View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4829-Insertion-4 (Length: 583)
Name: NF4829-Insertion-4
Description: NF4829
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4829-Insertion-4 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 549; Significance: 0; HSPs: 20)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 549; E-Value: 0
Query Start/End: Original strand, 6 - 582
Target Start/End: Original strand, 3300662 - 3301236
Alignment:
| Q |
6 |
caagaagggtaggacccttgtaccagtcaagatttgtagagcgctcgatcatgttatctccctcaaaaccagagatgggaacaaatggaattttgtctgg |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3300662 |
caagaagggtaggacccttgtaccagtcaagatttgtagagcgctcgatcatgttatctccctcaaaaccagagatgggaacaaatggaattttgtctgg |
3300761 |
T |
|
| Q |
106 |
gttatagccaaccttcttcaaataggatgaaacttccttcacaatttcttcatacctacccttcgagtacttaggtgtagtggcatccatctgttcacga |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3300762 |
gttatagccaaccttcttcaaataggatgaaacttccttcacaatttcttcatacctacccttcgagtacttaggtgtagtggcatccatctgttcacga |
3300861 |
T |
|
| Q |
206 |
tagcaagacaatgagaatttgtataaataaagtaatcacagaaataatcaaatgcatcttcaaagggctaaaacgttcaaataccttgttgcagcaacga |
305 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
3300862 |
tagcaagacaatgagaatttgtataaataaagtaatcacagaaataatcaaatgcatcttcaaagggctaaaacgttcaaataccttgttgcagcaa-aa |
3300960 |
T |
|
| Q |
306 |
atcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggcttcaaaaccaccggtagtggaatcaa |
405 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
3300961 |
atcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgatataccggcttcaaaaccaccggtagtggaatcaa |
3301060 |
T |
|
| Q |
406 |
tgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaatgacagtgcagtagtacttagt |
505 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3301061 |
tgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaatgacagtgcagtagtacttagt |
3301160 |
T |
|
| Q |
506 |
agtctcaaacttccacagagcaatgtcaattgtggatacctctttcacgttcagccttgagcttgtcgagcacccaa |
582 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
3301161 |
agtctcaaacttccacagagcaatgtcaattgt-gatacctctttcacattcagccttgagcttgtcgagcacccaa |
3301236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 6 - 581
Target Start/End: Original strand, 43044928 - 43045499
Alignment:
| Q |
6 |
caagaagggtaggacccttgtaccagtcaagatttgtagagcgctcgatcatgttatctccctcaaaaccagagatgggaacaaatggaattttgtctgg |
105 |
Q |
| |
|
|||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43044928 |
caagaagggttggacccttgtaccagtcaaggtttgtagagcgctcgatcatgttatctccctcaaaaccagagatgggaacaaatggaattttgtctgg |
43045027 |
T |
|
| Q |
106 |
gttatagccaaccttcttcaaataggatgaaacttccttcacaatttcttcatacctacccttcgagtacttaggtgtagtggcatccatctgttcacga |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||| |||||||| ||||||||||||||| || |
|
|
| T |
43045028 |
gttatagccaaccttcttcaaataggatgaaacttccttcacaatttcatcatatctacccttggagtacttgggtgtagtagcatccatctgttcaaga |
43045127 |
T |
|
| Q |
206 |
tagcaagacaatgagaatttgta--taaataaagtaatcacagaaataatcaaatg--catcttcaaagggctaaaacgttcaaataccttgttgcagca |
301 |
Q |
| |
|
||| ||| |||| ||| |||||||| ||| | | |||||||||||| || |||||| ||||| ||| | ||||||||||||||| || |
|
|
| T |
43045128 |
tag-------atgcaaattagtacttaaataaatgaattataaaaataatcaaatatacaacttcaaggggctgaaaatattaaataccttgttgcaaca |
43045220 |
T |
|
| Q |
302 |
acgaatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggcttcaaaaccaccggtagtggaa |
401 |
Q |
| |
|
| |||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||| |
|
|
| T |
43045221 |
gcagatcatttgcttcacaccaagagtgaaagcaaggagagcatgttcacgggtctgaccatccttagaaataccggcttcaaaaccaccagtagtggaa |
43045320 |
T |
|
| Q |
402 |
tcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaatgacagtgcagtagtact |
501 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
43045321 |
tcaatgatgagaacggcacaatcagcttgggatgttccggtgatcatgttcttaatgaaatccctgtgtccgggggcatcgatgacagtgcagtagtact |
43045420 |
T |
|
| Q |
502 |
tagtagtctcaaacttccacagagcaatgtcaattgtggatacctctttcacgttcagccttgagcttgtcgagcaccca |
581 |
Q |
| |
|
| || |||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||| || ||||| |
|
|
| T |
43045421 |
tggttgtctcaaacttccagagagcaatgtcaatggt-gatacctctttcacgttcagccttgagcttgtcaaggaccca |
43045499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 6 - 582
Target Start/End: Complemental strand, 45984048 - 45983491
Alignment:
| Q |
6 |
caagaagggtaggacccttgtaccagtcaagatttgtagagcgctcgatcatgttatctccctcaaaaccagagatgggaacaaatggaattttgtctgg |
105 |
Q |
| |
|
|||||||||| |||||||||||||| |||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||| |||||| | |
|
|
| T |
45984048 |
caagaagggttggacccttgtaccaatcaagattagtagagcgctcaatcaagttatctccctcaaaaccagagatgggaacaattggaataa------g |
45983955 |
T |
|
| Q |
106 |
gttatagccaaccttcttcaaataggatgaaacttccttcacaatttcttcatacctacccttcgagtacttaggtgtagtggcatccatctgttcacga |
205 |
Q |
| |
|
|||||||||||||| |||||| ||| | |||||| | ||||||||||| |||||||| || | ||||| |||||||||||||||||||||||| | | |
|
|
| T |
45983954 |
tttatagccaaccttattcaaacagggtaaaacttgcctcacaatttctacatacctatccctagagtatttaggtgtagtggcatccatctgt-cgggg |
45983856 |
T |
|
| Q |
206 |
tagcaagacaatgagaatttgtataaataaagtaatcacagaaataatcaaatgca-tcttcaaagggctaaaacgttcaaataccttgttgcagcaacg |
304 |
Q |
| |
|
||| | || ||| || | || ||||||| || || | |||||||||||| || |||| || |||| ||| | |||||||||||||||||| | |
|
|
| T |
45983855 |
tag-atgataattagtacttatataaatgaattat----aaaaataatcaaatacaatcttaaaggggcggaaaatat-aaataccttgttgcagcagca |
45983762 |
T |
|
| Q |
305 |
aatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggcttcaaaaccaccggtagtggaatca |
404 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||||||||| |||||||||||||| |||| | |||||||||||||||||||| |||||||||||| |
|
|
| T |
45983761 |
gatcatttgattcacaccaagagtgaaggcaagaagagcatgttcacgggtctgaccattc------ataccggcttcaaaaccaccagtagtggaatca |
45983668 |
T |
|
| Q |
405 |
atgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaatgacagtgcagtagtacttag |
504 |
Q |
| |
|
|||| ||||||||||| ||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
45983667 |
atgacgagaacagcacagtcagcttgggacgttccggtgatcatgttcttaatgaaatccctgtgtccgggggcatcaatgacagtgcagttgtacttgt |
45983568 |
T |
|
| Q |
505 |
tagtctcaaacttccacagagcaatgtcaattgtggatacctctttcacgttcagccttgagcttgtcgagcacccaa |
582 |
Q |
| |
|
| |||||||||||| |||| | |||||||||||| | |||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
45983567 |
ttgtctcaaacttcgacagggtaatgtcaattgt-aacacctctttcacgttcagccttgagcttgtcaagcacccaa |
45983491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 284 - 581
Target Start/End: Original strand, 43045656 - 43045952
Alignment:
| Q |
284 |
aaataccttgttgcagcaacgaatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggcttca |
383 |
Q |
| |
|
||||||||||||||| || | |||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
43045656 |
aaataccttgttgcaacagcagatcatttgcttcacaccaagagtgaaagcaaggagagcatgttcacgggtctgaccatccttagaaataccggcttca |
43045755 |
T |
|
| Q |
384 |
aaaccaccggtagtggaatcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaa |
483 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
43045756 |
aaaccaccagtagtggaatcaatgatgagaacggcacaatcagcttgggatgttccggtgatcatgttcttaatgaaatccctgtgtccgggggcatcga |
43045855 |
T |
|
| Q |
484 |
tgacagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtggatacctctttcacgttcagccttgagcttgtcgagcaccca |
581 |
Q |
| |
|
||||||||||||||||||| || |||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||| || ||||| |
|
|
| T |
43045856 |
tgacagtgcagtagtacttggttgtctcaaacttccagagagcaatgtcaatggt-gatacctctttcacgttcagccttgagcttgtcaaggaccca |
43045952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 284 - 581
Target Start/End: Complemental strand, 43066751 - 43066455
Alignment:
| Q |
284 |
aaataccttgttgcagcaacgaatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggcttca |
383 |
Q |
| |
|
||||||||||||||| || | |||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
43066751 |
aaataccttgttgcaacagcagatcatttgcttcacaccaagagtgaaagcaaggagagcatgttcacgggtctgaccatccttagaaataccggcttca |
43066652 |
T |
|
| Q |
384 |
aaaccaccggtagtggaatcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaa |
483 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
43066651 |
aaaccaccagtagtggaatcaatgatgagaacggcacaatcagcttgggatgttccggtgatcatgttcttaatgaaatccctgtgtccgggggcatcga |
43066552 |
T |
|
| Q |
484 |
tgacagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtggatacctctttcacgttcagccttgagcttgtcgagcaccca |
581 |
Q |
| |
|
||||||||||||||||||| || |||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||| || ||||| |
|
|
| T |
43066551 |
tgacagtgcagtagtacttggttgtctcaaacttccagagagcaatgtcaatggt-gatacctctttcacgttcagccttgagcttgtcaagaaccca |
43066455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 284 - 581
Target Start/End: Original strand, 43084084 - 43084380
Alignment:
| Q |
284 |
aaataccttgttgcagcaacgaatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggcttca |
383 |
Q |
| |
|
||||||||||||||| || | |||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
43084084 |
aaataccttgttgcaacagcagatcatttgcttcacaccaagagtgaaagcaaggagagcatgttcacgggtctgaccatccttagaaataccggcttca |
43084183 |
T |
|
| Q |
384 |
aaaccaccggtagtggaatcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaa |
483 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
43084184 |
aaaccaccagtagtggaatcaatgatgagaacggcacaatcagcttgggatgttccggtgatcatgttcttaatgaaatccctgtgtccgggggcatcga |
43084283 |
T |
|
| Q |
484 |
tgacagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtggatacctctttcacgttcagccttgagcttgtcgagcaccca |
581 |
Q |
| |
|
||||||||||||||||||| || |||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||| || ||||| |
|
|
| T |
43084284 |
tgacagtgcagtagtacttggttgtctcaaacttccagagagcaatgtcaatggt-gatacctctttcacgttcagccttgagcttgtcaaggaccca |
43084380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 284 - 582
Target Start/End: Complemental strand, 45993568 - 45993271
Alignment:
| Q |
284 |
aaataccttgttgcagcaacgaatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggcttca |
383 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| |||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
45993568 |
aaataccttgttgcagcaacagatcatttgattcacaccaagagtgaaggcaagaagagcatgttcacgagtctgaccatcctttgaaataccggcttca |
45993469 |
T |
|
| Q |
384 |
aaaccaccggtagtggaatcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaa |
483 |
Q |
| |
|
||||||| ||||||||||||||||| ||||||||||||||||||||||| || || || ||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
45993468 |
aaaccacgagtagtggaatcaatgatgagaacagcacaatcagcttgggacgtcccggtgatcatgttcttaatgaaatccctgtgtccggaggcatcaa |
45993369 |
T |
|
| Q |
484 |
tgacagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtggatacctctttcacgttcagccttgagcttgtcgagcacccaa |
582 |
Q |
| |
|
||||||||||| |||||| | |||||||||||| ||| || | |||||||||| ||||||||||||||| |||| |||||||||||| ||||||||| |
|
|
| T |
45993368 |
tgacagtgcagctgtacttgtttgtctcaaacttcgacaaagaactgtcaattgt-gatacctctttcacgctcagtcttgagcttgtcaagcacccaa |
45993271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 6 - 208
Target Start/End: Complemental strand, 43067063 - 43066861
Alignment:
| Q |
6 |
caagaagggtaggacccttgtaccagtcaagatttgtagagcgctcgatcatgttatctccctcaaaaccagagatgggaacaaatggaattttgtctgg |
105 |
Q |
| |
|
|||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43067063 |
caagaagggttggacccttgtaccagtcaaggtttgtagagcgctcgatcatgttatctccctcaaaaccagagatgggaacaaatggaattttgtctgg |
43066964 |
T |
|
| Q |
106 |
gttatagccaaccttcttcaaataggatgaaacttccttcacaatttcttcatacctacccttcgagtacttaggtgtagtggcatccatctgttcacga |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||| |||||||| ||||||||||||||| || |
|
|
| T |
43066963 |
gttatagccaaccttcttcaaataggatgaaacttccttcacaatttcatcatatctacccttggagtacttgggtgtagtagcatccatctgttcaaga |
43066864 |
T |
|
| Q |
206 |
tag |
208 |
Q |
| |
|
||| |
|
|
| T |
43066863 |
tag |
43066861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 6 - 208
Target Start/End: Original strand, 43083772 - 43083974
Alignment:
| Q |
6 |
caagaagggtaggacccttgtaccagtcaagatttgtagagcgctcgatcatgttatctccctcaaaaccagagatgggaacaaatggaattttgtctgg |
105 |
Q |
| |
|
|||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43083772 |
caagaagggttggacccttgtaccagtcaaggtttgtagagcgctcgatcatgttatctccctcaaaaccagagatgggaacaaatggaattttgtctgg |
43083871 |
T |
|
| Q |
106 |
gttatagccaaccttcttcaaataggatgaaacttccttcacaatttcttcatacctacccttcgagtacttaggtgtagtggcatccatctgttcacga |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||| |||||||| ||||||||||||||| || |
|
|
| T |
43083872 |
gttatagccaaccttcttcaaataggatgaaacttccttcacaatttcatcatatctacccttggagtacttgggtgtagtagcatccatctgttcaaga |
43083971 |
T |
|
| Q |
206 |
tag |
208 |
Q |
| |
|
||| |
|
|
| T |
43083972 |
tag |
43083974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 284 - 582
Target Start/End: Complemental strand, 38137936 - 38137639
Alignment:
| Q |
284 |
aaataccttgttgcagcaacgaatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggcttca |
383 |
Q |
| |
|
|||||||||||||||||| | |||||||| |||||||||| ||| ||||||||||| |||||| |||||| || |||| ||| ||| |||||| |
|
|
| T |
38137936 |
aaataccttgttgcagcagcagatcatttggcgcacaccaagaacgaatgcaagaagagcatgttcagaggtctgaccttcctgagaataaccagcttca |
38137837 |
T |
|
| Q |
384 |
aaaccaccggtagtggaatcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaa |
483 |
Q |
| |
|
|||| ||| || ||||||||||||| ||||||||||| ||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38137836 |
aaactaccagttgtggaatcaatgacgagaacagcacagtcagcttgggacgtcccggtaatcatgttcttaatgaaatccctgtgtccgggggcatcaa |
38137737 |
T |
|
| Q |
484 |
tgacagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtggatacctctttcacgttcagccttgagcttgtcgagcacccaa |
582 |
Q |
| |
|
||| ||||||||||||||| |||||||||||||| |||||| ||||||||| || ||||||||||||||| || |||||||||||||||||||||||| |
|
|
| T |
38137736 |
tgagagtgcagtagtacttggtagtctcaaactttgacagagaaatgtcaatagt-gatacctctttcacgctcggccttgagcttgtcgagcacccaa |
38137639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 6 - 150
Target Start/End: Complemental strand, 43076918 - 43076774
Alignment:
| Q |
6 |
caagaagggtaggacccttgtaccagtcaagatttgtagagcgctcgatcatgttatctccctcaaaaccagagatgggaacaaatggaattttgtctgg |
105 |
Q |
| |
|
|||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |
|
|
| T |
43076918 |
caagaagggttggacccttgtaccagttaaggtttgtagagcgctcgatcatgttatctccctcaaaaccagagatgggaacaaatggaatgttttctgg |
43076819 |
T |
|
| Q |
106 |
gttatagccaaccttcttcaaataggatgaaacttccttcacaat |
150 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
43076818 |
gttatagccaaccttcttcaaataggatgaaacttcctccacaat |
43076774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 353 - 582
Target Start/End: Complemental strand, 7888786 - 7888558
Alignment:
| Q |
353 |
ggtctgcccatcctttgaaataccggcttcaaaaccaccggtagtggaatcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttc |
452 |
Q |
| |
|
|||||| |||||||| ||| |||||||||||||||||| || |||||||||||||| ||||||||||||||||||| || | || || ||||||||| |
|
|
| T |
7888786 |
ggtctgaccatccttacaaaaaccggcttcaaaaccaccagttgtggaatcaatgatgagaacagcacaatcagcttcagacgccccggtgatcatgttc |
7888687 |
T |
|
| Q |
453 |
ttaatgaaatccctgtgtccgggggcatcaatgacagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtggatacctctttca |
552 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||| ||||||| |||| | || |||| ||||||||| |||| |||||||||||| ||||||||||||| |
|
|
| T |
7888686 |
ttgatgaaatccctgtgtccgggggcatcaatgagagtgcagcagtagctggttgtctgaaacttccaaagagaaatgtcaattgt-gatacctctttca |
7888588 |
T |
|
| Q |
553 |
cgttcagccttgagcttgtcgagcacccaa |
582 |
Q |
| |
|
|| ||||||||||| ||||| ||||||||| |
|
|
| T |
7888587 |
cgctcagccttgagtttgtcaagcacccaa |
7888558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 6 - 199
Target Start/End: Complemental strand, 38138212 - 38138019
Alignment:
| Q |
6 |
caagaagggtaggacccttgtaccagtcaagatttgtagagcgctcgatcatgttatctccctcaaaaccagagatgggaacaaatggaattttgtctgg |
105 |
Q |
| |
|
|||||||||| |||||||| ||||||||||| || |||||||| || || ||||||||||||||||||||||||||||||||||||||||||| ||| | |
|
|
| T |
38138212 |
caagaagggtgggacccttataccagtcaaggttagtagagcgttcaatgatgttatctccctcaaaaccagagatgggaacaaatggaatttcatctag |
38138113 |
T |
|
| Q |
106 |
gttatagccaaccttcttcaaataggatgaaacttccttcacaatttcttcatacctacccttcgagtacttaggtgtagtggcatccatctgt |
199 |
Q |
| |
|
|||||||||||| | ||||| ||| ||||| ||||||||||||||||||||||||| |||| ||||| || ||||||||||||||||||||| |
|
|
| T |
38138112 |
gttatagccaacatcaatcaaaaagggtgaaaattccttcacaatttcttcatacctatccttggagtatttgggtgtagtggcatccatctgt |
38138019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 318 - 582
Target Start/End: Complemental strand, 7891086 - 7890823
Alignment:
| Q |
318 |
acaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggcttcaaaaccaccggtagtggaatcaatgatcagaacag |
417 |
Q |
| |
|
|||||||||| ||| ||||| || | |||||| |||||| |||| ||| ||| ||| || ||||||||||| || ||||||||||| ||||||| |
|
|
| T |
7891086 |
acaccaagagcgaatgcaagttgaacatgttcagtggtctgaccattcttacaaaaaccagcgtcaaaaccaccaagtgtagaatcaatgataagaacag |
7890987 |
T |
|
| Q |
418 |
cacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaatgacagtgcagtagtacttagtagtctcaaactt |
517 |
Q |
| |
|
|||| ||||||| ||| | |||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||| | | || || ||||||||||| |
|
|
| T |
7890986 |
cacagtcagcttcggacgctccagtgatcatgttcttaatgaaatccctgtgtccaggggcatcaatgagagtgcagcggaagttggttgtctcaaactt |
7890887 |
T |
|
| Q |
518 |
ccacagagcaatgtcaattgtggatacctctttcacgttcagccttgagcttgtcgagcacccaa |
582 |
Q |
| |
|
|||||||| |||||||||||| ||||||||||||||| || |||||||||||||| ||||||||| |
|
|
| T |
7890886 |
ccacagagaaatgtcaattgt-gatacctctttcacgctcggccttgagcttgtcaagcacccaa |
7890823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 10 - 582
Target Start/End: Complemental strand, 40035041 - 40034479
Alignment:
| Q |
10 |
aagggtaggacccttgtaccagtcaagatttgtagagcgctcgatcatgttatctccctcaaaaccagagatgggaacaaatggaattttgtctgggtta |
109 |
Q |
| |
|
|||||| ||||| |||||||| ||||| || ||||||||||| || ||||| ||||| |||||||||| ||||||| ||||||||| | | ||||| |
|
|
| T |
40035041 |
aagggtgggacctttgtaccaatcaaggttagtagagcgctcaatgatgttttctccaacaaaaccagatatgggaataaatggaatgtcagataggtta |
40034942 |
T |
|
| Q |
110 |
tagccaaccttcttcaaataggatgaaacttccttcacaatttcttcatacctacccttcgagtacttaggtgtagtggcatccatctgttcacgatagc |
209 |
Q |
| |
|
||||||||||| ||||| || || | | | |||||| ||||||| |||||||||| ||||| || |||||||| |||||||||||| || ||||| |
|
|
| T |
40034941 |
tagccaaccttgatcaaaaggggggagaaattcgtcacaagttcttcaaacctacccttagagtatttgggtgtagttgcatccatctgt-caagatag- |
40034844 |
T |
|
| Q |
210 |
aagacaatgagaatttg-tataaataaagtaatcacagaaataatcaaatgcatcttcaaaggg-ctaaaacgttcaaataccttgttgcagcaacgaat |
307 |
Q |
| |
|
| || ||| || | || ||||||| || || | | |||||| ||||| || ||| |||||| || || | |||||||||||||||||| | || |
|
|
| T |
40034843 |
atgataattagtacttaatataaatgaactataaataaaaataaacaaatacaactttaaaggggctggaaatat-aaataccttgttgcagcagcagat |
40034745 |
T |
|
| Q |
308 |
catttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggcttcaaaaccaccggtagtggaatcaatg |
407 |
Q |
| |
|
|||||| |||||||||||||| | ||||||||||| |||||| |||||| |||| ||| |||| | ||||||| ||| || ||||||||||| |
|
|
| T |
40034744 |
catttgattcacaccaagagtataggcaagaagagcatgttcagtggtctgaccat----tga--taccagtctcaaaactaccagttctggaatcaatg |
40034651 |
T |
|
| Q |
408 |
atcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaatgacagtgcagtagtacttagtag |
507 |
Q |
| |
|
|| ||||||||||| |||||| |||| || || || | ||||||||| ||||||| |||||||||||||| ||||||| |||||||| ||| || || | |
|
|
| T |
40034650 |
atgagaacagcacagtcagctagggacgtgccggttaacatgttcttgatgaaat--ctgtgtccgggggcgtcaatgagagtgcagtggtatttggttg |
40034553 |
T |
|
| Q |
508 |
tctcaaacttccacagagcaatgtcaattgtggatacctctttcacgttcagccttgagcttgtcgagcacccaa |
582 |
Q |
| |
|
|||||||||| ||| | ||| |||||||| | |||||||||||| ||||||||||||||||| || |||||| |
|
|
| T |
40034552 |
tctcaaacttggacatggaaatatcaattgt-aacacctctttcacgctcagccttgagcttgtcaagtacccaa |
40034479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 402 - 572
Target Start/End: Complemental strand, 43076746 - 43076578
Alignment:
| Q |
402 |
tcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaatgacagtgcagtagtact |
501 |
Q |
| |
|
|||| ||| |||| |||||||||||||||||| || ||||| ||||||||||||||||||| | ||||||| ||| ||||||||||| |||| ||| || |
|
|
| T |
43076746 |
tcaaggataagaagagcacaatcagcttgggacgtcccagtgatcatgttcttaatgaaattcttgtgtcccgggacatcaatgacaacgcagcagttct |
43076647 |
T |
|
| Q |
502 |
tagtagtctcaaacttccacagagcaatgtcaattgtggatacctctttcacgttcagccttgagcttgtc |
572 |
Q |
| |
|
| || |||||||||||||| |||| ||| ||||| || ||||||||||||||||||||| |||||||||| |
|
|
| T |
43076646 |
ttgttgtctcaaacttccagagagaaatctcaatggt--atacctctttcacgttcagccctgagcttgtc |
43076578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 345 - 582
Target Start/End: Original strand, 51291886 - 51292121
Alignment:
| Q |
345 |
tgttcacgggtctgcccatcctttgaaataccggcttcaaaaccaccggtagtggaatcaatgatcagaacagcacaatcagcttgggatgttccagtaa |
444 |
Q |
| |
|
||||||| |||||| |||||||| ||| ||| |||||||| || || || |||||||||| ||| |||| | |||| ||||||||| | | || | | |
|
|
| T |
51291886 |
tgttcaccggtctgaccatccttagaataaccagcttcaaacccgccagttgtggaatcaaggatgagaataacacagtcagcttggaacggcccggcga |
51291985 |
T |
|
| Q |
445 |
tcatgttcttaatgaaatccctgtgtccgggggcatcaatgacagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtggatac |
544 |
Q |
| |
|
|||||||||||||||||| || ||||||||||||||||||| |||||| |||||||| | || |||||||| | |||| |||||||||||| ||||| |
|
|
| T |
51291986 |
tcatgttcttaatgaaattcccatgtccgggggcatcaatgagagtgcaatagtacttgattgt-tcaaacttggatagagaaatgtcaattgt-gatac |
51292083 |
T |
|
| Q |
545 |
ctctttcacgttcagccttgagcttgtcgagcacccaa |
582 |
Q |
| |
|
|||||||||| |||||||||| |||||| ||||||||| |
|
|
| T |
51292084 |
ctctttcacgctcagccttgaacttgtcaagcacccaa |
51292121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 10 - 199
Target Start/End: Original strand, 50912311 - 50912503
Alignment:
| Q |
10 |
aagggtaggacccttgtaccagtcaagatttgtagagcgctcgatcatgttatctccctcaaaaccagagatgggaacaaatggaattttgtctgggtt- |
108 |
Q |
| |
|
|||||| ||||| |||||||||||||| || ||||||||||| || ||||||||||||||||||||||||||||||| ||| ||||||| ||| | || |
|
|
| T |
50912311 |
aagggtgggacctttgtaccagtcaaggttagtagagcgctcaatgatgttatctccctcaaaaccagagatgggaataaacggaatttcatctagatta |
50912410 |
T |
|
| Q |
109 |
--atagccaaccttcttcaaataggatgaaacttccttcacaatttcttcatacctacccttcgagtacttaggtgtagtggcatccatctgt |
199 |
Q |
| |
|
|||||||||| |||| | | ||| ||||| ||| ||||||||||||||||||||||| ||||| || || ||||| |||||||||||| |
|
|
| T |
50912411 |
tcatagccaaccctctttagaaagggtgaaaggatcttaacaatttcttcatacctacccttggagtatttgggagtagtagcatccatctgt |
50912503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 6 - 197
Target Start/End: Complemental strand, 7891304 - 7891113
Alignment:
| Q |
6 |
caagaagggtaggacccttgtaccagtcaagatttgtagagcgctcgatcatgttatctccctcaaaaccagagatgggaacaaatggaattttgtctgg |
105 |
Q |
| |
|
|||||||||| |||||| ||||||| ||||| || | ||||||||| || |||||||||||||| |||||||||| || | ||| |||||||| || | |
|
|
| T |
7891304 |
caagaagggtgggacccgtgtaccaatcaaggttagaagagcgctcaatgatgttatctccctcgtaaccagagatagggataaaaggaattttacctag |
7891205 |
T |
|
| Q |
106 |
gttatagccaaccttcttcaaataggatgaaacttccttcacaatttcttcatacctacccttcgagtacttaggtgtagtggcatccatct |
197 |
Q |
| |
|
|||||||||||||| ||||| ||| ||||| || ||||||||| |||||||||| |||| ||||| || ||||||||||||||||||| |
|
|
| T |
7891204 |
gttatagccaacctcactcaaaaagggtgaaatttgactcacaatttgttcatacctatccttggagtatttgggtgtagtggcatccatct |
7891113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 7888938 - 7888848
Alignment:
| Q |
107 |
ttatagccaaccttcttcaaataggatgaaacttccttcacaatttcttcatacctacccttcgagtacttaggtgtagtggcatccatct |
197 |
Q |
| |
|
||||||||||||| ||||| ||| |||||||| |||||||||||||||||||| ||| ||||| | ||||||||||||||||||| |
|
|
| T |
7888938 |
ttatagccaacctctctcaaaaagggtgaaacttgattcacaatttcttcatacctgtcctaggagtatatgggtgtagtggcatccatct |
7888848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 318; Significance: 1e-179; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 6 - 582
Target Start/End: Original strand, 4231393 - 4231973
Alignment:
| Q |
6 |
caagaagggtaggacccttgtaccagtcaagatttgtagagcgctcgatcatgttatctccctcaaaaccagagatgggaacaaatggaattttgtctgg |
105 |
Q |
| |
|
||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
4231393 |
caagaagtgttggacccttgtaccagtcaagatttgtagagcgctcaatcatgttatctccctcaaaaccagagatgggaacaaatggaattttatctgg |
4231492 |
T |
|
| Q |
106 |
gttatagccaaccttcttcaaataggatgaaacttccttcacaatttcttcatacctacccttcgagtacttaggtgtagtggcatccatctgttcacga |
205 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| | ||| |||||||| || |||||||| |||||||||||| || |
|
|
| T |
4231493 |
gttatagccaaccttcttcatgtaggatgatacttccttcacaatttcatcatacctgctcttggagtacttgggagtagtggcgtccatctgttcaaga |
4231592 |
T |
|
| Q |
206 |
tagcaagacaatgagaatttgtataaataaagtaatcacagaaataatcaaatgcatcttcaaaggg----ctaaaac------gttcaaataccttgtt |
295 |
Q |
| |
|
|||||| | ||| || | |||||||| ||| || | ||||| |||||||| || ||||||| | |||| |||||||||||||||| |
|
|
| T |
4231593 |
tagcaaaa-aatcagtacttgtataagcaaattat----aaaaatatccaaatgcaactacaaaggggaatcaaaaaatttacagttcaaataccttgtt |
4231687 |
T |
|
| Q |
296 |
gcagcaacgaatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggcttcaaaaccaccggta |
395 |
Q |
| |
|
|||||| | ||||||||| |||||||||||||||||||||| ||||| |||||||| ||||| |||||||| |||||||| |||||||||||||| || |
|
|
| T |
4231688 |
gcagcagcagatcatttgcctcacaccaagagtgaaagcaaggagagcatgttcacgagtctgaccatccttggaaataccagcttcaaaaccaccagtg |
4231787 |
T |
|
| Q |
396 |
gtggaatcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaatgacagtgcagt |
495 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
4231788 |
gtggaatcaatgatgagaacagcacaatcagcttgggatgtaccagtaatcatgttcttaatgaaatccctgtgtccaggggcatcaatgacagtgcagt |
4231887 |
T |
|
| Q |
496 |
agtacttagtagtctcaaacttccacagagcaatgtcaattgtggatacctctttcacgttcagccttgagcttgtcgagcacccaa |
582 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| || |||||| |
|
|
| T |
4231888 |
agtacttagtggtctcaaacttccacagagcaatgtcaattgt-gatacctctttcacgctcagccttgagcttgtcaagaacccaa |
4231973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 141; Significance: 1e-73; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 285 - 581
Target Start/End: Original strand, 16349349 - 16349644
Alignment:
| Q |
285 |
aataccttgttgcagcaacgaatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggcttcaa |
384 |
Q |
| |
|
||||||||||||||||| | ||||||||||| |||||||||| | ||||| | ||||| ||||||||| |||| |||| || |||||||||||| ||| |
|
|
| T |
16349349 |
aataccttgttgcagcagcagatcatttgcttgacaccaagagagtaagcatggagagcatgttcacggatctgaccattattggaaataccggctccaa |
16349448 |
T |
|
| Q |
385 |
aaccaccggtagtggaatcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaat |
484 |
Q |
| |
|
||||| | | ||||||||||| ||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16349449 |
aaccagcaggagtggaatcaacgataagaagagcacaatcagcttgggatgtcccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaat |
16349548 |
T |
|
| Q |
485 |
gacagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtggatacctctttcacgttcagccttgagcttgtcgagcaccca |
581 |
Q |
| |
|
|| ||||||| |||||| || |||||||| ||| ||| || | |||||||||| |||||||||||| || ||||||||||| ||||| || ||||| |
|
|
| T |
16349549 |
gatagtgcagcggtacttggttgtctcaaaattcaacatagaattgtcaattgt-gatacctctttcgcgctcagccttgagtttgtcaagaaccca |
16349644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 6 - 164
Target Start/End: Original strand, 16349075 - 16349233
Alignment:
| Q |
6 |
caagaagggtaggacccttgtaccagtcaagatttgtagagcgctcgatcatgttatctccctcaaaaccagagatgggaacaaatggaattttgtctgg |
105 |
Q |
| |
|
|||||||||| ||||||||||||| ||||| ||||||||| |||| | || ||||||||||||||||||||||||||||||||||| || || |||| | |
|
|
| T |
16349075 |
caagaagggtgggacccttgtacccatcaagttttgtagagggctcaaccaagttatctccctcaaaaccagagatgggaacaaatgtaacttcgtcttg |
16349174 |
T |
|
| Q |
106 |
gttatagccaaccttcttcaaataggatgaaacttccttcacaatttcttcatacctac |
164 |
Q |
| |
|
||||||||||| ||| ||||| ||||||| || |||||||||||||| |||||| |
|
|
| T |
16349175 |
tttatagccaacgttcatcaaaattgatgaaagttgactcacaatttcttcaaacctac |
16349233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 134; Significance: 2e-69; HSPs: 7)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 6 - 582
Target Start/End: Original strand, 4619617 - 4620196
Alignment:
| Q |
6 |
caagaagggtaggacccttgtaccagtcaagatttgtagagcgctcgatcatgttatctccctcaaaaccagagatgggaacaaatggaattttgtctgg |
105 |
Q |
| |
|
|||||||||| ||||||| ||||||||||||||| | ||| ||||| |||| ||||||||||||||||||||||||||||||||||| |||||| | || |
|
|
| T |
4619617 |
caagaagggtgggaccctcgtaccagtcaagattagaagaacgctcaatcaagttatctccctcaaaaccagagatgggaacaaatgtaatttttttagg |
4619716 |
T |
|
| Q |
106 |
gttatagccaaccttcttcaaataggatgaaacttccttcacaatttcttcatacctacccttcgagtacttaggtgtagtggcatccatctgttcacga |
205 |
Q |
| |
|
||||||||||| | ||| |||| || ||||| | ||||||| ||||||||||||| ||| ||||| || |||| |||||||||||||| | || || |
|
|
| T |
4619717 |
gttatagccaatcctctccaaaaagtgtgaaaaacctttcacaaattcttcatacctatacttggagtatttgggtgcagtggcatccatctat-caaga |
4619815 |
T |
|
| Q |
206 |
tagcaagacaatgagaatttgtataaataaagtaatcacagaaataatcaaa-tgcatcttcaaaggg-ctaaaacgttcaaataccttgttgcagcaac |
303 |
Q |
| |
|
||| | || ||| || | || ||||||| || |||| | | |||||| ||| | || ||| ||||| || ||| | ||||||||||||| |||| | |
|
|
| T |
4619816 |
tag-atgaaaattagtaattatataaatgaa-taataaaaataataattaaaatacaactttgaaggggctgaaaatat-aaataccttgttgtagcagc |
4619912 |
T |
|
| Q |
304 |
gaatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggct------tcaaaaccaccggtagt |
397 |
Q |
| |
|
|||||||||||||||||||| || |||||||| | ||| |||||| || |||| | | || | |||||| | | | ||| | ||| ||||| |
|
|
| T |
4619913 |
agatcatttgcttcacaccaagggttaaagcaaggacagcatgttcatggatctgacgaaccctagaaatagcagtttcagagtcagatccaatagtagt |
4620012 |
T |
|
| Q |
398 |
ggaatcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaatgacagtgcagtag |
497 |
Q |
| |
|
|||||| | ||||||||||| ||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||| |||||||||| |
|
|
| T |
4620013 |
agaatcatatacgagaacagcacagtcagcttgggatgttccggtgatcatgttcttaatgaaatctctgtgtccgggggcatcaatgagagtgcagtag |
4620112 |
T |
|
| Q |
498 |
tacttagtagtctcaaacttccacagagcaatgtcaattgtggatacctctttcacgttcagccttgagcttgtcgagcacccaa |
582 |
Q |
| |
|
||||| || ||||||||||| |||||| |||||| ||||| ||||||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
4620113 |
tacttggttgtctcaaacttggacagagaaatgtcgattgt-gatacctctttcacgctcagccttgagcttgtcaagcacccaa |
4620196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 6 - 582
Target Start/End: Original strand, 4297410 - 4297979
Alignment:
| Q |
6 |
caagaagggtaggacccttgtaccagtcaagatttgtagagcgctcgatcatgttatctccctcaaaaccagagatgggaacaaatggaattttgtctgg |
105 |
Q |
| |
|
|||||||||| ||||||||||||||||||| ||| || ||||| || |||| ||||||||| ||||||| ||||||||||| ||||||||||| | ||| |
|
|
| T |
4297410 |
caagaagggtgggacccttgtaccagtcaaaattagtggagcggtcaatcaagttatctccgtcaaaactagagatgggaataaatggaatttcatatgg |
4297509 |
T |
|
| Q |
106 |
gttatagccaaccttcttcaaataggatgaaacttccttcacaatttcttcatacctacccttcgagtacttaggtgtagtggcatccatctgttcacga |
205 |
Q |
| |
|
|||||||||||||| ||||||||| | |||||| || |||| | |||||||| || | ||||| || ||||||||||||||||||||| | || |
|
|
| T |
4297510 |
cttatagccaaccttgatcaaataggttaaaacttgctctgatatttttacatacctatccatggagtatttgggtgtagtggcatccatctgtgaa-ga |
4297608 |
T |
|
| Q |
206 |
tagc--aagacaatgagaatttgtataaataaagtaatcacagaaataatcaaatgca-tcttcaaagggctaaaacgttcaaataccttgttgcagcaa |
302 |
Q |
| |
|
||| | || ||| || |||| || |||| || || | |||||||||||| || |||| || ||||||||| | ||||||||||||||||||| |
|
|
| T |
4297609 |
tagatgatgataattagtatttatacaaatgaattat----aaaaataatcaaatacaatcttaaacgggctaaaaa-tacaaataccttgttgcagcag |
4297703 |
T |
|
| Q |
303 |
cgaatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggcttcaaaaccaccggtag---tgg |
399 |
Q |
| |
|
| || ||||| ||| |||||||| |||| ||||||||||| |||||| |||||| ||| | |||||||||||||||||||| |||| ||| |
|
|
| T |
4297704 |
cagataatttgattcgcaccaagattgaaggcaagaagagcatgttcaaaggtctgaccaatc------ataccggcttcaaaaccaccagtagtagtgg |
4297797 |
T |
|
| Q |
400 |
aatcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaatgacagtgcagtagta |
499 |
Q |
| |
|
||||||||| |||||| |||| | |||| |||| | |||||| |||||||||||||| | ||||| ||||||||||||||||||||| |||||| ||| |
|
|
| T |
4297798 |
aatcaatgacgagaacatcacagttagctagggacgctccagtggtcatgttcttaatgcattccctatgtccgggggcatcaatgacaatgcagttgta |
4297897 |
T |
|
| Q |
500 |
cttagtagtctcaaacttccacagagcaatgtcaattgtggatacctctttcacgttcagccttgagcttgtcgagcacccaa |
582 |
Q |
| |
|
||| | ||||||||||| |||||| |||||||||||||| |||||||||| | ||||| ||||| ||||| || |||||| |
|
|
| T |
4297898 |
cttgtttgtctcaaacttggacagagaaatgtcaattgtgg-cacctctttcatggtcagctttgagtttgtcaagtacccaa |
4297979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 353 - 582
Target Start/End: Original strand, 1846670 - 1846898
Alignment:
| Q |
353 |
ggtctgcccatcctttgaaataccggcttcaaaaccaccggtagtggaatcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttc |
452 |
Q |
| |
|
|||||| |||| ||| ||| ||| |||||||||||||| | || || |||||||| ||||| ||||| ||||||| ||||| ||| || ||||||||| |
|
|
| T |
1846670 |
ggtctgaccattcttacaaaaaccagcttcaaaaccaccaggtgtagagtcaatgataagaacggcacagtcagcttcggatgctccggtgatcatgttc |
1846769 |
T |
|
| Q |
453 |
ttaatgaaatccctgtgtccgggggcatcaatgacagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtggatacctctttca |
552 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||| | | || || |||||||||||||| |||| |||||||||||| ||||||||||||| |
|
|
| T |
1846770 |
ttaatgaaatccctgtgtccgggggcatcaatgagagtgcagaggaagttggttgtctcaaacttccatagagaaatgtcaattgt-gatacctctttca |
1846868 |
T |
|
| Q |
553 |
cgttcagccttgagcttgtcgagcacccaa |
582 |
Q |
| |
|
|| || |||||||||||||| ||||||||| |
|
|
| T |
1846869 |
cgctcggccttgagcttgtcaagcacccaa |
1846898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 6 - 197
Target Start/End: Original strand, 1846417 - 1846608
Alignment:
| Q |
6 |
caagaagggtaggacccttgtaccagtcaagatttgtagagcgctcgatcatgttatctccctcaaaaccagagatgggaacaaatggaattttgtctgg |
105 |
Q |
| |
|
|||||||||| |||||| ||||||||||||| || | |||| |||| || |||||||||||||| |||||||||| || | ||| |||||||| |||| |
|
|
| T |
1846417 |
caagaagggtgggacccgtgtaccagtcaaggttagaagagtgctcaatgatgttatctccctcgtaaccagagatagggataaaaggaattttacctgg |
1846516 |
T |
|
| Q |
106 |
gttatagccaaccttcttcaaataggatgaaacttccttcacaatttcttcatacctacccttcgagtacttaggtgtagtggcatccatct |
197 |
Q |
| |
|
|||||||||||||| ||||| ||| ||||| || ||||||||| |||||||||| |||| ||||| || ||||||||||||||||||| |
|
|
| T |
1846517 |
gttatagccaacctcgctcaaaaagggtgaaatttgactcacaatttgttcatacctatccttggagtatttgggtgtagtggcatccatct |
1846608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 444 - 582
Target Start/End: Complemental strand, 4787426 - 4787289
Alignment:
| Q |
444 |
atcatgttcttaatgaaatccctgtgtccgggggcatcaatgacagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtggata |
543 |
Q |
| |
|
||||||||| ||||| | |||||||||||||| ||||||||||||||||||| |||||| | ||||||||||| ||| || |||||||||||||| | |
|
|
| T |
4787426 |
atcatgttcctaatgtattccctgtgtccgggagcatcaatgacagtgcagttgtacttgtttgtctcaaacttggacatagaaatgtcaattgtgg-ca |
4787328 |
T |
|
| Q |
544 |
cctctttcacgttcagccttgagcttgtcgagcacccaa |
582 |
Q |
| |
|
||||||||||| ||| ||||||| ||||| ||||||||| |
|
|
| T |
4787327 |
cctctttcacgctcacccttgagtttgtcaagcacccaa |
4787289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 6 - 120
Target Start/End: Complemental strand, 4787762 - 4787648
Alignment:
| Q |
6 |
caagaagggtaggacccttgtaccagtcaagatttgtagagcgctcgatcatgttatctccctcaaaaccagagatgggaacaaatggaattttgtctgg |
105 |
Q |
| |
|
|||||||||| |||||| | |||||||||| ||| || ||||| || |||| ||||||||| ||||||| ||||||||||||||||||||||| | ||| |
|
|
| T |
4787762 |
caagaagggtcggacccatttaccagtcaaaattagtggagcggtcaatcaagttatctccatcaaaactagagatgggaacaaatggaatttcatttgg |
4787663 |
T |
|
| Q |
106 |
gttatagccaacctt |
120 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
4787662 |
gttatagccaacctt |
4787648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 284 - 397
Target Start/End: Complemental strand, 4787536 - 4787429
Alignment:
| Q |
284 |
aaataccttgttgcagcaacgaatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggcttca |
383 |
Q |
| |
|
|||||||||||||||||| | ||||||||||||||||||| |||||| ||||||||||| |||||| ||||||| |||| | |||||||||||| |
|
|
| T |
4787536 |
aaataccttgttgcagcagcagatcatttgcttcacaccaacagtgaaggcaagaagagcatgttcaagggtctgaccattc------ataccggcttca |
4787443 |
T |
|
| Q |
384 |
aaaccaccggtagt |
397 |
Q |
| |
|
|||||||| ||||| |
|
|
| T |
4787442 |
aaaccaccagtagt |
4787429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 131; Significance: 1e-67; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 287 - 581
Target Start/End: Complemental strand, 7519792 - 7519499
Alignment:
| Q |
287 |
taccttgttgcagcaacgaatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggcttcaaaa |
386 |
Q |
| |
|
||||||||| || |||| ||||| |||||||| |||||||| || ||||||||||| || ||||||||||| |||||||| || ||||| ||||||||| |
|
|
| T |
7519792 |
taccttgttacaacaacagatcatctgcttcactccaagagtaaatgcaagaagagcatgctcacgggtctgtccatccttagagataccagcttcaaaa |
7519693 |
T |
|
| Q |
387 |
ccaccggtagtggaatcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaatga |
486 |
Q |
| |
|
||||| || ||||| |||||||| || |||||||||||||| ||||| |||||||||||||||||||| |||||||| | |||||||| |||||||||| |
|
|
| T |
7519692 |
ccaccagtggtggagtcaatgataaggacagcacaatcagcctgggaggttccagtaatcatgttcttgatgaaatcacgatgtccgggagcatcaatga |
7519593 |
T |
|
| Q |
487 |
cagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtggatacctctttcacgttcagccttgagcttgtcgagcaccca |
581 |
Q |
| |
|
| |||||||||||||| || |||||||| ||||||| |||||| ||||| || || ||||||||||| |||||||| |||||||| || ||||| |
|
|
| T |
7519592 |
ctgtgcagtagtacttggtggtctcaaatttccacaaagcaatatcaatggt-aattcctctttcacgctcagccttaagcttgtcaagaaccca |
7519499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 287 - 581
Target Start/End: Complemental strand, 7529163 - 7528870
Alignment:
| Q |
287 |
taccttgttgcagcaacgaatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggcttcaaaa |
386 |
Q |
| |
|
||||||||| || |||| ||||| |||||||| |||||||| || |||||||||||||| ||||||||||| |||||||| || ||||| ||||||||| |
|
|
| T |
7529163 |
taccttgttacaacaacagatcatctgcttcactccaagagtaaatgcaagaagagcgtgctcacgggtctgtccatccttagagataccagcttcaaaa |
7529064 |
T |
|
| Q |
387 |
ccaccggtagtggaatcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaatga |
486 |
Q |
| |
|
||||| || ||||| |||||||| || || ||||||||||| ||||| |||||||||||||||||||| |||||||| | |||||||| |||||||||| |
|
|
| T |
7529063 |
ccaccagtggtggagtcaatgataagcacggcacaatcagcctgggaggttccagtaatcatgttcttgatgaaatcacgatgtccgggagcatcaatga |
7528964 |
T |
|
| Q |
487 |
cagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtggatacctctttcacgttcagccttgagcttgtcgagcaccca |
581 |
Q |
| |
|
| |||||||||||||| || |||||||| ||||||| ||||| || || || || ||||||||||| |||||||| || ||||| || ||||| |
|
|
| T |
7528963 |
ctgtgcagtagtacttggtggtctcaaatttccacaaggcaatatcgatggt-aattcctctttcacgctcagccttaagtttgtcaagaaccca |
7528870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 20 - 198
Target Start/End: Complemental strand, 7520060 - 7519882
Alignment:
| Q |
20 |
cccttgtaccagtcaagatttgtagagcgctcgatcatgttatctccctcaaaaccagagatgggaacaaatggaattttgtctgggttatagccaacct |
119 |
Q |
| |
|
||||||||||||||||| || ||||| | ||| |||||||| || || |||||||||||||| ||||||||||| |||||||||||||| || ||||||| |
|
|
| T |
7520060 |
cccttgtaccagtcaaggttggtagacctctcaatcatgttgtcaccttcaaaaccagagattggaacaaatgggattttgtctgggttgtaaccaacct |
7519961 |
T |
|
| Q |
120 |
tcttcaaataggatgaaacttccttcacaatttcttcatacctacccttcgagtacttaggtgtagtggcatccatctg |
198 |
Q |
| |
|
||||||| |||||||||||||||||||| ||||| || |||||| |||| |||||||| || || || ||||||||||| |
|
|
| T |
7519960 |
tcttcaagtaggatgaaacttccttcacgatttcatcgtacctagcctttgagtacttgggggtggtagcatccatctg |
7519882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 20 - 198
Target Start/End: Complemental strand, 7529597 - 7529419
Alignment:
| Q |
20 |
cccttgtaccagtcaagatttgtagagcgctcgatcatgttatctccctcaaaaccagagatgggaacaaatggaattttgtctgggttatagccaacct |
119 |
Q |
| |
|
||||||||||||||||| || || || | ||| |||||||| || || ||||| || ||||||||||||||||| |||||||| ||||| || ||||||| |
|
|
| T |
7529597 |
cccttgtaccagtcaaggttggtggacctctcaatcatgttgtcaccttcaaatccggagatgggaacaaatgggattttgtcagggttgtaaccaacct |
7529498 |
T |
|
| Q |
120 |
tcttcaaataggatgaaacttccttcacaatttcttcatacctacccttcgagtacttaggtgtagtggcatccatctg |
198 |
Q |
| |
|
||||||| |||||||||||||||||||| ||||| || |||||| |||| |||||||| || || || ||||||||||| |
|
|
| T |
7529497 |
tcttcaagtaggatgaaacttccttcacgatttcatcgtacctagcctttgagtacttgggggtggtagcatccatctg |
7529419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 120; Significance: 4e-61; HSPs: 8)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 284 - 582
Target Start/End: Original strand, 34691036 - 34691331
Alignment:
| Q |
284 |
aaataccttgttgcagcaacgaatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggcttca |
383 |
Q |
| |
|
|||||||||||||||||| | ||||||||| |||||||||||||||| ||||||||||| ||||| | |||||| |||| ||| || ||| ||| |
|
|
| T |
34691036 |
aaataccttgttgcagcagcagatcatttgcctcacaccaagagtgaaggcaagaagagcatgttcccaggtctgaccattcttagaccaaccagctcgc |
34691135 |
T |
|
| Q |
384 |
aaaccaccggtagtggaatcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaa |
483 |
Q |
| |
|
||||| | ||||| |||||||||| ||||||||||| ||||||||||| || || || |||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
34691136 |
aaacctctagtagtcgaatcaatgacgagaacagcacagtcagcttgggaggtcccggtgatcatgttcttaatgaaatccctgtgtccgggagcatcaa |
34691235 |
T |
|
| Q |
484 |
tgacagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtggatacctctttcacgttcagccttgagcttgtcgagcacccaa |
582 |
Q |
| |
|
||| |||| || ||||||| || ||||||||||| || ||| |||||||||||| ||||||||||||||| ||||| ||||||||||| ||||||||| |
|
|
| T |
34691236 |
tgagagtgaagcagtacttggttgtctcaaacttgcataga--aatgtcaattgt-gatacctctttcacgctcagcgttgagcttgtcaagcacccaa |
34691331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 284 - 582
Target Start/End: Original strand, 34713448 - 34713743
Alignment:
| Q |
284 |
aaataccttgttgcagcaacgaatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggcttca |
383 |
Q |
| |
|
|||||||||||||||||| | ||||||||| |||||||||||||||| ||||||||||| ||||| | |||||| |||| ||| || ||| ||| |
|
|
| T |
34713448 |
aaataccttgttgcagcagcagatcatttgcctcacaccaagagtgaaggcaagaagagcatgttcccaggtctgaccattcttagaccaaccagctcgc |
34713547 |
T |
|
| Q |
384 |
aaaccaccggtagtggaatcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaa |
483 |
Q |
| |
|
||||| | ||||| |||||||||| ||||||||||| ||||||||||| || || || |||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
34713548 |
aaacctctagtagtcgaatcaatgacgagaacagcacagtcagcttgggaggtcccggtgatcatgttcttaatgaaatccctgtgtccgggagcatcaa |
34713647 |
T |
|
| Q |
484 |
tgacagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtggatacctctttcacgttcagccttgagcttgtcgagcacccaa |
582 |
Q |
| |
|
||| |||| || ||||||| || ||||||||||| || ||| |||||||||||| ||||||||||||||| ||||| ||||||||||| ||||||||| |
|
|
| T |
34713648 |
tgagagtgaagcagtacttggttgtctcaaacttgcataga--aatgtcaattgt-gatacctctttcacgctcagcgttgagcttgtcaagcacccaa |
34713743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 285 - 582
Target Start/End: Original strand, 16232380 - 16232680
Alignment:
| Q |
285 |
aataccttgttgcagcaacgaatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggcttcaa |
384 |
Q |
| |
|
||||||||||||||||| | ||||||||| |||||||||||||| | ||||| ||||| ||||| | |||||| |||||||| || ||| |||| | |
|
|
| T |
16232380 |
aataccttgttgcagcagcagatcatttgcctcacaccaagagtgtacgcaagtagagcatgttcccaggtctgaccatccttagaccaaccagcttgca |
16232479 |
T |
|
| Q |
385 |
aaccaccggtagtggaatcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaa----tgaaatccctgtgtccgggggcat |
480 |
Q |
| |
|
|||| |||||||||| |||| ||||||||||| ||||||| ||| || || | ||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
16232480 |
aaccgagagtagtggaattgatgactagaacagcacagtcagcttcggaggtcccgatgatcatgttcttaattaatgaaatccctgtgtccgggggcat |
16232579 |
T |
|
| Q |
481 |
caatgacagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtggatacctctttcacgttcagccttgagcttgtcgagcaccc |
580 |
Q |
| |
|
|||||| ||||| ||||||| || ||||||||||| |||| | |||||||||||| ||||||||||||||| ||||||||||||||||| ||||||| |
|
|
| T |
16232580 |
caatgagggtgcaacagtacttggttgtctcaaacttgcacatggaaatgtcaattgt-gatacctctttcacgctcagccttgagcttgtcaagcaccc |
16232678 |
T |
|
| Q |
581 |
aa |
582 |
Q |
| |
|
|| |
|
|
| T |
16232679 |
aa |
16232680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 6 - 116
Target Start/End: Original strand, 33860769 - 33860879
Alignment:
| Q |
6 |
caagaagggtaggacccttgtaccagtcaagatttgtagagcgctcgatcatgttatctccctcaaaaccagagatgggaacaaatggaattttgtctgg |
105 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||| | |
|
|
| T |
33860769 |
caagaagggtgggacccttgtaccagtcaagattagtagagcgctcaatcaagttatctccctcaaaaccagagatgggaacaaatggaactttgtctag |
33860868 |
T |
|
| Q |
106 |
gttatagccaa |
116 |
Q |
| |
|
||||||||||| |
|
|
| T |
33860869 |
gttatagccaa |
33860879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 6 - 198
Target Start/End: Original strand, 34690774 - 34690966
Alignment:
| Q |
6 |
caagaagggtaggacccttgtaccagtcaagatttgtagagcgctcgatcatgttatctccctcaaaaccagagatgggaacaaatggaattttgtctgg |
105 |
Q |
| |
|
|||||||||||||||| | |||||||||||| || || |||||||| || ||||||||||||| | |||||||||||||||||||||||||||| |||| |
|
|
| T |
34690774 |
caagaagggtaggaccttcgtaccagtcaaggttagtcgagcgctcaatgatgttatctcccttataaccagagatgggaacaaatggaattttatctgt |
34690873 |
T |
|
| Q |
106 |
gttatagccaaccttcttcaaataggatgaaacttccttcacaatttcttcatacctacccttcgagtacttaggtgtagtggcatccatctg |
198 |
Q |
| |
|
|||||| |||| | || ||||| || ||||| | ||||||||||| |||||||||| |||| ||||| || |||||| ||||||||||||| |
|
|
| T |
34690874 |
gttataaccaatcctcatcaaagcgggtgaaattcccttcacaattagttcatacctatccttggagtatttgggtgtaatggcatccatctg |
34690966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 6 - 198
Target Start/End: Original strand, 34713186 - 34713378
Alignment:
| Q |
6 |
caagaagggtaggacccttgtaccagtcaagatttgtagagcgctcgatcatgttatctccctcaaaaccagagatgggaacaaatggaattttgtctgg |
105 |
Q |
| |
|
|||||||||||||||| | |||||||||||| || || |||||||| || ||||||||||||| | |||||||||||||||||||||||||||| |||| |
|
|
| T |
34713186 |
caagaagggtaggaccttcgtaccagtcaaggttagtcgagcgctcaatgatgttatctcccttataaccagagatgggaacaaatggaattttatctgt |
34713285 |
T |
|
| Q |
106 |
gttatagccaaccttcttcaaataggatgaaacttccttcacaatttcttcatacctacccttcgagtacttaggtgtagtggcatccatctg |
198 |
Q |
| |
|
|||||| |||| | || ||||| || ||||| | ||||||||||| |||||||||| |||| ||||| || |||||| ||||||||||||| |
|
|
| T |
34713286 |
gttataaccaatcctcatcaaagcgggtgaaattcccttcacaattagttcatacctatccttggagtatttgggtgtaatggcatccatctg |
34713378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 284 - 582
Target Start/End: Original strand, 33861045 - 33861342
Alignment:
| Q |
284 |
aaataccttgttgcagcaacgaatcatttgcttcacaccaagagtgaaagcaagaagagcgtgttcacgggtctgcccatcctttgaaataccggcttca |
383 |
Q |
| |
|
||||||||||||| ||| | |||||||| ||||||||||||| | || ||||| || |||||||||||||| |||| ||| |||| ||| ||||| |
|
|
| T |
33861045 |
aaataccttgttgatgcagcagatcatttgaggcacaccaagagtgcaggcgagaagggcatgttcacgggtctgaccatgcttagaaaaaccaacttca |
33861144 |
T |
|
| Q |
384 |
aaaccaccggtagtggaatcaatgatcagaacagcacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaa |
483 |
Q |
| |
|
|||||||| | || |||||||| ||| |||| ||| |||||||| | |||||| ||| |||||||||||||||| ||||||||||||| |||||||||| |
|
|
| T |
33861145 |
aaaccaccaggagaggaatcaacgataagaagagcgcaatcagcataggatgtcccattaatcatgttcttaatataatccctgtgtccaggggcatcaa |
33861244 |
T |
|
| Q |
484 |
tgacagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtggatacctctttcacgttcagccttgagcttgtcgagcacccaa |
582 |
Q |
| |
|
|||||||| | ||||| | |||||||| || | || || || ||||| || ||||||||||||||| ||||||| ||||||||| || |||||| |
|
|
| T |
33861245 |
tgacagtgtaccggtactggtttgtctcaaaattacgcatagaaacgtcaa-tggagatacctctttcacgctcagcctcgagcttgtcaagaacccaa |
33861342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 26 - 199
Target Start/End: Original strand, 16232135 - 16232308
Alignment:
| Q |
26 |
taccagtcaagatttgtagagcgctcgatcatgttatctccctcaaaaccagagatgggaacaaatggaattttgtctgggttatagccaaccttcttca |
125 |
Q |
| |
|
||||||||||| || ||||||||||| | |||||||||| || ||||||||||||||||||||||||||| | || | |||||| |||| | || ||| |
|
|
| T |
16232135 |
taccagtcaaggttagtagagcgctcaacgatgttatctcacttaaaaccagagatgggaacaaatggaatatcatcagcgttataaccaatcctcgtca |
16232234 |
T |
|
| Q |
126 |
aataggatgaaacttccttcacaatttcttcatacctacccttcgagtacttaggtgtagtggcatccatctgt |
199 |
Q |
| |
|
|| || ||||||| ||||||||||| ||||||| || |||| ||||| || ||||||||||||| ||||||| |
|
|
| T |
16232235 |
aagcgggtgaaactcccttcacaattacttcatatctgtccttggagtatttcggtgtagtggcattcatctgt |
16232308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 78; Significance: 5e-36; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 6 - 127
Target Start/End: Complemental strand, 39242621 - 39242500
Alignment:
| Q |
6 |
caagaagggtaggacccttgtaccagtcaagatttgtagagcgctcgatcatgttatctccctcaaaaccagagatgggaacaaatggaattttgtctgg |
105 |
Q |
| |
|
|||||||||| |||| ||||||||||||| ||| ||||||||||| |||| ||||||||| | |||||||||||||||||||||| || |||||||||| |
|
|
| T |
39242621 |
caagaagggtgggactgttgtaccagtcaatattagtagagcgctcaatcaagttatctccgttaaaaccagagatgggaacaaatcgagttttgtctgg |
39242522 |
T |
|
| Q |
106 |
gttatagccaaccttcttcaaa |
127 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
39242521 |
gttatagccaaccttcttcaaa |
39242500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 478 - 539
Target Start/End: Complemental strand, 39242214 - 39242153
Alignment:
| Q |
478 |
catcaatgacagtgcagtagtacttagtagtctcaaacttccacagagcaatgtcaattgtg |
539 |
Q |
| |
|
||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||| |
|
|
| T |
39242214 |
catcaatgacagtgcagtagtactttgttgtctcaaacttggacagagcaatgtcaattgtg |
39242153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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