| | ||||||||||||  || |||  || |||||||||||| || |||||||||||    
T  2611280 aaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacacaatggtgaaaatcacaactgtatacatgag 2611358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 766 - 884
Target Start/End: Complemental strand, 7398555 - 7398437
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgaga 865  Q
    |||||||||||||||||||||||| |||| |||||||||||||| | | | |||||||||  | |||||||||||||||||||||||| ||||||||||     
T  7398555 aaaagaacaatgttctatttaaattttttgaaagataaatacaaggtgccatatatatgtgatacacctaaaggtgaaaatcactaccatatacatgagg 7398456  T
Q  866 aatatcaaaccaccatccc 884  Q
    ||  |||||||||| ||||    
T  7398455 aacctcaaaccaccctccc 7398437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 767 - 864
Target Start/End: Original strand, 9021799 - 9021896
Alignment:
Q  767 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||||||| | |||||||||| ||||||||||||||||||| | | ||||||||||  || |||| ||||||||||||||||||||||||||||||    
T  9021799 aaagaacaatttgctatttaaattttttaaaagataaatacaatgtgccgtatatatgcggtacacccaaaggtgaaaatcactaccgtatacatgag 9021896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 767 - 879
Target Start/End: Original strand, 6765680 - 6765792
Alignment:
Q  767 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaa 866  Q
    ||||||||||||||||||||||| ||||||||||||||||||| | |||||||||| |  || || | |||||||||||||||||||||||| | ||| |    
T  6765680 aaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatataagccgtacatccaaaggtgaaaatcactaccgtatataagagta 6765779  T
Q  867 atatcaaaccacc 879  Q
    |  ||||||||||    
T  6765780 acctcaaaccacc 6765792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 697 - 856
Target Start/End: Complemental strand, 38971424 - 38971267
Alignment:
Q  697 tacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatcttttaa 796  Q
    ||||||||| ||  ||||||| |||||||||||||||  |  ||||||||||||||||||         |||||| |||| || ||||||||| ||||||    
T  38971424 tacgaatctagagactcggctttgtaagtgaaaagagacccgtaataaaataaaaatgtatttttttt-aaaagatcaatattttatttaaat-ttttaa 38971327  T
Q  797 aagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgta 856  Q
    ||||||||||||| | |||||||||||||| | |||||||| ||||||||||||||||||    
T  38971326 aagataaatacaaggtgtcgtatatatgttatacacctaaatgtgaaaatcactaccgta 38971267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 766 - 864
Target Start/End: Complemental strand, 29077324 - 29077226
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | ||||||||||||  || |||| | |||||||||| |||||||||||||||||    
T  29077324 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacaccaagaggtgaaaatgactaccgtatacatgag 29077226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 697 - 858
Target Start/End: Complemental strand, 23744968 - 23744808
Alignment:
Q  697 tacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatcttttaa 796  Q
    ||||||| |||| |||| ||||| |||||||||||||| |  ||| ||||||||||||||         ||||||||||||||||| |||||| ||||||    
T  23744968 tacgaatttggaggctcagctctataagtgaaaagaggcccgtaaaaaaataaaaatgtattttttta-aaaagaacaatgttctaattaaattttttaa 23744870  T
Q  797 aagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtata 858  Q
    ||||||||||||| | | || |||||||  || ||||||||| | |||||||||||||||||    
T  23744869 aagataaatacaaggtgccgcatatatgcggtacacctaaagataaaaatcactaccgtata 23744808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 697 - 864
Target Start/End: Complemental strand, 23859245 - 23859079
Alignment:
Q  697 tacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatcttttaa 796  Q
    ||||||| |||| ||||| ||||||||||||||||||  || |||||||||||||| |||         || |||| |||||||||||||||| ||||||    
T  23859245 tacgaatttggaggctcgactctgtaagtgaaaagagacctgtaataaaataaaaacgtattttgttt-aagagaataatgttctatttaaattttttaa 23859147  T
Q  797 aagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    ||||||||||||| |   ||||||||||   | |||| |||| ||||||| |||||||||||||||||    
T  23859146 aagataaatacaatgtaccgtatatatgcgatacacccaaagatgaaaattactaccgtatacatgag 23859079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 710 - 867
Target Start/End: Original strand, 18776708 - 18776865
Alignment:
Q  710 gctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatcttttaaaagataaatacaa 809  Q
    ||||||||||| || ||||||||||||  | ||||||| ||||| ||         |||||| |||||||||||||| || |||||||||||||||||||    
T  18776708 gctcggctctggaaatgaaaagaggtcagtgataaaatcaaaatataattttttttaaaagagcaatgttctatttatattttttaaaagataaatacaa 18776807  T
Q  810 agcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaa 867  Q
     | | ||||||||||  || |||| | | |||||||| ||||||||||||||||||||    
T  18776808 ggtgccgtatatatgcggtacacccagatgtgaaaatgactaccgtatacatgagaaa 18776865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 766 - 864
Target Start/End: Original strand, 48983842 - 48983940
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||| ||||||| |||||||| || |||||||||||||||| || | ||||||||||||  || |||| |||||||||||| |||||||||||||||||    
T  48983842 aaaaaaacaatgatctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaataactaccgtatacatgag 48983940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 813 - 884
Target Start/End: Original strand, 17800266 - 17800337
Alignment:
Q  813 gtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccaccatccc 884  Q
    |||||||||||||||| |||| ||| ||||||||||||||||||| |||||| ||| |||||||||||||||    
T  17800266 gtcgtatatatgttgtacacccaaaagtgaaaatcactaccgtatgcatgaggaatttcaaaccaccatccc 17800337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 766 - 864
Target Start/End: Original strand, 8171537 - 8171635
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||| | || ||||||| |||||||||||||||||    
T  8171537 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgag 8171635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 766 - 864
Target Start/End: Original strand, 20091279 - 20091377
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||| ||||||| |||||||| || |||||||||||||||| || | | ||||||||||  || |||| |||||||||||| |||||||||||||||||    
T  20091279 aaaaaaacaatgatctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 20091377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 767 - 853
Target Start/End: Original strand, 21763586 - 21763672
Alignment:
Q  767 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactacc 853  Q
    |||||||| |||||||||||||| |||||||||||||||||||||  |||||||||||   | |||| ||| |||||||||||||||    
T  21763586 aaagaacattgttctatttaaattttttaaaagataaatacaaagtatcgtatatatgcgatacaccaaaaagtgaaaatcactacc 21763672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 774 - 879
Target Start/End: Complemental strand, 20153297 - 20153192
Alignment:
Q  774 aatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaatatcaa 873  Q
    |||||| ||||||||| ||||||||||||||||||||| || |||||||||   |  ||| |||| ||||||||||| |||||||||||||  || ||||    
T  20153297 aatgttttatttaaattttttaaaagataaatacaaagtgttgtatatatgcgataaacccaaagatgaaaatcactgccgtatacatgagggatctcaa 20153198  T
Q  874 accacc 879  Q
    ||||||    
T  20153197 accacc 20153192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 697 - 864
Target Start/End: Original strand, 23020415 - 23020579
Alignment:
Q  697 tacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatcttttaa 796  Q
    |||||||||||| || ||| ||||||||||||||||||||  ||||||||||||||||||         |||||||||| |||  ||||| || ||||||    
T  23020415 tacgaatctggaggc-cggttctgtaagtgaaaagaggtccgtaataaaataaaaatgta-ttttttttaaaagaacaacgtttcatttagattttttaa 23020512  T
Q  797 aagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||||||| || | || |||||||||     |||  ||||||||||||||||||||||||||||||    
T  23020513 aagataaatataaggtgttgtatatatg-cacacactcaaaggtgaaaatcactaccgtatacatgag 23020579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 766 - 877
Target Start/End: Complemental strand, 36891682 - 36891571
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgaga 865  Q
    ||||||| ||||||||||||| || ||||||| ||| ||||||| | || ||||||||   || || | ||||||||||||||||||||||||||||||     
T  36891682 aaaagaataatgttctatttatattttttaaatgatgaatacaatgtgttgtatatattcggtacatccaaaggtgaaaatcactaccgtatacatgagg 36891583  T
Q  866 aatatcaaacca 877  Q
    ||  ||||||||    
T  36891582 aacctcaaacca 36891571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 773 - 867
Target Start/End: Original strand, 10329415 - 10329509
Alignment:
Q  773 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaa 867  Q
    |||||||||||||| || |||||||||||||||| || | | ||||||||||  |   ||| |||||||||||| ||||||||||||||||||||    
T  10329415 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgaggaaaacccaaaggtgaaaatgactaccgtatacatgagaaa 10329509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 766 - 864
Target Start/End: Complemental strand, 19692198 - 19692100
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || |||||||||||||||| || | | | ||||||||  || ||||||||||||||||| |||  ||||||||||||    
T  19692198 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccatatatatgcggtacacctaaaggtgaaaatgactttcgtatacatgag 19692100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 766 - 864
Target Start/End: Original strand, 38414874 - 38414972
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| ||| |||||||||  || |||||||||||||||| || | | ||||||||||| || |||| |||||||||||| ||||| |||||||||||    
T  38414874 aaaagagcaacgttctatttgtattttttaaaagataaatataaggtgacgtatatatgtggtacacccaaaggtgaaaatgactactgtatacatgag 38414972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 700 - 809
Target Start/End: Original strand, 12419428 - 12419536
Alignment:
Q  700 gaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatcttttaaaag 799  Q
    ||||| ||| |||||||| |||||||||||||||| |  ||||||||||| || |||         |||||||||||||||||||||||| |||||||||    
T  12419428 gaatccggaggctcggctttgtaagtgaaaagaggcccgtaataaaataacaacgtatttttttt-aaaagaacaatgttctatttaaattttttaaaag 12419526  T
Q  800 ataaatacaa 809  Q
    ||||||||||    
T  12419527 ataaatacaa 12419536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 775 - 864
Target Start/End: Original strand, 12596294 - 12596383
Alignment:
Q  775 atgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||||||||| || |||| |||||||||||||| | | ||||||||||| || |||| | |||||||||| |||||||||| ||||||    
T  12596294 atgttctatttatatttttttaaagataaatacaaggtgccgtatatatgtggtacacccagaggtgaaaatgactaccgtatgcatgag 12596383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 771 - 864
Target Start/End: Original strand, 24525688 - 24525781
Alignment:
Q  771 aacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||||||||||||| || |||||||||||||||| || | | ||| ||||||  || |||| ||| |||||||| |||||||||||||||||    
T  24525688 aacaatgttctatttatattttttaaaagataaatataaggtgccgtgtatatgcggtacacccaaaagtgaaaatgactaccgtatacatgag 24525781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 767 - 846
Target Start/End: Original strand, 33162338 - 33162417
Alignment:
Q  767 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaat 846  Q
    ||||| ||||| |||||||| || ||||||||||||||||||| | | ||||||||||  || |||||||||||||||||    
T  33162338 aaagagcaatgctctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctaaaggtgaaaat 33162417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 766 - 864
Target Start/End: Complemental strand, 10955588 - 10955490
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| | |||||||||||| || |||||||||||||||| || | | ||||||||||  || |||  | |||||||||| |||||||||||||||||    
T  10955588 aaaagagcgatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatgag 10955490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 781 - 864
Target Start/End: Original strand, 9014782 - 9014858
Alignment:
Q  781 tatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    ||||||||| || |||||||||||||||| | |||||||||||       ||| ||||||||||||||||||||||||||||||    
T  9014782 tatttaaattttgtaaaagataaatacaatgtgtcgtatatat-------acccaaaggtgaaaatcactaccgtatacatgag 9014858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 766 - 879
Target Start/End: Complemental strand, 12981430 - 12981317
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgaga 865  Q
    ||||||| |||||||||||||| | ||||||||||||||||||| |   | |||||| |  || |||  |||||||||||||||||| ||||| |||||     
T  12981430 aaaagaagaatgttctatttaatttttttaaaagataaatacaaggttccatatatacgcggtacacacaaaggtgaaaatcactactgtatatatgagg 12981331  T
Q  866 aatatcaaaccacc 879  Q
    ||  ||||||||||    
T  12981330 aacctcaaaccacc 12981317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 770 - 879
Target Start/End: Complemental strand, 18201237 - 18201128
Alignment:
Q  770 gaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaata 869  Q
    |||||||| ||||||||||| |||||||| ||||||||||   | | ||||||||| || ||||||| ||||||||||  |||| || ||||||| ||      
T  18201237 gaacaatgatctatttaaattttttaaaatataaatacaagatgccatatatatgtggtacacctaagggtgaaaatcgttaccttacacatgaggaacc 18201138  T
Q  870 tcaaaccacc 879  Q
    ||||||||||    
T  18201137 tcaaaccacc 18201128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 791 - 864
Target Start/End: Original strand, 23551094 - 23551167
Alignment:
Q  791 ttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||||||||||||| || | ||||||||||||  || || | |||||||||||| |||||||||||||||||    
T  23551094 ttttaaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgag 23551167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 686 - 751
Target Start/End: Original strand, 26917650 - 26917715
Alignment:
Q  686 agggtcattcttacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaa 751  Q
    |||||| ||||||||||||| || ||| | |||||||||||||||||||||  |||||||||||||    
T  26917650 agggtcgttcttacgaatctagaggcttgactctgtaagtgaaaagaggtccgtaataaaataaaa 26917715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 767 - 823
Target Start/End: Original strand, 9014177 - 9014233
Alignment:
Q  767 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatat 823  Q
    ||||||||||||| ||||||||| ||||||||||||||||||| | || ||||||||    
T  9014177 aaagaacaatgttttatttaaattttttaaaagataaatacaatgtgttgtatatat 9014233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 766 - 846
Target Start/End: Complemental strand, 26254097 - 26254017
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaat 846  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||| |||| |||||||    
T  26254097 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaagatgaaaat 26254017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 774 - 864
Target Start/End: Complemental strand, 8239783 - 8239693
Alignment:
Q  774 aatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    ||||||||||||| || |||||||| ||||||| || | | ||||||||||| || |||| ||| |||||||| | ||||||||| |||||    
T  8239783 aatgttctatttatattttttaaaaaataaatataatgtgccgtatatatgtggtacacccaaatgtgaaaatgattaccgtatatatgag 8239693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 773 - 864
Target Start/End: Original strand, 47984974 - 47985066
Alignment:
Q  773 caatgttctatttaaatctttt-aaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||||||||||| || |||| |||||| ||||| || | | ||||||||||  || |||| |||||||||||| || ||||||||||||||    
T  47984974 caatgttctatttatatttttttaaaagaaaaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgaccaccgtatacatgag 47985066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 766 - 864
Target Start/End: Complemental strand, 28749813 - 28749716
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||| ||||||||| || ||| ||||||||||||||| | | ||||||||||  || |||  | | |||||||| |||||||||||||||||    
T  28749813 aaaagagcaatattctatttatatttttgaaaagataaatacaaggtgccgtatatatgcggtacactcagatgtgaaaat-actaccgtatacatgag 28749716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 65; Significance: 4e-28; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 700 - 884
Target Start/End: Complemental strand, 40257 - 40071
Alignment:
Q  700 gaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatctttt--aaa 797  Q
    ||||||||| | || |||||||||||||||||||||   ||||||||||||||||||         |||||||||||||||||||||| | ||||  |||    
T  40257 gaatctggaggttctgctctgtaagtgaaaagaggttcgtaataaaataaaaatgtattttttttaaaaagaacaatgttctatttaatttttttttaaa 40158  T
Q  798 agataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccaccatccc 884  Q
    |||||||||||| | | ||||| |||||||| ||||  |||||||||||||| | |||||||||||| ||  |||||||||| ||||    
T  40157 agataaatacaaggtgccgtatttatgttgtacaccctaaggtgaaaatcacaatcgtatacatgagcaacctcaaaccaccgtccc 40071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 700 - 884
Target Start/End: Complemental strand, 138317 - 138131
Alignment:
Q  700 gaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatctttt--aaa 797  Q
    ||||||||| | || |||||||||||||||||||||   ||||||||||||||||||         |||||||||||||||||||||| | ||||  |||    
T  138317 gaatctggaggttctgctctgtaagtgaaaagaggttcgtaataaaataaaaatgtattttttttaaaaagaacaatgttctatttaatttttttttaaa 138218  T
Q  798 agataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccaccatccc 884  Q
    |||||||||||| | | ||||| |||||||| ||||  |||||||||||||| | |||||||||||| ||  |||||||||| ||||    
T  138217 agataaatacaaggtgccgtatttatgttgtacaccctaaggtgaaaatcacaatcgtatacatgagcaacctcaaaccaccgtccc 138131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 2e-27; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 767 - 866
Target Start/End: Complemental strand, 49393195 - 49393097
Alignment:
Q  767 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaa 866  Q
    ||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||| ||| |||| |||||| ||||| |||||||||||||||||||    
T  49393195 aaagaacaatgttctctttaaattttttaaaagataaatacaaggcgtcgtatatatg-tgtacacccaaaggtaaaaattactaccgtatacatgagaa 49393097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 767 - 860
Target Start/End: Complemental strand, 25855527 - 25855435
Alignment:
Q  767 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtataca 860  Q
    ||||||||||||||||||||||| ||||||||||||| ||||| | ||||||||||||| ||||||| |||| |||||||||||||||||||||    
T  25855527 aaagaacaatgttctatttaaattttttaaaagataa-tacaaggtgtcgtatatatgtagtgcacccaaagttgaaaatcactaccgtataca 25855435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 766 - 881
Target Start/End: Complemental strand, 8420433 - 8420318
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgaga 865  Q
    ||||||| |||||||||||||||| ||||||||||||||||||| | | |||||||||||||| |||| ||| |||||||||||| ||||||| | |||     
T  8420433 aaaagaataatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgttgtacacccaaatgtgaaaatcactgccgtatatacgagg 8420334  T
Q  866 aatatcaaaccaccat 881  Q
    ||  ||||||||||||    
T  8420333 aacctcaaaccaccat 8420318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 717 - 851
Target Start/End: Original strand, 32319108 - 32319239
Alignment:
Q  717 tctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcg 816  Q
    |||||||||||||| |||||| ||||||||||||||||||          |||||| |||||||||||||||| ||||||||||||||||||||| || |    
T  32319108 tctgtaagtgaaaataggtctgtaataaaataaaaatgtaagttttt---aaagaataatgttctatttaaattttttaaaagataaatacaaagtgttg 32319204  T
Q  817 tatatatgttgtgcacctaaaggtgaaaatcacta 851  Q
    ||||||||  || |||| |||||||||||| ||||    
T  32319205 tatatatgcggtacacccaaaggtgaaaattacta 32319239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 767 - 880
Target Start/End: Complemental strand, 790042 - 789929
Alignment:
Q  767 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaa 866  Q
    |||||||||| |||||||||||| |||||||  |||||||||| | ||| |||||||||||| |||| |||||| |||||||| ||| |||||||||| |    
T  790042 aaagaacaatcttctatttaaattttttaaacaataaatacaaggtgtcatatatatgttgtacacccaaaggtaaaaatcaccaccatatacatgagga 789943  T
Q  867 atatcaaaccacca 880  Q
    |  |||||||||||    
T  789942 acctcaaaccacca 789929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 774 - 864
Target Start/End: Original strand, 8073345 - 8073435
Alignment:
Q  774 aatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    ||||||||||||| || ||||||||||||||||||| | ||||||||||||  || |||| ||| |||||||| |||||||||||||||||    
T  8073345 aatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgag 8073435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 766 - 864
Target Start/End: Complemental strand, 21582878 - 21582780
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||||||||||| |||||| || ||||||||||||||||||| | | ||||||||||  || |||| | |||||||||| |||||||||||||||||    
T  21582878 aaaagaacaatgttttatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgag 21582780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 773 - 867
Target Start/End: Original strand, 27078575 - 27078669
Alignment:
Q  773 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaa 867  Q
    |||||||||||||| || ||||||||||||||||||||| | ||||||||||  ||  ||| | |||||||||| ||||||||||||||||||||    
T  27078575 caatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgagaaa 27078669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 773 - 867
Target Start/End: Original strand, 27084372 - 27084466
Alignment:
Q  773 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaa 867  Q
    |||||||||||||| || ||||||||||||||||||||| | ||||||||||  ||  ||| | |||||||||| ||||||||||||||||||||    
T  27084372 caatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgagaaa 27084466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 766 - 864
Target Start/End: Complemental strand, 37168474 - 37168376
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||| |||||||||||||||| || |||||||||||||||| || | | ||||||||||| ||  ||| |||||||||||| |||||||||||||||||    
T  37168474 aaaaaaacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgtggtatacccaaaggtgaaaatgactaccgtatacatgag 37168376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 766 - 864
Target Start/End: Original strand, 54619202 - 54619300
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||| | |||||||||| |||||||||||||||||    
T  54619202 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgag 54619300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 719 - 852
Target Start/End: Complemental strand, 26279694 - 26279563
Alignment:
Q  719 tgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgta 818  Q
    |||||||||||||||||| ||| ||||||||||| |||         |||||||||||||||||||||||| |||||||||||||||| || | ||||||    
T  26279694 tgtaagtgaaaagaggtccatagtaaaataaaaacgtattttttt--aaaagaacaatgttctatttaaattttttaaaagataaatagaaggtgtcgta 26279597  T
Q  819 tatatgttgtgcacctaaaggtgaaaatcactac 852  Q
    ||||||   | |||| |||| |||||||||||||    
T  26279596 tatatgcaatacacccaaagatgaaaatcactac 26279563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 766 - 867
Target Start/End: Original strand, 53506883 - 53506984
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgaga 865  Q
    |||| |||||||||||||||| || |||||||||||||||| || |   ||||||||||  || |||| |||||||||||| ||||||||||||||||||    
T  53506883 aaaaaaacaatgttctatttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaga 53506982  T
Q  866 aa 867  Q
    ||    
T  53506983 aa 53506984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 766 - 864
Target Start/End: Original strand, 3953895 - 3953993
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    ||||||||||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||| | |||||||||| |  ||||||||||||||    
T  3953895 aaaagaacaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgaaaaccgtatacatgag 3953993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 766 - 864
Target Start/End: Original strand, 34290635 - 34290733
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||| |||||||||||||||| || |||||||||||||||| || | | ||||||||||  || |||| |||||||||||| ||||||||||| |||||    
T  34290635 aaaaaaacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgag 34290733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 701 - 863
Target Start/End: Complemental strand, 52374828 - 52374666
Alignment:
Q  701 aatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatcttttaaaaga 800  Q
    |||||||| ||||  || ||||||||||||||  ||  |||||||||||||| |||         |||||||||||||||||||||||| ||||   | |    
T  52374828 aatctggatgctcaactttgtaagtgaaaagaaatccgtaataaaataaaaacgtatttttttttaaaagaacaatgttctatttaaatttttttttaaa 52374729  T
Q  801 taaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatga 863  Q
    ||||||||| | |||||||| |||   | || ||||||| |||||||||||||||||||||||    
T  52374728 taaatacaatgtgtcgtatagatgcgatacatctaaaggagaaaatcactaccgtatacatga 52374666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 766 - 861
Target Start/End: Original strand, 54407157 - 54407252
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacat 861  Q
    |||| |||||||||||||||| || |||||||||||||||| || | | ||||||||||  || || | |||||||||||| ||||||||||||||    
T  54407157 aaaaaaacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacat 54407252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 774 - 884
Target Start/End: Original strand, 28689368 - 28689478
Alignment:
Q  774 aatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaatatcaa 873  Q
    |||||||||||||||| ||  ||||||||||||||| | | ||||||||||   |  | | |||||||||||||||| ||||||||||||||||| ||||    
T  28689368 aatgttctatttaaattttcaaaaagataaatacaaggtgccgtatatatgcgatatatccaaaggtgaaaatcactgccgtatacatgagaaatctcaa 28689467  T
Q  874 accaccatccc 884  Q
    || ||| ||||    
T  28689468 actaccctccc 28689478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 766 - 864
Target Start/End: Original strand, 38681092 - 38681190
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||| ||||  || || | | |||||||||| |||||||||||||||||    
T  38681092 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatgtatgcggtacatccagaggtgaaaatgactaccgtatacatgag 38681190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 766 - 864
Target Start/End: Original strand, 43207237 - 43207334
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || |||||||||||||||| || | | ||||||||||  || || | |||||||||||| |||||||||||||||||    
T  43207237 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatc-aaaggtgaaaatgactaccgtatacatgag 43207334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 774 - 864
Target Start/End: Complemental strand, 44708576 - 44708486
Alignment:
Q  774 aatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    ||||||||||||| || |||||||||||||||| || | | |||||||||   || |||| |||||||||||| |||||||||||||||||    
T  44708576 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatccggtacacccaaaggtgaaaatgactaccgtatacatgag 44708486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 766 - 864
Target Start/End: Original strand, 54574826 - 54574924
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||||||||||||||||||||| ||| |||| |||||||||| |   ||||||||||  || |||| ||| || |||||||||||| ||||||||||    
T  54574826 aaaagaacaatgttctatttaaatttttcaaaatataaatacaaggtaccgtatatatgcggtacacccaaaagtaaaaatcactaccatatacatgag 54574924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 775 - 864
Target Start/End: Complemental strand, 47467782 - 47467693
Alignment:
Q  775 atgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||||||||| || ||||||||||||||||||| | | ||||||||||   | |||| | |||||||||| |||||||||||||||||    
T  47467782 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactaccgtatacatgag 47467693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 697 - 824
Target Start/End: Original strand, 23641248 - 23641375
Alignment:
Q  697 tacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatcttttaa 796  Q
    |||||||||||| |||||| |||||| ||||||||||  |  | |||||||||||| |||         ||||||||||  ||||||||| || ||||||    
T  23641248 tacgaatctggaggctcggttctgtaggtgaaaagagacccgtgataaaataaaaacgtatttttttttaaaagaacaacattctatttatattttttaa 23641347  T
Q  797 aagataaatacaaagcgtcgtatatatg 824  Q
    ||||||||||||| | ||||||||||||    
T  23641348 aagataaatacaatgtgtcgtatatatg 23641375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 766 - 842
Target Start/End: Complemental strand, 42453511 - 42453435
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtga 842  Q
    ||||||||||||||| |||||||| ||||||||||||||||||| | ||| ||||||||   | |||||||||||||    
T  42453511 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 42453435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 773 - 864
Target Start/End: Original strand, 50939239 - 50939330
Alignment:
Q  773 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    ||||| |||||||| || |||||||||||||||| || | | ||||||||| | || |||| |||||| ||||| |||||||||||||||||    
T  50939239 caatgatctatttatattttttaaaagataaatataaggtgccgtatatatatggtacacccaaaggtaaaaatgactaccgtatacatgag 50939330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 766 - 824
Target Start/End: Complemental strand, 18372590 - 18372532
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatg 824  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | ||||||||||||    
T  18372590 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatg 18372532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 766 - 864
Target Start/End: Original strand, 36716024 - 36716122
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||| | |||||||||  || ||||||||| ||||    
T  36716024 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaacgaccaccgtatacgtgag 36716122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 766 - 864
Target Start/End: Complemental strand, 42098908 - 42098810
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| | |||||||||||| || ||||||||||||||||||| | | ||||||||||  ||  ||  | |||||||||| |||||||||||||||||    
T  42098908 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatacatgag 42098810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 766 - 861
Target Start/End: Original strand, 9878686 - 9878781
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacat 861  Q
    |||||| |||| ||||||||| || |||||||||||||||| || | |  |||||||||  || |||| |||||||||||| |||| |||||||||    
T  9878686 aaaagagcaatattctatttatattttttaaaagataaatataaggtgcagtatatatgcggtacacccaaaggtgaaaatgactatcgtatacat 9878781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 766 - 864
Target Start/End: Original strand, 53149313 - 53149411
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| | |||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||  | || | ||||| |||||||||||||||||    
T  53149313 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagagataaaaatgactaccgtatacatgag 53149411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 773 - 864
Target Start/End: Complemental strand, 36606065 - 36605974
Alignment:
Q  773 caatgttctatttaaatcttttaaaa-gataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||||||||||| || |||||||| ||||||||||| | | ||||||||||  || |||| | || ||||||| |||||||||||||||||    
T  36606065 caatgttctatttatattttttaaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaat-actaccgtatacatgag 36605974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 766 - 824
Target Start/End: Original strand, 50258622 - 50258680
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatg 824  Q
    |||||| | |||||||||||| || |||||||| |||||||||| | ||||||||||||    
T  50258622 aaaagagcgatgttctatttatattttttaaaaaataaatacaaggtgtcgtatatatg 50258680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 59; Significance: 2e-24; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 766 - 864
Target Start/End: Complemental strand, 106642 - 106544
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    ||||||||||||||||||||| || |||||||||||||||| || | ||||||||||||  || |||| |||||||||||| |||||||||||||||||    
T  106642 aaaagaacaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 106544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 58; Significance: 6e-24; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 767 - 884
Target Start/End: Original strand, 23993 - 24110
Alignment:
Q  767 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaa 866  Q
    |||||||||| |||||||||||| ||||||||||||||||||| | ||||||||||||  || |||| ||| |||||||||| |||||||| ||| || |    
T  23993 aaagaacaatattctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaagtgaaaatcattaccgtatgcataagga 24092  T
Q  867 atatcaaaccaccatccc 884  Q
    || |||||||||| ||||    
T  24093 atctcaaaccaccctccc 24110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 6e-24; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 778 - 879
Target Start/End: Original strand, 21183686 - 21183787
Alignment:
Q  778 ttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaatatcaaacca 877  Q
    |||||||||||| |||||||||||||||||||||   ||||||||||| || |||| |||| ||||||||||||||||||||||||| ||  ||||||||    
T  21183686 ttctatttaaattttttaaaagataaatacaaagtagcgtatatatgtggtacacccaaagttgaaaatcactaccgtatacatgaggaacctcaaacca 21183785  T
Q  878 cc 879  Q
    ||    
T  21183786 cc 21183787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 701 - 884
Target Start/End: Original strand, 2477520 - 2477701
Alignment:
Q  701 aatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatcttttaaaaga 800  Q
    |||||||| |||||| |||||||||||||||||  |  ||||||||||| | ||||         ||| ||||||||||| |||||||| ||||||||||    
T  2477520 aatctggaggctcggttctgtaagtgaaaagagacccgtaataaaataagattgtattttttt--aaacgaacaatgttcaatttaaattttttaaaaga 2477617  T
Q  801 taaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccaccatccc 884  Q
    ||||||||| | | | ||||||||   | |||| ||| |||||||||||||||||||||||||| ||  |||||||||| ||||    
T  2477618 taaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaaccaccctccc 2477701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 766 - 864
Target Start/End: Original strand, 13727398 - 13727496
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||| | |||||||||| |||||||||||||||||    
T  13727398 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgag 13727496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 766 - 864
Target Start/End: Original strand, 19737691 - 19737789
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || |||| |||||||||||||| | | ||||||||||  || |||||| |||||||||| |||||||||||||||||    
T  19737691 aaaagagcaatgttctatttatatttttttaaagataaatacaaggtgccgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgag 19737789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 766 - 864
Target Start/End: Original strand, 20711719 - 20711817
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || |||||||||||||||| || | | ||||||||||  || |||| |||||||||||| |||||||||||||||||    
T  20711719 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 20711817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 766 - 864
Target Start/End: Complemental strand, 21479601 - 21479503
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||| | |||||||||| |||||||||||||||||    
T  21479601 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgag 21479503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 766 - 864
Target Start/End: Complemental strand, 21280652 - 21280554
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||| | |||| ||||| |||||||||||||||||    
T  21280652 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgag 21280554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 766 - 864
Target Start/End: Original strand, 27788687 - 27788785
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||| ||||||||| || |||||||||||||||| || | | ||||||||||  || |||| |||||||||||| |||||||||||||||||    
T  27788687 aaaagagcaattttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 27788785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 774 - 864
Target Start/End: Complemental strand, 33774216 - 33774126
Alignment:
Q  774 aatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    ||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||| ||| |||||||| |||||||||||||||||    
T  33774216 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaatgtgaaaatgactaccgtatacatgag 33774126  T

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Target: chr6; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 766 - 864
Target Start/End: Complemental strand, 34397964 - 34397866
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || ||||||||||| ||||| |||| |||| |||||||    
T  34397964 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgacgtatatatgcggtacacctaaaggtaaaaatgactatcgtaaacatgag 34397866  T

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Target: chr6; HSP #11
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 767 - 864
Target Start/End: Original strand, 1155849 - 1155946
Alignment:
Q  767 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    ||||| |||||||||||||| || ||||||||||||||||||| | ||| ||||||||  || || | | |||||||||| |||||||||||||||||    
T  1155849 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcatatatatgcggtacatccagaggtgaaaatgactaccgtatacatgag 1155946  T

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Target: chr6; HSP #12
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 770 - 879
Target Start/End: Complemental strand, 6159541 - 6159432
Alignment:
Q  770 gaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaata 869  Q
    ||||||||||||||||| || ||||||||||||||||||| | ||||||||||||  || ||   ||||||| |||||||||||||||| || || ||      
T  6159541 gaacaatgttctatttatattttttaaaagataaatacaatgtgtcgtatatatgcggtacattcaaaggtggaaatcactaccgtatatataaggaacc 6159442  T
Q  870 tcaaaccacc 879  Q
    ||||||||||    
T  6159441 tcaaaccacc 6159432  T

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Target: chr6; HSP #13
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 775 - 864
Target Start/End: Original strand, 24711007 - 24711096
Alignment:
Q  775 atgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||||||||| || ||||||||||||||||||| | | ||||||||||| || |||  | |||||||||| |||||||||||||||||    
T  24711007 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacactcagaggtgaaaatgactaccgtatacatgag 24711096  T

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Target: chr6; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 773 - 864
Target Start/End: Complemental strand, 28075883 - 28075792
Alignment:
Q  773 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||||||||||| || |||||||||||||||| || | | ||||||||||   | |||| |||||||||||| |||||||||||||||||    
T  28075883 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgag 28075792  T

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Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 773 - 863
Target Start/End: Complemental strand, 17354054 - 17353964
Alignment:
Q  773 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatga 863  Q
    |||||||||||||| || |||||||||||||||| || | ||||||||||||  || |||| ||| |||||||| |||| |||||||||||    
T  17354054 caatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaatgtgaaaatgactatcgtatacatga 17353964  T

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Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 686 - 864
Target Start/End: Complemental strand, 20611974 - 20611799
Alignment:
Q  686 agggtcattcttacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctattt 785  Q
    |||||| ||| |||||||  ||| ||||||||||||||||||||||||| | |||| |||||||||| ||            ||||  ||||||||| ||    
T  20611974 agggtcgttcctacgaattcggaggctcggctctgtaagtgaaaagaggcccataaaaaaataaaaacgtttttttttc---aagataaatgttctactt 20611878  T
Q  786 aaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||| ||||||| ||||||||||| | |||||||||||      || | ||||||||||||||||||||||||||||||    
T  20611877 aaattttttaaacgataaatacaaggtgtcgtatatatacgacacatccaaaggtgaaaatcactaccgtatacatgag 20611799  T

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Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 767 - 852
Target Start/End: Complemental strand, 30121868 - 30121783
Alignment:
Q  767 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactac 852  Q
    ||||||||||||| ||||||||| |||||||| |||||||||| | ||| ||||||||   | || | ||||||||||||||||||    
T  30121868 aaagaacaatgttttatttaaattttttaaaaaataaatacaaggtgtcatatatatgcgatacatccaaaggtgaaaatcactac 30121783  T

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Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 775 - 864
Target Start/End: Original strand, 30832532 - 30832621
Alignment:
Q  775 atgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||||||||| || |||||||| ||||||||||   | ||||||||||| || |||| | || ||||||| |||||||||| ||||||    
T  30832532 atgttctatttacattttttaaaaaataaatacaagatgccgtatatatgtggtacacccagagatgaaaatgactaccgtatgcatgag 30832621  T

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Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 791 - 879
Target Start/End: Complemental strand, 4037030 - 4036942
Alignment:
Q  791 ttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccacc 879  Q
    |||||| |||||||||||| | | ||||||||| | || |||| |||||| || |||||||||||||| ||||| ||  ||||||||||    
T  4037030 ttttaagagataaatacaaggtgccgtatatatatggtacacccaaaggtaaagatcactaccgtatatatgaggaacttcaaaccacc 4036942  T

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Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 835 - 870
Target Start/End: Complemental strand, 27994807 - 27994772
Alignment:
Q  835 aaaggtgaaaatcactaccgtatacatgagaaatat 870  Q
    |||||||||||||||||||||||||||||| |||||    
T  27994807 aaaggtgaaaatcactaccgtatacatgaggaatat 27994772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1320 (Bit Score: 54; Significance: 2e-21; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 697 - 878
Target Start/End: Complemental strand, 1526 - 1346
Alignment:
Q  697 tacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatcttttaa 796  Q
    |||||||||| | |||| |||||||||||||||||| |||  |||||||||||||| |||         ||||||| |||||||||||||||  ||||||    
T  1526 tacgaatctgaaggctctgctctgtaagtgaaaagaagtccgtaataaaataaaaacgtatttttttt-aaaagaataatgttctatttaaaatttttaa 1428  T
Q  797 aagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccac 878  Q
    |||||||||| || | |  ||||||||| | | |||| ||| ||||||||||||| |||||||||||| ||  |||||||||    
T  1427 aagataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaaccac 1346  T

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Target: scaffold0097 (Bit Score: 53; Significance: 6e-21; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 771 - 879
Target Start/End: Complemental strand, 39024 - 38916
Alignment:
Q  771 aacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaatat 870  Q
    ||||||||||||||||||| ||||||||||||||||||| | ||||||||||||   | |||  ||| |||||||||||||||||||| ||||| ||  |    
T  39024 aacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcgatacacacaaatgtgaaaatcactaccgtatatatgaggaacct 38925  T
Q  871 caaaccacc 879  Q
    |||||||||    
T  38924 caaaccacc 38916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 697 - 752
Target Start/End: Complemental strand, 39100 - 39045
Alignment:
Q  697 tacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaa 752  Q
    |||||||||||| |||||  ||||||||| ||||||||||  ||||||||||||||    
T  39100 tacgaatctggaggctcgattctgtaagtaaaaagaggtccgtaataaaataaaaa 39045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 697 - 884
Target Start/End: Original strand, 230792 - 230976
Alignment:
Q  697 tacgaatctggaagctcggctctgtaagtgaaaagaggtctataataaaataaaaatgtannnnnnnnnaaaagaacaatgttctatttaaatcttttaa 796  Q
    |||||||| |||||||||| |||||||| ||||||||| |  ||||||||  ||||||||         |||||||||||||||||||||||| | ||||    
T  230792 tacgaatccggaagctcggatctgtaagggaaaagaggcccgtaataaaa--aaaatgtatatttttt-aaaagaacaatgttctatttaaatttgttaa 230888  T
Q  797 aagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccaccatccc 884  Q
    |||||||||  || | || |||||||||   |  ||| ||||||||||||||||||| |||||||||| ||  |||||||||| ||||    
T  230889 aagataaatttaaggtgttgtatatatgcgatatacccaaaggtgaaaatcactaccttatacatgaggaacttcaaaccaccctccc 230976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 46; Significance: 9e-17; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 772 - 877
Target Start/End: Original strand, 173515 - 173620
Alignment:
Q  772 acaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgagaaatatc 871  Q
    |||||||||||||||||| ||||||||||||||||||| |   ||||||||||   | |||| |||||| |||||||||||||||||| |||| ||  ||    
T  173515 acaatgttctatttaaattttttaaaagataaatacaaggtaccgtatatatgcgatacacccaaaggtaaaaatcactaccgtatacgtgaggaacctc 173614  T
Q  872 aaacca 877  Q
    ||||||    
T  173615 aaacca 173620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 793 - 852
Target Start/End: Original strand, 351360 - 351419
Alignment:
Q  793 ttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactac 852  Q
    ||||||||||||||||| | |||||||||||||||| |||| ||||||||||||| ||||    
T  351360 ttaaaagataaatacaaggtgtcgtatatatgttgtacacccaaaggtgaaaatcgctac 351419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 766 - 864
Target Start/End: Complemental strand, 1447 - 1349
Alignment:
Q  766 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacctaaaggtgaaaatcactaccgtatacatgag 864  Q
    |||||| || ||||||||||| || |||||||||||||||||||   | ||||||||||  || |||| | || ||||||| |||||||||||||||||    
T  1447 aaaagagcactgttctatttatattttttaaaagataaatacaagctgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgag 1349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 775 - 825
Target Start/End: Complemental strand, 183155 - 183105
Alignment:
Q  775 atgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgt 825  Q
    |||||||||||| || |||||||||||||||||||||  ||||||||||||    
T  183155 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgt 183105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 33; Significance: 0.000000005; HSPs: 2)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 835 - 879
Target Start/End: Complemental strand, 16062 - 16018
Alignment:
Q  835 aaaggtgaaaatcactaccgtatacatgagaaatatcaaaccacc 879  Q
    |||| ||||||||||||||||||||||||||||  ||||||||||    
T  16062 aaagatgaaaatcactaccgtatacatgagaaacctcaaaccacc 16018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 774 - 809
Target Start/End: Complemental strand, 16161 - 16126
Alignment:
Q  774 aatgttctatttaaatcttttaaaagataaatacaa 809  Q
    |||||||||||||||| |||||||||||||||||||    
T  16161 aatgttctatttaaattttttaaaagataaatacaa 16126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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