View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4826-Insertion-10 (Length: 288)
Name: NF4826-Insertion-10
Description: NF4826
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4826-Insertion-10 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 176; Significance: 7e-95; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 29 - 288
Target Start/End: Original strand, 35501296 - 35501540
Alignment:
| Q |
29 |
cttgtcacctcattttattttatttttctnnnnnnngtaaacattgtatttaacatcaaaattttaatgcaaaatataatataatttcaataataaaact |
128 |
Q |
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| T |
35501296 |
cttgtcacctcattttattttatttttctaaaaaaagtaaacattgtatttaacatcaaa-------------atataatataatttcaataataaaact |
35501382 |
T |
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| Q |
129 |
aattatatcattcggaactcatgtgggtataatataggattggtgagattcataataacttcaataaaaaattattaaaatagtgtattagagagtctat |
228 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
35501383 |
aattatatcattcggaactcatgtgggtataatataggattggtgagattcataataactttaataaaaaattattaaaatagtgtattagagagtctat |
35501482 |
T |
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| Q |
229 |
taacgtgcacagatctacacataagacatttgggggcacactacccccataacatattta |
288 |
Q |
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|||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
35501483 |
taacatgcacagatctacacataagacatttggggg--cactacccccataacatattta |
35501540 |
T |
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