View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4824-Insertion-7 (Length: 487)
Name: NF4824-Insertion-7
Description: NF4824
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4824-Insertion-7 |
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Alignment Details
Target: chr8 (Bit Score: 423; Significance: 0; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 423; E-Value: 0
Query Start/End: Original strand, 6 - 480
Target Start/End: Complemental strand, 26275650 - 26275176
Alignment:
| Q |
6 |
catttataaaggaaaaattggatgccaacttaaacttgcaaatgacaatgaagaattgggatggctagaaacttgtattcacgtgctcttggatcacaac |
105 |
Q |
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| T |
26275650 |
catttataaaggaaaaattggatactaacataaacttgcaaatgacaatgaagaattgggttggctagaaacttgtattcacgtgctcttggatcacatc |
26275551 |
T |
|
| Q |
106 |
tcaatgttgcaaatataaattgcggcgactgcaatcgtagcacttcgatacaggtacgatacattgcatgtaactgttgagacatttaagttttagatgt |
205 |
Q |
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| T |
26275550 |
tcaatgttgcaaatataaattgcggcgactgcaatcgtagcgcttcgatacaggtacgatgcattgcatgtaactgttgagacattgaagttttagatct |
26275451 |
T |
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| Q |
206 |
acatcagtgccaaaatacatgtcataaacccgcaacataatagcaggccaaatgaaacttcacatacaagcaatatggtcgacattttctacctggtgta |
305 |
Q |
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| T |
26275450 |
acatcagtgccaaaatacatgtcataaacccgcaacataatagcaggccaaatgaaacttcacatacaagcaatatggtcgacattttctacctggtgta |
26275351 |
T |
|
| Q |
306 |
agatttcatgttagttagtttttaccaactgcaatgccactgttctcacctttcccatcttcagtttgggcttcatattcacatcctcgacaatttgtca |
405 |
Q |
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| T |
26275350 |
atatttcatgttaggtagtttttaccaactgcaatgccactgttctcacctttcccatcttcagtttgatcttcatattcacatcctcgacaatttgtca |
26275251 |
T |
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| Q |
406 |
gtcacaagtaaccttaaacaaccttttgtttattactcagctgccacttggctgagttctttatatttattttcc |
480 |
Q |
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| T |
26275250 |
gtcacaagtaaccttaaacaaccttttgtttattactcagctgccacttggctgagttctttatatttattttcc |
26275176 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 303 - 371
Target Start/End: Original strand, 26250817 - 26250885
Alignment:
| Q |
303 |
gtaagatttcatgttagttagtttttaccaactgcaatgccactgttctcacctttcccatcttcagtt |
371 |
Q |
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||||||||||||||||| |||||| ||||| ||||||| ||| |||||||||||||||||||||||| |
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| T |
26250817 |
gtaagatttcatgttaggtagtttctaccacctgcaataccaactttctcacctttcccatcttcagtt |
26250885 |
T |
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