View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4826-Insertion-8 (Length: 390)
Name: NF4826-Insertion-8
Description: NF4826
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4826-Insertion-8 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 364; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 11 - 390
Target Start/End: Original strand, 5938575 - 5938954
Alignment:
| Q |
11 |
tgaggagtttctatgcttcattcaaattcataaaaatcaaataaaagaatcaaaagtctgtttatttttaaacaaccctttcagtttttactgtgtatgt |
110 |
Q |
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| T |
5938575 |
tgaggagtttctctgctttattcaaattcataaaaatcaaataaaagaatcaaaagtctgtttatttttaaacaaccctttcagtttttactgtgtatgt |
5938674 |
T |
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| Q |
111 |
gagtggctgaaaacaggaaacactagaagcaaacaaatactaaaatatttaaggtcttaaattagaacttatgcaagatattttgataaactcattgaaa |
210 |
Q |
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| T |
5938675 |
gagtggctgaaaacaggaaacactagaagcaaacaaatactaaaatgtttaaggtcttaaattagaacttatgcaagatattttgataaactcattgaaa |
5938774 |
T |
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| Q |
211 |
aatttagtgcatacctcttcctcagattttgcttttgcatttgaatttgaactaggtgagtctacagctctagtttttaacctctctatgatggatggag |
310 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5938775 |
aatttagtgcatacctcttcctcagattttgtttttgcatttgaatttgaactaggtgagtctacagctctagtttttaacctctctatgatggatggag |
5938874 |
T |
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| Q |
311 |
ttgaagtagggctaggactgcttgaactaagataaggaggtgtgctttgagtccccacatctcttgtcattccctctttc |
390 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5938875 |
ttgaagtagggctaggactgcttgaactaagataaggaggtgtgctttgagtccccacatctcttgtcattccctctttc |
5938954 |
T |
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