View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4825_high_6 (Length: 377)
Name: NF4825_high_6
Description: NF4825
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4825_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 1 - 372
Target Start/End: Original strand, 24598977 - 24599343
Alignment:
| Q |
1 |
tttgtgattcgagcgggagtgattagtccacattcgataaaaattggccaaataaattaaatgatgtataagtcttaaaatattctctnnnnnnnntctt |
100 |
Q |
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| T |
24598977 |
tttgtgattcgagcgggagtggttagtccacattagataaaaattggccaaataaattaaatgatgtataactcttaaaatattctctaaaaaatatctt |
24599076 |
T |
|
| Q |
101 |
accgtatatgattcatatatttaatgttgtaagattatagatggaggtgtaatgctatgactcgtaagtgttttgattatttgttcgttgttcacgatgc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| | |
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| T |
24599077 |
accgtatatgattcatatatttaatgttgtaagattttagatggaggtgtaatgctatgactcttaagtgttttgattatttgttcgatgttcacgatac |
24599176 |
T |
|
| Q |
201 |
tctctaatcttcgttaagtacaacacccacaccacacttatgatctgtgatcgtatttttaagattgaattggaacatgaaatcaaagattaaaaaaggc |
300 |
Q |
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||||||||||||||| ||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
24599177 |
tctctaatcttcgttgagtacaacacccacacc-----tatgatctctgatcatatttttaagattgaattggaacatgaaatcaaagattaaaatagga |
24599271 |
T |
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| Q |
301 |
atttataggttgaagagggtgggtccaacactagatgctagaggtgggttcactttttctgatgatgatgtc |
372 |
Q |
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||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |
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| T |
24599272 |
atttatacgctgaagagggtgggtccaacactagatgccagaggtgggttcactttttctaatgatgatgtc |
24599343 |
T |
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