View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4823-Insertion-7 (Length: 228)
Name: NF4823-Insertion-7
Description: NF4823
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4823-Insertion-7 |
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Alignment Details
Target: chr8 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 8 - 200
Target Start/End: Complemental strand, 45110088 - 45109895
Alignment:
| Q |
8 |
gaacaaacccaaagcgaggtatatataaaagaaataattttcgatcggcttctcataactannnnnnnncttcttgttatgtacatgagtttatataatt |
107 |
Q |
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| T |
45110088 |
gaacaaatccaaagcgaggtatatataaaagaaataattttcgatcggcttctcataactattttttttcttcttgttatgtatatgggtttatataatt |
45109989 |
T |
|
| Q |
108 |
atat-tannnnnnnncacttatcaagatgttgcatggatgagtttatataannnnnnnnggatgacatacaatattttagtaacattttaagaa |
200 |
Q |
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| T |
45109988 |
atatattttttttttcacttatcaagatgttgcatggatgagtttatataattttttttggatgacatacaatgttttagtaacattttaagaa |
45109895 |
T |
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Target: chr7 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 8 - 200
Target Start/End: Original strand, 18583310 - 18583502
Alignment:
| Q |
8 |
gaacaaacccaaagcgaggtatatataaaagaaataattttcgatcggcttctcataacta-nnnnnnnncttcttgttatgtacatgagtttatataat |
106 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| | ||||||||||| ||||||||||| |
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| T |
18583310 |
gaacaaacccaaagcgaggtatatataaaagaaatagttttcgatcggcttctcataactattttttcttcttataattatgtacatgggtttatataat |
18583409 |
T |
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| Q |
107 |
tatattannnnnnnncacttatcaagatgttgcatggatgagtttatataannnnnnnnggatgacatacaatattttagtaacattttaagaa |
200 |
Q |
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| T |
18583410 |
tatatta-tttttttcacttatcaagatgttgcatggatgagttgatataaaaaaatttggatgacatacaatgtgttagtaacattttaagaa |
18583502 |
T |
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