View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4824_high_4 (Length: 250)
Name: NF4824_high_4
Description: NF4824
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4824_high_4 |
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Alignment Details
Target: chr3 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 51933723 - 51933961
Alignment:
| Q |
1 |
ccatctattgctgttgggatctcaagcccaaacacttcagttttaatgtatttcgcattcaagagactgccagaatgaatggcatcaatgattttcctcg |
100 |
Q |
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| T |
51933723 |
ccatctattgctgttgggatctcaagcccaaacacttcagttttaatgtatttcgcattcaagagacagccagaatgaatggcatcaatgattttcctcg |
51933822 |
T |
|
| Q |
101 |
tgtacgctaacttgatccgattgcctgatccataactgccaaattacagggaagaaaaattagttttagtgaggaaaaaactaccatatatgcagttgca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51933823 |
tgtacgctaacttgatccgattgcctgatccataactgccaaattacagggaagaaaaattagttttagtgaggaaaaaactaccatatatgcagttgca |
51933922 |
T |
|
| Q |
201 |
ttgttagagttcacaccttccccctgaccagccagtatt |
239 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
51933923 |
ttgttagagttcacaccttccccctgaccagccagtatt |
51933961 |
T |
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